View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9161_low_21 (Length: 361)

Name: NF9161_low_21
Description: NF9161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9161_low_21
NF9161_low_21
[»] chr1 (39 HSPs)
chr1 (39-269)||(1950222-1950458)
chr1 (169-281)||(23021684-23021800)
chr1 (39-279)||(27536297-27536534)
chr1 (169-278)||(28111300-28111413)
chr1 (169-279)||(2794471-2794585)
chr1 (186-278)||(20448093-20448189)
chr1 (186-278)||(20533860-20533956)
chr1 (169-285)||(49498261-49498381)
chr1 (52-134)||(21434383-21434464)
chr1 (192-278)||(31205104-31205194)
chr1 (39-278)||(45960512-45960747)
chr1 (169-260)||(20399097-20399192)
chr1 (97-178)||(27354810-27354889)
chr1 (169-279)||(6070724-6070838)
chr1 (169-220)||(2405763-2405815)
chr1 (53-122)||(16056720-16056790)
chr1 (169-281)||(45941670-45941788)
chr1 (50-122)||(16060886-16060959)
chr1 (169-220)||(21110976-21111028)
chr1 (169-220)||(41058120-41058172)
chr1 (169-220)||(42022882-42022934)
chr1 (169-220)||(49852956-49853008)
chr1 (169-270)||(3796602-3796707)
chr1 (50-122)||(16062132-16062205)
chr1 (52-119)||(34065082-34065151)
chr1 (39-278)||(37183631-37183866)
chr1 (39-138)||(6070856-6070956)
chr1 (39-117)||(31204959-31205038)
chr1 (127-178)||(672936-672987)
chr1 (115-178)||(905552-905614)
chr1 (50-122)||(16055485-16055558)
chr1 (39-78)||(29643185-29643224)
chr1 (53-122)||(7635782-7635849)
chr1 (39-124)||(20398974-20399060)
chr1 (39-109)||(45941537-45941607)
chr1 (316-345)||(30545984-30546013)
chr1 (39-122)||(3796746-3796829)
chr1 (39-107)||(21018402-21018470)
chr1 (41-109)||(41058235-41058303)
[»] chr5 (43 HSPs)
chr5 (43-280)||(42063045-42063289)
chr5 (39-278)||(22936707-22936940)
chr5 (169-280)||(43491999-43492114)
chr5 (169-278)||(41876521-41876634)
chr5 (169-278)||(31863958-31864072)
chr5 (174-281)||(41306290-41306401)
chr5 (39-220)||(21332503-21332683)
chr5 (39-220)||(21335522-21335701)
chr5 (169-271)||(40915931-40916037)
chr5 (115-182)||(26292982-26293048)
chr5 (39-112)||(14375723-14375798)
chr5 (169-269)||(26752477-26752581)
chr5 (169-278)||(34832016-34832131)
chr5 (169-278)||(37215288-37215396)
chr5 (39-134)||(4099426-4099520)
chr5 (39-278)||(14015906-14016141)
chr5 (169-220)||(30066563-30066615)
chr5 (52-112)||(31575550-31575609)
chr5 (39-178)||(22131349-22131485)
chr5 (39-134)||(7625222-7625318)
chr5 (39-181)||(17664670-17664809)
chr5 (132-178)||(26907285-26907331)
chr5 (169-220)||(7271270-7271322)
chr5 (131-178)||(11959061-11959108)
chr5 (115-174)||(23044334-23044392)
chr5 (39-78)||(31863834-31863873)
chr5 (125-182)||(12088158-12088215)
chr5 (125-182)||(34132848-34132905)
chr5 (125-182)||(34143079-34143136)
chr5 (169-220)||(4099354-4099406)
chr5 (169-220)||(28787148-28787200)
chr5 (169-278)||(32838121-32838235)
chr5 (169-220)||(33552373-33552425)
chr5 (115-178)||(26895470-26895532)
chr5 (52-122)||(21915256-21915324)
chr5 (100-134)||(33320820-33320854)
chr5 (169-218)||(39192582-39192632)
chr5 (125-178)||(17748640-17748693)
chr5 (115-156)||(20056034-20056074)
chr5 (222-270)||(12088259-12088307)
chr5 (220-264)||(23044443-23044487)
chr5 (220-264)||(35049762-35049806)
chr5 (39-107)||(41876699-41876767)
[»] chr3 (89 HSPs)
chr3 (39-220)||(10885061-10885244)
chr3 (39-220)||(52200117-52200295)
chr3 (39-269)||(16184445-16184677)
chr3 (39-121)||(55031904-55031986)
chr3 (39-121)||(55034764-55034846)
chr3 (41-278)||(35412716-35412946)
chr3 (43-269)||(24125707-24125931)
chr3 (43-269)||(24128984-24129208)
chr3 (39-219)||(43809784-43809963)
chr3 (39-278)||(7486775-7487013)
chr3 (169-279)||(2873892-2874006)
chr3 (169-278)||(539154-539267)
chr3 (169-278)||(12541053-12541166)
chr3 (169-269)||(43927177-43927281)
chr3 (169-278)||(2775822-2775935)
chr3 (169-278)||(2779064-2779177)
chr3 (43-268)||(8461257-8461473)
chr3 (169-280)||(54724069-54724184)
chr3 (169-278)||(23298366-23298480)
chr3 (169-278)||(30691063-30691177)
chr3 (52-123)||(19301412-19301482)
chr3 (39-134)||(54461219-54461316)
chr3 (169-269)||(6922848-6922952)
chr3 (43-269)||(10106362-10106586)
chr3 (39-124)||(18641674-18641762)
chr3 (39-124)||(18644670-18644758)
chr3 (183-278)||(50461303-50461402)
chr3 (39-178)||(37408885-37409021)
chr3 (43-178)||(54720179-54720312)
chr3 (52-124)||(19304595-19304666)
chr3 (169-278)||(11190854-11190967)
chr3 (40-178)||(17039875-17040011)
chr3 (39-182)||(22416686-22416824)
chr3 (97-178)||(25486395-25486474)
chr3 (39-220)||(28007884-28008061)
chr3 (97-218)||(31549453-31549571)
chr3 (169-251)||(28266246-28266332)
chr3 (174-278)||(18644523-18644628)
chr3 (115-177)||(34983646-34983707)
chr3 (169-269)||(53816157-53816261)
chr3 (169-279)||(6434526-6434643)
chr3 (125-182)||(12561077-12561134)
chr3 (39-178)||(17528617-17528751)
chr3 (169-269)||(45896718-45896826)
chr3 (169-278)||(49742661-49742776)
chr3 (39-182)||(52990904-52991042)
chr3 (169-220)||(10902277-10902329)
chr3 (169-220)||(20728450-20728502)
chr3 (39-178)||(17141612-17141748)
chr3 (174-243)||(18641559-18641632)
chr3 (39-178)||(35751645-35751780)
chr3 (39-108)||(10902144-10902213)
chr3 (39-122)||(47051700-47051784)
chr3 (39-117)||(50461459-50461538)
chr3 (50-124)||(539042-539118)
chr3 (169-220)||(10881817-10881869)
chr3 (169-220)||(16244210-16244262)
chr3 (169-235)||(25585014-25585084)
chr3 (39-78)||(6434729-6434768)
chr3 (39-124)||(11190731-11190818)
chr3 (222-281)||(25442610-25442668)
chr3 (39-134)||(52309511-52309605)
chr3 (39-124)||(53816032-53816119)
chr3 (39-109)||(16244077-16244147)
chr3 (39-109)||(20728567-20728637)
chr3 (169-249)||(28327694-28327778)
chr3 (169-249)||(28331019-28331103)
chr3 (39-109)||(29343794-29343864)
chr3 (39-109)||(45896585-45896655)
chr3 (220-278)||(48063791-48063848)
chr3 (169-203)||(52309455-52309489)
chr3 (125-178)||(17531512-17531565)
chr3 (52-125)||(22783819-22783892)
chr3 (52-125)||(22788183-22788256)
chr3 (39-124)||(22993602-22993686)
chr3 (125-178)||(25442716-25442769)
chr3 (245-278)||(28266338-28266371)
chr3 (125-182)||(32366982-32367039)
chr3 (39-107)||(2775686-2775754)
chr3 (39-107)||(2778929-2778997)
chr3 (220-264)||(15195109-15195153)
chr3 (239-279)||(22993449-22993489)
chr3 (39-107)||(25584881-25584949)
chr3 (42-78)||(27092101-27092137)
chr3 (180-215)||(31857913-31857949)
chr3 (222-270)||(32366890-32366938)
chr3 (220-264)||(34983554-34983598)
chr3 (169-220)||(41977338-41977390)
chr3 (220-264)||(46885299-46885343)
[»] chr4 (67 HSPs)
chr4 (39-278)||(18911617-18911861)
chr4 (43-220)||(37103036-37103215)
chr4 (39-279)||(12238384-12238615)
chr4 (39-278)||(15432197-15432436)
chr4 (40-278)||(34319684-34319919)
chr4 (169-278)||(40902840-40902953)
chr4 (40-220)||(5681547-5681720)
chr4 (169-279)||(5673137-5673251)
chr4 (39-279)||(52530699-52530938)
chr4 (42-269)||(44808731-44808955)
chr4 (169-278)||(27014504-27014617)
chr4 (169-278)||(27676812-27676925)
chr4 (169-278)||(34017550-34017663)
chr4 (160-269)||(48637741-48637853)
chr4 (42-178)||(25962180-25962310)
chr4 (169-278)||(38283247-38283359)
chr4 (39-124)||(5706511-5706599)
chr4 (169-278)||(29325065-29325178)
chr4 (39-220)||(35510110-35510285)
chr4 (169-278)||(40616573-40616686)
chr4 (169-278)||(5670819-5670928)
chr4 (39-178)||(21419907-21420040)
chr4 (39-178)||(40493237-40493370)
chr4 (39-178)||(46955347-46955481)
chr4 (169-220)||(3720602-3720654)
chr4 (169-220)||(3797643-3797695)
chr4 (180-277)||(15445120-15445224)
chr4 (169-220)||(24043957-24044009)
chr4 (39-134)||(3797718-3797811)
chr4 (169-278)||(24150916-24151028)
chr4 (39-178)||(53009426-53009561)
chr4 (39-124)||(34017699-34017784)
chr4 (169-218)||(40795254-40795304)
chr4 (39-182)||(18672947-18673085)
chr4 (125-181)||(11195876-11195932)
chr4 (169-220)||(12786364-12786416)
chr4 (169-220)||(19820956-19821008)
chr4 (169-220)||(19827663-19827715)
chr4 (115-178)||(30392760-30392823)
chr4 (174-243)||(5706641-5706714)
chr4 (115-178)||(29544741-29544803)
chr4 (169-215)||(33408154-33408201)
chr4 (39-134)||(33408223-33408320)
chr4 (39-122)||(33927091-33927175)
chr4 (169-203)||(52005600-52005634)
chr4 (39-109)||(52006464-52006534)
chr4 (39-134)||(56195646-56195741)
chr4 (52-124)||(22172290-22172362)
chr4 (169-278)||(15429610-15429726)
chr4 (169-278)||(15436224-15436340)
chr4 (169-220)||(52006349-52006401)
chr4 (115-178)||(15164388-15164450)
chr4 (49-95)||(5677356-5677402)
chr4 (222-280)||(18672846-18672903)
chr4 (39-109)||(19827534-19827604)
chr4 (220-270)||(25962357-25962407)
chr4 (39-109)||(38283422-38283492)
chr4 (39-122)||(56198972-56199056)
chr4 (39-108)||(15445299-15445368)
chr4 (39-116)||(19820846-19820923)
chr4 (169-213)||(49270932-49270977)
chr4 (169-220)||(10386180-10386232)
chr4 (224-284)||(21420091-21420150)
chr4 (40-117)||(29324944-29325022)
chr4 (220-264)||(30392870-30392914)
chr4 (169-220)||(44165034-44165086)
chr4 (169-220)||(48415344-48415395)
[»] scaffold1785 (1 HSPs)
scaffold1785 (39-282)||(26-275)
[»] scaffold0035 (2 HSPs)
scaffold0035 (39-282)||(62636-62885)
scaffold0035 (115-178)||(64052-64114)
[»] chr7 (42 HSPs)
chr7 (42-286)||(2441041-2441283)
chr7 (39-220)||(48645580-48645758)
chr7 (169-269)||(4543036-4543140)
chr7 (169-278)||(13449551-13449664)
chr7 (169-269)||(4547108-4547212)
chr7 (169-278)||(23224675-23224788)
chr7 (169-265)||(37415206-37415306)
chr7 (169-279)||(8277226-8277339)
chr7 (169-278)||(6603687-6603800)
chr7 (39-178)||(20080590-20080726)
chr7 (169-278)||(11919623-11919739)
chr7 (39-278)||(16165855-16166090)
chr7 (55-122)||(5796676-5796742)
chr7 (169-269)||(45286848-45286952)
chr7 (39-176)||(14683318-14683452)
chr7 (39-182)||(26144378-26144516)
chr7 (169-220)||(4595832-4595884)
chr7 (169-220)||(26557738-26557790)
chr7 (169-220)||(35961339-35961391)
chr7 (39-269)||(45290259-45290488)
chr7 (115-178)||(3067849-3067911)
chr7 (40-277)||(13842747-13842983)
chr7 (39-122)||(11397973-11398057)
chr7 (169-220)||(4695720-4695772)
chr7 (169-220)||(10345415-10345467)
chr7 (115-174)||(9132639-9132697)
chr7 (115-178)||(10469324-10469386)
chr7 (39-138)||(13449683-13449784)
chr7 (170-220)||(17731060-17731111)
chr7 (39-279)||(26135898-26136136)
chr7 (58-150)||(18562428-18562520)
chr7 (125-178)||(37166021-37166074)
chr7 (169-220)||(9864566-9864618)
chr7 (169-220)||(22611556-22611608)
chr7 (239-278)||(18559979-18560018)
chr7 (43-124)||(45286990-45287073)
chr7 (39-109)||(4595947-4596017)
chr7 (44-134)||(9864640-9864729)
chr7 (39-109)||(11919803-11919873)
chr7 (169-249)||(44017576-44017660)
chr7 (229-278)||(13907569-13907617)
chr7 (39-103)||(20594369-20594433)
[»] chr2 (57 HSPs)
chr2 (39-220)||(25820672-25820850)
chr2 (169-278)||(30274536-30274649)
chr2 (169-279)||(8888860-8888974)
chr2 (39-134)||(26366035-26366131)
chr2 (169-278)||(11347662-11347775)
chr2 (39-269)||(24238469-24238700)
chr2 (168-278)||(10601076-10601190)
chr2 (46-215)||(25138761-25138928)
chr2 (40-178)||(22630943-22631079)
chr2 (169-278)||(25871008-25871121)
chr2 (169-278)||(25959457-25959570)
chr2 (39-178)||(37937090-37937223)
chr2 (169-269)||(45499135-45499239)
chr2 (97-269)||(24235256-24235428)
chr2 (169-276)||(25874405-25874516)
chr2 (39-278)||(33310768-33311003)
chr2 (169-278)||(42368466-42368580)
chr2 (169-267)||(29440719-29440821)
chr2 (39-178)||(3875388-3875524)
chr2 (115-178)||(17877281-17877344)
chr2 (169-269)||(9185201-9185305)
chr2 (39-134)||(31427449-31427545)
chr2 (169-278)||(40781706-40781822)
chr2 (39-182)||(16790623-16790761)
chr2 (169-220)||(43723934-43723986)
chr2 (169-278)||(37279445-37279557)
chr2 (169-278)||(38015742-38015855)
chr2 (169-269)||(9188429-9188533)
chr2 (169-281)||(43207648-43207759)
chr2 (125-178)||(12219980-12220033)
chr2 (125-178)||(23205354-23205407)
chr2 (125-178)||(23676958-23677011)
chr2 (169-220)||(6827005-6827057)
chr2 (97-185)||(9966229-9966315)
chr2 (39-134)||(5105828-5105922)
chr2 (169-236)||(5105942-5106013)
chr2 (169-220)||(13971730-13971782)
chr2 (114-178)||(16179313-16179376)
chr2 (169-220)||(26366148-26366200)
chr2 (131-182)||(1386290-1386341)
chr2 (39-124)||(9185341-9185428)
chr2 (39-134)||(13971804-13971898)
chr2 (39-124)||(37279593-37279680)
chr2 (39-109)||(15470559-15470629)
chr2 (39-124)||(25959606-25959692)
chr2 (39-109)||(31585874-31585944)
chr2 (220-278)||(40258905-40258962)
chr2 (169-249)||(40677556-40677640)
chr2 (39-109)||(40781573-40781643)
chr2 (39-109)||(43723801-43723871)
chr2 (39-122)||(45457263-45457347)
chr2 (180-220)||(13137133-13137174)
chr2 (169-217)||(31585762-31585811)
chr2 (39-117)||(38015620-38015699)
chr2 (125-178)||(40259009-40259062)
chr2 (220-264)||(16179427-16179471)
chr2 (220-264)||(22631126-22631170)
[»] chr8 (43 HSPs)
chr8 (39-220)||(5538598-5538776)
chr8 (169-279)||(23597447-23597561)
chr8 (39-283)||(18721047-18721284)
chr8 (169-278)||(10664191-10664303)
chr8 (115-278)||(8911837-8912003)
chr8 (169-279)||(16954015-16954129)
chr8 (169-278)||(25591245-25591359)
chr8 (169-278)||(18825655-18825768)
chr8 (39-178)||(44026960-44027096)
chr8 (43-163)||(17931101-17931219)
chr8 (169-266)||(5584211-5584312)
chr8 (169-269)||(20887784-20887889)
chr8 (39-134)||(22173832-22173926)
chr8 (39-220)||(23643936-23644112)
chr8 (39-280)||(31284790-31285030)
chr8 (169-220)||(5980120-5980172)
chr8 (169-259)||(18824181-18824275)
chr8 (39-134)||(45155175-45155272)
chr8 (39-124)||(16953893-16953979)
chr8 (39-182)||(23619230-23619367)
chr8 (114-178)||(2560742-2560805)
chr8 (97-177)||(12516319-12516397)
chr8 (169-220)||(14421982-14422034)
chr8 (169-278)||(22173700-22173812)
chr8 (115-178)||(33419845-33419906)
chr8 (55-134)||(43681776-43681857)
chr8 (39-122)||(14589540-14589624)
chr8 (43-122)||(33883268-33883349)
chr8 (52-136)||(4868383-4868466)
chr8 (39-117)||(18825811-18825890)
chr8 (169-220)||(12583260-12583312)
chr8 (39-78)||(36710600-36710639)
chr8 (169-215)||(43681707-43681754)
chr8 (220-278)||(10498016-10498073)
chr8 (39-109)||(20887651-20887721)
chr8 (39-108)||(5584330-5584399)
chr8 (52-125)||(5613635-5613708)
chr8 (97-174)||(13197031-13197106)
chr8 (39-117)||(18824318-18824397)
chr8 (220-264)||(2560852-2560896)
chr8 (39-112)||(25231197-25231274)
chr8 (39-122)||(25591398-25591482)
chr8 (169-220)||(30645721-30645773)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-278)||(293261-293374)
[»] chr6 (39 HSPs)
chr6 (169-278)||(30655701-30655814)
chr6 (52-134)||(24371352-24371433)
chr6 (169-282)||(1125498-1125615)
chr6 (169-278)||(9954206-9954319)
chr6 (169-269)||(23381946-23382050)
chr6 (169-270)||(26942208-26942313)
chr6 (169-269)||(3596555-3596659)
chr6 (169-279)||(11187962-11188078)
chr6 (169-269)||(23384526-23384630)
chr6 (169-271)||(5737836-5737942)
chr6 (169-259)||(11729116-11729210)
chr6 (169-270)||(2379474-2379579)
chr6 (39-182)||(18855890-18856028)
chr6 (97-185)||(22561022-22561108)
chr6 (39-182)||(7128420-7128558)
chr6 (52-124)||(23008195-23008267)
chr6 (52-124)||(23780097-23780169)
chr6 (169-220)||(23842617-23842669)
chr6 (169-269)||(11402503-11402608)
chr6 (39-134)||(17106519-17106613)
chr6 (125-178)||(4512679-4512732)
chr6 (220-269)||(24155139-24155188)
chr6 (169-220)||(10290228-10290280)
chr6 (39-173)||(13947139-13947268)
chr6 (169-220)||(23848025-23848077)
chr6 (39-122)||(9839316-9839397)
chr6 (220-279)||(19476304-19476362)
chr6 (169-269)||(23008302-23008409)
chr6 (169-269)||(23779955-23780062)
chr6 (115-178)||(26896126-26896188)
chr6 (222-279)||(13947317-13947373)
chr6 (125-178)||(19476204-19476257)
chr6 (125-178)||(24400381-24400434)
chr6 (125-182)||(28230798-28230855)
chr6 (169-220)||(3826650-3826702)
chr6 (222-270)||(7128602-7128650)
chr6 (222-278)||(28230899-28230954)
chr6 (39-107)||(30655565-30655633)
chr6 (232-280)||(34502657-34502704)
[»] scaffold0962 (1 HSPs)
scaffold0962 (40-278)||(3048-3284)
[»] scaffold0427 (1 HSPs)
scaffold0427 (169-277)||(3554-3666)
[»] scaffold1208 (1 HSPs)
scaffold1208 (168-269)||(425-530)
[»] scaffold0381 (1 HSPs)
scaffold0381 (169-278)||(5166-5279)
[»] scaffold0690 (1 HSPs)
scaffold0690 (39-278)||(7481-7715)
[»] scaffold0250 (1 HSPs)
scaffold0250 (175-278)||(19645-19752)
[»] scaffold0048 (2 HSPs)
scaffold0048 (39-182)||(15531-15669)
scaffold0048 (222-279)||(15713-15769)
[»] scaffold0218 (1 HSPs)
scaffold0218 (39-178)||(10528-10660)
[»] scaffold1063 (2 HSPs)
scaffold1063 (169-220)||(2739-2791)
scaffold1063 (39-85)||(2620-2666)
[»] scaffold0520 (2 HSPs)
scaffold0520 (169-218)||(8039-8089)
scaffold0520 (169-220)||(1367-1419)
[»] scaffold0412 (1 HSPs)
scaffold0412 (169-278)||(374-491)
[»] scaffold0066 (1 HSPs)
scaffold0066 (115-185)||(57449-57518)
[»] scaffold0126 (1 HSPs)
scaffold0126 (39-178)||(14188-14322)
[»] scaffold0056 (1 HSPs)
scaffold0056 (105-178)||(65191-65263)
[»] scaffold0034 (1 HSPs)
scaffold0034 (52-136)||(48311-48394)
[»] scaffold1755 (1 HSPs)
scaffold1755 (169-220)||(385-437)
[»] scaffold0233 (1 HSPs)
scaffold0233 (52-136)||(10073-10156)
[»] scaffold0080 (2 HSPs)
scaffold0080 (169-220)||(27363-27415)
scaffold0080 (39-109)||(27228-27298)
[»] scaffold0065 (2 HSPs)
scaffold0065 (115-175)||(58551-58610)
scaffold0065 (203-259)||(58463-58522)
[»] scaffold0002 (2 HSPs)
scaffold0002 (52-124)||(99155-99226)
scaffold0002 (52-124)||(118365-118436)
[»] scaffold0191 (1 HSPs)
scaffold0191 (115-178)||(4107-4169)
[»] scaffold1809 (1 HSPs)
scaffold1809 (169-217)||(317-366)
[»] scaffold0807 (1 HSPs)
scaffold0807 (220-264)||(1850-1894)
[»] scaffold0007 (2 HSPs)
scaffold0007 (169-220)||(248772-248824)
scaffold0007 (39-109)||(248637-248707)
[»] scaffold0009 (1 HSPs)
scaffold0009 (115-174)||(242264-242322)
[»] scaffold0270 (1 HSPs)
scaffold0270 (40-78)||(27-65)
[»] scaffold0015 (2 HSPs)
scaffold0015 (39-109)||(198266-198336)
scaffold0015 (180-220)||(198407-198448)
[»] scaffold0084 (1 HSPs)
scaffold0084 (125-178)||(19480-19533)
[»] scaffold0038 (2 HSPs)
scaffold0038 (125-182)||(31295-31352)
scaffold0038 (222-278)||(31396-31451)
[»] scaffold0757 (1 HSPs)
scaffold0757 (169-220)||(5604-5656)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 5e-87; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 39 - 269
Target Start/End: Complemental strand, 1950458 - 1950222
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatatttt-ccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    ||||||||| |||||||||||||||||||||||||||||   ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  1950458 ggggaacatagatgattcgaaagacctagtctcatctcttatatatatttttccaaaactatctttattttctgttatttacttttattgcaatcaaacc 1950359  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatt 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||    
T  1950358 aatcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatt 1950259  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaa 269  Q
    ||||| ||||| ||||||||||||||| |||||||||    
T  1950258 tttactacttcgatagtatttagtacacttgctaaaa 1950222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 23021800 - 23021684
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||| ||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  23021800 tttatacatcctaaatatttacttgattgctaaattgagattaacagagtcctcatgggaacgatatttttactacttcgatagtatttagtacacttgc 23021701  T
Q  265 taaaatatctatcagta 281  Q
    |||||||||||||||||    
T  23021700 taaaatatctatcagta 23021684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 279
Target Start/End: Complemental strand, 27536534 - 27536297
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| ||||||||||||||||||||  |||||||||| |    
T  27536534 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttatttactttttatgcaatcaaaac 27536436  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatt 232  Q
     |    || ||| | |||| |  ||||||| ||| | ||||| |||||||| || |||||||||||| ||||||||||||||||| |   ||||||||||    
T  27536435 ta----ctgcctcg-ggcact--aaaagaaattt-acacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgtgaacgatatt 27536344  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  27536343 tttactacttcgatagtatttagtacacttgctaaaatatctatcag 27536297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 28111300 - 28111413
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  28111300 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 28111399  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  28111400 taaaatatctatca 28111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 2794471 - 2794585
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  2794471 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 2794570  T
Q  265 taaaatatctatcag 279  Q
    ||||| |||||||||    
T  2794571 taaaagatctatcag 2794585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 20448093 - 20448189
Alignment:
Q  186 tttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  20448093 tttactttattgctaaattgagattaacacagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 20533860 - 20533956
Alignment:
Q  186 tttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  20533860 tttactttattgctaaattgagattaacacagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 285
Target Start/End: Complemental strand, 49498381 - 49498261
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| ||||||||||| |||||||||||| |||||||||||| ||||   ||||||||||||||||| ||||| | ||||||||||||  ||||    
T  49498381 tttacacatcctaaatatttaccttattgctaaattgagattaacacaatcctcgtgggaacgatatttttactacttcgacagtatttagtacgcttgc 49498282  T
Q  265 taaaatatctatcagtaatca 285  Q
    |||||||||||||||| ||||    
T  49498281 taaaatatctatcagtgatca 49498261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 21434464 - 21434383
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    |||||||| |||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| ||||| ||||||||||    
T  21434464 gattcgaatgacctagtctcatctctccatatattttccaagcaaatctttactttctgttatttaatttta-tgcaatcaaa 21434383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 31205104 - 31205194
Alignment:
Q  192 ttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| |||| |||||||||||||    
T  31205104 ttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcaatagtatttggtacacttgccaaaatatctatca 31205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 45960747 - 45960512
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| |||||||||||||||  ||||| ||||||||| |    
T  45960747 ggggaacatcgatgattcgaaagacctgatctcatctctcttcttgtcttttccaaaactatctt-attttctgttatttaaatttat-gcaatcaaaac 45960650  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
     |    || ||| | |||| |  ||||||| ||| | ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||    
T  45960649 ta----ctgcctcg-ggcact--aaaagaaattt-acacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 45960558  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||||||||| ||||| |||| ||||| |||||||    
T  45960557 tttactacttcgatagtatttggtacacttgccaaaatttctatca 45960512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 20399097 - 20399192
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacat 260  Q
    |||| ||||| || ||||| ||||||||||||||| |||||||||||||| ||   ||||||||||||||||| ||||| ||||||||||||||||    
T  20399097 tttacacatcctagatattaactttattgctaaattgagattaacacagttctcgtgggaacgatatttttactacttccatagtatttagtacat 20399192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 27354889 - 27354810
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||||||||| ||| |||||||| |||| |||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  27354889 atctttattttctgtcatt-acttttat-gcaaacaaatcaatcaactgcctagtggcaaatcaaaagaacttttatacatc 27354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 6070838 - 6070724
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||| |||   |||||||||| ||||||  ||||| |||   |||| |||| ||||    
T  6070838 tttatacatcctaaatatttactttatttctaaattgagattaacacaatccttgtgggaacgatgtttttattacttcgatacgttttattacacttgc 6070739  T
Q  265 taaaatatctatcag 279  Q
    |||||||||||||||    
T  6070738 taaaatatctatcag 6070724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 2405763 - 2405815
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2405763 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 2405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 16056790 - 16056720
Alignment:
Q  53 attcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  16056790 attcgaaagacctagtctcatctctctccataacttttccaaaca-atctttattttctgttatttaatttt 16056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 45941670 - 45941788
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattttt-accacttctatag-tatttagtacattt 262  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |  ||||| |||  | ||||||||| ||    
T  45941670 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacatttttagtacactt 45941769  T
Q  263 gctaaaatatctatcagta 281  Q
    |||||||||| ||| ||||    
T  45941770 gctaaaatatttattagta 45941788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 16060959 - 16060886
Alignment:
Q  50 atgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||||||||||  |||||||   ||||||||||| ||||||||||||||||||||| ||||    
T  16060959 atgattcgaaagacctagtctcatctctctccattacttttccaaaca-atctttattttctgttatttaatttt 16060886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 21111028 - 21110976
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  21111028 tttatacatcctaaatatttactttattgctaaattgagagtaacacagtcct 21110976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 41058172 - 41058120
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  41058172 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcct 41058120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 42022882 - 42022934
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  42022882 tttatacatcctaaatatttactttattgttaaattgagattaacacagtcct 42022934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 49853008 - 49852956
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  49853008 tttatacatcctaaatatttactttattgctaaattgagattaacacaatcct 49852956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 3796707 - 3796602
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| |  |||||||| ||| ||||||||||||||||   ||||||| |||||||||| ||||| ||||||||| ||||| ||||    
T  3796707 tttacacatcctaaatattaaacttattgctgaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggtacacttgc 3796608  T
Q  265 taaaat 270  Q
     |||||    
T  3796607 caaaat 3796602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 16062205 - 16062132
Alignment:
Q  50 atgattcgaaagacctagtctcatctc--tccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||||||||||||  ||||||  |||| |||||| ||||||||||||| ||||||| ||||    
T  16062205 atgattcgaaagacctagtctcatctctttccataactttttcaaaca-atctttattttctattatttaatttt 16062132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 34065151 - 34065082
Alignment:
Q  52 gattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgt-tatttact 119  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| ||| ||||||||    
T  34065151 gattcgaaagacctagtctcatctctctccatatcttttccaaaca-atctttattttttgtctatttact 34065082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 37183866 - 37183631
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-ca-tatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  ||||||||||| || | | |||||||||  |||| |||||||||||||||||  |||| ||||||||        
T  37183866 ggggaacatcgatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatc-ttattttctgttatttaaattta-tgcaatca---- 37183773  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatt 232  Q
    || | ||| ||| | |||| |  |||||||  |||| ||||| || ||||| || ||||||||||| |||||||||||||||||   ||| ||  |||||    
T  37183772 aaactactgcctcg-ggcact--aaaagaa-atttacacatcctagatattaacattattgctaaattgagattaacacagtcctcgtggaaataatatt 37183677  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||||||| | ||||| |||| |||||||||||||    
T  37183676 tttactacttcgatagtatatggtacacttgccaaaatatctatca 37183631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 6070956 - 6070856
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatct--ctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||| ||||  ||||||||  |||| | | |||||||||  |||| ||||||||||||||||| ||||  |||||||||| |    
T  6070956 ggggaacatcgatgattcgaaaaacctgatctcatctcgctccttgtcttttccaaaactatc-ttattttctgttatttaatttttatgcaatcaaatc 6070858  T
Q  137 aa 138  Q
    ||    
T  6070857 aa 6070856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 31204959 - 31205038
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttattta 117  Q
    |||||||||||||||||||||||||||  |||||  ||||||| | | |||||||||  |||| |||||||||||||||||    
T  31204959 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttattta 31205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 672987 - 672936
Alignment:
Q  127 caatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||||||||||| ||||||| |||  ||||||||| ||||||||||    
T  672987 caatcaaaccaatcaactgcctagtgacaaaacaaaagaacctttatacatc 672936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 905614 - 905552
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| |||||||||||| | ||||||| ||| |||||| ||||||||||||||    
T  905614 ttacttttat-gcaaacaaaccaatcaaatgcctagtgtcaaatcaaaataacttttatacatc 905552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 16055558 - 16055485
Alignment:
Q  50 atgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||| ||||||||||||||||  ||||||||  ||||||||||| || ||||||| |||||||||| ||||    
T  16055558 atgattcggaagacctagtctcatctctctccataacttttccaaaca-atatttatttactgttatttaatttt 16055485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 29643224 - 29643185
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  29643224 ggggaacatcgatgattcgaaagacctaaactcatctctc 29643185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 7635782 - 7635849
Alignment:
Q  53 attcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||| |||||||  ||| ||||| ||||  | |||||||||||| |||||||||||    
T  7635782 attcgaaagacctagtctaatctctctctatcttttctaaac--aactttattttctgatatttactttt 7635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 20398974 - 20399060
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttat 124  Q
    ||||||||| ||||| |||||||||||  ||||||||||| | |||  |||||||   |||||||||||| ||||||||| ||||||    
T  20398974 ggggaacatagatgactcgaaagacctgatctcatctctctcttattctttccaactctatctttattttatgttatttaattttat 20399060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 45941537 - 45941607
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  45941537 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 45941607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 30545984 - 30546013
Alignment:
Q  316 actcaagaagttggtgcttctcagaactga 345  Q
    ||||||||||||||||||||||||||||||    
T  30545984 actcaagaagttggtgcttctcagaactga 30546013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 3796829 - 3796746
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||| ||||||||||||||||||  |||||||||| | |||  |||||||   |||| ||||||| ||||||||||||||    
T  3796829 ggggaacatagatgattcgaaagacctaaactcatctctctcttattctttccaactctatc-ttattttatgttatttactttt 3796746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 21018470 - 21018402
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  21018470 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 21018402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 41058303 - 41058235
Alignment:
Q  41 ggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||| |||||||||||||||||| |||| ||||||   |||||||| || || |||| ||||||||    
T  41058303 ggaacatagatgattcgaaagacctaatctcttctctcttcatattttctaaccaaatctatattttct 41058235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 280
Target Start/End: Original strand, 42063045 - 42063289
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatca 141  Q
    ||||| |||||||| |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  42063045 aacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgttatttacttttattgcaatcaaacaaatca 42063144  T
Q  142 actacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgct-aaatgagattaacacagtcc---tgggaacgatatttttac 237  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||   ||||||||||||||||||    
T  42063145 actgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctgaattgagattaacatagtcctcgtgggaacgatatttttac 42063244  T
Q  238 cacttctatagta--tttagtacatttgctaaaatatctatcagt 280  Q
     ||||| ||||||  ||||||||| ||||||||| ||||||||||    
T  42063245 tacttcgatagtatttttagtacacttgctaaaaaatctatcagt 42063289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 22936940 - 22936707
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatat--tttccaaacatatctttatttt-ctgtt-atttacttttattgcaatcaaa 134  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||  |||||||||||| ||||| ||||| |||||| |||||||||    
T  22936940 ggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttatttttctgtttatttaattttat-gcaatcaaa 22936842  T
Q  135 ccaatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgata 230  Q
     |||  | ||||  |         ||||| ||  |||| ||||| |||||||||||||||||||||||| |||||||||||||||||   ||||||||||    
T  22936841 tcaa--atctacaaa---------caaaataa--tttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgata 22936755  T
Q  231 tttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  22936754 tttttactacttcgatagtatttagtacacttgctaaaatatctatca 22936707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 43491999 - 43492114
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| |||||   ||||||||||||||||| ||||| ||||||||||||||||||||    
T  43491999 tttatacatcctaaatatttactttattgctaaattgagattaacacggtccttgtgggaacgatatttttactacttcgatagtatttagtacatttgc 43492098  T
Q  265 taaaatatctatcagt 280  Q
    |||||  |||||||||    
T  43492099 taaaaattctatcagt 43492114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 41876634 - 41876521
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  41876634 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 41876535  T
Q  265 taaaatatctatca 278  Q
    ||||| ||||||||    
T  41876534 taaaaaatctatca 41876521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 31863958 - 31864072
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  31863958 tttatacatcctaaatatttactttattgctaaattgagattaactcagtcctcgtgggaacgatatttttactacttcaatagtatttagtacacttgc 31864057  T
Q  265 t-aaaatatctatca 278  Q
    | |||||||||||||    
T  31864058 taaaaatatctatca 31864072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 41306401 - 41306290
Alignment:
Q  174 acatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| |||||||||||| || |||||||||    
T  41306401 acatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtgcacttgctaaaa 41306302  T
Q  270 tatctatcagta 281  Q
     |||||||||||    
T  41306301 aatctatcagta 41306290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 21332683 - 21332503
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatat-tttccaaacatatctttattttctgttatttacttttattgcaatcaaa-c 135  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||   ||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  21332683 ggggaacatagatgattcgaaagacctgatctcatctctctcttattcctttccaaaactatctttattttctgttatttacttttattgcaatcaaatc 21332584  T
Q  136 caatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
     |||||||| ||| | ||||  |||||| |  |||||| |||  ||||||||||||||||||||||| ||| ||||||||||||||    
T  21332583 aaatcaactgcctcg-ggca--tcaaaata--ttttattcattctaaatatttactttattgctaaattgaaattaacacagtcct 21332503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 21335701 - 21335522
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatat-tttccaaacatatctttattttctgttatttacttttattgcaatcaaa-c 135  Q
    ||||||||| ||||||||||||||| | |||||||||||| | |||   ||||||||  |||||||||||| |||||||||||||||||||||||||| |    
T  21335701 ggggaacatagatgattcgaaagacttggtctcatctctcgcttattcctttccaaaactatctttattttatgttatttacttttattgcaatcaaatc 21335602  T
Q  136 caatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
     |||||||| ||| | ||||    |||| |  ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||    
T  21335601 aaatcaactgcctcg-ggca---taaaata--ttttatacattctaaatatttactttattgctaaattgaaattaacacagtcct 21335522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 40916037 - 40915931
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  40916037 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctaaagggaatgatatttttactacttcgatagtatttagtacacttgc 40915938  T
Q  265 taaaata 271  Q
    |||||||    
T  40915937 taaaata 40915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 26292982 - 26293048
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  26292982 ttacttttat-gcaatcaaaccaatcaactgcctagtggcaaatcaaaagaacttttatacatcttaa 26293048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 14375798 - 14375723
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccat--atattttccaaacatatctttattttctgtt 112  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||    
T  14375798 ggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtt 14375723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 26752581 - 26752477
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| |||||||| ||||| || |||||||||||| |||||||||||||| ||   ||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  26752581 tttacacatcttagatattaacgttattgctaaattgagattaacacagtactcgtggggacgatatttttactacttcgatagtatttagtacacttgc 26752482  T
Q  265 taaaa 269  Q
    |||||    
T  26752481 taaaa 26752477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 34832016 - 34832131
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgata-tttttaccacttctata-gtatttagtacattt 262  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   ||||||||||| ||||||  ||||| ||| || ||||||||| ||    
T  34832016 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacgtttttagtacactt 34832115  T
Q  263 gctaaaatatctatca 278  Q
    |||||| |||||||||    
T  34832116 gctaaagtatctatca 34832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 37215288 - 37215396
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaatgagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgct 265  Q
    |||| ||||| ||||||||||| |||||    | ||||||||||||||||||   ||||||||||||||||| ||||| | ||||||||||||| |||||    
T  37215288 tttacacatcctaaatatttacgttatt----attgagattaacacagtcctcgtgggaacgatatttttactacttcgacagtatttagtacacttgct 37215383  T
Q  266 aaaatatctatca 278  Q
    |||| ||||||||    
T  37215384 aaaaaatctatca 37215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 4099520 - 4099426
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| ||||||||||||||||||||||||||| ||   |||||||| || |  ||||||||||| ||||||||| ||||| ||||||||||    
T  4099520 ggggaacatagatgattcgaaagacctagtctcatctttcttcatattttctaaccgaatctttattttatgttatttaatttta-tgcaatcaaa 4099426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 14016141 - 14015906
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| |||||||||||||||  ||||| ||||||||| |    
T  14016141 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttatttaaatttat-gcaatcaaaac 14016044  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
     |    || ||| | |||| |  ||||||| ||| | ||||| || ||||| || |||||||||||| |||||||||||||||||   || |||||||||    
T  14016043 ta----ctgcctcg-ggcact--aaaagaaattt-acacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggaaacgatatt 14015952  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| |||| |||| ||||| |||| |||| ||||||||    
T  14015951 tttactacttcgataggatttggtacacttgccaaaaaatctatca 14015906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 30066563 - 30066615
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  30066563 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 30066615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 31575550 - 31575609
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgtt 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||    
T  31575550 gattcgaaagacctagtctcatctctccatatcttttccaaaca-aactttattttttgtt 31575609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 22131349 - 22131485
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||||||||||||||||||||||||  |||||||||||   ||||||||  ||   ||||||||||||||||  ||||||||| ||||| ||||| ||    
T  22131349 ggggaacatcgatgattcgaaagacctgatctcatctctctccatattttcttaatcaatctttattttctgtt-gttactttta-tgcaa-caaacaaa 22131445  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
     ||||| |||||||| ||  | ||| ||||||||||||||    
T  22131446 ccaactgcctagtggaaaaactaaataacttttatacatc 22131485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 7625222 - 7625318
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||||||||||| |||||||||  |||||  ||||||| | | |||||||||  |||| ||||||||||||||||||||||  ||||||||||    
T  7625222 ggggaacatcgatgatttgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttatttactttttatgcaatcaaa 7625318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 17664670 - 17664809
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||| |||| ||||||||  |||||||||||  | |||| |  ||||  ||||||||||| |||  ||||||||||| |||| |||| |||    
T  17664670 ggggaacatagataattcaaaagacctgatctcatctctcttt-tattcttgaaaccaatctttattttatgtc-tttacttttat-gcaaacaaatcaa 17664766  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatctta 181  Q
    |||||| |||||||||||  ||||| |||||||||||||||||    
T  17664767 tcaactgcctagtggcaaaacaaaataacttttatacatctta 17664809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 26907331 - 26907285
Alignment:
Q  132 aaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  26907331 aaaccaatcaactgcctagtggcaaatcaaaagaacttttatacatc 26907285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 7271270 - 7271322
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  7271270 tttatacatcctaaatatttattttattgctaaattgagattaacacagtcct 7271322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 11959108 - 11959061
Alignment:
Q  131 caaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  11959108 caaaccaatcaactgcctagtggcaaatcaaaagaacctttatacatc 11959061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 23044334 - 23044392
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttata 174  Q
    |||||||||| |||| |||||||||||||| ||||||||||| |||||| ||||||||||    
T  23044334 ttacttttat-gcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttata 23044392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 31863834 - 31863873
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  31863834 ggggaacatagatgattcgaaagacctagtctcatctctc 31863873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 12088158 - 12088215
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| ||||||||  ||||| ||||||| |||||||||||||||||||||||    
T  12088158 tgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaa 12088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 34132905 - 34132848
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| ||||||||  ||||| ||||||| |||||||||||||||||||||||    
T  34132905 tgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaa 34132848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 34143136 - 34143079
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| ||||||||  ||||| ||||||| |||||||||||||||||||||||    
T  34143136 tgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaa 34143079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 4099406 - 4099354
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  4099406 tttatatatcctaaatatttactttattgctaaattgatattaacacagtcct 4099354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 28787200 - 28787148
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||| |||||    
T  28787200 tttatacatcctaaatatttactttattgctaaattgagactaacacggtcct 28787148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 32838121 - 32838235
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatag-tatttagtacatttg 263  Q
    |||| ||||| |||||||| || |||||| ||||| |||||||||||||||||   || |||||||||||||  ||||| |||  | ||||||||| |||    
T  32838121 tttacacatcctaaatattaaccttattgataaattgagattaacacagtcctcgtggaaacgatatttttattacttcgatacatttttagtacacttg 32838220  T
Q  264 ctaaaatatctatca 278  Q
    ||||||||| |||||    
T  32838221 ctaaaatatttatca 32838235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 33552373 - 33552425
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  33552373 tttatacatcctaaatatttactctattgttaaattgagattaacacagtcct 33552425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 26895532 - 26895470
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| ||||||||||||||||| | |||| ||||||  ||||| ||||||||||||||    
T  26895532 ttacttttat-gcaatcaaaccaatcaattgcctaatggcaaaacaaaataacttttatacatc 26895470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 21915256 - 21915324
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||| ||||||||  ||| |||||||| || ||| ||||||||| ||||||||||||    
T  21915256 gattcgaaagacctagtcacatctctctctatcttttccaatca-atc-ttattttctattatttactttt 21915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 33320854 - 33320820
Alignment:
Q  100 tttattttctgttatttacttttattgcaatcaaa 134  Q
    |||||||||||||||||||||||||||||| ||||    
T  33320854 tttattttctgttatttacttttattgcaaccaaa 33320820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 39192582 - 39192632
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtc 218  Q
    |||||||||| |||||||||| |||||||||||| ||||||||| ||||||    
T  39192582 tttatacatcctaaatatttaatttattgctaaattgagattaatacagtc 39192632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 17748640 - 17748693
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||| ||||||||||    
T  17748640 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatc 17748693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 20056034 - 20056074
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaa 156  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  20056034 ttacttttat-gcaatcaaaccaatcaactgcctagtggcaa 20056074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 12088259 - 12088307
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaat 270  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||||    
T  12088259 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 12088307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 23044443 - 23044487
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  23044443 tgggaacgatatttttactacttcgatagtatttggtacacttgc 23044487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 35049806 - 35049762
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  35049806 tgggaacgatatttttactacttcgatagtatttggtacacttgc 35049762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 41876767 - 41876699
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  41876767 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 41876699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 10885061 - 10885244
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| |||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10885061 ggggaacatagatgattcgaaagacctagtctcatctcttatatatattttccaaaactatctttattttctgttatttacttttattgcaatcaaacca 10885160  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10885161 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcct 10885244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 52200117 - 52200295
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa-cca 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |    
T  52200117 ggggaacatcaatgattcgaaagacctagtctcatctctccatatatttttcaaacatatctttattttctgttatttatttttattgcaatcaaatcaa 52200216  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||| ||| | ||||  |||||| |  ||||||||||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  52200217 atcaactgcctcg-ggca--tcaaaata--ttttatacatccttaatatttactttattgctaaattgaaattaacacagtcct 52200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 39 - 269
Target Start/End: Complemental strand, 16184677 - 16184445
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catata-ttttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  ||||||||||| | |||  |||||||||  |||||||||||| | |||||||||||||||||||||||| |    
T  16184677 ggggaacatcgatgattcgaaagacctgatctcatctctctcctattcttttccaaaactatctttatttttttttatttacttttattgcaatcaaatc 16184578  T
Q  137 aa-tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatat 231  Q
    || |||||| |||   ||||  |||||| |  ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||   || ||||||||    
T  16184577 aaatcaactgcctca-ggca--tcaaaata--ttttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggaaacgatat 16184483  T
Q  232 ttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    |||||| ||||| ||||||||||||||| |||||||||    
T  16184482 ttttactacttcgatagtatttagtacacttgctaaaa 16184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 55031986 - 55031904
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttt 121  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  55031986 ggggaacatcgatgattcgaaagacctagtctcatctctccgtatattttccaaacatatctttattttctgatatttacttt 55031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 55034846 - 55034764
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  55034846 ggggaacatcgatgattcgaaagacctagtctcatctctccatgtattttccaaacatatctttattttctgatatttacttt 55034764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 278
Target Start/End: Original strand, 35412716 - 35412946
Alignment:
Q  41 ggaacatcgatgattcgaaagacctagtctcatctctccatatat--tttccaaacatatctttattttctgtt-atttacttttattgcaatcaaacca 137  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||  |||| ||||||||| || ||||| |||||| ||||||||| ||    
T  35412716 ggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatccttattttctatttatttaattttat-gcaatcaaatca 35412814  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattt 233  Q
    |  | ||||  |         ||||| ||  |||| ||||| |||||||||||||||||||||||| |||||||||||||||||   |||||||||||||    
T  35412815 a--atctacaaa---------caaaataa--tttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatattt 35412901  T
Q  234 ttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||    
T  35412902 ttactacttcgatagtatttagtacacttgctaaaatatctatca 35412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 269
Target Start/End: Original strand, 24125707 - 24125931
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatca 141  Q
    ||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||| |||||||||||| |||||| |||| | ||   | |     
T  24125707 aacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgttatttaattttat-gcaaaccaa---aact 24125802  T
Q  142 actacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttac 237  Q
    ||| ||||| ||||| | ||||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||    
T  24125803 actgcctag-ggcaact-aaaagaaattt-atacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttac 24125899  T
Q  238 cacttctatagtatttagtacatttgctaaaa 269  Q
     ||||| ||||||||||||||| |||||||||    
T  24125900 tacttcgatagtatttagtacacttgctaaaa 24125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 269
Target Start/End: Original strand, 24128984 - 24129208
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatca 141  Q
    ||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||| |||||||||||| |||||| |||| | ||   | |     
T  24128984 aacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgttatttaattttat-gcaaaccaa---aact 24129079  T
Q  142 actacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttac 237  Q
    ||| ||||| ||||| | ||||||| ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||    
T  24129080 actgcctag-ggcaact-aaaagaaattt-atacatcctaaatatttactttattgctaaattgagattaacacagtcctcgagggaacgatatttttac 24129176  T
Q  238 cacttctatagtatttagtacatttgctaaaa 269  Q
     ||||| ||||||||||||||| |||||||||    
T  24129177 tacttcgatagtatttagtacacttgctaaaa 24129208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 43809784 - 43809963
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catata-ttttccaaacatatctttattttctgttatttacttttattgcaatcaaa-c 135  Q
    |||||||||||||||||||||||||||  ||||||||||| | |||  |||||||||  |||||||||||| |||||||||||||||||||||||||| |    
T  43809784 ggggaacatcgatgattcgaaagacctgatctcatctctctcctattcttttccaaaactatctttattttatgttatttacttttattgcaatcaaatc 43809883  T
Q  136 caatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc 219  Q
     |||| ||| ||| | ||||  |||||| |  ||||||||||| ||||||||||||||||||||||| | | |||||||||||||    
T  43809884 aaatctactgcctcg-ggca--tcaaaata--ttttatacatcctaaatatttactttattgctaaattaaaattaacacagtcc 43809963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 7486775 - 7487013
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||| |||||||||||| |||||| |||| | ||       
T  7486775 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgttatttaattttat-gcaacccaa--- 7486870  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattt 233  Q
    | | ||| ||||| ||||||| ||||||| ||| | ||||| |||||||| || |||||||||||| |||||||||||||||||   |||||||||||||    
T  7486871 aactactgcctag-ggcaatt-aaaagaaattt-acacatcctaaatattaaccttattgctaaattgagattaacacagtccttgtgggaacgatattt 7486967  T
Q  234 ttaccacttctatagtatttagtacatttgct-aaaatatctatca 278  Q
    |||  ||||| ||||||||||||||| ||||| |||||||||||||    
T  7486968 ttattacttcgatagtatttagtacacttgctaaaaatatctatca 7487013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 2873892 - 2874006
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaatga-gattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| | |||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  2873892 tttacacatcctaaatattaacattattgctaaattaagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 2873991  T
Q  265 taaaatatctatcag 279  Q
    |||||||||||||||    
T  2873992 taaaatatctatcag 2874006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 539154 - 539267
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||| | ||||    
T  539154 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtatacttgc 539253  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  539254 taaaatatctatca 539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 12541166 - 12541053
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  12541166 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcatgggaacgatatttttactacttcaatagtatttagtacacttgc 12541067  T
Q  265 taaaatatctatca 278  Q
    || |||||||||||    
T  12541066 tacaatatctatca 12541053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 43927177 - 43927281
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||| ||||  ||||||||||||||| ||||    
T  43927177 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactactttgatagtatttagtacacttgc 43927276  T
Q  265 taaaa 269  Q
    |||||    
T  43927277 taaaa 43927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 2775822 - 2775935
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  2775822 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagtacacttgc 2775921  T
Q  265 taaaatatctatca 278  Q
      ||| ||||||||    
T  2775922 acaaaaatctatca 2775935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 2779064 - 2779177
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  2779064 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagtacacttgc 2779163  T
Q  265 taaaatatctatca 278  Q
      ||| ||||||||    
T  2779164 acaaaaatctatca 2779177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 268
Target Start/End: Complemental strand, 8461473 - 8461257
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaaccaatca 141  Q
    ||||| |||||||||||||||||| |||||||||||  ||| |||||||||  ||||||||||||||||| ||||| |||||| ||||||||| |||  |    
T  8461473 aacatagatgattcgaaagacctaatctcatctctctttatcttttccaaaactatctttattttctgtttatttaattttat-gcaatcaaatcaa--a 8461377  T
Q  142 actacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttac 237  Q
     ||||  |         ||||| ||  |||||| ||| ||||||||||||||||| |||||| |||||||||||| ||||   | |||||||||||||||    
T  8461376 tctacaaa---------caaaataa--tttataaatcctaaatatttactttatttctaaattgagattaacacattcctcatgtgaacgatatttttac 8461288  T
Q  238 cacttctatagtatttagtacatttgctaaa 268  Q
     ||||| ||||||||||||||| ||||||||    
T  8461287 tacttcgatagtatttagtacacttgctaaa 8461257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 54724069 - 54724184
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| ||||||||||||||| || |||||||| |||||   ||||||||||||||||| ||||| ||| ||||||||||| ||||    
T  54724069 tttacacatcctaaatattaactttattgctaaattgaaattaacacggtcctcgtgggaacgatatttttactacttcgataatatttagtacacttgc 54724168  T
Q  265 taaaatatctatcagt 280  Q
    |||||||||| |||||    
T  54724169 taaaatatctctcagt 54724184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 23298480 - 23298366
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatag-tatttagtacatttg 263  Q
    |||| ||||| ||||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| |||  | ||||||||| |||    
T  23298480 tttacacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatacatttttagtacacttg 23298381  T
Q  264 ctaaaatatctatca 278  Q
    |||||||||||||||    
T  23298380 ctaaaatatctatca 23298366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 30691063 - 30691177
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| |||||||||||| || ||||    
T  30691063 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtgcacttgc 30691162  T
Q  265 taaaa-tatctatca 278  Q
    ||||| |||||||||    
T  30691163 taaaattatctatca 30691177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 19301482 - 19301412
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttta 123  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||    
T  19301482 gattcgaaagacctagtctcatctctc-atatatttttcaaacaaatctttattttctgttatttaatttta 19301412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 54461219 - 54461316
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatat--tttccaaacatatctttattttctg-ttatttacttttattgcaatcaaa 134  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||| ||||||| ||||| ||||||||||    
T  54461219 ggggaacattgatgactcgaaagacctagtctcatctctccatatatagtttccaaaactatctttattttctgtttatttaatttta-tgcaatcaaa 54461316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 6922848 - 6922952
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| ||||||||||||||| ||||||||||||||| |   ||||||||||||||||| ||||| ||||||||||||| | ||||    
T  6922848 tttacacatcctaaatattaactttattgctaaattgagattaacacagtcttcgtgggaacgatatttttactacttcgatagtatttagtatacttgc 6922947  T
Q  265 taaaa 269  Q
    |||||    
T  6922948 taaaa 6922952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 269
Target Start/End: Complemental strand, 10106586 - 10106362
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaaccaatc 140  Q
    ||||| |||||||| |||||||||||||||||||||  ||||||||||||||  ||||||||||||||| ||||||| ||||| |||||||||| |||      
T  10106586 aacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtttatttaatttta-tgcaatcaaatcaa-- 10106490  T
Q  141 aactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-------tgagattaacacagtcc---tgggaacgata 230  Q
    | |||  ||     ||  ||||| ||  |||||||||| ||||||||||||  |||||||||       |||||||||||||||||   |||||||||||    
T  10106489 atcta--ta-----aa--caaaataa--tttatacatcctaaatatttactaaattgctaaattgagattgagattaacacagtcctcgtgggaacgata 10106401  T
Q  231 tttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    ||||||| ||||| ||||||||||||||| |||||||||    
T  10106400 tttttactacttcgatagtatttagtacacttgctaaaa 10106362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 18641762 - 18641674
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccat--atattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||||||||| ||||||| ||||||    
T  18641762 ggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttat 18641674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 18644758 - 18644670
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccat--atattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||||||||| ||||||| ||||||    
T  18644758 ggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttat 18644670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 278
Target Start/End: Complemental strand, 50461402 - 50461303
Alignment:
Q  183 atatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| |||| |||||||||||||    
T  50461402 atattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaatatctatca 50461303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 37408885 - 37409021
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  |||   ||||||||||||||| ||| |||||||| |||| ||||||||    
T  37408885 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattcttaaaatcaatctttattttctgtcatt-acttttat-gcaaacaaaccaa 37408981  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||   ||||||||| |||||||||||||||||||||    
T  37408982 tcaactgtttagtggcaaatcaaaagaacttttatacatc 37409021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 54720179 - 54720312
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatcaa 142  Q
    ||||| ||||||||||||||||||  |||||||||| || |  ||  |||||  ||||||| ||||||| ||| |||||||| | || ||||||||||||    
T  54720179 aacatagatgattcgaaagacctaaactcatctctctatcttattctcaaaccaatctttaatttctgtcatt-acttttat-gtaaacaaaccaatcaa 54720276  T
Q  143 ctacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||  |||||||||| |||||||||||||||||||||    
T  54720277 ctgtctagtggcaaatcaaaagaacttttatacatc 54720312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 19304666 - 19304595
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||| ||||||    
T  19304666 gatttgaaagacctagtctcatctctc-atatattttccaaacaaatatttattttctattatttaattttat 19304595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 11190854 - 11190967
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| ||| |||| || ||||| |||||| |||||||| ||||| ||   ||||||||||||||||| ||||| ||||||||||||||| || |    
T  11190854 tttacacatcctaagtattaaccttattactaaattgagattaatacagttctcgtgggaacgatatttttactacttcgatagtatttagtacacttac 11190953  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  11190954 taaaatatctatca 11190967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 17040011 - 17039875
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctccatatatt-ttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||||||||||||||||||||  |||||| ||||  | |||| ||  ||||  ||||||||||||||| ||| |||||||| |||| ||||| ||    
T  17040011 gggaacatcgatgattcgaaagacctgatctcatttctctct-tattctttaaaaccaatctttattttctgtcatt-acttttat-gcaaccaaacaaa 17039915  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| |||||| ||| ||||||||||    
T  17039914 tcaactgcctagtggcaaatcaaaataacctttatacatc 17039875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 22416824 - 22416686
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| |||| |||    
T  22416824 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattcttaaaaccaatctttattttctgttattgc---ttat-gcaaacaaaacaa 22416730  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||  ||||| ||||||| |||||||||||||||||||||||    
T  22416729 tcaaccgcctagcggcaatttaaaagaacttttatacatcttaa 22416686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 25486395 - 25486474
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  25486395 atctttattttctgtcgtt-acttttat-gcaatcaaaccaatcaactacctagtggcaaaacaaaataacctttatacatc 25486474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 28008061 - 28007884
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| |||||||||||||||||| ||||||||||| | |||  |||  || || ||||||||||||||| ||| |||||||| ||||||||| ||    
T  28008061 ggggaacatagatgattcgaaagacctaatctcatctctctcttattctttagaacca-atctttattttctgtcatt-acttttat-gcaatcaaatca 28007965  T
Q  138 a-tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    | || ||| ||||  |||||  ||||| ||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  28007964 aatctactgcctaa-ggcaaa-caaaataa--tttatacatcctaaatatttactttattgctaaattgagattaacatagtcct 28007884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 31549453 - 31549571
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaa-tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttat 195  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| || ||| ||||| |  ||  ||||| ||  |||||||||| ||||||||||||||||    
T  31549453 atctttattttatgttatttacttttat-gcaatcaaatcaaatctactgcctagggtaaa--caaaataa--tttatacatcctaaatatttactttat 31549547  T
Q  196 tgctaaa-tgagattaacacagtc 218  Q
    ||||||| ||||||||||||||||    
T  31549548 tgctaaattgagattaacacagtc 31549571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 28266246 - 28266332
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtat 251  Q
    |||| ||||| ||||||||||  |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| |||||||    
T  28266246 tttacacatcctaaatatttagcttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtat 28266332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 18644628 - 18644523
Alignment:
Q  174 acatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgct-aaa 268  Q
    |||||||| ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||||    |||||||| || ||||| |||    
T  18644628 acatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttct----tatttagtgcacttgctaaaa 18644533  T
Q  269 atatctatca 278  Q
    ||||||||||    
T  18644532 atatctatca 18644523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 34983707 - 34983646
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacat 177  Q
    |||||||||| |||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  34983707 ttacttttat-gcaaacaaaccaatcaactgcctagtggtaaatcaaaagaacttttatacat 34983646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 53816157 - 53816261
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||| ||||| |||||||||| |||||| |   ||||||||||||||| ||| | ||||||||||||||| ||||    
T  53816157 tttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatttttactactacgatagtatttagtacacttgc 53816256  T
Q  265 taaaa 269  Q
    |||||    
T  53816257 taaaa 53816261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 6434643 - 6434526
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttacca---cttctatagtatttagtacatt 261  Q
    |||| ||||| |||||||| || |||||| ||||| |||||||||||||||||   ||||||||||||||||  |   |||| |||||||||||| || |    
T  6434643 tttacacatcataaatattaaccttattgttaaattgagattaacacagtcctcgtgggaacgatatttttattattacttcgatagtatttagtgcact 6434544  T
Q  262 tgctaaaatatctatcag 279  Q
    |||||||| |||||||||    
T  6434543 tgctaaaaaatctatcag 6434526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 12561134 - 12561077
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||||||||||||||||||    
T  12561134 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacttttatacatcttaa 12561077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 17528751 - 17528617
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||| |||||| |||||||||||  | |||| |  ||||  ||||||||||||||| |||     |||| |||| ||||||||    
T  17528751 ggggaacatagatgattcgaacgacctaatctcatctctctct-tattcttaaaaccaatctttattttctgtcattgc---ttat-gcaaacaaaccaa 17528657  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| | |||||||| ||||||||||    
T  17528656 tcaactgcctagtggcaaattaaaagaacctttatacatc 17528617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 45896718 - 45896826
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgata----tttttaccacttctatagtatttagtacat 260  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   |||| ||||||    ||||||  ||||| ||||||||||||| |     
T  45896718 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtggggacgatatttttttttattacttcgatagtatttagtatac 45896817  T
Q  261 ttgctaaaa 269  Q
    |||||||||    
T  45896818 ttgctaaaa 45896826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 49742776 - 49742661
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcctgg---gaacgata-tttttaccacttctata-gtatttagtacattt 262  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |   |||||||| ||||||  ||||| ||| || ||||||||| ||    
T  49742776 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtaagaacgatattttttattacttcgatacgtttttagtacactt 49742677  T
Q  263 gctaaaatatctatca 278  Q
    |||||||  |||||||    
T  49742676 gctaaaaattctatca 49742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 52990904 - 52991042
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  ||||||||||| |||||||     |||| ||||  |||||||    
T  52990904 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattcttaaaaccaatctttattttttgttattgc---ttat-gcaaataaaccaa 52990998  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||||||||| |||||| ||| ||||||||||||||    
T  52990999 tcaactgcctagtggcaaatcaaaataacctttatacatcttaa 52991042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10902277 - 10902329
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  10902277 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcct 10902329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 20728502 - 20728450
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  20728502 tttatacatcctaaatattcactttattgctaaattgagattaacacagtcct 20728450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 17141612 - 17141748
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||| |||| |||||||||  ||||||||||  | |||| |  ||||  ||||||||||||||| ||| |||||| | |||| ||||||||    
T  17141612 ggggaacatagataattcaaaagacctaagctcatctctctct-tattcttaaaaccaatctttattttctgtcatt-acttttgt-gcaaacaaaccaa 17141708  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||   || |||||| |||||||||||||||||||||    
T  17141709 tcaactgtttaatggcaaatcaaaagaacttttatacatc 17141748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 18641632 - 18641559
Alignment:
Q  174 acatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttc 243  Q
    |||||||| ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| |||||    
T  18641632 acatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttc 18641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 35751645 - 35751780
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||||||||||||||||||||||||  |||||||||||   ||||||||  ||   ||| ||| ||||||||  ||| ||||| ||||| ||||| ||    
T  35751645 ggggaacatcgatgattcgaaagacctgatctcatctctctccatattttcttaatcaatc-ttaatttctgtt-gttattttta-tgcaa-caaacaaa 35751740  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
     ||||| ||||||||||| |||||| ||||||||||||||    
T  35751741 ccaactgcctagtggcaaatcaaaataacttttatacatc 35751780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 10902144 - 10902213
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttc 108  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || ||||||||||||    
T  10902144 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctttattttc 10902213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 47051700 - 47051784
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-cata-tattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||| |||||||||||||||||  ||||||||||| |||  | |||||||||  |||||| ||||||||||||||||||||    
T  47051700 ggggaacatagatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatctt-attttctgttatttactttt 47051784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 50461538 - 50461459
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttattta 117  Q
    |||||||||||||||||||||||||||  |||||||  ||||| | | |||||||||  |||| |||||||||||||||||    
T  50461538 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttattta 50461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 539042 - 539118
Alignment:
Q  50 atgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||||||||||| ||||||||||| | |||| ||||||||  ||||||||| ||||| ||||||| ||||||    
T  539042 atgattcgaaagacctaatctcatctctctcttatactttccaaaactatctttatattctgtttatttaattttat 539118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10881817 - 10881869
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  10881817 tttatatatcctaaatatttactttattgctaaattgatattaacacagtcct 10881869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 16244210 - 16244262
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  16244210 tttatacatcctaaatatttactttattactaaattgagattaacacggtcct 16244262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 25585014 - 25585084
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaa-atgagattaacacagtcc---tgggaacgatattttt 235  Q
    |||||||||| ||||||||||||||||| ||||  | |||||||||||||||   ||||||||||||||||    
T  25585014 tttatacatcctaaatatttactttatttctaagttaagattaacacagtccttgtgggaacgatattttt 25585084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 6434768 - 6434729
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  6434768 ggggaacatagatgattcgaaagacctaatctcatctctc 6434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 11190731 - 11190818
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  ||||||||  ||||||||| ||||| ||||||| ||||||    
T  11190731 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttat 11190818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 25442668 - 25442610
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcagta 281  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||| |||||||||||    
T  25442668 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatcagta 25442610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 52309605 - 52309511
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| | |||||||||||||||  |||||||||||   |||||||| || |  ||||||||||| |||||||||  |||| ||||||||||    
T  52309605 ggggaacatagttgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttattttatgttatttaaattta-tgcaatcaaa 52309511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 53816032 - 53816119
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||||||||| ||||||| ||||||    
T  53816032 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttat 53816119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 16244077 - 16244147
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  16244077 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 16244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 20728637 - 20728567
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  20728637 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaatcaaatctatattttct 20728567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 28327694 - 28327778
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagt 249  Q
    |||| ||||| |||||||| |  |||||||||||| || ||||||||||||||   ||||||||||||||||| ||||| |||||    
T  28327694 tttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacgatatttttactacttcgatagt 28327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 28331019 - 28331103
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagt 249  Q
    |||| ||||| |||||||| |  |||||||||||| || ||||||||||||||   ||||||||||||||||| ||||| |||||    
T  28331019 tttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacgatatttttactacttcgatagt 28331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 29343864 - 29343794
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  29343864 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 29343794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 45896585 - 45896655
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  45896585 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 45896655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 48063848 - 48063791
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  48063848 tgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatca 48063791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 52309489 - 52309455
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat 203  Q
    |||||||||| ||||||||||||||||||||||||    
T  52309489 tttatacatcctaaatatttactttattgctaaat 52309455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 17531565 - 17531512
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||||||||  | |||||||| ||||||||||    
T  17531565 tgcaaacaaaccaatcaactgcctagtggcatattaaaagaacctttatacatc 17531512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 22783819 - 22783892
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttatt 125  Q
    ||||||||||||||  |||||||||||   |||||||| || |  ||||||||||| ||||||||| |||||||    
T  22783819 gattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaattttatt 22783892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 22788183 - 22788256
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttatt 125  Q
    ||||||||||||||  |||||||||||   |||||||| || |  ||||||||||| ||||||||| |||||||    
T  22788183 gattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaattttatt 22788256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 22993686 - 22993602
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    ||||||| | || |||||||||||||||||||||||||||  ||| ||||| ||||| |  || ||||||| ||||||||| ||||    
T  22993686 ggggaacttagaggattcgaaagacctagtctcatctctctctatcttttctaaaca-actttaattttctattatttactattat 22993602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 25442769 - 25442716
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||| ||||||||||    
T  25442769 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatc 25442716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 28266338 - 28266371
Alignment:
Q  245 atagtatttagtacatttgctaaaatatctatca 278  Q
    ||||||||||||||| ||||||||||||||||||    
T  28266338 atagtatttagtacacttgctaaaatatctatca 28266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 32367039 - 32366982
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| ||||||||| ||||| ||||| | |||||||||||||||| ||||||    
T  32367039 tgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacttcttaa 32366982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 2775686 - 2775754
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  2775686 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 2775754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 2778929 - 2778997
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  2778929 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 2778997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 15195153 - 15195109
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  15195153 tgggaacgatatttttactacttcgatagtatttggtacacttgc 15195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 22993489 - 22993449
Alignment:
Q  239 acttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    ||||| ||||| ||||||||| |||||||||||||||||||    
T  22993489 acttcgatagtttttagtacacttgctaaaatatctatcag 22993449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 25584881 - 25584949
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  25584881 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 25584949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 27092101 - 27092137
Alignment:
Q  42 gaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    ||||||||||||||||||||||||  |||||||||||    
T  27092101 gaacatcgatgattcgaaagacctgatctcatctctc 27092137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 31857913 - 31857949
Alignment:
Q  180 taaatatttactttattgctaaa-tgagattaacaca 215  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31857913 taaatatttactttattgctaaattgagattaacaca 31857949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 32366938 - 32366890
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaat 270  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||||    
T  32366938 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 32366890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 34983598 - 34983554
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  34983598 tgggaacgatatttttactacttcgatagtatttggtacacttgc 34983554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 41977338 - 41977390
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| |||||||||| |||||||||||| | ||||||||||||||||    
T  41977338 tttatatatcctaaatatttattttattgctaaattaagattaacacagtcct 41977390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 46885299 - 46885343
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  46885299 tgggaacgatatttttactacttcgatagtatttggtacacttgc 46885343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 18911617 - 18911861
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  18911617 ggggaacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgttatttacctttattgtaatcaaacca 18911716  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatattt 233  Q
    ||||||| |||||||||||||||||||||  ||||| |||| |||||||||  |||||||||||| |||||||||||||||||   ||| ||||||||||    
T  18911717 atcaactgcctagtggcaattcaaaagaaaatttattcatcctaaatattttttttattgctaaattgagattaacacagtcctcgtggaaacgatattt 18911816  T
Q  234 ttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||    
T  18911817 ttactacttcgatagtatttagtacacttgctaaaatatctatca 18911861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 43 - 220
Target Start/End: Complemental strand, 37103215 - 37103036
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatca 141  Q
    ||||| ||||||||||||||| |||||||||||||   ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  37103215 aacatagatgattcgaaagacttagtctcatctcttatatatattttccaaaactatctttattttctattatttacttttattgcaatcaaaccaatca 37103116  T
Q  142 actacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37103115 actgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcct 37103036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 279
Target Start/End: Original strand, 12238384 - 12238615
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||  |||||||||||| ||||||||| |||||| ||||||||| ||    
T  12238384 ggggaacattgatgactcgaaagacctagtctcatctctcatatatattttccaaaactatctttattttatgttatttaattttat-gcaatcaaatca 12238482  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattt 233  Q
    |  | |||  ||     ||  ||||| ||  |||||||||| |||||||||||||||||||||||| |||||||| |||||| |   |||||||||||||    
T  12238483 a--atcta--ta-----aa--caaaataa--tttatacatcctaaatatttactttattgctaaattgagattaatacagtcatcgtgggaacgatattt 12238569  T
Q  234 ttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    |||| ||||| || |||||||||||| |||||||||||||||||||    
T  12238570 ttactacttcgatggtatttagtacacttgctaaaatatctatcag 12238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 15432197 - 15432436
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaa-cc 136  Q
    ||||||||||||||| ||||||||||||||||||||||||    ||||||||||||| |||||||||||||| ||||||| ||||| |||||||||| |     
T  15432197 ggggaacatcgatgactcgaaagacctagtctcatctctcttattattttccaaacaaatctttattttctgtttatttaatttta-tgcaatcaaatca 15432295  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatt 232  Q
    || | ||| |||   ||||  | |||| ||  |||| ||||| |||||||| || ||||||||||| |||||||||||||||||   |||||||||||||    
T  15432296 aaactactgcct-caggca--ttaaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 15432390  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||| ||||| ||||| ||||||||| ||||||||    
T  15432391 tttacaacttcgataatattttgtacacttgctaaaaaatctatca 15432436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 278
Target Start/End: Complemental strand, 34319919 - 34319684
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| ||||||||||||||||||||  |||||||||| |     
T  34319919 gggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttatttactttttatgcaatcaaaact 34319821  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattt 233  Q
    |    ||  || | |||| |  ||||||| ||| | ||||| |||||||| || |||||||||||| |||||||||||||||||   |||||||||||||    
T  34319820 a----ctgtctcg-ggcact--aaaagaaattt-acacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 34319729  T
Q  234 ttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||    
T  34319728 ttactacttcgatagtatttagtacacttgctaaaatatctatca 34319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 40902953 - 40902840
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  40902953 tttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 40902854  T
Q  265 taaaatatctatca 278  Q
    |||||||| |||||    
T  40902853 taaaatatttatca 40902840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 5681547 - 5681720
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaat-caaaccaa 138  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||| ||||||||| ||||| |||||| ||| | ||    
T  5681547 gggaacatcgatgattcgaaagacctagtctcatctctccttatcttttccaaaactatctttattttatgttatttaatttta-tgcaatccaatcaaa 5681645  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaatgagattaacacagtcct 220  Q
    || ||| || || |||||  ||||| ||  |||||||||| ||||||||||||||||||||   ||||||||| ||||||||    
T  5681646 tctactgcccag-ggcaa-acaaaataa--tttatacatcctaaatatttactttattgct---tgagattaatacagtcct 5681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 5673137 - 5673251
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||| ||||||||||| ||||    
T  5673137 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgataatatttagtacacttgc 5673236  T
Q  265 taaaatatctatcag 279  Q
    |||||||||||||||    
T  5673237 taaaatatctatcag 5673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 279
Target Start/End: Complemental strand, 52530938 - 52530699
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaacc 136  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||| ||||||| ||||| |||||| ||||||||| |    
T  52530938 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttat-gcaatcaaaac 52530840  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
     |    || ||||| |||||   ||||||| ||| | |||||||| ||||| || |||||||||||| |||||||||||||||||   ||||||||||||    
T  52530839 ta----ctgcctag-ggcaaactaaaagaaattt-acacatcttagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 52530746  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    ||||| ||||| ||||||||| ||||  |||||||||||||||||||    
T  52530745 tttactacttcgatagtatttggtacgcttgctaaaatatctatcag 52530699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 44808955 - 44808731
Alignment:
Q  42 gaacatcgatgattcgaaagacctagtctcatct--ctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaat 139  Q
    ||||||||||||||||||||| ||  ||||||||  |||| | | |||||||||  |||||| ||||||||||||||||||||  |||||||||| | |     
T  44808955 gaacatcgatgattcgaaagatctgatctcatctttctccttgtcttttccaaaactatctt-attttctgttatttactttttatgcaatcaaaacta- 44808858  T
Q  140 caactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattttt 235  Q
       || ||| | |||| |  ||||||| ||| | ||||| |||||||| || |||||||||||| |||||||||||||||||   |||||||||||||||    
T  44808857 ---ctgcctcg-ggcact--aaaagaaattt-acacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattttt 44808765  T
Q  236 accacttctatagtatttagtacatttgctaaaa 269  Q
    || ||||| ||||||||||||||| |||||||||    
T  44808764 actacttcgatagtatttagtacacttgctaaaa 44808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 27014504 - 27014617
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   || |||||||||||||| ||||| || ||||||||| || ||||    
T  27014504 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatatttttactacttcgatggtatttagtgcacttgc 27014603  T
Q  265 taaaatatctatca 278  Q
    ||||| ||||||||    
T  27014604 taaaaaatctatca 27014617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 27676925 - 27676812
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagt---cctgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||||||||   | | |||||||||||||||| ||||| ||| ||||||||||| ||||    
T  27676925 tttatacatcctaaatatttactttatttctaaattgagattaacacagttttcgtaggaacgatatttttactacttcgataatatttagtacacttgc 27676826  T
Q  265 taaaatatctatca 278  Q
    || |||||||||||    
T  27676825 tagaatatctatca 27676812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 34017663 - 34017550
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||| ||   ||||||||||||||||| ||||| |||||||||| |||| ||||    
T  34017663 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtgctcgcgggaacgatatttttactacttcgatagtatttaatacacttgc 34017564  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  34017563 taaaatatctatca 34017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 48637741 - 48637853
Alignment:
Q  160 aaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttag 255  Q
    ||||||| |||| |||||| ||||||||||| |||||||||||| | |||||||||||||||   ||||||||||||||||| ||||| |||||||||||    
T  48637741 aaaagaaatttt-tacatcctaaatatttaccttattgctaaattgggattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttag 48637839  T
Q  256 tacatttgctaaaa 269  Q
    |||| |||||||||    
T  48637840 tacacttgctaaaa 48637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 25962180 - 25962310
Alignment:
Q  42 gaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatca 141  Q
    |||||||||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||    ||||||| |||| ||||||||||     
T  25962180 gaacatcgatgattcgaaagacctaaactcatctctctct-tattcttaaaaccaatctttattttctgtta----cttttat-gcaaacaaaccaatct 25962273  T
Q  142 actacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||| ||||||||||| |||||||||||||||||||||    
T  25962274 actgcctagtggcaaatcaaaagaacttttatacatc 25962310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 38283359 - 38283247
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   ||||||| |||||||||| ||||| ||||||||| ||||| ||||    
T  38283359 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggtacacttgc 38283260  T
Q  265 taaaatatctatca 278  Q
     |||| ||||||||    
T  38283259 caaaa-atctatca 38283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 5706511 - 5706599
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc--atatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||| ||||||| ||||||    
T  5706511 ggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttat 5706599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 29325065 - 29325178
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  29325065 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 29325164  T
Q  265 taaaatatctatca 278  Q
     ||||||| |||||    
T  29325165 caaaatatttatca 29325178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 35510110 - 35510285
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||| || ||||||||||||||||||  ||||||||||  |  || ||  || || ||||||||||||||| ||| |||||||| |||| ||||||||    
T  35510110 ggggaatatagatgattcgaaagacctaaactcatctctctcttaatcttaaaacca-atctttattttctgtcatt-acttttat-gcaaacaaaccaa 35510206  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||||| |||||  ||||| ||  |||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  35510207 tcaactgcctag-ggcaaa-caaaataa--tttatacatcctaaatattcactttattgctaaattgagattaacacagtcct 35510285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 40616686 - 40616573
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||  || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  40616686 tttacacatcctaaatatcaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 40616587  T
Q  265 taaaatatctatca 278  Q
     ||||||| |||||    
T  40616586 caaaatatttatca 40616573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 5670819 - 5670928
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||| |||||||||||    |    
T  5670819 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgataatatttagtaca----c 5670914  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  5670915 taaaatatctatca 5670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 21419907 - 21420040
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||||||||||||||||||||||  ||||||||||  | |||| |  |||   ||||||| |||||||||    ||||||| |||| ||||||||    
T  21419907 ggggaacatcgatgattcgaaagacctaaactcatctctctct-tattcttaaaatcaatctttaatttctgtta----cttttat-gcaaacaaaccaa 21420000  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    | |||| |||||||| || |||||||||||||||||||||    
T  21420001 taaactgcctagtggaaaatcaaaagaacttttatacatc 21420040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 40493370 - 40493237
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||||||||||||||||||||||  ||||| ||||  | |||| |  ||||  ||||||| ||| |||||    ||||||| | || ||||||||    
T  40493370 ggggaacatcgatgattcgaaagacctaaactcatatctctct-tattcttaaaaccgatctttaatttatgtta----cttttat-gtaaacaaaccaa 40493277  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  40493276 tcaactgcctagtggcaaatcaaaagaacttttatacatc 40493237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 46955481 - 46955347
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||||||||||||||| ||||||||| |||||||||| | | |||| |  ||||  ||||||||||||||||| ||||||    ||||| ||| ||||    
T  46955481 ggggaacatcgatgattcaaaagacctaatctcatctct-cttttattcttaaaaccaatctttattttctgtta-ttactt---atgcaaacaacccaa 46955387  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| |||||||||||   |||||||| ||||||||||    
T  46955386 tcaactgcctagtggcaaactaaaagaacatttatacatc 46955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 3720602 - 3720654
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  3720602 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 3720654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 3797695 - 3797643
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  3797695 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 3797643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 15445224 - 15445120
Alignment:
Q  180 taaatatttactttattgctaaat-gagattaacacagtcct---gggaacga---tatttttaccacttctatagtatttagtacatttgctaaaatat 272  Q
    |||||||||||||||||||||||| ||||||||  |||||||   ||  ||||   ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  15445224 taaatatttactttattgctaaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttagtacacttgctaaaatat 15445125  T
Q  273 ctatc 277  Q
    |||||    
T  15445124 ctatc 15445120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 24044009 - 24043957
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  24044009 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 24043957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 3797811 - 3797718
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| |||||||||||||||||  |||||||||||  ||| |||||||||  |||  ||||||||||||||||| ||||| ||||||||||    
T  3797811 ggggaacatagatgattcgaaagacctgatctcatctctctctatcttttccaaaactat-gttattttctgttatttaatttta-tgcaatcaaa 3797718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 24150916 - 24151028
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| ||||||||||||||||   ||||||| |||||||||| ||||| ||||||||| ||||| ||||    
T  24150916 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggtacacttgc 24151015  T
Q  265 taaaatatctatca 278  Q
     |||| ||||||||    
T  24151016 caaaa-atctatca 24151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 53009561 - 53009426
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| || ||||| |||||||||  ||||||||||  | |||| |  ||||  ||||||| ||||||| ||| |||||||| |||| ||||||||    
T  53009561 ggggaacatagacgattcaaaagacctaaactcatctctctct-tattcttaaaaccaatctttaatttctgtcatt-acttttat-gcaaacaaaccaa 53009465  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| ||||||||| |||||||||||    
T  53009464 tcaactgcctagtggcaa-tcaaaagaaattttatacatc 53009426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 34017784 - 34017699
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  ||||||||| ||||||||| |||||||||||| ||||||    
T  34017784 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaac-tatctttatattctgttatttaattttat 34017699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 40795254 - 40795304
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtc 218  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  40795254 tttatacatcctaaatatttactttattgctaaattgagattaacacagtc 40795304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 18673085 - 18672947
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  ||||||||||| |||||||     |||| |||| |||| |||    
T  18673085 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaaccaatctttattttatgttattgc---ttat-gcaaacaaatcaa 18672991  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  18672990 tcaactgcctagcggcaaattaaaagaacttttatacatcttaa 18672947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 11195876 - 11195932
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatctta 181  Q
    ||||| |||||||||||| ||||||||||||| |||||| |||||||||||| ||||    
T  11195876 tgcaaacaaaccaatcaattacctagtggcaaatcaaaataacttttatacaactta 11195932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 12786364 - 12786416
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  12786364 tttatacatcctaaatattcactttattgctaaattgagattaacacagtcct 12786416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 19820956 - 19821008
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  19820956 tttatacatcctaaatatttactttattgctaaattgagattaacacaatcct 19821008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 19827663 - 19827715
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  19827663 tttatacatcctaaatatttactttattgctaaattgagattaacacaatcct 19827715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 30392760 - 30392823
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattc-aaaagaacttttatacatc 178  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  30392760 ttacttttat-gcaatcaaaccaatcaactgcctagtggcaaatcaaaaataacttttatacatc 30392823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 5706641 - 5706714
Alignment:
Q  174 acatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttc 243  Q
    |||||||| ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| |||||    
T  5706641 acatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttc 5706714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 29544803 - 29544741
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||| | ||||| ||||||    
T  29544803 ttacttttat-gcaatcaaaccaatcaactgcctagtggcaaatcaaaatagcttttgtacatc 29544741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 33408201 - 33408154
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacaca 215  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  33408201 tttatacatcctaaatatttactttattgctaaattgagattaacaca 33408154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 33408320 - 33408223
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaa 134  Q
    ||||||| | || |||||||||||||||  ||||||  |||||||||||||||||||  |||||||||||| || ||||||| ||||| ||||||||||    
T  33408320 ggggaacttagaggattcgaaagacctaaactcatcactctccatatattttccaaaactatctttattttatgtttatttaatttta-tgcaatcaaa 33408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 33927091 - 33927175
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||||||||||||  |||||  ||||||| | | |||||||||  |||| ||||||| ||||||||||||||    
T  33927091 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttatgttatttactttt 33927175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 52005634 - 52005600
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat 203  Q
    |||||||||||||||||||||||||||||||||||    
T  52005634 tttatacatcttaaatatttactttattgctaaat 52005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 52006534 - 52006464
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| ||||||||||||||||| ||||||||||||   |||||||| || || |||| ||||||||    
T  52006534 ggggaacatagatgattcgaaagacctggtctcatctctcttcatattttctaaccaaatctatattttct 52006464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 56195646 - 56195741
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    |||||||||||||||||||||||||||  |||||  ||||||| | | |||||||||  |||| |||||||||||||||||  |||| ||||||||||    
T  56195646 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttatttaaattta-tgcaatcaaa 56195741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 22172362 - 22172290
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgt-tatttacttttat 124  Q
    ||||| ||||||||||||||||||||| |||| ||||||||| | |||||||||||| || ||||||| |||||    
T  22172362 gattcaaaagacctagtctcatctctctatatcttttccaaa-aaatctttattttccgtctatttacatttat 22172290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 15429726 - 15429610
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacga---tatttttaccacttctatagtatttagtacatt 261  Q
    |||||||||| |||||||||||||||||| |||| |||||||||  ||||||   |||  ||||   ||||||||| ||||| |||||||||| |||  |    
T  15429726 tttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttaatacgct 15429627  T
Q  262 tgctaaaatatctatca 278  Q
    ||||||||| |||||||    
T  15429626 tgctaaaatgtctatca 15429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 15436340 - 15436224
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacga---tatttttaccacttctatagtatttagtacatt 261  Q
    |||||||||| |||||||||||||||||| |||| |||||||||  ||||||   |||  ||||   ||||||||| ||||| |||||||||| |||  |    
T  15436340 tttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttaatacgct 15436241  T
Q  262 tgctaaaatatctatca 278  Q
    ||||||||| |||||||    
T  15436240 tgctaaaatgtctatca 15436224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 52006401 - 52006349
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| |||||||||||||||| |||||| ||||||||||||||||||    
T  52006401 tttatatatcctaaatatttactttatcgctaaattgagattaacacagtcct 52006349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 15164388 - 15164450
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| ||||| |||||| ||||||||||||| |||||| ||| ||||||||||    
T  15164388 ttacttttat-gcaaacaaacaaatcaattacctagtggcaaatcaaaataacctttatacatc 15164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 5677402 - 5677356
Alignment:
Q  49 gatgattcgaaagacctagtctcatctctccatatattttccaaaca 95  Q
    ||||||||||| |||||  |||||||||||||||||||||| |||||    
T  5677402 gatgattcgaatgacctgatctcatctctccatatattttctaaaca 5677356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 18672903 - 18672846
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcagt 280  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| ||||| |||||||||    
T  18672903 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat-tctatcagt 18672846  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 19827534 - 19827604
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  19827534 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 19827604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 25962357 - 25962407
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaat 270  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||| |||||    
T  25962357 tgggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 25962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 38283492 - 38283422
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  38283492 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 38283422  T

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Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 56198972 - 56199056
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||||||||||||  | |||  ||||||| | | |||||||||  |||| ||||||||| ||||||||||||    
T  56198972 ggggaacatcgatgattcgaaagacctgatttcatctctctccttgtcttttccaaaactatc-ttattttctattatttactttt 56199056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 15445368 - 15445299
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttc 108  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| |||||||    
T  15445368 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 15445299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 19820846 - 19820923
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttattt 116  Q
    ||||||||  |||||||||||||||||  |||||||||||   |||||||| || |  ||||||||||| ||||||||    
T  19820846 ggggaacaaagatgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttattttatgttattt 19820923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 49270932 - 49270977
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaaca 213  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||    
T  49270932 tttatacatcataaatattcactttattgctaaattgagattaaca 49270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10386180 - 10386232
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaa-atgagattaacacagtcct 220  Q
    |||| ||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  10386180 tttacacatcctaaatattaactttattgctaagttgagattaacacagtcct 10386232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 21420091 - 21420150
Alignment:
Q  224 aacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcagtaatc 284  Q
    |||||||||||||| ||||| |||||||||  |||| |||| ||||| |||||||||||||    
T  21420091 aacgatatttttactacttcgatagtatttgatacacttgccaaaat-tctatcagtaatc 21420150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 29324944 - 29325022
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttattta 117  Q
    ||||||||||||||||||||||||||  ||| |  ||||||| | | |||||||||  |||| |||||||||||||||||    
T  29324944 gggaacatcgatgattcgaaagacctgatctgatctctctccttgtcttttccaaaactatc-ttattttctgttattta 29325022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 30392870 - 30392914
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  30392870 tgggaacgatatttttactacttcgatagtatttggtacaattgc 30392914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 44165034 - 44165086
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||  |||||||    
T  44165034 tttatacatcataaatatttactttattactaaattgagattaaatcagtcct 44165086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 48415395 - 48415344
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||    
T  48415395 tttatacatcctaaatatttac-ttatttctaaattgagattaacacagtcct 48415344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 39 - 282
Target Start/End: Original strand, 26 - 275
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| |||||||||||||||||  |||| ||||||  | | ||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  26 ggggaacatagatgattcgaaagacctgatctc-tctctctttttctttccaaaac-tatctttattttctgttatttacttttattgcaatcaaaccaa 123  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaa----cgata 230  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||     ||||    
T  124 tcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaatgatagata 223  T
Q  231 tttttaccacttctatagtatttagtacatttgctaaaatatctatcagtaa 282  Q
    ||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  224 tttttactacttcgatagtatttagtacacttgctaaaaaatctatcagtaa 275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 39 - 282
Target Start/End: Original strand, 62636 - 62885
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| |||||||||||||||||  |||| ||||||  | | ||| | |||| |||||||||||||||||||||||||||||||||||||||||||    
T  62636 ggggaacatagatgattcgaaagacctgatctc-tctctctttttctttccaaaac-tatctttattttctgttatttacttttattgcaatcaaaccaa 62733  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaa----cgata 230  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||     ||||    
T  62734 tcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaatgatagata 62833  T
Q  231 tttttaccacttctatagtatttagtacatttgctaaaatatctatcagtaa 282  Q
    ||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  62834 tttttactacttcgatagtatttagtacacttgctaaaaaatctatcagtaa 62885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 64052 - 64114
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| || ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  64052 ttacttttat-gcaaacataccaatcaactgcctagtggcaaatcaaaataacttttatacatc 64114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 42 - 286
Target Start/End: Complemental strand, 2441283 - 2441041
Alignment:
Q  42 gaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaat 139  Q
    ||||||||||||||||||||||||  |||||||||||  | ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2441283 gaacatcgatgattcgaaagacctgatctcatctctctccttat-ttttccaaaactatctttattttctgttatttacttttattgcaatcaaaccaat 2441185  T
Q  140 caactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatattttt 235  Q
    ||||| ||||||||||||| |||||||  |||||||||| |||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||    
T  2441184 caactgcctagtggcaatttaaaagaaaatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtgggaacgatattttt 2441085  T
Q  236 accacttctatagtatttagtacatttgct-aaaatatctatcagtaatcag 286  Q
    ||        || ||||||||||| ||||| ||||||||||||| |||||||    
T  2441084 ac--------taatatttagtacacttgctaaaaatatctatcattaatcag 2441041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 48645580 - 48645758
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa-cca 137  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  48645580 ggggaacatcgatgattcgaaagatctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaatcaa 48645679  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||| |||   ||||  |||||| |  ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  48645680 atcaactgcct-caggca--tcaaaata--ttttatacatcctaaatatttactttattgctaaattgaaattaacacagtcct 48645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 4543036 - 4543140
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  4543036 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 4543135  T
Q  265 taaaa 269  Q
    |||||    
T  4543136 taaaa 4543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 13449664 - 13449551
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||| ||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  13449664 tttatacatcctaaatatttactttactgctaaattgagattaacatagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 13449565  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  13449564 taaaatatctatca 13449551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 4547108 - 4547212
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||||| ||||| ||||||||||||||| ||||    
T  4547108 tttatacatcctaaatatttactttattgctaaactgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttagtacacttgc 4547207  T
Q  265 taaaa 269  Q
    |||||    
T  4547208 taaaa 4547212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 23224788 - 23224675
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||| ||||||| |||||||||||| || ||||||||||||||   |||| |||||||||||| ||||| ||||||||||||||| ||||    
T  23224788 tttatacatcctaattatttaccttattgctaaattgaaattaacacagtcctcgtgggagcgatatttttactacttcgatagtatttagtacacttgc 23224689  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  23224688 taaaatatctatca 23224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 37415306 - 37415206
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  37415306 tttatacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 37415207  T
Q  265 t 265  Q
    |    
T  37415206 t 37415206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 8277226 - 8277339
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   ||| |||||||||||||| ||||| ||||||||| ||||| ||||    
T  8277226 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatatttttactacttcgatagtatttggtacacttgc 8277325  T
Q  265 taaaatatctatcag 279  Q
     ||||| ||||||||    
T  8277326 caaaat-tctatcag 8277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 6603687 - 6603800
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  6603687 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 6603786  T
Q  265 taaaatatctatca 278  Q
     |||||||||||||    
T  6603787 caaaatatctatca 6603800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 20080726 - 20080590
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||| ||  ||||||||||  | |||| |  ||||   |||||||||||||| ||| |||||||| |||| ||||||||    
T  20080726 ggggaacatagatgattcgaaagacttaaactcatctctctct-tattcttaaaaccattctttattttctgtcatt-acttttat-gcaaacaaaccaa 20080630  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  20080629 tcaactgcctagtggcaaatcaaaagaacttttatacatc 20080590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 11919739 - 11919623
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattttt---accacttctatagtatttagtacatt 261  Q
    |||||||||| ||||||||||||||||| |||||| |||||||| ||||||||   |||||| ||||||||   || ||||| ||||||||||||| | |    
T  11919739 tttatacatcctaaatatttactttatttctaaattgagattaatacagtcctcgtgggaactatattttttttactacttcgatagtatttagtagact 11919640  T
Q  262 tgctaaaatatctatca 278  Q
    |||||||||||||||||    
T  11919639 tgctaaaatatctatca 11919623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 16165855 - 16166090
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| ||||||||||||||||||||  ||||     |||    
T  16165855 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttatttactttttatgcac----acc 16165949  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
    |||| ||| ||| | |||| |  ||||||| ||| | ||||| || ||||| || |||||| ||||| |||||||||||||||||   ||||||||||||    
T  16165950 aatctactgcctcg-ggcact--aaaagaaattt-acacatcctagatattaacgttattgataaattgagattaacacagtccttgtgggaacgatatt 16166045  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  16166046 tttactacttcgatagtatttggtacacttgccaaaa-atctatca 16166090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 5796676 - 5796742
Alignment:
Q  55 tcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  5796676 tcgaaagacttagtctcatctctccatatcttttctaaaca-aactttattttctgttatttactttt 5796742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 45286952 - 45286848
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||| ||||| |||||||||| |||||| |   ||||||||||||||| ||||| ||||||||||||||| ||||    
T  45286952 tttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatttttactacttcgatagtatttagtacacttgc 45286853  T
Q  265 taaaa 269  Q
    |||||    
T  45286852 taaaa 45286848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 14683452 - 14683318
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| |||||||||||||||||  |||||||||||  | |||| |  ||||  ||||||||||| |||  ||||||||||| |||| |||| |||    
T  14683452 ggggaacatagatgattcgaaagacctgatctcatctctcttt-tattcttaaaaccaatctttattttttgtc-tttacttttat-gcaaacaaatcaa 14683356  T
Q  139 tcaactacctagtggcaattcaaaagaacttttataca 176  Q
    |||||| |||||||||||  ||||| ||||||||||||    
T  14683355 tcaactgcctagtggcaaaacaaaataacttttataca 14683318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 26144516 - 26144378
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| |||| |||    
T  26144516 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaaccaatctttattttctgttattgc---ttat-gcaaacaaatcaa 26144422  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  26144421 tcaacttcctagcggcaaattaaaagaacttttatacatcttaa 26144378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 4595884 - 4595832
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  4595884 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 4595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 26557738 - 26557790
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  26557738 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 26557790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 35961339 - 35961391
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  35961339 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 35961391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 269
Target Start/End: Complemental strand, 45290488 - 45290259
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaacc 136  Q
    ||||||||| |||||||||||||||||| ||||||||||| | |||  |||||||   ||||||||||||||||| ||||| |||||| |||| | ||      
T  45290488 ggggaacatagatgattcgaaagacctaatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttat-gcaaaccaa-- 45290392  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatt 232  Q
     | | ||| ||| | ||||| | ||||||| ||| | ||||| |||||||| || |||||| ||||| |||||||||| |||||| |   ||||||||||    
T  45290391 -aactactgcctcg-ggcaact-aaaagaaattt-acacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatt 45290296  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaa 269  Q
    ||||| ||| | ||||||||||||||| |||||||||    
T  45290295 tttactactacgatagtatttagtacacttgctaaaa 45290259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 3067911 - 3067849
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| |||||||||||| | ||||||||||| |||||||||||||||||||||    
T  3067911 ttacttttat-gcaaacaaaccaatcaaatgcctagtggcaaatcaaaagaacttttatacatc 3067849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 13842747 - 13842983
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaat 139  Q
    ||||| ||||||||||||||||||||  |||||||||||  | |||| |  ||||  ||||||||||||||||||||    |||| |||| |||| ||||    
T  13842747 gggaatatcgatgattcgaaagacctgatctcatctctctct-tattcttaaaaccaatctttattttctgttatttc---ttat-gcaaacaaatcaat 13842841  T
Q  140 caactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgc-taaatgagattaacac-agtcct---gggaacgatatttt 234  Q
    ||||| ||||||||||| | |||||||| |||||| ||| ||| |    || | ||||  | | ||||||||| || ||||||   ||||||||||||||    
T  13842842 caactgcctagtggcaaattaaaagaacctttatatatcctaatttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttt 13842941  T
Q  235 taccacttctatagtatttagtacatttgctaaaatatctatc 277  Q
    ||| ||||| ||||| ||| ||||| |||||||||||||||||    
T  13842942 tactacttcgatagt-tttggtacacttgctaaaatatctatc 13842983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 11398057 - 11397973
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-cata-tattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||  | |||||||||  |||||| ||||||||||||||||||||    
T  11398057 ggggaacatcgatgaatcgaaagacctaatctcatctctctcattgtcttttccaaaactatctt-attttctgttatttactttt 11397973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 4695720 - 4695772
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  4695720 tttatacatcctaaatatttactttattgctaaatttagattaacacagtcct 4695772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10345415 - 10345467
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  10345415 tttatacatcctaaatatttactttattgctaaattgagattaacacaatcct 10345467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 9132697 - 9132639
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttata 174  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||| ||||    
T  9132697 ttacttttat-gcaatcaaaccaatcaactgcctagtggcaaatcaaaataacttatata 9132639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 10469324 - 10469386
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| |||||||||||||| |||||||| || |||||| ||||||||||||||    
T  10469324 ttacttttat-gcaaacaaaccaatcaactgcctagtggaaaatcaaaataacttttatacatc 10469386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 13449784 - 13449683
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaac 135  Q
    ||||| |||||||||||||||||||||  |||||||  ||||| | | |||||||||  ||||||||||||||| ||||||| ||||| ||||||||||     
T  13449784 ggggaccatcgatgattcgaaagacctgttctcatctctctccttgtcttttccaaaactatctttattttctgtttatttaatttta-tgcaatcaaat 13449686  T
Q  136 caa 138  Q
    |||    
T  13449685 caa 13449683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 17731060 - 17731111
Alignment:
Q  170 ttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  17731060 ttatacatcctaaatattcactttattgctaaactgagattaacacagtcct 17731111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 279
Target Start/End: Complemental strand, 26136136 - 26135898
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| |||| |||    
T  26136136 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaaccaatctttattttctgttattgc---ttat-gcaaacaaatcaa 26136042  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgc-taaatgagattaacac-agtcctgg--gaacgatatttt 234  Q
    |||||| ||||| ||||| | |||||||| |||||||||||||| |    || | ||||  | | ||||||||| || |||||| |  ||||||||||||    
T  26136041 tcaactgcctagcggcaaattaaaagaacctttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtccttgtggaacgatatttt 26135942  T
Q  235 taccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    ||| ||||| ||||||||| ||||| |||| ||||| ||||||||    
T  26135941 tactacttcgatagtatttggtacacttgccaaaat-tctatcag 26135898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 18562520 - 18562428
Alignment:
Q  58 aaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc-aatcaactacctag 150  Q
    |||||| | ||||||||||||  ||||||||| || || ||||||||||||||| ||| | ||||| |||||||||||| |||| |||||||||    
T  18562520 aaagacatggtctcatctctctctatattttctaatcaaatctttattttctgtcattaattttta-tgcaatcaaaccaaatctactacctag 18562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 37166074 - 37166021
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  37166074 tgcaaacaaaccaatcaactgcctagtggcaaattaaaagaacctttatacatc 37166021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 9864618 - 9864566
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  9864618 tttacacatcctaaatatttactttatttctaaattgagattaacacagtcct 9864566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 22611608 - 22611556
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| ||||||    
T  22611608 tttatacatcctaaatatttactatattgctaaattgagattaacaaagtcct 22611556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 18560018 - 18559979
Alignment:
Q  239 acttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  18560018 acttcgatagtttttagtacatttgctaaaatatctatca 18559979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 45287073 - 45286990
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||| |||||||||||||||||| ||||||||||| | |||  |||||||   ||||||||||||||| ||||||| ||||||    
T  45287073 aacatagatgattcgaaagacctaatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttat 45286990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 4596017 - 4595947
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  4596017 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 4595947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 9864729 - 9864640
Alignment:
Q  44 acatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    |||| ||||||| |||||||||  |||||||||||   |||||||| || |  |||||| |||||||||||||| ||||| ||||||||||    
T  9864729 acatagatgatttgaaagacctgatctcatctctcttcatattttctaaccgaatctttcttttctgttatttaatttta-tgcaatcaaa 9864640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 11919873 - 11919803
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  11919873 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 11919803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 44017660 - 44017576
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagt 249  Q
    |||| ||||| |||||||| |  |||||||||||| || ||||||||||||||   ||||||||||||||||| ||||| |||||    
T  44017660 tttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacgatatttttactacttcgatagt 44017576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 13907617 - 13907569
Alignment:
Q  229 tatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||| |||||||||||| ||||||||| ||||| ||||||||||||    
T  13907617 tatttttatcacttctatagtttttagtacacttgct-aaatatctatca 13907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 20594369 - 20594433
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatcttta 103  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||||||    
T  20594369 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatcttta 20594433  T

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Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 25820850 - 25820672
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa-cca 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  25820850 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaatcaa 25820751  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||| ||| | ||||  | |||| |  ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  25820750 atcaactgcctcg-ggca--taaaaata--ttttatacatcctaaatatttactttattgctaaattgaaattaacacagtcct 25820672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 30274649 - 30274536
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| || |||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  30274649 tttatacatcctatatatttacgttattgctaaattgagattaacacagtcctcatgggaacgatatttttactacttcgatagtatttagtacacttgc 30274550  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  30274549 taaaatatctatca 30274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 8888860 - 8888974
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  8888860 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 8888959  T
Q  265 taaaatatctatcag 279  Q
    |||||||||||||||    
T  8888960 taaaatatctatcag 8888974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 26366035 - 26366131
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| ||| |||| |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  26366035 ggggaacatagataattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgttatttacttttattgcaatcaaa 26366131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 11347775 - 11347662
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||| ||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||  ||||||||||||||| ||||    
T  11347775 tttatacatcctaattatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactactttgatagtatttagtacacttgc 11347676  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  11347675 taaaatatctatca 11347662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 269
Target Start/End: Original strand, 24238469 - 24238700
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacca 137  Q
    ||||||||| ||| |||||||||||||  |||||||| || | |||  |||||||    |||||||||||||||||||||||||||||||||||||||||    
T  24238469 ggggaacatagataattcgaaagacctgatctcatctttctcttattctttccaattcgatctttattttctgttatttacttttattgcaatcaaacca 24238568  T
Q  138 atcaactac---ctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgata 230  Q
    |  ||||||   || | |||| |  |||| ||  |||| ||||| ||| |||| || |||||||||||| |||||||||||||||||   ||||||||||    
T  24238569 a--aactactgtctcg-ggcact--aaaataa--tttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata 24238661  T
Q  231 tttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    ||||||| ||||| ||||||||||||||| |||||||||    
T  24238662 tttttactacttcgatagtatttagtacacttgctaaaa 24238700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 10601076 - 10601190
Alignment:
Q  168 ttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttg 263  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||   || ||||||||||||||| ||||| ||||||||| ||||| |||    
T  10601076 ttttatacatcttaaatatttactttattgctaaattgaaattaacacagtcctcgtgtgaacgatatttttactacttcgatagtatttggtacacttg 10601175  T
Q  264 ctaaaatatctatca 278  Q
    | ||||||| |||||    
T  10601176 ccaaaatatttatca 10601190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 25138928 - 25138761
Alignment:
Q  46 atcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa-ccaatcaac 143  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| | |||| ||    
T  25138928 atcgataattcgaaagacctgatctcatctctctcttatattttccaaacaaatctttattttatgttatttaatttta-tgcaatcaaatcaaatctac 25138830  T
Q  144 tacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacaca 215  Q
    | ||||| |||||  ||||| ||  |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  25138829 tgcctag-ggcaa-acaaaataa--tttatacatcctaagtatttactttattgctaaattgagattaacaca 25138761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 22630943 - 22631079
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctccatatatt-ttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||  |||||||||||||||||  ||||||||||  | |||| ||  ||||| ||||||||||||| | |||||||||||| |||| ||||||||    
T  22630943 gggaacataaatgattcgaaagacctaaactcatctctctct-tattcttaaaaaca-atctttattttctatcatttacttttat-gcaaacaaaccaa 22631039  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  22631040 tcaactgcctagtggcaaatcaaaagaacttttatacatc 22631079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 25871008 - 25871121
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| ||||||||||||||||| |   ||||||||||||||| ||||| ||||||||||||||| ||||    
T  25871008 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtaggaacgatatttttactacttcgatagtatttagtacacttgc 25871107  T
Q  265 taaaatatctatca 278  Q
    |||| |||||||||    
T  25871108 taaattatctatca 25871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 25959570 - 25959457
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| ||||| || || |||||||||||| ||||||||||||||| |   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  25959570 tttacacatcctaaatgttaaccttattgctaaattgagattaacacagtcatcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 25959471  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  25959470 taaaatatctatca 25959457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 37937223 - 37937090
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||||||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||    ||||||| |||| ||||||||    
T  37937223 ggggaacatcgatgattcgaaagacctaaactcatctctctct-tattcttaaaaccaatctttattttctgtta----cttttat-gcaaacaaaccaa 37937130  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    || ||| ||||||||||| |||||||||||||||||||||    
T  37937129 tctactgcctagtggcaaatcaaaagaacttttatacatc 37937090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 45499239 - 45499135
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  45499239 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 45499140  T
Q  265 taaaa 269  Q
    |||||    
T  45499139 taaaa 45499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 24235256 - 24235428
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaat-caactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttat 195  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||| ||| | |||| |  |||| ||  |||| ||||| ||| |||| || ||||    
T  24235256 atctttattttctgttatttacttttattgcaatcaaaccaaaactactgcctcg-ggcact--aaaataa--tttacacatcctaagtattaaccttat 24235350  T
Q  196 tgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    |||||||| |||||||||||||||||   ||||||||||||||||| ||||| |||||||||| || | |||||||||    
T  24235351 tgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttaataaacttgctaaaa 24235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 25874405 - 25874516
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   |||||| |||||||||| ||||| ||||||||||||||| ||||    
T  25874405 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttagtacacttgc 25874504  T
Q  265 taaaatatctat 276  Q
    |||| |||||||    
T  25874505 taaattatctat 25874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 33310768 - 33311003
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    |||||||||||||||||||||||||||  |||||||||||  | | | |||||||||  |||||| |||||||||||||||  ||||| ||||||||| |    
T  33310768 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttatttaaatttat-gcaatcaaaac 33310865  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
     |    || ||| | |||| |  ||||||| ||| | ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||    
T  33310866 ta----ctgcctcg-ggcact--aaaagaaattt-acacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 33310957  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    ||||| ||||| ||||||||| ||||| |||| |||||||||||||    
T  33310958 tttactacttcgatagtatttggtacacttgccaaaatatctatca 33311003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 42368580 - 42368466
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||||||||  |   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  42368580 tttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacgatatttttattacttcgatagtatttagtacacttgc 42368481  T
Q  265 t-aaaatatctatca 278  Q
    | |||||||||||||    
T  42368480 taaaaatatctatca 42368466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 29440719 - 29440821
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   || |||||||||||||| ||||| ||||||||||||||| ||||    
T  29440719 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtggaaacgatatttttactacttcgatagtatttagtacacttgc 29440818  T
Q  265 taa 267  Q
    |||    
T  29440819 taa 29440821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 3875388 - 3875524
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| | ||||||||||||||||  ||||||| ||  | |||| |  ||||  ||||||||||||||| ||| |||||||| |||| ||||||||    
T  3875388 ggggaacataggtgattcgaaagacctaaactcatctttctct-tattcttaaaaccaatctttattttctgtcatt-acttttat-gcaaacaaaccaa 3875484  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||  |||||||||| |||||||||||||||||||||    
T  3875485 tcaactgactagtggcaaatcaaaagaacttttatacatc 3875524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 17877281 - 17877344
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||||||||| ||||||||||||||  ||||||||||  ||||||||||||||||||||    
T  17877281 ttacttttattgcaaacaaaccaatcaactgtctagtggcaaaacaaaagaacttttatacatc 17877344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 9185305 - 9185201
Alignment:
Q  169 tttatacatcttaaatatttactttattgct-aaatgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| ||||||||||| || |||||||||||||||||   ||||||| |||||||||| ||||| ||||||||| ||||| ||||    
T  9185305 tttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggtacacttgc 9185206  T
Q  265 taaaa 269  Q
     ||||    
T  9185205 caaaa 9185201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 31427545 - 31427449
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    |||||||||||||||||||||||||||  |||||||  ||||| | | |||||||||  |||| ||||||||||||||||||||||  ||||||||||    
T  31427545 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttatttactttttatgcaatcaaa 31427449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 40781706 - 40781822
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgata-tttttaccacttctata-gtatttagtacattt 262  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   ||||||||||| ||||||  ||||| ||| || ||||||||| ||    
T  40781706 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacgtttttagtacactt 40781805  T
Q  263 gct-aaaatatctatca 278  Q
    ||| |||||||||||||    
T  40781806 gctaaaaatatctatca 40781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 16790761 - 16790623
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| |||| |||    
T  16790761 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaaccaatctttattttctgttattgc---ttat-gcaaacaaatcaa 16790667  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  16790666 tcaactgcctagcggcaaattaaaagaacttttatacatcttaa 16790623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 43723934 - 43723986
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  43723934 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 43723986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 37279557 - 37279445
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||   ||||||||||||||||| ||||| |||||  || ||||| ||||    
T  37279557 tttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagttattggtacacttgc 37279458  T
Q  265 taaaatatctatca 278  Q
     |||| ||||||||    
T  37279457 caaaa-atctatca 37279445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 38015742 - 38015855
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| ||||||||||||||||   ||||||| |||||||||| ||||| ||||||||| ||||| || |    
T  38015742 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggtacactttc 38015841  T
Q  265 taaaatatctatca 278  Q
     ||||| |||||||    
T  38015842 caaaatttctatca 38015855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 9188533 - 9188429
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||| ||| |||||||||||||| ||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  9188533 tttacacatcctaaatattaaccttattgctgaattgagattaacacagtactcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 9188434  T
Q  265 taaaa 269  Q
     ||||    
T  9188433 caaaa 9188429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 43207759 - 43207648
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcctgggaacgata-tttttaccacttctata-gtatttagtacatttgct 265  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||    |  ||||||||||| ||||||  ||||| ||| || ||||||||| |||||    
T  43207759 tttatacatcctaaatatttactttatttctaaattgagattaac----ttgtgggaacgatattttttattacttcgatacgtttttagtacacttgct 43207664  T
Q  266 aaaatatctatcagta 281  Q
    ||||||||||||||||    
T  43207663 aaaatatctatcagta 43207648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 12219980 - 12220033
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  12219980 tgcaaacaaaccaatcaactgcctagtggcaaatcaaaaaaacttttatacatc 12220033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 23205354 - 23205407
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  23205354 tgcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttatacatc 23205407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 23676958 - 23677011
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  23676958 tgcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttatacatc 23677011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 6827005 - 6827057
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6827005 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcct 6827057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 9966315 - 9966229
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaaata 185  Q
    ||||||||||| ||||| ||||||||| || ||||||||||||||||| |||||  ||||  ||||| |||||||||||||| ||||||    
T  9966315 atctttattttatgttagttactttta-tgtaatcaaaccaatcaactgcctag-agcaaaacaaaataacttttatacatcctaaata 9966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 5105828 - 5105922
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| ||| ||| |||||||||  |||||||||||   |||||||| || || ||||||||||| ||||||||| ||||| ||||||||||    
T  5105828 ggggaacatagataatttgaaagacctgatctcatctctcttcatattttctaaccaaatctttattttatgttatttaatttta-tgcaatcaaa 5105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 5105942 - 5106013
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatattttta 236  Q
    |||||||||| | ||||||||||||||| ||||| |||||||||||||||||   || ||||||||||||||    
T  5105942 tttatacatcctgaatatttactttatttctaaattgagattaacacagtccttgtgagaacgatattttta 5106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 13971782 - 13971730
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||| ||||||    
T  13971782 tttatacatcctaaatattcactttattgctaaattgagattaacaaagtcct 13971730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 16179313 - 16179376
Alignment:
Q  114 tttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||||| |||| || ||||||||||| |||||||||||  ||||| ||||||||||||||    
T  16179313 tttacttttat-gcaaacagaccaatcaacttcctagtggcaaaacaaaataacttttatacatc 16179376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 26366148 - 26366200
Alignment:
Q  169 tttatacatcttaaatatttactttattg-ctaaatgagattaacacagtcct 220  Q
    |||||||||| |||||||||||||||||| | || ||||||||||||||||||    
T  26366148 tttatacatcctaaatatttactttattgccgaattgagattaacacagtcct 26366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 1386341 - 1386290
Alignment:
Q  131 caaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||||||||||| ||||| ||||| | |||||||| ||||||||||||||    
T  1386341 caaaccaatcaactgcctagcggcaaattaaaagaacctttatacatcttaa 1386290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 9185428 - 9185341
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  ||||||||  ||||||||| ||||| ||||||| ||||||    
T  9185428 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttat 9185341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 13971898 - 13971804
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| |||||||||||||||||  | |||||||||   |||||||| || || ||||  ||||| ||||||||| ||||| ||||||||||    
T  13971898 ggggaacatagatgattcgaaagacctgatatcatctctcttcatattttctaaccaaatctacattttatgttatttaatttta-tgcaatcaaa 13971804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 37279680 - 37279593
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  ||||||||  ||||||||| ||||| ||||||| ||||||    
T  37279680 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttat 37279593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 15470559 - 15470629
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  15470559 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 15470629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 25959692 - 25959606
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctg-ttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  |||||||||||    | |||||||||  ||||||||| ||||| ||||||| ||||||    
T  25959692 ggggaacatagatgattcgaaagacctgatctcatctctcttattcttttccaaaactatctttatattctgtttatttaattttat 25959606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 31585944 - 31585874
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  31585944 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 31585874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 40258962 - 40258905
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  40258962 tgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatca 40258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 40677640 - 40677556
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagt 249  Q
    |||| ||||| |||||||| |  |||||||||||| || ||||||||||||||   ||||||||||||||||| ||||| |||||    
T  40677640 tttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacgatatttttactacttcgatagt 40677556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 40781573 - 40781643
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  40781573 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 40781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 43723801 - 43723871
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  43723801 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 43723871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 45457263 - 45457347
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||| | |||||||||||||||||  |||||  ||||||| | | |||||||||  |||| ||||||||||||||||||||||    
T  45457263 ggggaacttagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-ttattttctgttatttactttt 45457347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 13137133 - 13137174
Alignment:
Q  180 taaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  13137133 taaatatttactttattgctaaattgagattaagacagtcct 13137174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 31585811 - 31585762
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagt 217  Q
    |||||||||| || |||||||||||||| ||||| |||||||||||||||    
T  31585811 tttatacatcctagatatttactttatttctaaattgagattaacacagt 31585762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 38015620 - 38015699
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttattta 117  Q
    |||||||||||||||||||||||||||  |||||  ||||||| | | |||||||||  |||| | |||||||||||||||    
T  38015620 ggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatc-tcattttctgttattta 38015699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 40259062 - 40259009
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||| | ||||||||||| | |||||||| ||||||||||    
T  40259062 tgcaaacaaaccaatcaattgcctagtggcaaattaaaagaacctttatacatc 40259009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 16179427 - 16179471
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  16179427 tgggaacgatatttttactacttcgatagtatttggtacacttgc 16179471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 22631126 - 22631170
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  22631126 tgggaacgatatttttactacttcgatagtatttggtacacttgc 22631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 5538776 - 5538598
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa-cca 137  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  5538776 ggggaacatcaatgattcaaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaatcaa 5538677  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||||||    ||||  |||||| |  ||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||    
T  5538676 atcaactacc-ccaggca--tcaaaata--ttttatacatcctaaatatttactttatttctaaattgaaattaacacagtcct 5538598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 23597447 - 23597561
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||| | ||||    
T  23597447 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtatacttgc 23597546  T
Q  265 taaaatatctatcag 279  Q
    |||||||| ||||||    
T  23597547 taaaatatttatcag 23597561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 283
Target Start/End: Complemental strand, 18721284 - 18721047
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaacc 136  Q
    ||||||||| |||||||||||||||||||||||||||||   |||||||||||||   ||||||||||||||||| ||||| |||||| ||||||||| |    
T  18721284 ggggaacatagatgattcgaaagacctagtctcatctcttatatatattttccaacactatctttattttctgtttatttaattttat-gcaatcaaatc 18721186  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatt 232  Q
    ||  | ||||  |         ||||| ||  |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||    
T  18721185 aa--atctacaaa---------caaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 18721099  T
Q  233 tttaccacttctatagtatttagtacatttgct-aaaatatctatcagtaat 283  Q
    ||||| ||||| ||||||||||||| | ||||| |||| |||||||||||||    
T  18721098 tttactacttcaatagtatttagtatacttgctaaaaaaatctatcagtaat 18721047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 10664191 - 10664303
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  10664191 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 10664290  T
Q  265 taaaatatctatca 278  Q
    ||||| ||||||||    
T  10664291 taaaa-atctatca 10664303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 278
Target Start/End: Original strand, 8911837 - 8912003
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattg-ctaaatgagattaaca 213  Q
    |||||||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |    || | ||||  | | ||||||||| |    
T  8911837 ttacttttat-gcaaccaaaccaatcaactgcctagtggcaaatcaaaagaacttttatacatcctaacttacaacgtaattgaattattgagattaaaa 8911935  T
Q  214 -cagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
     ||||||   |||||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  8911936 tcagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa-atctatca 8912003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 16954015 - 16954129
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||| | ||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  16954015 tttacacatcctaaatattaacgttattgttgaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 16954114  T
Q  265 taaaatatctatcag 279  Q
     ||||||||||||||    
T  16954115 caaaatatctatcag 16954129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 25591359 - 25591245
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagt---cctgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||| ||||||| ||||||||||||||   | |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  25591359 tttacacatcctaaatattaaccttatcgctaaattgagattaacacagttttcgtgggaacgatatttttaccacttcgataatatttagtacacttgc 25591260  T
Q  265 t-aaaatatctatca 278  Q
    | |||||||||||||    
T  25591259 taaaaatatctatca 25591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 18825768 - 18825655
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  18825768 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 18825669  T
Q  265 taaaatatctatca 278  Q
     |||| ||||||||    
T  18825668 caaaaaatctatca 18825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 44027096 - 44026960
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||| ||||  | |||| |  ||||  ||||||| ||||||||||| | |||||| |||||||||||||    
T  44027096 ggggaacatagatgattcgaaagacctaaactcatttctctct-tattcttaaaaccaatctttaatttctgttattaa-ttttat-gcaatcaaaccaa 44027000  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||| |  |||||||||| |||||||||||||||||||||    
T  44026999 tcaaatgtctagtggcaaatcaaaagaacttttatacatc 44026960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 17931101 - 17931219
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaatcaa 142  Q
    |||||||||||||||||||||||| |||||||||||  |   | ||  ||||  ||||||||||||||| ||| | |||||| |||||||||||||||||    
T  17931101 aacatcgatgattcgaaagacctaatctcatctctctcttgttctttaaaaccaatctttattttctgtcatt-atttttat-gcaatcaaaccaatcaa 17931198  T
Q  143 ctacctagtggcaattcaaaa 163  Q
    || ||||||||||| ||||||    
T  17931199 ctgcctagtggcaaatcaaaa 17931219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 5584312 - 5584211
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| || |||||||||||||| |   ||||||||||||||| ||||| ||||||||||||||| ||||    
T  5584312 tttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtgagaacgatatttttactacttcgatagtatttagtacacttgc 5584213  T
Q  265 ta 266  Q
    ||    
T  5584212 ta 5584211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 20887784 - 20887889
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattttt-accacttctatagtatttagtacatttg 263  Q
    |||||||||| ||||||||| ||||||| |||||| |||||||||||||||||   ||||||||||||||| |  ||||| ||||||||||||| | |||    
T  20887784 tttatacatcctaaatatttcctttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatagtatttagtatacttg 20887883  T
Q  264 ctaaaa 269  Q
    ||||||    
T  20887884 ctaaaa 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 22173926 - 22173832
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    |||||||||||||||||||||||||||  |||||||||||   |||||||| || |  |||||||||| |||||||||| ||||| ||||||||||    
T  22173926 ggggaacatcgatgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttatttcctgttatttaatttta-tgcaatcaaa 22173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 23643936 - 23644112
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc--catatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaac 135  Q
    ||||||||||||||||||||| |||||  | |||||||||  | ||| |||||||||  ||||||||||||||||| ||||| |||||| |||||||||     
T  23643936 ggggaacatcgatgattcgaacgacctgatatcatctctctccttatcttttccaaaactatctttattttctgtttatttaattttat-gcaatcaaa- 23644033  T
Q  136 caatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
       || ||| ||||| |  ||  ||||| ||  |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  23644034 ---tctactgcctagggaaaa--caaaataa--tttatacatcctaaatatttactttatttctaaattgagattaacacagtcct 23644112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 280
Target Start/End: Original strand, 31284790 - 31285030
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||| ||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| ||||||||    
T  31284790 ggggaacatagatgattcgaatgacctaaactcatctctctct-tattcttaaaaccaatctttattttctgttattgc---ttat-gcaaacaaaccaa 31284884  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattg-ctaaatgagattaaca-cagtcc---tgggaacgatattt 233  Q
    |||||||||||||||||| | |||||||| |||||||||| ||| |    || | ||||  | | ||||||||| | ||||||   ||||||||||||||    
T  31284885 tcaactacctagtggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatattt 31284984  T
Q  234 ttaccacttctatagtatttagtacatttgctaaaatatctatcagt 280  Q
    |||| ||||| ||||||||| ||||| |||| |||| ||||||||||    
T  31284985 ttactacttcgatagtatttggtacacttgccaaaa-atctatcagt 31285030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 5980172 - 5980120
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5980172 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 5980120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 18824275 - 18824181
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtaca 259  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| |||||    
T  18824275 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtaca 18824181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 45155272 - 45155175
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaa 134  Q
    ||||||||| |||||||||||||||||  |||||  ||||||| ||| |||||||||  ||||||||||||||| ||||||| ||||| ||||||||||    
T  45155272 ggggaacatagatgattcgaaagacctgatctcagctctctccttatcttttccaaaactatctttattttctgtttatttaatttta-tgcaatcaaa 45155175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 16953893 - 16953979
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgttatttacttttat 124  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  ||||||||  ||||||||| |||||||||||| ||||||    
T  16953893 ggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgttatttaattttat 16953979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 23619367 - 23619230
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  || || |||||||||||||||||||     |||| |||| |||| |||    
T  23619367 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattcttaaacca-atctttattttctgttattgc---ttat-gcaaacaaatcaa 23619274  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  23619273 tcaactgcctagcggcaaattaaaagaacttttatacatcttaa 23619230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 2560742 - 2560805
Alignment:
Q  114 tttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||| | |||||||| ||||||||||    
T  2560742 tttacttttat-gcaatcaaatcaatctactacctagtggcaaattaaaagaacctttatacatc 2560805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 12516397 - 12516319
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacat 177  Q
    |||||||||||||||  || |||||||| ||||||||||||||||||| ||||||| ||| |||||| ||| |||||||||    
T  12516397 atctttattttctgtcgtt-acttttat-gcaatcaaaccaatcaactgcctagtgacaaatcaaaataacatttatacat 12516319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 14421982 - 14422034
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  14421982 tttatacatcctaaatatttactttattactaaattgagattaacacagtcct 14422034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 22173812 - 22173700
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||| ||||   ||| ||||||| |||||| ||||| ||||| ||| ||||| ||||    
T  22173812 tttatacatcctaaatatttactttatttctaaattgagattaacactgtcctcgtggaaacgataattttactacttcgatagt-tttggtacacttgc 22173714  T
Q  265 taaaatatctatca 278  Q
     ||||  |||||||    
T  22173713 caaaaattctatca 22173700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 33419845 - 33419906
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| ||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||    
T  33419845 ttacttttat-gcaatcaaaacaatcaactgcctagtggca-ttcaaaataacttttatacatc 33419906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 43681857 - 43681776
Alignment:
Q  55 tcgaaagacctagtctcatctctccat--atattttccaaacatatctttattttct-gttatttacttttattgcaatcaaa 134  Q
    |||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||  ||||||| ||||| ||||||||||    
T  43681857 tcgaaagacctagtctcatctctccatatatatttttcaaaactatctttattttctatttatttaatttta-tgcaatcaaa 43681776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 14589624 - 14589540
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    |||||||||||||||||||||| ||||| |||||||  ||||| | | |||||||||  |||| ||||||| ||||||||||||||    
T  14589624 ggggaacatcgatgattcgaaatacctaatctcatctctctccttgtcttttccaaaactatc-ttattttatgttatttactttt 14589540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 33883349 - 33883268
Alignment:
Q  43 aacatcgatgattcgaaagacctagtctca--tctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||| ||||||||||||||| ||  ||||  ||||||  ||| |||||||||  |||||||||||||||||||||||||||    
T  33883349 aacatagatgattcgaaagacttaaactcacctctctctttatcttttccaaaactatctttattttctgttatttactttt 33883268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 4868383 - 4868466
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct-gttatttacttttattgcaatcaaacc 136  Q
    ||||||||||||||||||||||||||  |||| ||||||||| | || |||| |||||  ||||||||||||| ||||||||||||    
T  4868383 gattcgaaagacctagtctcatctctatatatcttttccaaata-atatttaatttctatttatttactttta-tgcaatcaaacc 4868466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 18825890 - 18825811
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttattta 117  Q
    |||||||||||||||||||||||||||  |||||||  ||||| | | |||||||||  |||| |||||||||||||||||    
T  18825890 ggggaacatcgatgattcgaaagacctgatctcatctctctccttttcttttccaaaactatc-ttattttctgttattta 18825811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 12583260 - 12583312
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  12583260 tttatatatcctaaatatttactttattgctaaattgagattaacatagtcct 12583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 36710639 - 36710600
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  36710639 ggggaacatcgatgattcgaaagacctgatctcatctctc 36710600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 43681754 - 43681707
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacaca 215  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  43681754 tttacacatcctaaatatttactttattgctaaattgagattaacaca 43681707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 10498073 - 10498016
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  10498073 tgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatca 10498016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 20887651 - 20887721
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  20887651 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 20887721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 5584399 - 5584330
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttc 108  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| |||||||    
T  5584399 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 5584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 5613708 - 5613635
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttatt 125  Q
    ||||||||||||||  |||||||||||   |||||||| || |  ||||||||||| ||||||||| |||||||    
T  5613708 gattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaattttatt 5613635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 13197031 - 13197106
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttata 174  Q
    |||||||||||| ||| || |||||||| | |||||||| |||||||| ||||||||||| |||||| ||| ||||||    
T  13197031 atctttattttcagttgtt-acttttatgg-aatcaaacaaatcaactgcctagtggcaaatcaaaataacctttata 13197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 18824397 - 18824318
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatc--tctccatatattttccaaacatatctttattttctgttattta 117  Q
    |||||||||||||||||||||| ||||  |||||||  ||||| | | |||||||||  |||| |||||||||||||||||    
T  18824397 ggggaacatcgatgattcgaaatacctgatctcatctctctccttttcttttccaaaactatc-ttattttctgttattta 18824318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 2560852 - 2560896
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  2560852 tgggaacgatatttttactacttcgatagtatttggtacacttgc 2560896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 25231197 - 25231274
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctca----tctctccatatattttccaaacatatctttattttctgtt 112  Q
    ||||||||| |||||||||||||||||  |||||    ||||||  ||| |||||||||  |||||||||||||||||    
T  25231197 ggggaacatagatgattcgaaagacctgatctcaactctctctctttatcttttccaaaattatctttattttctgtt 25231274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 25591482 - 25591398
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctg-ttatttactttt 122  Q
    ||||||||| |||||||||||| ||||  |||||||||||    | |||||||||  ||||||||| ||||| ||||||||||||    
T  25591482 ggggaacatagatgattcgaaacacctgatctcatctctcttattcttttccaaaactatctttatattctgtttatttactttt 25591398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 30645721 - 30645773
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaa-atgagattaacacagtcct 220  Q
    |||| ||||| || |||||||||||||||||||  ||||||||||||||||||    
T  30645721 tttacacatcctatatatttactttattgctaagttgagattaacacagtcct 30645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 293261 - 293374
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   |||||| |||||||||| ||||| ||||||||||||||| ||||    
T  293261 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttagtacacttgc 293360  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  293361 taaaatatctatca 293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 30655701 - 30655814
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  30655701 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagtacacttgc 30655800  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  30655801 taaaatatctatca 30655814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 24371352 - 24371433
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24371352 gattcgaaatacctagtctcatctctccatatattttccaaacaaatctttattttctgttatttactttta-tgcaatcaaa 24371433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 1125615 - 1125498
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  1125615 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcatgggaacgatatttttactacttcgatagtatttagtacacttgc 1125516  T
Q  265 taaaatatctatcagtaa 282  Q
    ||||||||||||||||||    
T  1125515 taaaatatctatcagtaa 1125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 9954206 - 9954319
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| |||||||| || |||||||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  9954206 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 9954305  T
Q  265 taaaatatctatca 278  Q
    ||||||||||||||    
T  9954306 taaaatatctatca 9954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 23382050 - 23381946
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  23382050 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttattacttcgatagtatttagtacacttgc 23381951  T
Q  265 taaaa 269  Q
    |||||    
T  23381950 taaaa 23381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 26942313 - 26942208
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcc---tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| |||||||||||||||||| ||| | ||||||||||||||||   ||||||| |||||||||| ||||| ||||||||||||||| ||||    
T  26942313 tttatacatcctaaatatttactttattgataatttgagattaacacagtccacgtgggaacaatatttttactacttcgatagtatttagtacacttgc 26942214  T
Q  265 taaaat 270  Q
    ||||||    
T  26942213 taaaat 26942208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 3596659 - 3596555
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||||| |   ||||||||||||||||| ||||| ||||||||||||| | ||||    
T  3596659 tttatacatcctaaatatttaccttattgctaaattgagattaacacagtctttgtgggaacgatatttttactacttcgatagtatttagtaaacttgc 3596560  T
Q  265 taaaa 269  Q
    |||||    
T  3596559 taaaa 3596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 11188078 - 11187962
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgata-tttttaccacttctatagtatttagtacatttg 263  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||   ||||||||||| ||||||| ||||| |||||||||||| || |||    
T  11188078 tttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttactacttcgatagtatttagtgcacttg 11187979  T
Q  264 ct-aaaatatctatcag 279  Q
    || ||||||||||||||    
T  11187978 ctaaaaatatctatcag 11187962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 23384630 - 23384526
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| || ||||||||||||||   ||||||||||||||||  ||||| ||||||||||||||| ||||    
T  23384630 tttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcgtgggaacgatatttttattacttcgatagtatttagtacacttgc 23384531  T
Q  265 taaaa 269  Q
    |||||    
T  23384530 taaaa 23384526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 5737942 - 5737836
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   || |||||||||||||| ||||| ||||||||||||||| |||     
T  5737942 tttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgcggaaacgatatttttactacttcgatagtatttagtacacttga 5737843  T
Q  265 taaaata 271  Q
    |||||||    
T  5737842 taaaata 5737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 11729210 - 11729116
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacag---tcctgggaacgatatttttaccacttctatagtatttagtaca 259  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||||   |  |||||||||||||||||  ||||| |||||||||||||||    
T  11729210 tttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacgatatttttattacttcgatagtatttagtaca 11729116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 2379474 - 2379579
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||| |||||||||||||| || |||||||||||| ||||||||||  |||||   ||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  2379474 tttacacatcttaaatattaaccttattgctaaattgagattaacagtgtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 2379573  T
Q  265 taaaat 270  Q
     |||||    
T  2379574 caaaat 2379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 18856028 - 18855890
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  |||||||||||||||||||     |||| |||| ||||||||    
T  18856028 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaaccaatctttattttctgttattgc---ttat-gcaaacaaaccaa 18855934  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||| | | |||||||||||||||||||||||    
T  18855933 tcaactgcctagcggccaattaaaagaacttttatacatcttaa 18855890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 22561108 - 22561022
Alignment:
Q  97 atctttattttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaaata 185  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| || ||  ||||| |||||||||||| | ||||||    
T  22561108 atctttattttctgttagttactttta-tgcaatcaaaccaatcaactgcctag-ggtaaaacaaaataacttttatacagcctaaata 22561022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 7128420 - 7128558
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  ||||  | |||||||||||||||||     |||| |||| |||| |||    
T  7128420 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaactaaactttattttctgttattgc---ttat-gcaaacaaatcaa 7128514  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  7128515 tcaactgcctagcggcaaattaaaagaacttttatacatcttaa 7128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 23008195 - 23008267
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    |||||||||||| |  |||||||||||    ||||||||||||| ||||||||||| ||||||||||||||||    
T  23008195 gattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttattttatgttatttacttttat 23008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 23780169 - 23780097
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    |||||||||||| |  |||||||||||    ||||||||||||| ||||||||||| ||||||||||||||||    
T  23780169 gattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttattttatgttatttacttttat 23780097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 23842669 - 23842617
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  23842669 tttatacatcctaaatatttattttattgctaaattgagattaacacagtcct 23842617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 11402503 - 11402608
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct---gggaacgatattttt-accacttctatagtatttagtacatttg 263  Q
    |||| ||||| ||||| || || ||||||||||| ||||||||||||||||||   ||||||||||||||| |  ||||| ||| ||||||||||| |||    
T  11402503 tttacacatcctaaattttaaccttattgctaaactgagattaacacagtccttgtgggaacgatattttttattacttcgataatatttagtacacttg 11402602  T
Q  264 ctaaaa 269  Q
    ||||||    
T  11402603 ctaaaa 11402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 17106613 - 17106519
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaa 134  Q
    ||||||||| ||||||||||||||| |  |||||||||||   |||||||| || |  ||||||||||| ||||||||| ||||| ||||||||||    
T  17106613 ggggaacatagatgattcgaaagacttgatctcatctctcttcatattttctaaccgaatctttattttatgttatttaatttta-tgcaatcaaa 17106519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 4512679 - 4512732
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||||||||||||| ||||||||||| | |||| ||||||| ||||||    
T  4512679 tgcaatcaaaccaatcaactgcctagtggcaaataaaaataacttttgtacatc 4512732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 24155188 - 24155139
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaa 269  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||||||||    
T  24155188 tgggaacgatatttttactacttcgatagtatttggtacacttgctaaaa 24155139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10290228 - 10290280
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| |||||||| |||||||||||||| ||||||||||||||||||    
T  10290228 tttatatatcctaaatattcactttattgctaaattgagattaacacagtcct 10290280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 13947139 - 13947268
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||| ||  | |||| |  ||||  |||||||||||||||||||     |||| |||| ||||||||    
T  13947139 ggggaacatagatgattcgaaagacctaaactcatctatctct-tattctttaaaccaatctttattttctgttattgc---ttat-gcaaacaaaccaa 13947233  T
Q  139 tcaactacctagtggcaattcaaaagaacttttat 173  Q
    |||||| ||||| ||||| | ||||||||||||||    
T  13947234 tcaactgcctagcggcaaattaaaagaacttttat 13947268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 23848025 - 23848077
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  23848025 tttatacatcctaaatatttactttagtgttaaattgagattaacacagtcct 23848077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 9839397 - 9839316
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 122  Q
    ||||||||| |||||||||||||||||  |||||||||| |  |||||||| ||||| | ||||||||||| ||||||| ||||    
T  9839397 ggggaacatagatgattcgaaagacctgatctcatctct-ctcatattttctaaaca-aactttattttcttttatttaatttt 9839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 19476304 - 19476362
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    |||||||||||||||||| ||||| ||||||||| ||||| |||| |||| |||||||||    
T  19476304 tgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatcag 19476362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 23008302 - 23008409
Alignment:
Q  169 tttatacatcttaaatatttactttattgc-taaatgagattaacacagtcc---tgggaacgatatt---tttaccacttctatagtatttagtacatt 261  Q
    |||| ||||| |||||||| |||||||||| ||| |||||||||||||||||   |||  ||||| ||   ||||| ||||| ||||||||||||||| |    
T  23008302 tttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacact 23008401  T
Q  262 tgctaaaa 269  Q
    ||||||||    
T  23008402 tgctaaaa 23008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 23780062 - 23779955
Alignment:
Q  169 tttatacatcttaaatatttactttattgc-taaatgagattaacacagtcc---tgggaacgatatt---tttaccacttctatagtatttagtacatt 261  Q
    |||| ||||| |||||||| |||||||||| ||| |||||||||||||||||   |||  ||||| ||   ||||| ||||| ||||||||||||||| |    
T  23780062 tttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacact 23779963  T
Q  262 tgctaaaa 269  Q
    ||||||||    
T  23779962 tgctaaaa 23779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 26896188 - 26896126
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||||| || |||||||||||||| |||||||| || |||||| ||||| ||||||||    
T  26896188 ttacttttattgaaa-caaaccaatcaactgcctagtggaaaatcaaaataacttctatacatc 26896126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 13947317 - 13947373
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||| |||||||||    
T  13947317 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatcag 13947373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 19476204 - 19476257
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||| ||||||||||    
T  19476204 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatc 19476257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 24400381 - 24400434
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||| ||||||||||    
T  24400381 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatc 24400434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 28230798 - 28230855
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| |||||||||  |||| ||||| | |||||||||||||||||||||||    
T  28230798 tgcaaacaaatcaatcaactgtctagcggcaaattaaaagaacttttatacatcttaa 28230855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 3826702 - 3826650
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaa-atgagattaacacagtcct 220  Q
    |||| ||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  3826702 tttacacatcctaaatattaactttattgctaagttgagattaacacagtcct 3826650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 7128602 - 7128650
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaat 270  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||||    
T  7128602 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 7128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 28230899 - 28230954
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  28230899 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatca 28230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 30655565 - 30655633
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttatttt 107  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||    
T  30655565 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 30655633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 34502657 - 34502704
Alignment:
Q  232 ttttaccacttctatagtatttagtacatttgctaaaatatctatcagt 280  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||    
T  34502657 ttttactacttcgatagt-tttagtacacttgctaaaatatctatcagt 34502704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 278
Target Start/End: Complemental strand, 3284 - 3048
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctcc-atatattttccaaacatatctttattttctgtt-atttacttttattgcaatcaaacca 137  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||| ||||| |||||| ||||||||| ||    
T  3284 gggaacattgatgactcgaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtttatttaattttat-gcaatcaaatca 3186  T
Q  138 atcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaat-------gagattaacacagtcct---gggaacg 227  Q
    |  | |||  ||     ||  ||||| ||  |||||||||| ||||||||||||  ||||||||||       |||||||||||||||||   |||||||    
T  3185 a--atcta--ta-----aa--caaaataa--tttatacatcctaaatatttactaaattgctaaattgagattgagattaacacagtcctcgtgggaacg 3099  T
Q  228 atatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  3098 atatttttactacttcgatagtatttagtacacttgctaaaatatctatca 3048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 3666 - 3554
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcctgg---gaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| |   ||||||||||||||  ||||| ||||||||||||||| ||||    
T  3666 tttatacatcttaattatttaccttattactaaattgagattaacacagtcctcgtgagaacgatatttttattacttcaatagtatttagtacacttgc 3567  T
Q  265 taaaatatctatc 277  Q
    |||||||||||||    
T  3566 taaaatatctatc 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 425 - 530
Alignment:
Q  168 ttttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttg 263  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||| ||   ||||||||||||||||| ||||| |||||||||||| || |||    
T  425 ttttttacatcttaaatatttactttatttctaaattgagattaacacagttctcgtgggaacgatatttttactacttcgatagtatttagtgcacttg 524  T
Q  264 ctaaaa 269  Q
    ||||||    
T  525 ctaaaa 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 5279 - 5166
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||   || |||||||||||||| ||||| || ||||||||| || ||||    
T  5279 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatatttttactacttcgatggtatttagtgcacttgc 5180  T
Q  265 taaaatatctatca 278  Q
    ||||| ||||||||    
T  5179 taaaaaatctatca 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 7715 - 7481
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctc-catata-ttttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    ||||||||| |||||||||||||||||  ||||||||||| | |||  |||| ||||  |||||||||||||||||||||||||||  ||||     |||    
T  7715 ggggaacatagatgattcgaaagacctgatctcatctctctcctattctttttcaaaactatctttattttctgttatttactttttatgcac----acc 7620  T
Q  137 aatcaactacctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcc---tgggaacgatatt 232  Q
    || | ||| ||| | |||| |  ||||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||   | ||||||| |      
T  7619 aacctactgcctcg-ggcact--aaaagaaattt-atacatcctaaatatttactttatttctaaattgagattaacacagtcctcataggaacgaca-- 7526  T
Q  233 tttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
     |||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  7525 -ttactacttcgatagtatttagtacacttgctaaaaaatctatca 7481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 19645 - 19752
Alignment:
Q  175 catcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtacatttgctaaaat 270  Q
    |||| |||||||| || ||| |||||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||| ||||| |||| |||||    
T  19645 catcctaaatattaacgttactgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 19744  T
Q  271 atctatca 278  Q
    ||||||||    
T  19745 atctatca 19752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 15531 - 15669
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    ||||||||| ||||||||||||||||||  ||||||||||  | |||| |  |||   ||||||||||||||||||| |||| |   |||| ||||||||    
T  15531 ggggaacatagatgattcgaaagacctaaactcatctctctct-tattctttaaatgaatctttattttctgttatt-acttat---gcaaacaaaccaa 15625  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||    
T  15626 tcaactgcctagcggcaaattaaaagaacttttatacatcttaa 15669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 15713 - 15769
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatcag 279  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||| |||||||||    
T  15713 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatcag 15769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 10528 - 10660
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||||||||||||||||||| |||||| ||||||||||  | |||| |  ||||  ||||||| ||||||||| ||    |||| | || ||||||||    
T  10528 ggggaacatcgatgattcgaaatacctagactcatctctctct-tattcttaaaaccaatctttaatttctgttaatt----ttat-gtaaacaaaccaa 10621  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  10622 tcaactgcctagtggcaa-tcaaaagaacttttatacatc 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 2739 - 2791
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2739 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 2620 - 2666
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatat 85  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  2620 ggggaacattgatgactcgaaagacctagtctcatctctccatatat 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 8089 - 8039
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtc 218  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8089 tttatacatcctaaatatttactttattgctaaattgagattaacacagtc 8039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 1419 - 1367
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||| ||||||    
T  1419 tttatacgtcctaaatatttactttattgctaaattgagattaacagagtcct 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 374 - 491
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaat-gagattaacacagtcct---gggaacgatattttt----accacttctatagtatttagtacat 260  Q
    |||| ||||| || ||||| || |||||||||||| |||||||||||||||||   |||||||||||||||    || ||||| ||||||||| |||||     
T  374 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttttttactacttcaatagtatttggtacac 473  T
Q  261 ttgctaaaatatctatca 278  Q
    |||| |||||||||||||    
T  474 ttgccaaaatatctatca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 57518 - 57449
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaaata 185  Q
    |||||||||| ||||||||||||||||||| |||||| ||||  ||||| |||||||||||||| ||||||    
T  57518 ttacttttat-gcaatcaaaccaatcaactgcctagtagcaaaacaaaataacttttatacatcctaaata 57449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 14322 - 14188
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaaccaa 138  Q
    |||||||||||||||||||||||||||  |||||||||| | | |||| |  ||||  ||||||||||||||||| || |||    ||||| ||||||||    
T  14322 ggggaacatcgatgattcgaaagacctgatctcatctct-cttttattcttaaaaccaatctttattttctgtta-ttgctt---atgcaaacaaaccaa 14228  T
Q  139 tcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||| |||||||| || | |||||||  ||||||||||    
T  14227 tcaactgcctagtggaaaattaaaagaatctttatacatc 14188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 65263 - 65191
Alignment:
Q  105 tttctgttatttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||||||| ||| |||||| |||||| || ||||||| | ||||||||||| |||||||||||||||||||||    
T  65263 tttctgttagttaattttat-gcaatcgaatcaatcaaattcctagtggcaaatcaaaagaacttttatacatc 65191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 48394 - 48311
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctg-ttatttacttttattgcaatcaaacc 136  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||| | |||||| ||| | ||||||||||||| ||||||||||||    
T  48394 gatttgaatgacctagtctcatctctccatatattttctaaaca-acctttatattccgtttatttactttta-tgcaatcaaacc 48311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 385 - 437
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  385 tttatacatcctaaatatttactatattgctaaattgagattaacacagtcct 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 10073 - 10156
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttattgcaatcaaacc 136  Q
    ||||| |||||| ||||||||||||||| ||| ||||||||||| || |||| ||| ||||||||||||||  ||||| ||||||    
T  10073 gattcaaaagacatagtctcatctctccttatcttttccaaaca-atatttaatttatgttatttactttttatgcaaacaaacc 10156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 27363 - 27415
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27363 tttacacatcctaaatatttactttattgctaaattgagattaacacagtcct 27415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 27228 - 27298
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  27228 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 27298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 58610 - 58551
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatac 175  Q
    |||||||||| |||| |||||||||||||| ||||||||||| |||||| |||||||||||    
T  58610 ttacttttat-gcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttatac 58551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 58522 - 58463
Alignment:
Q  203 tgagattaacacagtcct---gggaacgatatttttaccacttctatagtatttagtaca 259  Q
    ||||||||| ||||||||   ||||||||||||||||| ||||| ||||||||| |||||    
T  58522 tgagattaaaacagtccttttgggaacgatatttttactacttcgatagtatttggtaca 58463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 99226 - 99155
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    |||| ||||||||| |||||||||||||  || |||||||||  |||||| ||||||||||||||||||||||    
T  99226 gatttgaaagacctggtctcatctctcctcatcttttccaaaactatctt-attttctgttatttacttttat 99155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 118436 - 118365
Alignment:
Q  52 gattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttacttttat 124  Q
    ||||||||||||||  | ||||||||||  || ||||||| |  |||||| ||||||||||||||||||||||    
T  118436 gattcgaaagacctgatatcatctctcctcatcttttccagaactatctt-attttctgttatttacttttat 118365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 4107 - 4169
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    |||||||||| |||| ||||| |||||||| ||||||||||| |||||| ||||||||||||||    
T  4107 ttacttttat-gcaaacaaacaaatcaacttcctagtggcaaatcaaaataacttttatacatc 4169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 317 - 366
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagt 217  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  317 tttattcatcctaaatatttactttattgctaaattgagattaacacagt 366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 1894 - 1850
Alignment:
Q  220 tgggaacgatatttttaccacttctatagtatttagtacatttgc 264  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  1894 tgggaacgatatttttaccacttcgatagtatttggtacacttgc 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 248772 - 248824
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||||||| | ||||||||||||||||||||| |||||| |||||||||||    
T  248772 tttatacatccttaatatttactttattgctaaattgagatcaacacagtcct 248824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 248637 - 248707
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  248637 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaatcaaatctatattttct 248707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 242264 - 242322
Alignment:
Q  115 ttacttttattgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttata 174  Q
    |||||||||| |||||||||| |||||||| ||||||||||| |||||| ||| ||||||    
T  242264 ttacttttat-gcaatcaaacaaatcaactgcctagtggcaaatcaaaataacctttata 242322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 65 - 27
Alignment:
Q  40 gggaacatcgatgattcgaaagacctagtctcatctctc 78  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  65 gggaacatcgatgattcgaaagacctgatctcatctctc 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 198266 - 198336
Alignment:
Q  39 ggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttct 109  Q
    ||||||||| |||||||||||||||||  |||||||||||   |||||||| || || |||| ||||||||    
T  198266 ggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 198336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 198407 - 198448
Alignment:
Q  180 taaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  198407 taaatatttactttattgctaaattgaaattaacacagtcct 198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 19480 - 19533
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatc 178  Q
    ||||| |||||||||||||| ||||| ||||| | |||||||| ||||||||||    
T  19480 tgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatc 19533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 31295 - 31352
Alignment:
Q  125 tgcaatcaaaccaatcaactacctagtggcaattcaaaagaacttttatacatcttaa 182  Q
    ||||| |||| |||||||||  |||| ||||| | |||||||||||||||||||||||    
T  31295 tgcaaacaaatcaatcaactgtctagcggcaaattaaaagaacttttatacatcttaa 31352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 31396 - 31451
Alignment:
Q  222 ggaacgatatttttaccacttctatagtatttagtacatttgctaaaatatctatca 278  Q
    |||||||||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||    
T  31396 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa-atctatca 31451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 5604 - 5656
Alignment:
Q  169 tttatacatcttaaatatttactttattgctaaa-tgagattaacacagtcct 220  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||| ||||||||    
T  5604 tttatatatcctaaatatttactttattactaaattgagattaaaacagtcct 5656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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