View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9157_high_1 (Length: 333)
Name: NF9157_high_1
Description: NF9157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9157_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 2 - 317
Target Start/End: Original strand, 10632142 - 10632457
Alignment:
| Q |
2 |
gcagagaaaggttactggggccataaaagctggtatgatgggccaggcagggctaagaccacaagctgttgcagagaacatgaatcctcatcaagccaga |
101 |
Q |
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| T |
10632142 |
gcagagaaaggttactggggccataaaagctggtatgatgggccaggcagggctaagaccacaagctgttgcagagaacatgaatcctcatcaagccaga |
10632241 |
T |
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| Q |
102 |
gttgatcgtgttcataatatagaggctcctttagaacaacaaatacatgatgaactttgatacatttccaataaatggtgttgtgttgtccgcaattatt |
201 |
Q |
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| T |
10632242 |
gttgatcgtgttcataatatagaggctcctttagaacaacaaatacatgatgaactttgatacatttccaataaatggtgttgtgttgtccgcaattatt |
10632341 |
T |
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| Q |
202 |
tacattaagagatatcgtttaccttcacacacaactttagcacccttccgattgcttaaaatgaaaagtttttatcatcttgagagttgaaaagccatgt |
301 |
Q |
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| T |
10632342 |
tacattaagagatatcgtttaccttcacacacaactttagcacccttccgattgcttaaaatgaaaagtctttatcatcttgagagttgaaaagccatgt |
10632441 |
T |
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| Q |
302 |
ggtacctttctaatta |
317 |
Q |
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| T |
10632442 |
ggtacctttctaatta |
10632457 |
T |
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