View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9150_low_82 (Length: 221)
Name: NF9150_low_82
Description: NF9150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9150_low_82 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13147159 - 13147378
Alignment:
| Q |
1 |
atttttgggaagacagaaggtactgatattattgaatctcaacaagtcaaagtagagcctaatatggccatgggattattaagatccttatgggaaatgt |
100 |
Q |
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| T |
13147159 |
atttttgggaagacagaaggtactgatattaatgaatctcgacaagtcaaagtagagcctaatatggccatgggattattaagatccttatgggaaatgt |
13147258 |
T |
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| Q |
101 |
agcaggaaaatgttgatgttgatgaagcaattccttttcaag-aaagtacatcaatttataaggatgataaatcctgtcaaaaacaaaatattcattgag |
199 |
Q |
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| T |
13147259 |
agcaggaaaatgttgatgttgatgaagcaattccttttcaagaaaagtacataaatttataaggatgataaatcctgtcaaaaacataatattgattgag |
13147358 |
T |
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| Q |
200 |
accaatcttatgttgttaaa |
219 |
Q |
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|||||||||||||||||||| |
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| T |
13147359 |
accaatcttatgttgttaaa |
13147378 |
T |
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