View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9164_high_1 (Length: 778)

Name: NF9164_high_1
Description: NF9164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9164_high_1
NF9164_high_1
[»] chr7 (45 HSPs)
chr7 (14-778)||(28517371-28518138)
chr7 (22-193)||(5825117-5825288)
chr7 (22-174)||(40726572-40726724)
chr7 (40-174)||(45003007-45003141)
chr7 (22-171)||(21326930-21327079)
chr7 (22-164)||(982822-982964)
chr7 (22-164)||(19277164-19277308)
chr7 (30-124)||(48539094-48539188)
chr7 (27-145)||(45613939-45614057)
chr7 (22-144)||(24527482-24527604)
chr7 (103-189)||(38766172-38766258)
chr7 (22-131)||(4501165-4501274)
chr7 (22-123)||(27521385-27521486)
chr7 (22-171)||(25187023-25187172)
chr7 (22-125)||(23037457-23037560)
chr7 (114-189)||(38832150-38832225)
chr7 (58-132)||(27027758-27027832)
chr7 (22-171)||(5972308-5972457)
chr7 (62-145)||(45974731-45974814)
chr7 (22-144)||(10905011-10905133)
chr7 (22-123)||(43856788-43856889)
chr7 (52-147)||(41117892-41117988)
chr7 (22-125)||(22197899-22198001)
chr7 (22-125)||(22239820-22239922)
chr7 (82-171)||(2904247-2904335)
chr7 (81-137)||(38839226-38839282)
chr7 (22-123)||(34772696-34772797)
chr7 (55-123)||(5714954-5715022)
chr7 (114-190)||(36931887-36931962)
chr7 (52-131)||(32584506-32584585)
chr7 (22-124)||(42295276-42295378)
chr7 (60-125)||(9281266-9281331)
chr7 (60-125)||(9292237-9292302)
chr7 (61-146)||(29054740-29054825)
chr7 (404-506)||(38140319-38140421)
chr7 (52-124)||(30216180-30216252)
chr7 (79-167)||(37317861-37317949)
chr7 (44-87)||(38766259-38766302)
chr7 (52-147)||(43333952-43334047)
chr7 (472-506)||(7936106-7936140)
chr7 (347-428)||(24934710-24934792)
chr7 (459-505)||(29559217-29559263)
chr7 (459-497)||(35116937-35116975)
chr7 (468-505)||(28197999-28198036)
chr7 (460-505)||(28672301-28672346)
[»] chr6 (27 HSPs)
chr6 (14-190)||(17249389-17249565)
chr6 (22-186)||(33220803-33220967)
chr6 (22-164)||(34304369-34304511)
chr6 (81-190)||(7749328-7749437)
chr6 (52-171)||(3137369-3137488)
chr6 (24-180)||(357810-357966)
chr6 (22-125)||(959493-959595)
chr6 (22-132)||(32115623-32115733)
chr6 (346-503)||(6067499-6067657)
chr6 (416-496)||(30775245-30775325)
chr6 (60-171)||(34168787-34168897)
chr6 (22-122)||(4206688-4206788)
chr6 (60-171)||(28009117-28009228)
chr6 (22-147)||(29338171-29338296)
chr6 (23-130)||(34554370-34554476)
chr6 (82-171)||(28625797-28625886)
chr6 (22-122)||(4166014-4166114)
chr6 (403-445)||(19280049-19280091)
chr6 (36-174)||(28543260-28543398)
chr6 (124-190)||(32531042-32531108)
chr6 (23-75)||(5168166-5168218)
chr6 (22-72)||(45769-45819)
chr6 (459-501)||(30456784-30456826)
chr6 (23-116)||(3714838-3714931)
chr6 (347-400)||(6420321-6420374)
chr6 (347-384)||(24396881-24396918)
chr6 (459-500)||(29694604-29694645)
[»] chr4 (49 HSPs)
chr4 (14-190)||(3329843-3330019)
chr4 (14-190)||(53619433-53619609)
chr4 (14-190)||(50001010-50001186)
chr4 (9-174)||(39001260-39001425)
chr4 (20-190)||(23255560-23255730)
chr4 (22-179)||(4419122-4419278)
chr4 (22-189)||(55933552-55933719)
chr4 (27-187)||(48657012-48657170)
chr4 (22-147)||(34107788-34107913)
chr4 (22-145)||(50464388-50464511)
chr4 (29-171)||(30940831-30940973)
chr4 (69-174)||(31846966-31847071)
chr4 (60-147)||(50442609-50442696)
chr4 (22-131)||(53170418-53170528)
chr4 (22-174)||(26521352-26521503)
chr4 (22-171)||(600784-600933)
chr4 (89-174)||(12053330-12053415)
chr4 (24-145)||(16955352-16955473)
chr4 (373-499)||(37175727-37175854)
chr4 (24-190)||(46440983-46441149)
chr4 (14-142)||(50463030-50463155)
chr4 (22-115)||(56462198-56462291)
chr4 (374-446)||(39292298-39292371)
chr4 (30-122)||(38535669-38535760)
chr4 (99-171)||(40392723-40392795)
chr4 (26-174)||(6865916-6866062)
chr4 (403-501)||(44369026-44369126)
chr4 (115-190)||(41372253-41372328)
chr4 (22-131)||(7536663-7536772)
chr4 (43-128)||(18981652-18981735)
chr4 (26-147)||(23233211-23233331)
chr4 (81-149)||(2852323-2852391)
chr4 (52-144)||(8738098-8738190)
chr4 (102-190)||(12917896-12917984)
chr4 (408-505)||(50620637-50620734)
chr4 (68-171)||(23604956-23605059)
chr4 (89-164)||(47585167-47585242)
chr4 (22-129)||(54190943-54191050)
chr4 (460-505)||(4068383-4068428)
chr4 (22-123)||(34213534-34213634)
chr4 (365-446)||(24943598-24943681)
chr4 (55-162)||(16009242-16009347)
chr4 (22-97)||(28739845-28739920)
chr4 (81-124)||(45661604-45661647)
chr4 (86-125)||(50351146-50351185)
chr4 (62-124)||(9601122-9601184)
chr4 (78-123)||(1041339-1041384)
chr4 (123-188)||(28977286-28977351)
chr4 (55-125)||(49354191-49354265)
[»] chr3 (40 HSPs)
chr3 (14-190)||(26772605-26772781)
chr3 (24-190)||(38670974-38671140)
chr3 (22-171)||(32546661-32546810)
chr3 (22-174)||(39583321-39583473)
chr3 (15-146)||(26856847-26856978)
chr3 (22-171)||(53785575-53785724)
chr3 (22-145)||(37133091-37133214)
chr3 (22-171)||(44198633-44198782)
chr3 (22-171)||(44699-44851)
chr3 (25-171)||(4763888-4764033)
chr3 (22-136)||(13582411-13582525)
chr3 (22-147)||(52741604-52741729)
chr3 (22-124)||(3443404-3443506)
chr3 (22-174)||(25324893-25325044)
chr3 (26-129)||(4472970-4473073)
chr3 (22-147)||(38978891-38979016)
chr3 (55-147)||(4669788-4669880)
chr3 (84-131)||(5338552-5338599)
chr3 (29-124)||(38145969-38146064)
chr3 (60-171)||(46940903-46941014)
chr3 (22-125)||(52411983-52412086)
chr3 (81-147)||(26276505-26276571)
chr3 (23-125)||(25094665-25094767)
chr3 (30-124)||(32690966-32691060)
chr3 (14-124)||(21552577-21552691)
chr3 (56-132)||(26393812-26393888)
chr3 (94-182)||(50657232-50657320)
chr3 (22-78)||(51234575-51234631)
chr3 (459-498)||(30076557-30076596)
chr3 (81-171)||(2601695-2601785)
chr3 (36-174)||(8592004-8592141)
chr3 (385-499)||(36924534-36924647)
chr3 (82-124)||(49017880-49017922)
chr3 (22-123)||(7900772-7900873)
chr3 (29-125)||(7257655-7257751)
chr3 (23-115)||(25190027-25190119)
chr3 (22-130)||(37992240-37992347)
chr3 (26-124)||(464977-465075)
chr3 (459-505)||(50173437-50173483)
chr3 (459-505)||(54404313-54404359)
[»] chr5 (34 HSPs)
chr5 (26-190)||(35310295-35310459)
chr5 (14-188)||(430451-430625)
chr5 (22-188)||(25663124-25663290)
chr5 (14-183)||(33692139-33692305)
chr5 (14-187)||(13166994-13167167)
chr5 (14-190)||(27336542-27336716)
chr5 (29-147)||(2566194-2566312)
chr5 (94-188)||(2917524-2917619)
chr5 (22-144)||(42921591-42921712)
chr5 (22-130)||(22188747-22188855)
chr5 (52-123)||(32269919-32269990)
chr5 (344-494)||(2523757-2523908)
chr5 (26-137)||(26212679-26212790)
chr5 (52-172)||(23023460-23023580)
chr5 (52-123)||(15292147-15292218)
chr5 (22-132)||(37873730-37873840)
chr5 (90-147)||(11005768-11005825)
chr5 (367-504)||(34903324-34903462)
chr5 (22-145)||(8100446-8100567)
chr5 (32-146)||(15506717-15506831)
chr5 (463-503)||(9765021-9765061)
chr5 (24-126)||(38875552-38875651)
chr5 (85-122)||(12033346-12033383)
chr5 (23-124)||(19260217-19260318)
chr5 (93-162)||(23092694-23092763)
chr5 (90-171)||(35455840-35455921)
chr5 (474-506)||(8313059-8313091)
chr5 (347-499)||(41174296-41174449)
chr5 (197-232)||(8111772-8111807)
chr5 (89-132)||(14423592-14423635)
chr5 (43-122)||(22819751-22819830)
chr5 (346-400)||(18650184-18650238)
chr5 (404-442)||(41383509-41383547)
chr5 (468-497)||(38328718-38328747)
[»] chr8 (42 HSPs)
chr8 (14-190)||(39434516-39434690)
chr8 (22-172)||(38815159-38815309)
chr8 (26-146)||(3187861-3187980)
chr8 (36-190)||(42659074-42659228)
chr8 (22-171)||(18804479-18804627)
chr8 (52-147)||(22589458-22589553)
chr8 (22-147)||(37514111-37514236)
chr8 (22-147)||(4699761-4699885)
chr8 (78-171)||(24320203-24320296)
chr8 (22-106)||(3821155-3821239)
chr8 (22-141)||(6592472-6592590)
chr8 (61-166)||(8882215-8882320)
chr8 (22-123)||(9259384-9259485)
chr8 (353-505)||(15808655-15808808)
chr8 (90-171)||(18596759-18596840)
chr8 (22-118)||(24124947-24125043)
chr8 (104-183)||(44337194-44337272)
chr8 (343-486)||(45312798-45312934)
chr8 (371-501)||(3036466-3036596)
chr8 (52-122)||(24451036-24451105)
chr8 (424-500)||(45312730-45312805)
chr8 (43-168)||(25021927-25022052)
chr8 (53-145)||(4066738-4066829)
chr8 (344-446)||(29912103-29912204)
chr8 (61-144)||(6618178-6618261)
chr8 (365-441)||(3049097-3049174)
chr8 (81-144)||(8227986-8228049)
chr8 (22-124)||(28196105-28196207)
chr8 (459-508)||(37953234-37953283)
chr8 (52-112)||(121843-121903)
chr8 (81-125)||(500154-500198)
chr8 (23-106)||(3863245-3863331)
chr8 (61-141)||(6792165-6792245)
chr8 (88-123)||(24350880-24350915)
chr8 (94-145)||(26033676-26033727)
chr8 (347-394)||(32615801-32615848)
chr8 (347-394)||(41235921-41235968)
chr8 (22-144)||(4073427-4073549)
chr8 (52-142)||(8714725-8714814)
chr8 (459-505)||(39082531-39082577)
chr8 (22-171)||(5329694-5329843)
chr8 (459-503)||(7176572-7176617)
[»] chr1 (31 HSPs)
chr1 (22-190)||(34644413-34644581)
chr1 (14-190)||(47459530-47459705)
chr1 (81-190)||(5453942-5454051)
chr1 (20-188)||(48841172-48841340)
chr1 (22-171)||(22346761-22346910)
chr1 (26-147)||(24177607-24177728)
chr1 (52-171)||(868525-868642)
chr1 (22-144)||(2764372-2764494)
chr1 (22-147)||(20259889-20260014)
chr1 (22-147)||(21472893-21473018)
chr1 (22-145)||(28041219-28041342)
chr1 (23-171)||(31737416-31737563)
chr1 (60-171)||(30688423-30688534)
chr1 (85-147)||(1114023-1114085)
chr1 (22-144)||(2898595-2898717)
chr1 (58-149)||(21934265-21934357)
chr1 (81-171)||(28493482-28493572)
chr1 (90-171)||(19035345-19035426)
chr1 (52-131)||(45659768-45659847)
chr1 (22-147)||(4862081-4862207)
chr1 (97-171)||(7213109-7213183)
chr1 (82-124)||(45835338-45835380)
chr1 (62-171)||(25375961-25376072)
chr1 (67-129)||(4611097-4611159)
chr1 (82-140)||(7483781-7483839)
chr1 (459-505)||(36995219-36995265)
chr1 (36-123)||(6670211-6670298)
chr1 (88-130)||(16323961-16324003)
chr1 (85-147)||(17077971-17078033)
chr1 (95-168)||(18802924-18802996)
chr1 (456-493)||(41024759-41024795)
[»] chr2 (40 HSPs)
chr2 (22-190)||(28224847-28225015)
chr2 (44-179)||(27494169-27494304)
chr2 (22-171)||(17344504-17344653)
chr2 (22-147)||(4413158-4413283)
chr2 (12-145)||(13413243-13413376)
chr2 (22-147)||(41868000-41868124)
chr2 (25-147)||(9685510-9685632)
chr2 (22-130)||(27502269-27502377)
chr2 (22-105)||(44686348-44686431)
chr2 (22-146)||(18745046-18745170)
chr2 (85-171)||(15515302-15515388)
chr2 (92-171)||(3208406-3208485)
chr2 (17-144)||(11921297-11921418)
chr2 (96-171)||(30602355-30602430)
chr2 (22-147)||(7760937-7761062)
chr2 (100-174)||(41702135-41702209)
chr2 (104-164)||(20143119-20143179)
chr2 (22-144)||(5532314-5532435)
chr2 (91-141)||(42122713-42122763)
chr2 (27-125)||(44684955-44685053)
chr2 (28-129)||(1296175-1296276)
chr2 (59-124)||(10296655-10296720)
chr2 (22-123)||(16351936-16352037)
chr2 (119-174)||(10587144-10587199)
chr2 (52-123)||(23485058-23485129)
chr2 (123-190)||(38723985-38724052)
chr2 (22-124)||(3825639-3825741)
chr2 (26-124)||(19161879-19161977)
chr2 (349-394)||(1900623-1900668)
chr2 (94-147)||(32612326-32612379)
chr2 (22-105)||(32029178-32029261)
chr2 (14-73)||(34814902-34814961)
chr2 (459-506)||(39792069-39792116)
chr2 (345-492)||(42088433-42088581)
chr2 (407-446)||(44949247-44949286)
chr2 (78-132)||(26407842-26407896)
chr2 (36-122)||(33283517-33283603)
chr2 (96-190)||(34250153-34250247)
chr2 (459-505)||(39575461-39575507)
chr2 (417-446)||(13266462-13266491)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-171)||(102972-103121)
[»] scaffold0148 (1 HSPs)
scaffold0148 (22-171)||(33116-33265)
[»] scaffold0406 (1 HSPs)
scaffold0406 (88-171)||(6754-6837)
[»] scaffold1768 (1 HSPs)
scaffold1768 (22-125)||(276-379)
[»] scaffold0309 (1 HSPs)
scaffold0309 (85-147)||(5214-5276)
[»] scaffold0470 (1 HSPs)
scaffold0470 (61-144)||(7496-7579)
[»] scaffold0490 (1 HSPs)
scaffold0490 (22-92)||(6279-6349)
[»] scaffold0244 (1 HSPs)
scaffold0244 (83-147)||(16807-16871)
[»] scaffold0514 (1 HSPs)
scaffold0514 (61-141)||(4378-4458)


Alignment Details
Target: chr7 (Bit Score: 630; Significance: 0; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 630; E-Value: 0
Query Start/End: Original strand, 14 - 778
Target Start/End: Original strand, 28517371 - 28518138
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28517371 cagagacagttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatgttgtgtttacgaggattggttttgc 28517470  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaatagaaactattccactataataata 213  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28517471 catccaaaaaagtctagcgacacagcttgttgcccgtctgcctcctattcatgtgtaagtaatattgatagtaaatagaaactattccactataataata 28517570  T
Q  214 acaatataagttaaatcttccaannnnnnnaaccaaatgcgataaaataagcatactattagctaaatacaatnnnnnnn--ttaaaagagagacatgtt 311  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  28517571 acaatataagttaaatcttccaatttttttaaccaaatgcgataaaataagcatactattagctaaatacaataaaaaaaaattaaaagagagacatgtt 28517670  T
Q  312 agtacccatcttgatgctagtaataatgaaatggaaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaacttaccttaaaaat 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28517671 agtacccatcttgatgctagtaataatgaaatggaaaatgttaacaagtgccataaggacacttgataaaaagcttaaagtagcaacttaccttaaaaat 28517770  T
Q  412 tatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttcc-ttttttgaatccttaacaagtgccctaaaagta 510  Q
    ||| |||||||||||||||||||||||||||||||       | |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  28517771 tatatattcaacttattgaaagattaaaaagcaactttttttacatgaaatttaacaattatttccattttttgaatccttaacaagtgccctaaaggta 28517870  T
Q  511 tttattaggataatcctaataatatttctaatggttactttctattactaatggatgataagattgtgtttgagtgaaaacattttttatccaagtgtgt 610  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28517871 tttattaggataaccctaataatatttctaatggttgctttctattactaatggatgataagattgtgtttgagtgaaaacattttttatccaagtgtgt 28517970  T
Q  611 gtttcatttgggttatacttgaagctaagcccattattaagcctaagtagtcaatattgtacggctaaaacgcttgcattggaattcaaggaatagggtg 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28517971 gtttcatttgggttatacttgaagctaagcccattattaagcctaagtagtcaatattgtacggctaaaacgcttgcattggaattcaaggaatagggtg 28518070  T
Q  711 ttcataatatcaagggctctttgttttcaagcaataatctatactatacttgatagtgatgtgtgtct 778  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28518071 ttcataatatcaagggctctttgttttcaagcaataatctatactatacttgatagtgatgtgtgtct 28518138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 22 - 193
Target Start/End: Complemental strand, 5825288 - 5825117
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| |||    
T  5825288 gttgaccttctacatagagtcgaaagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgtttacgaggattggttttgccatcgaaa 5825189  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaatagaa 193  Q
    |||||||  || ||||||||||| ||||  ||||||||||||||||||||| | |||||||||| |||||||    
T  5825188 aaggtcttacggcgcagcttgttacctgcttgcctcctattcatgtgtaagaaatattgatagttaatagaa 5825117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 40726572 - 40726724
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||  | ||||||||||||||||| |||||||| ||||||||||||||    
T  40726572 gttgaccttctacatagagtccaaagggttatgcataacaatgctatgtctcctagatccatgaatgttgtgtttatgaggattgattttgccatccaaa 40726671  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    || ||||| |  |||||||||||||| |  |||||||||||||||||||||||    
T  40726672 aatgtctaacatcgcagcttgttgcccgcttgcctcctattcatgtgtaagta 40726724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 45003007 - 45003141
Alignment:
Q  40 gtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagc 139  Q
    |||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  45003007 gtccaaagagttatgcatagcaatgttatgtctcataggaccatgaatgttgtgtttacgaagattgattttgccatccaaaaaggtctagcggcgcagc 45003106  T
Q  140 ttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    || ||| | |  |||||||||||||||||||||||    
T  45003107 ttattgtccgcttgcctcctattcatgtgtaagta 45003141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 21326930 - 21327079
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||| ||| |||||| ||||  || ||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||||    
T  21326930 gttgaccttttacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgttcacgaggattgattttgccatccaaa 21327029  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||| || |||||||||||| |||  ||||| ||||||| ||||||    
T  21327030 aaggtctaacggcgcagcttgttgtctgcttgccttctattcaagtgtaa 21327079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 982964 - 982822
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||| |||||||| |||||| ||||  || ||||||| |||||| |||||| ||| || ||||||||||||||| |||||||||||| ||||||||||||    
T  982964 gttggccttctacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgttcacgaggattggtattgccatccaaa 982865  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattca 164  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||    
T  982864 aaggtctagcgacacagcttgttgcctgtttgccttctattca 982822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 19277308 - 19277164
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttac--gaggattggttttgccatcca 119  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||| || ||||||||||||||| ||  ||  |||||||||||||||||    
T  19277308 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacacgaaaattggttttgccatcca 19277209  T
Q  120 aaaaggtctagcgacgcagcttgttgcctgtctgcctcctattca 164  Q
    ||||||||||||| |||||||| ||||| | |||||| |||||||    
T  19277208 aaaaggtctagcggcgcagcttattgcccgcctgccttctattca 19277164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 48539188 - 48539094
Alignment:
Q  30 tctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||| |||||||||||  || |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  48539188 tctacatagagtccaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaag 48539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 45613939 - 45614057
Alignment:
Q  27 ccttctacgtagagtccaaagagtt-atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||||| |||||| |||| |||| ||||||| |||||| |  ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  45613939 ccttctacatagagttcaaa-agttcatgcataacaatgtcaaatctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccgaaaagg 45614037  T
Q  126 tctagcgacgcagcttgttg 145  Q
    ||||||| ||||||||||||    
T  45614038 tctagcggcgcagcttgttg 45614057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 24527604 - 24527482
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| || ||||||  || |||||||||||| || |||||||||||||||| ||||||||    
T  24527604 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatttctccttggtccatgaatgttgtattcacgaggattggttttgtcatccaaa 24527505  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    ||| ||||||| |||||||||||    
T  24527504 aagatctagcggcgcagcttgtt 24527482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 38766258 - 38766172
Alignment:
Q  103 attggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaat 189  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  38766258 attggttttgccatccaaaaaggtctagctgcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaatattgatagtaaat 38766172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 4501274 - 4501165
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagtt-atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaa 120  Q
    ||||||||||||| |||||| |||| |||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||| | |||| |||| ||    
T  4501274 gttgaccttctacatagagttcaaa-agttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgtttacgaggattagctttgtcatctaa 4501176  T
Q  121 aaaggtctagc 131  Q
    |||||||||||    
T  4501175 aaaggtctagc 4501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 27521486 - 27521385
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||| |||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||| |||    
T  27521486 gttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaagtctatgaatgttgtgtttacgaggattgattttgccatcgaaa 27521387  T
Q  122 aa 123  Q
    ||    
T  27521386 aa 27521385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 25187023 - 25187172
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||  |||||| ||||  || |||||||||||||| ||||||||||  | |||||||||||||||  | | ||||| |||| ||||| |||    
T  25187023 gttgaccttctatatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgttcccaatgattgattttaccatctaaa 25187122  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||| ||||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  25187123 aagatctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 25187172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 23037560 - 23037457
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||| ||||||||| || ||||| ||||||||||||||||| || |||| || ||  |||||| |||||||||||||||||| |||||||||| |||    
T  23037560 gttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaattttgtgtttacgaggattgattttgccatctaaa 23037461  T
Q  122 aagg 125  Q
    ||||    
T  23037460 aagg 23037457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 38832225 - 38832150
Alignment:
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaat 189  Q
    ||||||||||||||||||| |||||||||||||| |  |||||||||||||| |||||||| ||||||||||||||    
T  38832225 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatatgtaagtaatattgatagtaaat 38832150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 27027758 - 27027832
Alignment:
Q  58 agcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcg 132  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgctatccaaaaagatctagcg 27027832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 5972308 - 5972457
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||| ||||| || ||||| |  |  |||||||||||||||||||||||| |||||||||||||||    
T  5972308 gttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcccagatctatgaatgttgtgtttacgaggattagttttgccatccaaa 5972407  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||  ||| ||| ||| ||| || || || ||||| ||||||| ||||||    
T  5972408 aagacctaacgatgcaacttatttcccgtatgccttctattcaagtgtaa 5972457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 45974731 - 45974814
Alignment:
Q  62 atgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttg 145  Q
    |||| |||||||||| ||||||||||||||||||||| |||||   ||||| ||||||||||||||||| | ||||||||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttacaaggataaattttgtcatccaaaaaggtctagtggcgcagcttgttg 45974814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 10905133 - 10905011
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| |||||||  ||||||| |||||| |||||||||| || ||||||||| |||||||| ||||||| | |  |||||||||    
T  10905133 gttgaccttctacatagagttcaaagagccatgcataacaatgtcatgtctcctaggtccatgaatgtcgtgtttacaaggattgatctgaccatccaaa 10905034  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    |||  ||||   |||||||||||    
T  10905033 aagacctagtagcgcagcttgtt 10905011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 43856889 - 43856788
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| || ||||| | |||||| ||| |||||| || |||||||||| |||||||||| |||| |||||| |||||||    
T  43856889 gttgaccttctacatagagttcaaagggtcatgcacaacaatgtcatgactcctaggtccatgaatgttatgtttacgagaattgattttgctatccaaa 43856790  T
Q  122 aa 123  Q
    ||    
T  43856789 aa 43856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 41117892 - 41117988
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgca-gcttgttgcc 147  Q
    |||||||||||||| |||| ||||| || ||||||||||||||| |||| ||||| |||||| ||||||||| ||| |||| |||| ||||||||||    
T  41117892 atgcatagcaatgtcatgtttcctaggtccatgaatgttgtgttcacgatgattgattttgctatccaaaaaagtccagcggcgcaggcttgttgcc 41117988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 22198001 - 22197899
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  |||||| ||||||| || |||||||||| ||  |||||||||||||||||||  |||| ||||| ||||||||    
T  22198001 gttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaaa 22197903  T
Q  122 aagg 125  Q
    ||||    
T  22197902 aagg 22197899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 22239820 - 22239922
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  |||||| ||||||| || |||||||||| ||  |||||||||||||||||||  |||| ||||| ||||||||    
T  22239820 gttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaaa 22239918  T
Q  122 aagg 125  Q
    ||||    
T  22239919 aagg 22239922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 2904335 - 2904247
Alignment:
Q  82 atgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| ||| | || ||||||||| |||| || || ||||||||||||||    
T  2904335 atgaatgttgtgtttacgataattggttttgctatccaaaaaggt-tagtggcgtagcttgttgtctgtatgtcttctattcatgtgtaa 2904247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 38839282 - 38839226
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgca 137  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||    
T  38839282 catgaatgttgtgtttacgaagattggttttaccatccaaaaatgtctaacgacgca 38839226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 34772797 - 34772696
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| || | | |||| ||| ||||||| |||||| |||| | ||| || ||||||| ||||||||||||  |||||||||||||| ||||    
T  34772797 gttgaccttctacataaacttcaaaaagtcatgcatatcaatgtcatgttttctaggtccatgaatattgtgtttacgataattggttttgccattcaaa 34772698  T
Q  122 aa 123  Q
    ||    
T  34772697 aa 34772696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 5715022 - 5714954
Alignment:
Q  55 catagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    |||| ||||||||||||||||| || ||| ||||||||||||| || ||||||||||| |||| |||||    
T  5715022 cataacaatgttatgtctcctaggtccataaatgttgtgtttatgaagattggttttgtcatctaaaaa 5714954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 36931887 - 36931962
Alignment:
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||| ||||||| |||||||||||  | |  |||||||||||||| |||||||| |||||||||||||||    
T  36931887 catccaaaaag-tctagcggcgcagcttgttatccgcttgcctcctattcatatgtaagtaatattgatagtaaata 36931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 32584585 - 32584506
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagc 131  Q
    ||||||| |||||||||||||| ||  |  ||||||||||||||||| | ||||| |||| ||||||||||||| |||||    
T  32584585 atgcatatcaatgttatgtctcatagatcgatgaatgttgtgtttacaaagattgattttaccatccaaaaaggcctagc 32584506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 42295276 - 42295378
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||| || ||||   | ||||||| || ||| |||||||||| || ||||||| |||||||||||| |||| ||||||  |||||||    
T  42295276 gttgaccttctacatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgtttacgatgattagttttgttatccaaa 42295375  T
Q  122 aag 124  Q
    |||    
T  42295376 aag 42295378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 9281266 - 9281331
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||| ||| ||| ||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  9281266 caatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgcaatccaaaaagg 9281331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 9292237 - 9292302
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||| ||| ||| ||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  9292237 caatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgcaatccaaaaagg 9292302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 29054825 - 29054740
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgc 146  Q
    |||||| | ||||||| ||  |||||||| || |||| ||||||||||||||||||||| |||||  ||||| |||||||| ||||    
T  29054825 aatgttgtatctcctaggtctatgaatgtagtttttaagaggattggttttgccatccataaaggattagcggcgcagcttattgc 29054740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 506
Target Start/End: Complemental strand, 38140421 - 38140319
Alignment:
Q  404 ttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtgccct 503  Q
    ||||||||| ||||||  ||||||||||| || |||||| |||       | || ||||||||||||| ||||||| |||||||| ||||| ||||||||    
T  38140421 ttaaaaattgtgtatttgacttattgaaatatcaaaaagtaacattttctacataaaatttaacaattgtttccttctttgaatctttaactagtgccct 38140322  T
Q  504 aaa 506  Q
    |||    
T  38140321 aaa 38140319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 30216180 - 30216252
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||||||||||||| || ||||||| ||  |||||||||||||| |||||||| | ||||| ||| |||||||    
T  30216180 atgcatagcaatgtcatatctcctaggtctatgaatgttgtgttcacgaggatcgattttgtcattcaaaaag 30216252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 37317861 - 37317949
Alignment:
Q  79 ttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgt 167  Q
    ||||||||| |||| |||| |||||||| |||||| ||| ||||||||||| |||| || ||||||   |||||| || ||||||||||    
T  37317861 ttcatgaatattgtatttaagaggattgattttgcaatctaaaaaggtctaacgacacaacttgttatttgtctgtcttctattcatgt 37317949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 38766302 - 38766259
Alignment:
Q  44 aaagagttatgcatagcaatgttatgtctcctaagttcatgaat 87  Q
    |||| |||||||||||||||||||||||||||| || |||||||    
T  38766302 aaagggttatgcatagcaatgttatgtctcctaggtccatgaat 38766259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 43333952 - 43334047
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||| |||||  ||||||||||  |  |||||||||| ||||| || ||||||||||||||| |||||||   | ||| ||||||||||||||    
T  43333952 atgcatatcaatgacatgtctcctagatctatgaatgttgagtttatgatgattggttttgccattcaaaaagacttggcggcgcagcttgttgcc 43334047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 7936106 - 7936140
Alignment:
Q  472 atttccttttttgaatccttaacaagtgccctaaa 506  Q
    ||||||| |||||||||||||||||||||||||||    
T  7936106 atttcctcttttgaatccttaacaagtgccctaaa 7936140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 347 - 428
Target Start/End: Original strand, 24934710 - 24934792
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaac-ttaccttaaaaattatgtattcaacttatt 428  Q
    ||||| ||||||||| | ||| |||| ||||||| ||| ||||||||||||| ||| |||| ||||| || ||||||||||||    
T  24934710 aaatgctaacaagtgtcctaatggcaattgataagaagtttaaagtagcaactttatcttagaaattgtgcattcaacttatt 24934792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 505
Target Start/End: Original strand, 29559217 - 29559263
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||    
T  29559217 aaatttatcaattatttatatttttgaatccttaacaagtgccctaa 29559263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 497
Target Start/End: Original strand, 35116937 - 35116975
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaag 497  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  35116937 aaatttataaattatttccttttttgaatccttaacaag 35116975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 505
Target Start/End: Complemental strand, 28198036 - 28197999
Alignment:
Q  468 aattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  28198036 aattatttcctcttttgaatccttaacaagtgcactaa 28197999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 505
Target Start/End: Complemental strand, 28672346 - 28672301
Alignment:
Q  460 aatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||| |||||| || ||||||||||| ||||||||||||||||    
T  28672346 aatttaaaaattatctcattttttgaatctttaacaagtgccctaa 28672301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 1e-68; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 17249389 - 17249565
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17249389 cagaggcagttgaccttctacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 17249488  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||    
T  17249489 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtataagtaatattgatagtaaata 17249565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 33220803 - 33220967
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| || ||||||||| |||||||||||||||||| ||||| ||| || ||||||||||| ||||||||  |||||||||||||||| ||    
T  33220803 gttgaccttctacatatagtccaaagggttatgcatagcaatgttgtgtcttctaggtccatgaatgttgcgtttacgataattggttttgccatcctaa 33220902  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagta 186  Q
    ||||||||||| |||||||||||| | |  ||||||||||||||||||||||| |||||||||||    
T  33220903 aaggtctagcggcgcagcttgttggccgcttgcctcctattcatgtgtaagtaatattgatagta 33220967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 34304511 - 34304369
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||||||||||||||||||||||||| | ||||||| || ||  ||||||||||| ||||||||||||| |||||| |||||||    
T  34304511 gttgaccttctacatagagtccaaagagttatgcatagcaatatcatgtctcataggtctatgaatgttgtatttacgaggattgattttgcaatccaaa 34304412  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattca 164  Q
    ||||| ||||| | ||  |||||||| ||||||||||||||||    
T  34304411 aaggtatagcggcacaaattgttgcccgtctgcctcctattca 34304369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 7749437 - 7749328
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattg 180  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| |  |||||||||||||||||||| || |||||    
T  7749437 catgaatgttgtgtttacgaggattggttttgccatcctaaaaggtctagcggtgcagcttgttgcccgcttgcctcctattcatgtgtaactaatattg 7749338  T
Q  181 atagtaaata 190  Q
    ||||||||||    
T  7749337 atagtaaata 7749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 52 - 171
Target Start/End: Original strand, 3137369 - 3137488
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtc 151  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||  ||||   ||| ||||||||| ||     
T  3137369 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaggcttagcagtgcaacttgttgcccgtt 3137468  T
Q  152 tgcctcctattcatgtgtaa 171  Q
    ||||| | ||||||||||||    
T  3137469 tgccttccattcatgtgtaa 3137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 357810 - 357966
Alignment:
Q  24 tgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||| |||||||||||   ||| ||||||||||||||| ||||||| || |||||||||||||||||||| ||||  |||||||||| |||||    
T  357810 tgaccttctacatagagtccaaatgattaagcatagcaatgttatctctcctaggtccatgaatgttgtgtttacgaagattaattttgccatctaaaaa 357909  T
Q  124 ggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattg 180  Q
     || ||||| |  ||||||||| | || || ||||||||||| |||||||| |||||    
T  357910 tgtatagcggcatagcttgttgtcggtttgtctcctattcatatgtaagtaatattg 357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 959595 - 959493
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||||| ||| ||||  || ||||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||| |||| |||    
T  959595 gttgaccttctacgta-agttcaaaaggtcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattgattttgtcatctaaa 959497  T
Q  122 aagg 125  Q
    ||||    
T  959496 aagg 959493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 32115733 - 32115623
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||  ||||| ||||  || ||||||| |||||| |||||||||| || |||||||||||||||||||| ||||| |||||| ||| |||    
T  32115733 gttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgctatctaaa 32115634  T
Q  122 aaggtctagcg 132  Q
    |||||||||||    
T  32115633 aaggtctagcg 32115623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 346 - 503
Target Start/End: Complemental strand, 6067657 - 6067499
Alignment:
Q  346 aaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagca 444  Q
    |||||| ||||||||||| ||| | | |||||||| || | ||||||| |||||| | |||| ||||| |||||||||||||||||| |||||||||| |    
T  6067657 aaaatgctaacaagtgccctaacgacccttgataagaaacataaagtatcaactttatcttagaaattgtgtattcaacttattgaacgattaaaaagaa 6067558  T
Q  445 acnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtgccct 503  Q
    ||       | |||||||||||||||||||| ||||||| | || ||||||||||||||    
T  6067557 actttttctacatgaaatttaacaattattttcttttttaagtctttaacaagtgccct 6067499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 30775245 - 30775325
Alignment:
Q  416 tattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaa 496  Q
    ||||||||||||||||||||||||||  |||       |||||||||||||||||||||| ||||||||||||||||||||    
T  30775245 tattcaacttattgaaagattaaaaaataactttttctatatgaaatttaacaattattttcttttttgaatccttaacaa 30775325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 34168897 - 34168787
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcct 159  Q
    |||||| ||| ||||||  | ||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||| ||||| ||| |  ||||| ||    
T  34168897 caatgtcatgactcctagatccatgaatgttgtgtt-acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttct 34168799  T
Q  160 attcatgtgtaa 171  Q
    ||||||||||||    
T  34168798 attcatgtgtaa 34168787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 4206688 - 4206788
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||  |||||| ||||| |||| ||  |||||| | |||||||||||||||||||||||||||||||    
T  4206688 gttgaccttctacatagagttcaaaaggtcatgcatgacaatgtcatgtcacctaggtcaatgaatatagtgtttacgaggattggttttgccatccaaa 4206787  T
Q  122 a 122  Q
    |    
T  4206788 a 4206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 28009117 - 28009228
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcct 159  Q
    |||||| ||| |||||| || |||||| ||||| ||||| || |||| |||||| ||||||||||| ||| ||||||||||| ||| | || ||||| ||    
T  28009117 caatgtcatgactcctaggtccatgaacgttgtctttaccagaattgattttgcaatccaaaaaggcctaacgacgcagcttattgtccgtttgccttct 28009216  T
Q  160 attcatgtgtaa 171  Q
    ||||||||||||    
T  28009217 attcatgtgtaa 28009228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 29338171 - 29338296
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||  || ||||| || ||||| | |||||| ||| |||||| || |||||||||||||||||| ||||||| |||| | |||||||    
T  29338171 gttgaccttctacatatggttcaaagggtcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgtttacaaggattgatttttctatccaaa 29338270  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    | || |||||   |||||||||||||    
T  29338271 atggcctagcagtgcagcttgttgcc 29338296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 34554370 - 34554476
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    ||||| |||||| ||||||  |||  || ||| |||||||| | ||||||| ||||| ||||||| |||||||||||||||||| ||||| |||||||||    
T  34554370 ttgactttctacatagagtttaaaaggtcatgtatagcaatatcatgtctcgtaagt-catgaattttgtgtttacgaggattgattttgtcatccaaaa 34554468  T
Q  123 aggtctag 130  Q
    ||| ||||    
T  34554469 aggcctag 34554476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 28625886 - 28625797
Alignment:
Q  82 atgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||||||||||  ||||| ||||||||| ||||||| ||||||| |||||||| || || || ||||| ||||| | ||||||    
T  28625886 atgaatgttgtgtttacggagattgattttgccattcaaaaagatctagcggcgcagcttattacccgtttgccttctatttaagtgtaa 28625797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 4166014 - 4166114
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||||||  |||  || ||||||  |||||| ||||| |||| ||  || ||| | |||||||||||||||||||||||||||||||    
T  4166014 gttgaccttctacatagagtttaaaaggtcatgcatgacaatgtcatgtcacctaggtcaataaatatagtgtttacgaggattggttttgccatccaaa 4166113  T
Q  122 a 122  Q
    |    
T  4166114 a 4166114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 19280091 - 19280049
Alignment:
Q  403 cttaaaaattatgtattcaacttattgaaagattaaaaagcaa 445  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  19280091 cttaaaaattatgtattcaatatattgaaagattaaaaagcaa 19280049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 28543398 - 28543260
Alignment:
Q  36 tagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacg 135  Q
    |||||||||||  || ||| | | ||||||||||| ||||| || ||| ||| || |||||| |||||||||||||||||||  ||||| ||||||| ||    
T  28543398 tagagtccaaaaggtcatgtaaaacaatgttatgtttcctaggtccataaatattatgtttaagaggattggttttgccatctgaaaagatctagcggcg 28543299  T
Q  136 cagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    || ||  ||| | |  ||||| ||||||||| |||||||    
T  28543298 caactaattgtccgcttgccttctattcatgcgtaagta 28543260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 32531042 - 32531108
Alignment:
Q  124 ggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    |||||||||  ||||||||||| |||  || ||| |||||||||||||||| |||||||||||||||    
T  32531042 ggtctagcggtgcagcttgttgtctgcgtgtctcatattcatgtgtaagtaatattgatagtaaata 32531108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 5168166 - 5168218
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcct 75  Q
    ||||||||| ||||| ||||||| |||| || |||||||||||||||||||||    
T  5168166 ttgaccttcaacgtatagtccaatgagtcatacatagcaatgttatgtctcct 5168218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 45769 - 45819
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtct 72  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||||||    
T  45769 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 30456826 - 30456784
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgcc 501  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||    
T  30456826 aaatttatcaattatttccatttttgtatccttaacaagtgcc 30456784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 3714931 - 3714838
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccat 116  Q
    |||| ||||||| ||||||  ||||| | ||||| | |||||| ||||||| ||| | |||||||||||||||| | ||||||| |||| ||||    
T  3714931 ttgatcttctacatagagtttaaagaatcatgcacaacaatgtcatgtctcataaatccatgaatgttgtgtttgcaaggattgattttaccat 3714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 6420374 - 6420321
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt 400  Q
    ||||| ||||||||||| | |||||||||||||| || |||||||||| |||||    
T  6420374 aaatgctaacaagtgcccttagggcacttgataagaaacttaaagtagtaactt 6420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 384
Target Start/End: Complemental strand, 24396918 - 24396881
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaag 384  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  24396918 aaatgttaacaagtgcccttagggcacttgataaaaag 24396881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 500
Target Start/End: Complemental strand, 29694645 - 29694604
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgc 500  Q
    ||||||||||||| ||| |||||||||||||||||| |||||    
T  29694645 aaatttaacaattgtttacttttttgaatccttaacgagtgc 29694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 6e-64; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 3330019 - 3329843
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||    
T  3330019 cagaggcagttgaccttctacatagagtccaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgctgtgtttacgatgattggttttgc 3329920  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||||||||||| |||||||||||||| |  ||||||||||||| ||||||||| |||||||||||||||    
T  3329919 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcacgtgtaagtaatattgatagtaaata 3329843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 53619609 - 53619433
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||| || || ||||||||||||||||||||| |||||||||||    
T  53619609 cagaggcagttgaccttctacatagagtctaaagggttatgcataacaatgttatgtctcttaggtccatgaatgttgtgtttacgagaattggttttgc 53619510  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||||||||||| |||||||||||||||   | ||||||||||||||||||||| |||||||||||||||    
T  53619509 catccaaaaaggtctagcggcgcagcttgttgcctacttacctcctattcatgtgtaagtaatattgatagtaaata 53619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 50001010 - 50001186
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||  | ||| |||||||||||||||| ||||| ||||||    
T  50001010 cagaggcagttgaccttctacatatagtccaaagggttatgcatagcaatgttatgtctcctagatccataaatgttgtgtttacgaagattgattttgc 50001109  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||| ||||||| |||||||||||||| |  ||||||||||||||||||||||| |||| ||||||||||    
T  50001110 catccaaaaagatctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaatattaatagtaaata 50001186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 39001425 - 39001260
Alignment:
Q  9 aggagcagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggt 108  Q
    |||| ||||| ||||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||    
T  39001425 aggatcagaggcagttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattggt 39001326  T
Q  109 tttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    |||| ||||||||||||||||||| ||||| |||||||| |  |||||||||||||||||||||||    
T  39001325 tttgtcatccaaaaaggtctagcggcgcagtttgttgcccgcttgcctcctattcatgtgtaagta 39001260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 23255730 - 23255560
Alignment:
Q  20 cagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatcca 119  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  23255730 cagttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgtttacgaggattgattttgccatcca 23255631  T
Q  120 aaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
     ||| |||||||| |||||||||||| | |  | |||||||||||| ||| |||| |||||||||||||||    
T  23255630 gaaaagtctagcggcgcagcttgttgtccgcttacctcctattcatatgtgagtaatattgatagtaaata 23255560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 4419278 - 4419122
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  4419278 gttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgatgattggttttgccatccaaa 4419179  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtatt 179  Q
    ||  ||||||| |||||||||||||| |  ||||||||||||||||| ||||| ||||    
T  4419178 aa-atctagcggcgcagcttgttgcccgcttgcctcctattcatgtgcaagtaatatt 4419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 55933552 - 55933719
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||||||||| ||||| |||| |||| |||||||||||| || | |||||||||||||||||| ||||| ||||||||||||||    
T  55933552 gttgaccttctacatagagtccaaagggttatacataacaatattatgtctcctaggtccgtgaatgttgtgtttacgatgattgattttgccatccaaa 55933651  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaat 189  Q
    || |||||||||||||| |||||| | |  ||||||||||||||||| ||||| |||||||| |||||    
T  55933652 aaagtctagcgacgcagtttgttgtccgcttgcctcctattcatgtgcaagtaatattgatattaaat 55933719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 48657012 - 48657170
Alignment:
Q  27 ccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggt 126  Q
    |||||||| |||||||||||   |||||||||||||||||||||||| || ||  ||||||||||||||||||| ||||| ||||||| ||||||||| |    
T  48657012 ccttctacatagagtccaaatgattatgcatagcaatgttatgtctcataggtctatgaatgttgtgtttacgatgattgattttgccgtccaaaaagat 48657111  T
Q  127 ctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaa 187  Q
    |||| |  |  ||||||||||||  || ||||||||||||| |||||| ||||||||||||    
T  48657112 ctagtg--gtggcttgttgcctgcttggctcctattcatgtataagtaatattgatagtaa 48657170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 34107788 - 34107913
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| |||| ||| ||||||| |||||||||||||||||  | ||||||||||||||| |||||||||||||||| ||||||||    
T  34107788 gttgaccttctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgtgttcacgaggattggttttgtcatccaaa 34107887  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    || || || || | ||||||||||||    
T  34107888 aaagtttaacggcacagcttgttgcc 34107913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 50464388 - 50464511
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||||||||||  |||| || ||||||| |||||| |||||||| || |  ||||||||||||||||||||||||  ||||||||||||||    
T  50464388 gttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctcccaaatatatgaatgttgtgtttacgaggatttattttgccatccaaa 50464487  T
Q  122 aaggtctagcgacgcagcttgttg 145  Q
    |||  |||||| ||||||||||||    
T  50464488 aagacctagcggcgcagcttgttg 50464511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 30940831 - 30940973
Alignment:
Q  29 ttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtct 128  Q
    |||||| |||||| ||||  || ||||||| |||||| || | ||||| ||  |||||||||||||| | |||||||| |||||||||||||||||||||    
T  30940831 ttctacatagagttcaaaaggtcatgcataacaatgtcatatatcctaggtctatgaatgttgtgttcatgaggattgattttgccatccaaaaaggtct 30940930  T
Q  129 agcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||||||||||| |  ||||| ||||||| ||||||    
T  30940931 agcgacgcagcttgttgcccgcttgccttctattcaagtgtaa 30940973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 31847071 - 31846966
Alignment:
Q  69 gtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtg 168  Q
    |||||||| || |||||||||||||||  |||||||| ||| |||||||||||||||||||||| ||||| |||||||| |  |||||||||||||||||    
T  31847071 gtctcctaggtccatgaatgttgtgttagcgaggattcgttatgccatccaaaaaggtctagcggcgcaggttgttgcccgcttgcctcctattcatgtg 31846972  T
Q  169 taagta 174  Q
    ||||||    
T  31846971 taagta 31846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 50442609 - 50442696
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||    
T  50442609 caatgttatgtctcctaggttcatggatgttgtgtttaagaggattggttttgccatccaaaaagggttagtggcgcagcttgttgcc 50442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 53170528 - 53170418
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctccta-agttcatgaatgttgtgtttacgaggattggttttgccatccaa 120  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||| || |||||||||||||||| |||||||||| |||||| ||| ||    
T  53170528 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctataggtcatgaatgttgtgttcacgaggattgattttgctatctaa 53170429  T
Q  121 aaaggtctagc 131  Q
    |||||||||||    
T  53170428 aaaggtctagc 53170418  T

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Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 26521503 - 26521352
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| || ||| ||||| || |||| ||||||||| |||| ||||| |  ||||| |||||||||||||||||||||||||| ||||||||    
T  26521503 gttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatga-tgttgtgtttacgaggattggttttgtcatccaaa 26521405  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||||| ||||| | |||||| ||| | |  ||||| |||| ||||||||||||    
T  26521404 aaggtttagcggcacagctttttgtccgcttgccttctatccatgtgtaagta 26521352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 600784 - 600933
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||| ||| | |||| |||||||||| || ||| |||| ||||||||||| |||| |||||||||||||||    
T  600784 gttgaccttctacatagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtgtttacgatgattagttttgccatccaaa 600883  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    || || |||||||| ||||||||| | |  ||||| ||||||| ||||||    
T  600884 aatgtatagcgacgtagcttgttgtccgcttgccttctattcaagtgtaa 600933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 12053415 - 12053330
Alignment:
Q  89 ttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||| |||  ||||| |||||||||||||||||    
T  12053415 ttgtgtttacgagaattggttttgccatcgaaaaaggccgagcgacgcagcttgttgtctgcttgccttctattcatgtgtaagta 12053330  T

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Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 16955473 - 16955352
Alignment:
Q  24 tgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||| |||||| ||||  || |||||||||||||| |||||||||| |  |||||||||||||||||||||||||| ||| |||||| |||||    
T  16955473 tgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgtttacgaggattgatttggccatcaaaaaa 16955374  T
Q  124 ggtctagcgacgcagcttgttg 145  Q
    | ||   |||||||| ||||||    
T  16955373 gatccgacgacgcagtttgttg 16955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 373 - 499
Target Start/End: Complemental strand, 37175854 - 37175727
Alignment:
Q  373 cttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaatt 471  Q
    |||||||| ||||||||||||||||||| | |||  |||||||| ||||||||||||||||||||||||||||         |||| |||||| |||| |    
T  37175854 cttgataagaagcttaaagtagcaactttatcttggaaattatgcattcaacttattgaaagattaaaaagcacatttttctatataaaatttcacaact 37175755  T
Q  472 atttccttttttgaatccttaacaagtg 499  Q
    |||| |||||||||||||||||| ||||    
T  37175754 attttcttttttgaatccttaactagtg 37175727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 46440983 - 46441149
Alignment:
Q  24 tgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||| |||||||||||| ||| |||||||||||| |||||||| || |||||||||  || | ||||||| ||||| ||||| |||| |||||    
T  46440983 tgaccttctacatagagtccaaagggttgtgcatagcaatgctatgtctcataggttcatgaaaattatatttacgatgattgattttgtcatctaaaaa 46441082  T
Q  124 ggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    | | ||||  || | ||||| ||| |  || ||| ||||||| |||||||| || ||||||||||||    
T  46441083 gatttagcatcgtaacttgtcgcccgcttgtctcttattcatttgtaagtaatactgatagtaaata 46441149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 50463030 - 50463155
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||||| ||||||||||||||||||||  |||| |  ||||||| |||||  |||||||| ||||  ||||   ||||||||||||||||| |||||||    
T  50463030 cagagactgttgaccttctacgtagagtttaaagggccatgcataacaatgccatgtctcccaagtatatga---ttgtgtttacgaggatttgttttgc 50463126  T
Q  114 catccaaaaaggtctagcgacgcagcttg 142  Q
    |||||||||||  |||||| |||||||||    
T  50463127 catccaaaaagacctagcggcgcagcttg 50463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 56462198 - 56462291
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgcca 115  Q
    ||||||||||||| |||||| |||||  | ||||||  |||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  56462198 gttgaccttctacatagagttcaaaggatcatgcatgacaatgtcatgtctcctaagtccataaatgttgtgtttacgagaattggttttgcca 56462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 446
Target Start/End: Original strand, 39292298 - 39292371
Alignment:
Q  374 ttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaac 446  Q
    |||||||||| |||||||||||||||| | |||  |||||||| ||||||||||||||||||||||||||||||    
T  39292298 ttgataaaaaacttaaagtagcaactttatcttggaaattatgcattcaacttattgaaagattaaaaagcaac 39292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 38535669 - 38535760
Alignment:
Q  30 tctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    ||||| |||||| |||||||| |||||||||||||| ||||||  || || |||| |||||||||||||||||||| |||||| |||||||||    
T  38535669 tctacatagagttcaaagagtcatgcatagcaatgtcatgtcttataggtccatggatgttgtgtttacgaggattagttttg-catccaaaa 38535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 40392723 - 40392795
Alignment:
Q  99 gaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |  ||||| ||||||| ||||||    
T  40392723 gaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaa 40392795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 6865916 - 6866062
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||| ||| |||||| ||||| || |||||||||||||| ||||||||| || ||||||||||| || ||||   ||||| |||| || | ||||||||    
T  6865916 accttttacatagagttcaaagggtaatgcatagcaatgtcatgtctcct-agatcatgaatgttctg-ttacatagattgattttacctttcaaaaagg 6866013  T
Q  126 tctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||||||||| || ||||||| || | |  || |||||||||||||||||    
T  6866014 tctagcgacacaacttgttgtctttttatcttctattcatgtgtaagta 6866062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 403 - 501
Target Start/End: Original strand, 44369026 - 44369126
Alignment:
Q  403 cttaaaaattatgtattcaacttattgaaagattaaaaag--caacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtgc 500  Q
    |||||||||| ||||||||| ||||||||||||||||||   |||        |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  44369026 cttaaaaattgtgtattcaatttattgaaagattaaaaaaaacaatattttttatataaaatttaacaattattttctttttttaatccttaacaagtgc 44369125  T
Q  501 c 501  Q
    |    
T  44369126 c 44369126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 41372253 - 41372328
Alignment:
Q  115 atccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||| |||||||||||  |||| ||||||| |||  ||||||||||||||||||||||| ||||||||| |||||    
T  41372253 atccacaaaggtctagcagcgcaacttgttgtctgcttgcctcctattcatgtgtaagtaatattgatagaaaata 41372328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 7536663 - 7536772
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||   |  ||||||||||| ||||||||| ||  | |||||||||| ||||||| | |||||||||||  |||||||    
T  7536663 gttgaccttctacatagagttcaaatgatcgtgcatagcaattttatgtctcgtagatccatgaatgttatgtttacaatgattggttttgtgatccaaa 7536762  T
Q  122 aaggtctagc 131  Q
    ||| ||||||    
T  7536763 aagatctagc 7536772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 18981652 - 18981735
Alignment:
Q  43 caaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtct 128  Q
    ||||| || |||||||| ||||| ||||||| || || |||||||||||||||||||| |||||| |||||||||||||| |||||    
T  18981652 caaagggtcatgcatagtaatgtcatgtctc-taggtccatgaatgttgtgtttacgatgattgg-tttgccatccaaaatggtct 18981735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 23233211 - 23233331
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||||||||||||| ||| | || |||||||  ||||| |||| |||||  |||||||||||||| |||| |||||||| ||| || |||||||||||    
T  23233211 accttctacgtagagttcaagg-gtcatgcataataatgtcatgtttcctagattcatgaatgttgtctttatgaggattgatttggctatccaaaaagg 23233309  T
Q  126 tctagcgacgcagcttgttgcc 147  Q
      ||||  | ||||||||||||    
T  23233310 cttagcagcacagcttgttgcc 23233331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 2852391 - 2852323
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctg 149  Q
    ||||||||||||||| || ||||||||||||  ||| ||||||||  ||||| ||||||||||||||||    
T  2852391 catgaatgttgtgttcacaaggattggttttttcattcaaaaaggcttagcggcgcagcttgttgcctg 2852323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 8738190 - 8738098
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgtt 144  Q
    |||||||  ||||| ||||||| || ||||||||||||||||| ||| | ||||| ||||| |||||||||| || ||||| ||||| |||||    
T  8738190 atgcataaaaatgtcatgtctcttaggttcatgaatgttgtgtatacaaagattgattttgtcatccaaaaaagtttagcggcgcagtttgtt 8738098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 12917984 - 12917896
Alignment:
Q  102 gattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||| ||||| |||||||||||||||| || | || ||| ||| |||  |||||| |||||||| ||||||| |||||||||||||||    
T  12917984 gattgattttgtcatccaaaaaggtctaacggcacaacttattgtctgcttgcctcttattcatgagtaagtaatattgatagtaaata 12917896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 50620637 - 50620734
Alignment:
Q  408 aaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||| || |||||||||||||||| | |||||||||||       |||| |||||| | |||||||||||||||||| |||||||| | ||||||||    
T  50620637 aaattgtgcattcaacttattgaaatagtaaaaagcaactttttctatataaaatttcataattatttccttttttgattccttaaccattgccctaa 50620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 23605059 - 23604956
Alignment:
Q  68 tgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgt 167  Q
    |||||||||  | ||||||| |||||||   |||||||| ||||| ||||||||||||||||||| |||| ||||||| | |  || || ||||||||||    
T  23605059 tgtctcctagatccatgaatattgtgttgttgaggattgattttgtcatccaaaaaggtctagcggcgcaacttgttgtccggttgtcttctattcatgt 23604960  T
Q  168 gtaa 171  Q
    ||||    
T  23604959 gtaa 23604956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 47585167 - 47585242
Alignment:
Q  89 ttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattca 164  Q
    |||||||||||| ||||||||||| |||| |||||||| ||||| || || |||||| |||| ||||| |||||||    
T  47585167 ttgtgtttacgaagattggttttgtcatctaaaaaggtttagcggcgtagtttgttgtctgtttgccttctattca 47585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 54190943 - 54191050
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||| || |||||| ||||| |  ||||||| |||||| ||| ||| ||||| ||| ||| |||| ||||| | |||||||||||| |||||||    
T  54190943 gttgaccttccacatagagttcaaagggccatgcataacaatgtcatgactcttaagtccataaatattgtatttacaaagattggttttgctatccaaa 54191042  T
Q  122 aaggtcta 129  Q
    ||| ||||    
T  54191043 aagttcta 54191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 505
Target Start/End: Original strand, 4068383 - 4068428
Alignment:
Q  460 aatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||    
T  4068383 aatttaacaattgtttctttttttgaatccttaactagtgccctaa 4068428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 34213634 - 34213534
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||  |||||| ||||| || |||| || ||||||  | |||||||  | |||||||||||||||||| ||||| ||||||||||||| ||    
T  34213634 gttgaccttctagatagagttcaaagggtcatgcctaacaatgtg-tctctcctagttccatgaatgttgtgtttacaaggatcggttttgccatccgaa 34213536  T
Q  122 aa 123  Q
    ||    
T  34213535 aa 34213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 24943681 - 24943598
Alignment:
Q  365 taagggcacttgataaaaagcttaaagtagcaactt--accttaaaaattatgtattcaacttattgaaagattaaaaagcaac 446  Q
    ||||| |||||||||| ||||||||||||| || ||  | ||| |||||| |||||| || |||||||||||||||||| ||||    
T  24943681 taaggacacttgataagaagcttaaagtagtaaattttatcttgaaaattgtgtatttaatttattgaaagattaaaaaacaac 24943598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 16009347 - 16009242
Alignment:
Q  55 catagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgc 154  Q
    |||||||||||||||||  ||  ||  |||||||| ||||||| || |||||||||||| ||  |||||||| ||||| ||||||||||||||||  |||    
T  16009347 catagcaatgttatgtccgctcggtctatgaatgt-gtgtttaagatgattggttttgcgataaaaaaaggt-tagcggcgcagcttgttgcctgcttgc 16009250  T
Q  155 ctcctatt 162  Q
    || |||||    
T  16009249 cttctatt 16009242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 28739920 - 28739845
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgttta 97  Q
    ||||||||| ||| |||||| ||| | |  ||||||| ||||||||||||||||| || ||| |||||||||||||    
T  28739920 gttgaccttttacatagagttcaacgtgcaatgcataacaatgttatgtctcctaggtccataaatgttgtgttta 28739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 45661647 - 45661604
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||    
T  45661647 catgaatattgtgtttacgaggattggttttactatccaaaaag 45661604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 50351146 - 50351185
Alignment:
Q  86 atgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  50351146 atgttgtgtttaagtggattggttttgccatccaaaaagg 50351185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 9601184 - 9601122
Alignment:
Q  62 atgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||| ||| |||||| |||||| | || ||||||||||||||||| ||||| |||||||||||    
T  9601184 atgtcatgactcctaggttcataagtggtgtgtttacgaggattgattttgtcatccaaaaag 9601122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 1041384 - 1041339
Alignment:
Q  78 gttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  1041384 gttcatgaatgttgtgttttcgatgattgattttaccatccaaaaa 1041339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 28977286 - 28977351
Alignment:
Q  123 aggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaa 188  Q
    |||||||||| |||| ||||||  | || ||||||||||||||| |||| || |||||||||||||    
T  28977286 aggtctagcggcgcaacttgttatcagtttgcctcctattcatgcgtaattaatattgatagtaaa 28977351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 49354191 - 49354265
Alignment:
Q  55 catagcaatgttatgtctcctaagttcatgaat----gttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||||| ||||||||||| | |||||||    ||||||||||||| ||||| ||||| | ||||||||||    
T  49354191 catagcaatgtaatgtctcctaaatccatgaattaatgttgtgtttacgatgattgattttgtcgtccaaaaagg 49354265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 8e-57; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 26772781 - 26772605
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||  |||||| |||||  ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  26772781 cagaggcagttgaccttctatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattttgc 26772682  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||| |||||||| ||||||    
T  26772681 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaatattgataataaata 26772605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 38670974 - 38671140
Alignment:
Q  24 tgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  38670974 tgaccttctacatagagtctaaagagttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtgtacgaggattggttttgccatctaaaaa 38671073  T
Q  124 ggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
     |||||||| |||||||||||| | |  | ||||||||| |||||||| || |||||||||||||||    
T  38671074 agtctagcggcgcagcttgttgtccgcttacctcctatttatgtgtaaataatattgatagtaaata 38671140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 32546810 - 32546661
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| |||| ||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  32546810 gttgaccttctacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgccatccaaa 32546711  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  32546710 aaggtctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 32546661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 39583321 - 39583473
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||| | |||||| ||||| || |||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  39583321 gttgaccttctgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgtttacgaggattgattttgccatccaaa 39583420  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||||||||||| |||| ||||||| |||  ||| | |||||||||||||||||    
T  39583421 aaggtctagcggcgcaacttgttgtctgcttgctttctattcatgtgtaagta 39583473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 26856847 - 26856978
Alignment:
Q  15 agagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgcc 114  Q
    |||||| ||||||||||||| |||||| ||||| || |||||||||||||| |||||||||| ||| |||||||||||| || |||||||||||||| ||    
T  26856847 agagactgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgaggattggttttacc 26856946  T
Q  115 atccaaaaaggtctagcgacgcagcttgttgc 146  Q
    ||||||||||| |||||| |||||||||||||    
T  26856947 atccaaaaaggcctagcggcgcagcttgttgc 26856978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 53785724 - 53785575
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||||||||     
T  53785724 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgtttacgaggattggttttgccatccaac 53785625  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||| |||| || ||||||||||| |  ||||| ||||||| ||||||    
T  53785624 aaggtccagcggcgtagcttgttgcccgcttgccttctattcaagtgtaa 53785575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 37133091 - 37133214
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| | ||  || |||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||| |||||||    
T  37133091 gttgaccttctacatagagttctaaaggtcatgcatagcaatgtcatgtctcctaagttaatgaatgttgtgtttataaggattggttttgcgatccaaa 37133190  T
Q  122 aaggtctagcgacgcagcttgttg 145  Q
    ||||||||||| ||||| ||||||    
T  37133191 aaggtctagcggcgcagtttgttg 37133214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 44198782 - 44198633
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| || |  ||||||||||||||||| |||||||||| || |||||||||||||||| |||  |||| ||||||||||||||    
T  44198782 gttgaccttctacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttgcgataattgattttgccatccaaa 44198683  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||  |||||| |||||||||| | |  ||||| ||||||| ||||||    
T  44198682 aaggttgagcgacacagcttgttgtccgcttgccttctattcaagtgtaa 44198633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 44851 - 44699
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgt---gtttacgaggattggttttgccatcc 118  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||| ||||| || ||||||||||||   ||| || |||||| ||||||||||||    
T  44851 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgttgtgttcacaaggatttgttttgccatcc 44752  T
Q  119 aaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||||||| ||||| |||||||| |  ||||| ||||||| ||||||    
T  44751 aaaaaggtctagcggcgcagtttgttgcccgcttgccttctattcaagtgtaa 44699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 4763888 - 4764033
Alignment:
Q  25 gaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||||||||| |||||| ||||  ||||||||||||||||| |||||||||  || ||||||||||||||||||||||||| |  |||||||||||||||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcctg-gtccatgaatgttgtgtttacgaggattagaattgccatccaaaaag 4763986  T
Q  125 gtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |  | | | |||| ||||||||| |  ||||| ||||||| ||||||    
T  4763987 gcttggtggcgcaacttgttgcccgcttgccttctattcaagtgtaa 4764033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 13582525 - 13582411
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||  ||||| ||||  || ||||||| |||||| |||||||||| |  |||||||||||||||||||| ||||| ||| ||||||||||    
T  13582525 gttgaccttctacagagagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgtttacgaagattgatttagccatccaaa 13582426  T
Q  122 aaggtctagcgacgc 136  Q
    |||| ||||||||||    
T  13582425 aaggcctagcgacgc 13582411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 52741604 - 52741729
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| ||||||||||  | |||  || |||| || |||| |||| |||||||||||||||    
T  52741604 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatttatcttgtattcacgaagatttgttttgccatccaaa 52741703  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    |||||||||||||||| ||| |||||    
T  52741704 aaggtctagcgacgcaacttattgcc 52741729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 3443404 - 3443506
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| || |||| ||| |||||  |||||||||| |  ||||||||||||||||||| |||||||||||||||||| |    
T  3443404 gttgaccttctacatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgtttacgatgattggttttgccatccaca 3443503  T
Q  122 aag 124  Q
    |||    
T  3443504 aag 3443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 25325044 - 25324893
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||   | |||||||||||||| | || |||||| | ||||||| ||||| |||||| ||||| ||||||||||||||    
T  25325044 gttgaccttctacatagagttcaaatgatcatgcatagcaatgtcaagtttcctaaatccatgaatattgtgcttacgatgattgcttttgccatccaaa 25324945  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||   ||| ||||||| ||| ||| |||| ||||| |||||||| ||||||||    
T  25324944 aa-aactaacgacgcaccttattgtctgtttgccttctattcatatgtaagta 25324893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 4473073 - 4472970
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||| || ||| |||||| | |||||||||||| | |||||||||| ||  |||||| ||||||||||||| |||||||||| |||||||||| |    
T  4473073 accttctacataaagttcaaagaatcatgcatagcaatttcatgtctcctaggtctatgaatattgtgtttacgagaattggttttgtcatccaaaaaag 4472974  T
Q  126 tcta 129  Q
    ||||    
T  4472973 tcta 4472970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 38978891 - 38979016
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| || ||| ||||  || ||||||| |||||| ||||||| || ||| || ||||||||||||||||  ||| |||||||||||||||    
T  38978891 gttgaccttctacatatagttcaaaaggtgatgcataacaatgtcatgtctcataggtttatcaatgttgtgtttacgaaaattagttttgccatccaaa 38978990  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||  || | ||||| |||||||||    
T  38978991 aaggcttaacaacgcaacttgttgcc 38979016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 4669788 - 4669880
Alignment:
Q  55 catagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    |||| |||||| |||||||||  || |||||||||||||||||||| ||||| |||||  |||||||||||| | ||| ||||||||||||||    
T  4669788 cataacaatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggtttggcggcgcagcttgttgcc 4669880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5338599 - 5338552
Alignment:
Q  84 gaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagc 131  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5338599 gaatgttgtgtttacgaggattggttttgccatccaaaatggtctagc 5338552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 38146064 - 38145969
Alignment:
Q  29 ttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||||| |||||| ||||| || ||||||| |||||| |||||||||| || |||||| ||||||||||||| ||||| ||||| |||| ||||||    
T  38146064 ttctacttagagttcaaagggtcatgcataacaatgtcatgtctcctaggtccatgaacgttgtgtttacgatgattgattttgtcatctaaaaag 38145969  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 46940903 - 46941014
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcct 159  Q
    |||||| ||| ||| || |||||||||||||||||||||||  |||| |||||  ||||||||||  ||||||  ||| |||||||||||| | ||| ||    
T  46940903 caatgtcatgactcataggttcatgaatgttgtgtttacgaaaattgattttgttatccaaaaagacctagcggtgcaacttgttgcctgtttaccttct 46941002  T
Q  160 attcatgtgtaa 171  Q
    ||||||||||||    
T  46941003 attcatgtgtaa 46941014  T

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Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 52411983 - 52412086
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| || ||||||| |||||| ||||||||||    ||| ||| |||||||||| | ||||| ||||||||||||||    
T  52411983 gttgaccttctacatagagttcaaagggtcatgcataacaatgtcatgtctcctagacccataaatattgtgtttacaatgattgattttgccatccaaa 52412082  T
Q  122 aagg 125  Q
    ||||    
T  52412083 aagg 52412086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 26276571 - 26276505
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||||  | |||||||||||    
T  26276571 catgaatgttgtgtttatgaggattgattttgccatccaaaaagatctagcggtgtagcttgttgcc 26276505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 25094665 - 25094767
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    |||||||||||| || ||| ||||  || |||||||||||||| || |||  ||||| ||||||||||||||| |||| |||| ||||||| ||| ||||    
T  25094665 ttgaccttctacatatagttcaaatggtcatgcatagcaatgtaatatcttttaagtccatgaatgttgtgttcacgaagattagttttgcaatctaaaa 25094764  T
Q  123 agg 125  Q
    |||    
T  25094765 agg 25094767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 32690966 - 32691060
Alignment:
Q  30 tctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||| ||||||  ||||||| ||||| |  ||| |||||||||||||||  |||||||||||||||| |||||||| ||||  |||||||||||    
T  32690966 tctacatagagttaaaagagtcatgcacaataatattatgtctcctaagtctatgaatgttgtgtttaagaggattgattttatcatccaaaaag 32691060  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 21552691 - 21552577
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagca----atgttatgtctcctaagttcatgaatgttgtgtttacgaggattggtt 109  Q
    ||||||| ||||||||||||| |||||| ||||  || |||||||| |    || | || ||||||| || |||||||||||||||||| || |||||||    
T  21552691 cagagactgttgaccttctacatagagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccatgaatgttgtgtttacaagaattggtt 21552592  T
Q  110 ttgccatccaaaaag 124  Q
    ||| |||||||||||    
T  21552591 ttgacatccaaaaag 21552577  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 26393812 - 26393888
Alignment:
Q  56 atagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcg 132  Q
    |||||||| |||||||||||  ||  ||||||||||||||||||||||||| | || |||||||| ||||| |||||    
T  26393812 atagcaatattatgtctccttggtctatgaatgttgtgtttacgaggattgatatttccatccaacaaggtttagcg 26393888  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 50657320 - 50657232
Alignment:
Q  94 tttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgat 182  Q
    ||||||| |||||||||||| || ||||||| |||||||||| || |||||| | |  || ||| |||||||||||||||| |||||||    
T  50657320 tttacgaagattggttttgctattcaaaaagatctagcgacgtagtttgttgtcagcttgtctcatattcatgtgtaagtaatattgat 50657232  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 51234631 - 51234575
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaag 78  Q
    ||||||||||||| |||||| ||||  |||||||||| |||||||||||||||||||    
T  51234631 gttgaccttctacatagagttcaaaaggttatgcataacaatgttatgtctcctaag 51234575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 30076557 - 30076596
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagt 498  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  30076557 aaatttaacaattgtttccttttttgaatccttaacaagt 30076596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 2601785 - 2601695
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||| ||||||||||||||||||| ||||||||    |||| ||||| ||| ||||||||||| | || || || ||||||||||||||    
T  2601785 catgaacgttgtgtttacgaggattgattttgccactgtaaaaagtctaacgatgcagcttgttgtccgtttgtcttctattcatgtgtaa 2601695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 8592141 - 8592004
Alignment:
Q  36 tagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacg 135  Q
    |||||| ||| |||| ||||||| |||||| | | || ||| || ||| ||| ||||||||| | |||||| |||||||||||||||||| | |||| ||    
T  8592141 tagagttcaacgagtcatgcatatcaatgtcacgccttctaggtccatcaatattgtgttta-gcggattgattttgccatccaaaaaggcccagcggcg 8592043  T
Q  136 cagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    ||||||||| ||    |||||  ||||||||||||||||    
T  8592042 cagcttgttacccacttgccttatattcatgtgtaagta 8592004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 499
Target Start/End: Original strand, 36924534 - 36924647
Alignment:
Q  385 cttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttcctttttt 483  Q
    |||||||||||||||| |  || ||||||  || ||||| ||||||||||||||||||||||        | || |||||||||||||||||| ||||||    
T  36924534 cttaaagtagcaactttattttgaaaattgcgtgttcaatttattgaaagattaaaaagcaa-tttttttacataaaatttaacaattatttc-tttttt 36924631  T
Q  484 gaatccttaacaagtg 499  Q
    ||||||||||||||||    
T  36924632 gaatccttaacaagtg 36924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 49017922 - 49017880
Alignment:
Q  82 atgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  49017922 atgaatgttgtgtttatgaggattgattttgccatccaaaaag 49017880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 7900873 - 7900772
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||||||   |||  |||| |||||||||||||||| ||||| || ||| ||| || ||||||| | |||| ||||| |||||||||    
T  7900873 gttgaccttctacatagagtttgaaggattatacatagcaatgttatgtttcctaggtccatcaatattttgtttacaatgattagttttaccatccaaa 7900774  T
Q  122 aa 123  Q
    ||    
T  7900773 aa 7900772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 7257655 - 7257751
Alignment:
Q  29 ttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||| || ||| ||||| | ||| ||||||||| | |||| | ||| || |||||||||||||||||||| |||| |||||| ||| ||||||||    
T  7257655 ttctacatatagttcaaagggctatccatagcaatatcatgtattctaggtccatgaatgttgtgtttacgaagattagttttgtcattcaaaaagg 7257751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 25190027 - 25190119
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgcca 115  Q
    ||||||||||||  ||||| |||||||| ||| |||| |||||  |||| |||||||  ||||||||||| |||| |||||||| ||| ||||    
T  25190027 ttgaccttctacaaagagttcaaagagtcatgaatagaaatgtagtgtcgcctaagtatatgaatgttgtatttaagaggattgatttcgcca 25190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 37992347 - 37992240
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||  ||||| ||| | || ||||| || ||||| ||| ||| || || |||||||||||||||| ||| ||||||||||  ||||||||    
T  37992347 gttgaccttctacaaagagttcaagg-gtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttttcgaagattggttttatcatccaaa 37992249  T
Q  122 aaggtctag 130  Q
    ||| |||||    
T  37992248 aagatctag 37992240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 464977 - 465075
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||||||| || ||| || | ||| ||||||| |||| |||||| || ||  |||||||||||||||||||| |  |||| ||||||||| |||||||    
T  464977 accttctacatatagttcataaagtcatgcataacaatattatgtttcatagattcatgaatgttgtgtttacaaatattgattttgccattcaaaaag 465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 505
Target Start/End: Original strand, 50173437 - 50173483
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||| ||||| |||||||||||||||||||||| |||| |||||    
T  50173437 aaatttagcaattgtttccttttttgaatccttaactagtgtcctaa 50173483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 505
Target Start/End: Original strand, 54404313 - 54404359
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||||||||| ||| |||||||||||||||||| |||| |||||    
T  54404313 aaatttaacaattgtttacttttttgaatccttaactagtgtcctaa 54404359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 5e-52; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 35310459 - 35310295
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||| |||||||||||| ||| |||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||    
T  35310459 accttctacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaaagagg 35310360  T
Q  126 tctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    | || ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||| ||||    
T  35310359 tttaacgacgcagcttgttgcccgcttgcctcctattcatgtgtaagtaatattgatagttaata 35310295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 430625 - 430451
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| || |||    
T  430625 cagaggcagttgaccttctacatagattccaaagggttatgcatagtaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattatgc 430526  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaa 188  Q
    |||||||||||||||| ||  ||||||||| | |||  ||||||||||||||||| ||||| |||||||||||||    
T  430525 catccaaaaaggtctatcggtgcagcttgtngtctgcttgcctcctattcatgtgcaagtaatattgatagtaaa 430451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 25663124 - 25663290
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| || ||||||||||| ||||||||||||||| |||| ||||||||    
T  25663124 gttgatcttctacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttacgaggattggctttgtcatccaaa 25663223  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaa 188  Q
    |||||||| ||||||||||||||||  || |||||||| || ||||||||||| |||||||||||||    
T  25663224 aaggtctaacgacgcagcttgttgctcgtttgcctcctttttatgtgtaagtaatattgatagtaaa 25663290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 33692139 - 33692305
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||||| ||||||||||||| ||| |||||||| || ||||||| |||||||||||||| || ||||||||||||| |||||||||   |||||||| |    
T  33692139 cagagactgttgaccttctacatagtgtccaaagggt-atgcataacaatgttatgtctcataggttcatgaatgttctgtttacgat--ttggtttttc 33692235  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgata 183  Q
    ||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  33692236 catccaaaaagatctagcggcgcagcttgttgcctgcttgcctcctattcatgtgtaagtaatattgata 33692305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 13166994 - 13167167
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || ||     
T  13166994 cagagactgttgaccttctacatagagtccaaagggttatgcatagcaatggtatgtctcctaggtccatgaatgttgggtttacgatgattgattctgt 13167093  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaa 187  Q
     |||||||||| ||||||| ||||||||||||||    |||||||||||||||||||| || |||||| |||||    
T  13167094 tatccaaaaagatctagcggcgcagcttgttgcccacttgcctcctattcatgtgtaattaatattgaaagtaa 13167167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 27336716 - 27336542
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| |||||   |||  |||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  27336716 cagaggcagttgaccttctacatagaga--aaatggttatgtatagcaatgttatgtctcctaagtccatgaatgttgtttttacaaggattgattttgc 27336619  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    |||| ||||||||||||||  |||| || ||| | |  || |||||||||||||||||||| |||||||||||||||    
T  27336618 catcaaaaaaggtctagcggtgcagtttattgtccgcttgtctcctattcatgtgtaagtaatattgatagtaaata 27336542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 2566194 - 2566312
Alignment:
Q  29 ttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtct 128  Q
    |||||| |||||| ||||  || |||||||||||||| ||||||||||  | ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgtttacgaggattgattttgccatccaaaaaggtct 2566293  T
Q  129 agcgacgcagcttgttgcc 147  Q
    |||| |||| |||||||||    
T  2566294 agcggcgcaacttgttgcc 2566312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 2917524 - 2917619
Alignment:
Q  94 tttacgaggattggtttt-gccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaa 188  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  2917524 tttacgaggattggtttttgccatccaaaaaggtctagcggcgcagtttgttgcctgcttgcctcctattcatgtgtaggtaatattgatagtaaa 2917619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 42921712 - 42921591
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||| |||||||| |||||| || |  || ||||||| |||||| ||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||||    
T  42921712 gttggccttctacatagagttcagaaggtcatgcataacaatgtcatgtctcctaagtccat-aatattgtgtttacaaggattggttttgccatccaaa 42921614  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    ||| ||||||| |||||||||||    
T  42921613 aagatctagcggcgcagcttgtt 42921591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 22188747 - 22188855
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||| |||| | ||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||    
T  22188747 gttgaccttctacatagagttcaaaaggtcatgcataacaatatcatgtctcctagattcatgaatgttgtgtttacgagaattggttttgtcatccaaa 22188846  T
Q  122 aaggtctag 130  Q
    || ||||||    
T  22188847 aaagtctag 22188855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 32269919 - 32269990
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||    
T  32269919 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttcgccatccaaaaa 32269990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 344 - 494
Target Start/End: Original strand, 2523757 - 2523908
Alignment:
Q  344 ggaaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaac-ttaccttaaaaattatgtattcaacttattgaaagattaaaaag 442  Q
    |||||||| |||||||||||  |||||| |||||||| || ||||||| || ||| ||| |||| |||||||| |||||||||||||||  | |||||||    
T  2523757 ggaaaatgctaacaagtgcctcaagggcgcttgataagaaacttaaagcagtaactttatcttagaaattatgcattcaacttattgaattagtaaaaag 2523856  T
Q  443 caacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaac 494  Q
    ||||       | ||||||||| |||||||||||||||||||| || |||||    
T  2523857 caactttttatacatgaaatttcacaattatttccttttttgattctttaac 2523908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 26212679 - 26212790
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||| |||||| ||||  || ||| || ||||| ||||||||||||||| |||||||||||| || | |||||||||||||||| ||| |||||     
T  26212679 accttctacatagagttcaaaatgtcatgtatggcaatattatgtctcctaagtccatgaatgttgttttcatgaggattggttttgccttccgaaaaga 26212778  T
Q  126 tctagcgacgca 137  Q
    ||||| ||||||    
T  26212779 tctagtgacgca 26212790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 23023580 - 23023460
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtc 151  Q
    ||||||| |||||| |||||||||| ||  ||||||||||||||||||| ||||| ||||| |||||||||||| |||| | |||| ||| ||| | ||     
T  23023580 atgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaaaggcctaggggcgcatcttattgtccgtt 23023481  T
Q  152 tgcctcctattcatgtgtaag 172  Q
    |||||  |||| |||||||||    
T  23023480 tgccttttatttatgtgtaag 23023460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 15292147 - 15292218
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    |||||||||||||| |  ||||||| || ||||||||||||||||| |||||||| ||||||||||||||||    
T  15292147 atgcatagcaatgtcacatctcctaggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaa 15292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 37873730 - 37873840
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| || ||||| | |||||| ||| || ||| ||  |||||||||||||||| |||||||| |||||| ||| |||    
T  37873730 gttgaccttctacatagagttcaaagggtcatgcagaacaatgtcatgacttctaggtctatgaatgttgtgtttaagaggattgattttgctatcaaaa 37873829  T
Q  122 aaggtctagcg 132  Q
    |||| ||||||    
T  37873830 aaggcctagcg 37873840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 11005825 - 11005768
Alignment:
Q  90 tgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  11005825 tgtgtttactaggattggttttgccatccaaaaaggcttagcggcgcagcttgttgcc 11005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 504
Target Start/End: Complemental strand, 34903462 - 34903324
Alignment:
Q  367 agggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaattta 465  Q
    |||||||||||||| || |||||||||| ||||| | ||| |||||| || |||||||||||||||| | ||||||||||        | |||||||||     
T  34903462 agggcacttgataagaaacttaaagtagtaactttatcttgaaaattgtgcattcaacttattgaaatagtaaaaagcaattttttctacatgaaatttc 34903363  T
Q  466 acaattatttccttttttgaatccttaacaagtgcccta 504  Q
    | |||| ||||||||||||| |||||||| | |||||||    
T  34903362 agaattgtttccttttttgattccttaaccattgcccta 34903324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 8100567 - 8100446
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||||||||||  ||||| | ||||||| |||||| |||||| || || || | |||||||| ||| ||| ||||| ||||||||||||||    
T  8100567 gttgaccttctacgtagagtttaaagattcatgcatatcaatgtcatgtcttct-aggtcgtaaatgttgt-tttgcgatgattgattttgccatccaaa 8100470  T
Q  122 aaggtctagcgacgcagcttgttg 145  Q
    || | |||| | ||||||||||||    
T  8100469 aaagcctagtggcgcagcttgttg 8100446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 15506717 - 15506831
Alignment:
Q  32 tacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagc 131  Q
    ||||||||||  |||  |||||| |||||||||| ||||||||||     | ||||||||||||||||||||||| |||| ||||| ||||||| ||| |    
T  15506717 tacgtagagtttaaaaggttatgtatagcaatgtcatgtctcctagacctacgaatgttgtgtttacgaggattgattttaccatcaaaaaaggcctaac 15506816  T
Q  132 gacgcagcttgttgc 146  Q
    | |||| ||||||||    
T  15506817 ggcgcaacttgttgc 15506831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 503
Target Start/End: Original strand, 9765021 - 9765061
Alignment:
Q  463 ttaacaattatttccttttttgaatccttaacaagtgccct 503  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  9765021 ttaacaattatttcctcttttgaatccttaacaagtgccct 9765061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 38875651 - 38875552
Alignment:
Q  24 tgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    |||||||||||||||||| ||||  || ||||||| ||||||  ||||||||| ||  ||| ||||||||||||||| ||||||  |||| |||||||||    
T  38875651 tgaccttctacgtagagttcaaaaggtcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgtttacgatgattgg--ttgcgatccaaaaa 38875555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 12033383 - 12033346
Alignment:
Q  85 aatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    |||||||||||||||| |||||||||||||||||||||    
T  12033383 aatgttgtgtttacgatgattggttttgccatccaaaa 12033346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 19260318 - 19260217
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    |||||||||||| |||||| ||||| || || |||| |||||| ||||||  ||  |||||||||||| ||||||||| |||| ||||| |  |||||||    
T  19260318 ttgaccttctacttagagttcaaagggtcatacataacaatgtaatgtcttatatattcatgaatgttatgtttacgatgatttgtttttcggtccaaaa 19260219  T
Q  123 ag 124  Q
    ||    
T  19260218 ag 19260217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 23092763 - 23092694
Alignment:
Q  93 gtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctatt 162  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||| |||||| |||  ||||| |||||    
T  23092763 gtttacgaggattgattttgtcatccaacaaggtctagcaacgcagtttgttgtctgcttgccttctatt 23092694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 35455921 - 35455840
Alignment:
Q  90 tgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||| |||||| |||||||||||| |||||||| |||||||  || |||||||||| ||| |  || ||||||||||||||    
T  35455921 tgtgtctacgagaattggttttgccgtccaaaaatgtctagcagcggagcttgttgcatgtttatcttctattcatgtgtaa 35455840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 474 - 506
Target Start/End: Complemental strand, 8313091 - 8313059
Alignment:
Q  474 ttccttttttgaatccttaacaagtgccctaaa 506  Q
    |||||||||||||||||||||||||||||||||    
T  8313091 ttccttttttgaatccttaacaagtgccctaaa 8313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 347 - 499
Target Start/End: Complemental strand, 41174449 - 41174296
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagca-acttaccttaaaaattatgtattcaacttattgaaagattaaaaagcaa 445  Q
    ||||||||||||||||  |||| ||||||||||| ||||||||||| | |   ||| |||  || || || ||| |||  ||||||| ||||||||| ||    
T  41174449 aaatgttaacaagtgctctaagagcacttgataagaagcttaaagtggaagttttatcttggaagttgtgcatttaacacattgaaatattaaaaagtaa 41174350  T
Q  446 cnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtg 499  Q
    |       | || ||||||||||||||||||  |||||||||||||||||||||    
T  41174349 ctttgtcaacataaaatttaacaattatttctctttttgaatccttaacaagtg 41174296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 8111807 - 8111772
Alignment:
Q  197 attccactataataataacaatataagttaaatctt 232  Q
    |||| |||||||||||||||||||||||||||||||    
T  8111807 attctactataataataacaatataagttaaatctt 8111772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 14423635 - 14423592
Alignment:
Q  89 ttgtgtttacgaggattggttttgccatccaaaaaggtctagcg 132  Q
    ||||||| || ||||||||||||||||||||||||| |||||||    
T  14423635 ttgtgttcacaaggattggttttgccatccaaaaagatctagcg 14423592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 22819751 - 22819830
Alignment:
Q  43 caaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    ||||||||  ||||||||||||||||||||  ||| |  |||||||||||||||| || ||||| ||||| ||| |||||    
T  22819751 caaagagtcgtgcatagcaatgttatgtctgttaaatctatgaatgttgtgtttatgaagattgattttgtcattcaaaa 22819830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 18650184 - 18650238
Alignment:
Q  346 aaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt 400  Q
    |||||||||||||||||| ||| | |||||||||| ||||||||| ||| |||||    
T  18650184 aaaatgttaacaagtgccttaaagacacttgataagaagcttaaaatagtaactt 18650238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 41383547 - 41383509
Alignment:
Q  404 ttaaaaattatgtattcaacttattgaaagattaaaaag 442  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  41383547 ttaaaaattgtgtattcaacttattgaaatattaaaaag 41383509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 497
Target Start/End: Original strand, 38328718 - 38328747
Alignment:
Q  468 aattatttccttttttgaatccttaacaag 497  Q
    ||||||||||||||||||||||||||||||    
T  38328718 aattatttccttttttgaatccttaacaag 38328747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 7e-48; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 39434690 - 39434516
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| || |||| ||||||| |||||||||||| |||||||||| |||||| ||||||| ||  | |||||||||||||||||||||||||| ||||||    
T  39434690 cagaggcatttgatcttctacatagagtccaaagggttatgcatatcaatgtaatgtctcttagatccatgaatgttgtgtttacgaggattgattttgc 39434591  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||||||||||| |||||||||||||  |   |||||||||||||||||||||| |||||||||||||||    
T  39434590 catccaaaaaggtctagcggcgcagcttgttgctag--cgcctcctattcatgtgtaagtaatattgatagtaaata 39434516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 38815309 - 38815159
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||| || |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  38815309 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttttccatccaaa 38815210  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaag 172  Q
    ||||  ||||| |||||||||||||| |  ||||| |||||||||||||||    
T  38815209 aaggcttagcggcgcagcttgttgcccgcttgccttctattcatgtgtaag 38815159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 3187980 - 3187861
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  3187980 accttctacatagagtc-aaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaaaaagg 3187882  T
Q  126 tctagcgacgcagcttgttgc 146  Q
    |||| ||  ||||||| ||||    
T  3187881 tctaacggtgcagcttattgc 3187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 42659228 - 42659074
Alignment:
Q  36 tagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacg 135  Q
    ||||||| |||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||       
T  42659228 tagagtctaaagggttatgcatagcaatattatgtcttctaggttcatgaatgttgtgtttacgaggattaattttgtcatccaaaaaggtctaacggta 42659129  T
Q  136 cagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
     | ||||||| | |  |||||||||||| |||||||||| |||||||||||||||    
T  42659128 taacttgttgtccgcttgcctcctattcttgtgtaagtaatattgatagtaaata 42659074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 18804627 - 18804479
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||| | ||||  || ||||||| |||||| ||| |||||| ||||| || |||| ||||||||||||||||||||||||||||||    
T  18804627 gttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca-gagtgttttgtttacgaggattggttttgccatccaaa 18804529  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||| ||||||||||||||||  ||||| ||||||| ||||||    
T  18804528 aaggtctagcggcgcagcttgttgcctgcttgccttctattcaagtgtaa 18804479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 22589458 - 22589553
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    |||||||||||||| ||||||| || ||  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22589458 atgcatagcaatgtcatgtctcataggtctatgaatgttgtgttcacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcc 22589553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 37514236 - 37514111
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||| |||||||| ||||| || || |||||||||||| || |||||||||| | |||||| |||||    
T  37514236 gttgaccttctacatagagttcaaaaggtcatgcatatcaatgttacgtctcttaggtccatgaatgttgtattcacgaggattgatcttgccacccaaa 37514137  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    |||||||| || ||||||||||||||    
T  37514136 aaggtctaacggcgcagcttgttgcc 37514111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 4699885 - 4699761
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||  || ||| ||||| || ||| |||||||| ||||||| |||| || |||||||||||||||||| |||||| |||||||||||||||    
T  4699885 gttgaccttctatataaagttcaaag-gtcatgaatagcaatattatgtcacctaggtccatgaatgttgtgtttacaaggattagttttgccatccaaa 4699787  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||  ||| | ||||||||||||||    
T  4699786 aaggcttagtggcgcagcttgttgcc 4699761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 24320296 - 24320203
Alignment:
Q  78 gttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||   |||||||||||||||| || || |||||| |||||||    
T  24320296 gttcatgaatgttgtgtttacgaggattgattttgatatccaaaaaggtctagcagtgcagcttgttgcctgtttgtcttctattcgtgtgtaa 24320203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 3821239 - 3821155
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattg 106  Q
    ||||||||||||| |||||| ||||| || |||||||||||||| |||||||||| |||||| |||||| |||||||||||||||    
T  3821239 gttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgttatgtttacgaggattg 3821155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 6592590 - 6592472
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||| | |||||| ||||  || |||||||  ||||| ||||||| || |||||||||||||||||||||||| |||||||||| |||||| |    
T  6592590 gttgaccttctgcatagagttcaaaaggtcatgcatat-aatgtcatgtctcataggttcatgaatgttgtgtttacgagtattggttttgtcatccaga 6592492  T
Q  122 aaggtctagcgacgcagctt 141  Q
    ||||||||||| | ||||||    
T  6592491 aaggtctagcggcacagctt 6592472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 8882320 - 8882215
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctccta 160  Q
    ||||| |||||||||| || |||||||||||||||||||||||||  |||||||||| ||||| || || || ||||||||||||| ||| || || |||    
T  8882320 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattaattttgccatcaaaaaatgtttaacggcgcagcttgttgcatgtttgtcttcta 8882221  T
Q  161 ttcatg 166  Q
    ||||||    
T  8882220 ttcatg 8882215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 9259384 - 9259485
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| || ||| | |||||||||||||| || | |||||||| |||||||||||| ||||||| ||||| ||||| ||||||||    
T  9259384 gttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgtatttacgaagattgattttgtcatccaaa 9259483  T
Q  122 aa 123  Q
    ||    
T  9259484 aa 9259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 505
Target Start/End: Complemental strand, 15808808 - 15808655
Alignment:
Q  353 taacaagtgccataagggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnn 451  Q
    ||||||||| | ||||  || ||||||||||| |||||||||||| || | |||||||||| |||||| |||||||||||||||||||||| |||         
T  15808808 taacaagtgtcctaagaacatttgataaaaagtttaaagtagcaattttatcttaaaaattgtgtatttaacttattgaaagattaaaaaggaacttttt 15808709  T
Q  452 nnatatgaaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
      | || |||||||||||||  |||||||| |||| | || |||||||||||||    
T  15808708 atacataaaatttaacaattgcttccttttatgaaactttgacaagtgccctaa 15808655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 18596759 - 18596840
Alignment:
Q  90 tgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| | |  ||||| ||||||| ||||||    
T  18596759 tgtgttcacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtcagcttgccttctattcaagtgtaa 18596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 24125043 - 24124947
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatcc 118  Q
    |||| |||||||| || ||| ||||  || |||||||||||||| ||||||| || || |||||||||||||||||| |||||| ||||||||||||    
T  24125043 gttggccttctacataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgtttacaaggattagttttgccatcc 24124947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 44337272 - 44337194
Alignment:
Q  104 ttggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgata 183  Q
    |||||||||||||||||||||||| |||| | |||||||||||  |  ||||||||||||||||||||||| ||||||||    
T  44337272 ttggttttgccatccaaaaaggtccagcggc-cagcttgttgctcgcttgcctcctattcatgtgtaagtaatattgata 44337194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 45312934 - 45312798
Alignment:
Q  343 tggaaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaa 441  Q
    ||||||||||||||||||| |||||| | | |||||||||| ||||||     ||||| | |||  ||||| ||||||||||||||||||||||||||||    
T  45312934 tggaaaatgttaacaagtgtcataagagtatttgataaaaaacttaaa-----aacttcatcttgtaaattgtgtattcaacttattgaaagattaaaaa 45312840  T
Q  442 gcaacnnnnnnnatatgaaatttaacaattatttccttttttgaa 486  Q
    |||||        |||||||||||||||||||||| ||| |||||    
T  45312839 gcaactttcg---tatgaaatttaacaattatttcatttattgaa 45312798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 371 - 501
Target Start/End: Complemental strand, 3036596 - 3036466
Alignment:
Q  371 cacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaa 469  Q
    |||| ||||| ||| ||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||| ||||       | || |||||||| ||    
T  3036596 cactggataataagtttaaagtagcaactttatcttaaaaattgtgtattcaacttattaaaagattaaaaaacaacttttttcacataaaatttaataa 3036497  T
Q  470 ttatttccttttttgaatccttaacaagtgcc 501  Q
    ||| |||| |||||||||| ||||||| ||||    
T  3036496 ttaattcc-tttttgaatctttaacaaatgcc 3036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 24451105 - 24451036
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    |||||||||||||| |||||||||| || ||||||||||||||| |||| |||| ||||||||||||||||    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacgatgatt-gttttgccatccaaaa 24451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 500
Target Start/End: Complemental strand, 45312805 - 45312730
Alignment:
Q  424 ttattgaaagattaaaaagcaacnnnnnnnatatgaaatttaacaattatttccttttttgaatccttaacaagtgc 500  Q
    |||||||||||||||||||||||       | ||||||||||||||||||||| |||||||||||||||||||||||    
T  45312805 ttattgaaagattaaaaagcaacgttttc-acatgaaatttaacaattatttcattttttgaatccttaacaagtgc 45312730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 25021927 - 25022052
Alignment:
Q  43 caaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttg 142  Q
    ||||| || ||||| | |||||| || ||||||| || || ||||||||||||||| | ||||| ||||  ||||||||||  |||||||||| ||||||    
T  25021927 caaagggtcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgtttacaatgattgattttatcatccaaaaaattctagcgacgtagcttg 25022026  T
Q  143 ttgcctgtctgcctcctattcatgtg 168  Q
    |||  ||| ||||| |||||||||||    
T  25022027 ttgtttgtttgccttctattcatgtg 25022052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 4066829 - 4066738
Alignment:
Q  53 tgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttg 145  Q
    ||||||||||||| |||| ||||| || ||||| ||||||||| |||| |||||||||| |||||||||||| | ||| |||||| |||||||    
T  4066829 tgcatagcaatgtaatgtgtcctaggtccatgactgttgtgttcacgatgattggttttaccatccaaaaagct-tagtgacgcaacttgttg 4066738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 344 - 446
Target Start/End: Original strand, 29912103 - 29912204
Alignment:
Q  344 ggaaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaag 442  Q
    |||||||||||||||||||| |  ||||||||||||| ||| ||||||||| || || | ||||||| || ||||||||||| ||||||| || ||||||    
T  29912103 ggaaaatgttaacaagtgccct--gggcacttgataagaagtttaaagtagaaattttatcttaaaatttgtgtattcaactcattgaaacatcaaaaag 29912200  T
Q  443 caac 446  Q
    ||||    
T  29912201 caac 29912204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 6618261 - 6618178
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgtt 144  Q
    ||||| ||||||| || || |||||||||| |||||||||| |||||||||| ||||||||||| |||| || | |||||||||    
T  6618261 aatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacagcttgtt 6618178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 3049174 - 3049097
Alignment:
Q  365 taagggcacttgataaaaagcttaaagtagcaac-ttaccttaaaaattatgtattcaacttattgaaagattaaaaa 441  Q
    |||| ||||||||||| |||||||||||| |||| ||| |||| ||||| ||||||||| |||||||||| |||||||    
T  3049174 taagagcacttgataagaagcttaaagtaacaactttatcttagaaattgtgtattcaatttattgaaagtttaaaaa 3049097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 8227986 - 8228049
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgtt 144  Q
    ||||||||||||||||||||||| ||||||||| |||||||||  | || || |||||||||||    
T  8227986 catgaatgttgtgtttacgaggaatggttttgctatccaaaaaaatttaacggcgcagcttgtt 8228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 28196207 - 28196105
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||| |||||||||||| |||||  | ||||| | |||||| ||||||||||  | || | |||||||||||||| | |||| ||||| ||||||||    
T  28196207 gttgaccatctacgtagagttcaaaggatcatgcacaacaatgtcatgtctcctagatccacggatgttgtgtttacgggaattgattttgtcatccaaa 28196108  T
Q  122 aag 124  Q
    |||    
T  28196107 aag 28196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 37953283 - 37953234
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaaaag 508  Q
    ||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  37953283 aaatttatcaattatttctatttttgaatccttaacaagtgtcctaaaag 37953234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 121843 - 121903
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttg 112  Q
    ||||||| |||||| |||||  |||||| |||| ||||||||||||||||||||| |||||    
T  121843 atgcatatcaatgtcatgtcatctaagtccatggatgttgtgtttacgaggattgattttg 121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 500198 - 500154
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||    
T  500198 catgaatgttgtgtttacgaggattgattttaccattcaaaaagg 500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 3863331 - 3863245
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaa---tgttgtgtttacgaggattg 106  Q
    |||||||||||| |||||| ||||| ||  ||||||||||||| || | ||||||||  |||||   ||||||||||||||||||||    
T  3863331 ttgaccttctacatagagttcaaagggtagtgcatagcaatgtcatctttcctaagtctatgaatattgttgtgtttacgaggattg 3863245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 6792245 - 6792165
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagctt 141  Q
    ||||| ||||||| ||||| ||| ||||||||||||||||  |||||||||| |||| | |||| ||||||| | ||||||    
T  6792245 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatcaagaaagatctagcggcacagctt 6792165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 24350880 - 24350915
Alignment:
Q  88 gttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24350880 gttgtgtttacgaggattggttttgccctccaaaaa 24350915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 26033676 - 26033727
Alignment:
Q  94 tttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttg 145  Q
    |||| |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  26033676 tttaagaggattggttttgtcatctaaaaaggattagcgacgcagcttgttg 26033727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 32615801 - 32615848
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaagcttaaagtag 394  Q
    ||||||||||||||||| | |||||||||||||| ||| |||||||||    
T  32615801 aaatgttaacaagtgcccttagggcacttgataagaagtttaaagtag 32615848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 41235968 - 41235921
Alignment:
Q  347 aaatgttaacaagtgccataagggcacttgataaaaagcttaaagtag 394  Q
    ||||| ||||||||| ||| |||||||||||||||||| |||||||||    
T  41235968 aaatgctaacaagtgtcattagggcacttgataaaaagtttaaagtag 41235921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 4073549 - 4073427
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||  |||   ||| |||| |||||||||||||| |||| ||| |  | | ||||||||||||||||||| |||| ||||  ||||||||    
T  4073549 gttgaccttctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgtttacgagaattgattttatcatccaaa 4073450  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    || |  ||||||| || ||||||    
T  4073449 aaagcttagcgacacaacttgtt 4073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 8714725 - 8714814
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttg 142  Q
    ||||||| |||||||||| ||| || | |||||||||||||||||| ||  |||| |||| ||||| |||||||  |||| ||||||||||    
T  8714725 atgcatatcaatgttatggctcata-gatcatgaatgttgtgtttaagaaaattgattttaccatctaaaaagggttagcaacgcagcttg 8714814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 505
Target Start/End: Original strand, 39082531 - 39082577
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  39082531 aaatttatcaattattttcctttttgaatctttaacaagtgccctaa 39082577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 5329694 - 5329843
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||| | | |||| ||||| || ||| | | |||| | |||||||||| ||  || ||||||||||||| |||||||  ||||| ||||||||    
T  5329694 gttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtgtttatgaggattaattttgacatccaaa 5329793  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||| ||| |||| || ||| || |   | ||||| ||||||||||||||    
T  5329794 aaggcctaacgacacaacttatttcacatttgccttctattcatgtgtaa 5329843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 7176572 - 7176617
Alignment:
Q  459 aaatttaacaattatttcct-tttttgaatccttaacaagtgccct 503  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||    
T  7176572 aaatttataaattatttcctctttttgaatccttaacaagtgccct 7176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 7e-45; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 34644581 - 34644413
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||    
T  34644581 gttgaccttctacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgccatccaaa 34644482  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    || |||||||| ||||| |||||||| |  | ||||||||| |||| ||  || |||||||||||||||    
T  34644481 aaagtctagcggcgcagtttgttgcccgcttacctcctatttatgtatatataatattgatagtaaata 34644413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 47459705 - 47459530
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgc 113  Q
    ||||| ||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||  || ||||||||||||||||| |||| ||| ||    
T  47459705 cagaggcagttgaccttctacatagagtccaaaggaatatgcatagcaatgttatgtctcctaagtctataaatgttgtgtttacgagaattgatttagc 47459606  T
Q  114 catccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||| ||||||||||||||| |||||||||||| |||  || |||||||||||||||||| | ||||||| |||||||    
T  47459605 cattcaaaaaggtctagcg-cgcagcttgttgtctgcttggctcctattcatgtgtaaggaatattgatcgtaaata 47459530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 5454051 - 5453942
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattg 180  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||| |||||    
T  5454051 catgaatgttgtgtttacaaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaatattg 5453952  T
Q  181 atagtaaata 190  Q
    ||||||||||    
T  5453951 atagtaaata 5453942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 48841172 - 48841340
Alignment:
Q  20 cagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatcca 119  Q
    ||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||| |  |||||| || ||||||||||||||| |||||| |||||    
T  48841172 cagttgaccttctacatagagtctaaagagttatgcataataatgttatgtctcctaaatctatgaatattatgtttacgaggattgattttgcaatcca 48841271  T
Q  120 aaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaa 188  Q
    |||| |||||||  |||| ||||||| | |  | |||| |||||||||||||||| |||| ||||||||    
T  48841272 aaaaagtctagcagcgcaacttgttgtccgcttacctcatattcatgtgtaagtaatattaatagtaaa 48841340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 22346910 - 22346761
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||||||  ||||| ||||  || |||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||| |||||||||||||||    
T  22346910 gttgaccttctacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgttcacgaggattagttttgccatccaaa 22346811  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||| |||||||||||| | |  ||||| ||||||| ||||||    
T  22346810 aaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaa 22346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 24177607 - 24177728
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    ||||||||| |||||| |||| ||| |||||||||||||| || ||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||    
T  24177607 accttctacatagagttcaaaaagtcatgcatagcaatgtcatatctcctaggtccatgaatgttgtgttcacgaggattggttttgccaaccaaaaagg 24177706  T
Q  126 tctagcgacgcagcttgttgcc 147  Q
    |||||||  |||||||||||||    
T  24177707 tctagcggtgcagcttgttgcc 24177728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 52 - 171
Target Start/End: Original strand, 868525 - 868642
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtc 151  Q
    |||||||||||||| ||||||||||||| |||||||  |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |      
T  868525 atgcatagcaatgtcatgtctcctaagtccatgaat--tgtgttcacaaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgct 868622  T
Q  152 tgcctcctattcatgtgtaa 171  Q
    ||||| ||||||| ||||||    
T  868623 tgccttctattcaagtgtaa 868642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 2764494 - 2764372
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| || ||||||||| |||||||| | |||||||||||||| || || ||| |||||||||||||||| ||||| |||| |||||||||    
T  2764494 gttgaccttctacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttacgatgattgattttaccatccaaa 2764395  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    ||||| ||||| |||||||||||    
T  2764394 aaggtttagcggcgcagcttgtt 2764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 20259889 - 20260014
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||| ||||| ||||||| |||||| || |||||||||||||   |||||||||||||||||||||    
T  20259889 gttgaccttctacatagagttcaaaaggtcatgcatagtaatgtcatgtctcataagttaataaatgttgtgtttatatggattggttttgccatccaaa 20259988  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||| ||||| ||||||||    
T  20259989 aaggtctagcggcgcagtttgttgcc 20260014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 21473018 - 21472893
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||| || ||||||||||| ||| | ||||| |||||||||||||||||    
T  21473018 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgcgttcaggaggactggttttgccatccaaa 21472919  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||| |||| ||| |||||    
T  21472918 aaggtctagcggcgcaacttattgcc 21472893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 28041219 - 28041342
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||  |||||| ||||||||||||| | | |||||||| |||| |||||||||    
T  28041219 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtcctctaagtccatgaatgttgtgctcatgaggattgatttttccatccaaa 28041318  T
Q  122 aaggtctagcgacgcagcttgttg 145  Q
    ||||||||||| || |||||||||    
T  28041319 aaggtctagcggcggagcttgttg 28041342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 31737416 - 31737563
Alignment:
Q  23 ttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    ||||| |||||| |||||| ||||  || ||||||| ||||||||||| |||||  | ||||||| | |||||||||||||||| |||||||||||||||    
T  31737416 ttgacattctacatagagttcaaaaggtcatgcatatcaatgttatgtttcctagatccatgaat-tagtgtttacgaggattgattttgccatccaaaa 31737514  T
Q  123 aggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||  | ||| |||||||||||| |||| ||||| ||||||| ||||||    
T  31737515 aggcttggcggcgcagcttgttgtctgtttgccttctattcaagtgtaa 31737563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 30688534 - 30688423
Alignment:
Q  60 caatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcct 159  Q
    |||||| ||| |||||  || ||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||| |  ||||  ||    
T  30688534 caatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaaaggcctagcggcgcagcttgttgcccgcttgccatct 30688435  T
Q  160 attcatgtgtaa 171  Q
    ||||||||||||    
T  30688434 attcatgtgtaa 30688423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 1114023 - 1114085
Alignment:
Q  85 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  1114023 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctaacggcacagcttgttgcc 1114085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 2898717 - 2898595
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||   | ||||||| |||| | ||||||| || | |||||||||||||||||| |||||||| ||||||||||||||    
T  2898717 gttgaccttctacatagagttcaaaagatcatgcataacaatatcatgtctcatacgatcatgaatgttgtgtttaagaggattgattttgccatccaaa 2898618  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    ||||  ||||| || ||||||||    
T  2898617 aaggcttagcggcgtagcttgtt 2898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 21934357 - 21934265
Alignment:
Q  58 agcaatgttatgtctcctaagttcatgaatgtt-gtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctg 149  Q
    ||||||||| |||||||||  | |||||||||| || |||| |||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  21934357 agcaatgttttgtctcctagttccatgaatgtttgtatttaagaggattggttttgccatccaaaaagggttagcggcgcagcttgttgcctg 21934265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 28493482 - 28493572
Alignment:
Q  81 catgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||| |||||| | || || || ||||||| ||||||    
T  28493482 catgaatgttatgttcacgaggattgattttgccatccaaaaaggtctagcggcgcagtttgttgtccgtttgtcttctattcaagtgtaa 28493572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 19035426 - 19035345
Alignment:
Q  90 tgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| | |  ||||| ||||||| ||||||    
T  19035426 tgtgttcacgaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgtccgattgccttctattcaagtgtaa 19035345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 45659768 - 45659847
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagc 131  Q
    |||||||||||||| |||||||||| ||  || ||||| |||||||||||||  ||||||| || |||||||||||||||    
T  45659768 atgcatagcaatgtcatgtctcctaggtcaataaatgtcgtgtttacgaggaccggttttgtcacccaaaaaggtctagc 45659847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 4862081 - 4862207
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattg-gttttgccatccaa 120  Q
    ||||||||||||| |||||| ||||| || ||||||| |||||| | ||| | ||  | ||||||||||||| ||||||||||||  |||||||||  |     
T  4862081 gttgaccttctacatagagttcaaagggtcatgcataacaatgtcacgtcccttagatccatgaatgttgtgattacgaggattgatttttgccatatat 4862180  T
Q  121 aaaggtctagcgacgcagcttgttgcc 147  Q
     |||| |||||| ||||||||||||||    
T  4862181 gaaggcctagcggcgcagcttgttgcc 4862207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 7213183 - 7213109
Alignment:
Q  97 acgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||| |||||||||| |||||||||||||||||||| |||| ||||||||| |  ||||| ||||||| ||||||    
T  7213183 acgatgattggttttaccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaa 7213109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 45835338 - 45835380
Alignment:
Q  82 atgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  45835338 atgaatgttgtgtttacgaggattgattttgccatccaaaaag 45835380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 25375961 - 25376072
Alignment:
Q  62 atgttatgtctcctaagttcatgaatgt--tgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcct 159  Q
    |||| ||| |||||| ||||||||||||  |||||||| ||| ||| ||||| | ||||||||||| ||| ||||| | |||||||  ||| ||||| ||    
T  25375961 atgtcatgactcctatgttcatgaatgtgttgtgtttatgagaattagttttactatccaaaaaggcctaacgacgtaacttgttgtttgtttgccttct 25376060  T
Q  160 attcatgtgtaa 171  Q
    ||||||||||||    
T  25376061 attcatgtgtaa 25376072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 4611159 - 4611097
Alignment:
Q  67 atgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtcta 129  Q
    |||||||||| || ||||||| ||||||| |||| ||||| ||||| ||||||||||||||||    
T  4611159 atgtctcctaggtccatgaatattgtgttcacgatgattgattttgtcatccaaaaaggtcta 4611097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 7483839 - 7483781
Alignment:
Q  82 atgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagct 140  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||  ||||| |||||||    
T  7483839 atgaatgttgtgtttacgaagattagttttgccatctaaaaaggcttagcggcgcagct 7483781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 505
Target Start/End: Complemental strand, 36995265 - 36995219
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  36995265 aaatttaccaattatttccatttttgtatccttaacaagtgccctaa 36995219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 6670211 - 6670298
Alignment:
Q  36 tagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    |||||| |||||||| ||||||  |||||| || |||||||  |||||||||||| | |||||||  |||  ||||||||||||||||    
T  6670211 tagagttcaaagagtcatgcattacaatgtcatatctcctagattcatgaatgttatatttacgataattaattttgccatccaaaaa 6670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 16323961 - 16324003
Alignment:
Q  88 gttgtgtttacgaggattggttttgccatccaaaaaggtctag 130  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    
T  16323961 gttgtgtttacgaggattggtttaaccatccaaaaaggcctag 16324003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 17077971 - 17078033
Alignment:
Q  85 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||| | || |||||||||||||||| ||||| ||||| || ||||| ||||||||    
T  17077971 aatgttgtgttcatgatgattggttttgccatctaaaaaagtctaacggcgcagattgttgcc 17078033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 18802996 - 18802924
Alignment:
Q  95 ttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtg 168  Q
    ||||||| |||| |||||| |||||||||| ||||||||| |||||| ||| |||| || || |||||||||||    
T  18802996 ttacgagaattgattttgcaatccaaaaag-tctagcgacacagcttattgtctgtttgtcttctattcatgtg 18802924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 41024759 - 41024795
Alignment:
Q  456 atgaaatttaacaattatttccttttttgaatccttaa 493  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41024759 atgaaatttaacaattatttcctttttt-aatccttaa 41024795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 28225015 - 28224847
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||||||||||||  ||||||||  |||| |||||||||||| ||  |||||||||||||||| || |||| |||||||||||||||    
T  28225015 gttgaccttctacatagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgtgtttatgaagatttgttttgccatccaaa 28224916  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||| |||||||| ||||| |  || ||||||||||| |||||||| |||||||||||||||    
T  28224915 aaggtctagcggcgcagcttattgcccgcttgtctcctattcatttgtaagtaatattgatagtaaata 28224847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 27494304 - 27494169
Alignment:
Q  44 aaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgt 143  Q
    |||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||||  ||||||||||||||||||||||||||| || ||||||||||    
T  27494304 aaagggttatgtatagcaatgttatgtctcctaagtctatgaatattgtgtttacgaatattggttttgccatccaaaaaggtctaacggcgcagcttgt 27494205  T
Q  144 tgcctgtctgcctcctattcatgtgtaagtagtatt 179  Q
    ||||||  |||||||||||||| |||||||| ||||    
T  27494204 tgcctgcttgcctcctattcatatgtaagtaatatt 27494169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 17344653 - 17344504
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||| |||||| |||||||||| || |||||||||||||||||||||||||| |||| | |||||||    
T  17344653 gttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttttcgatccaaa 17344554  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||| || |||||||||||||| |  ||||| ||||||| ||||||    
T  17344553 aaggtctatcggcgcagcttgttgccggcttgccttctattcaagtgtaa 17344504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 4413158 - 4413283
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| ||| || ||||  || ||||||||||| || |||||||||| || ||||||||||||||| | |||||||| ||||||||||||||    
T  4413158 gttgaccttctacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatccaaa 4413257  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||| ||||||||||||||    
T  4413258 aaggtctagcggcgcagcttgttgcc 4413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 13413376 - 13413243
Alignment:
Q  12 agcagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggtttt 111  Q
    ||||||| | ||||||||||||| |||||| ||||  || ||||||| |||||| |||||||||| || ||||||||||||||||| ||| |||||||||    
T  13413376 agcagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttatgagaattggtttt 13413277  T
Q  112 gccatccaaaaaggtctagcgacgcagcttgttg 145  Q
    |||||||||||||| ||| || | ||||||||||    
T  13413276 gccatccaaaaaggcctaacggctcagcttgttg 13413243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 41868000 - 41868124
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||||| |||||| |||||||| | || ||||||||||||||||||||||||||||||||||| |||||    
T  41868000 gttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgtgtttacgaggattggttttgcca-ccaaa 41868098  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||| ||||||| |||| |||||||||    
T  41868099 aagatctagcggcgcaacttgttgcc 41868124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 9685510 - 9685632
Alignment:
Q  25 gaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    |||||||||  |||||| ||||  || ||| |||||||||| |||||||||| || ||||||||||||||| || | ||||| |||||||||||||||||    
T  9685510 gaccttctatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacaaagattgtttttgccatccaaaaag 9685609  T
Q  125 gtctagcgacgcagcttgttgcc 147  Q
    |||||||| ||||||||||||||    
T  9685610 gtctagcggcgcagcttgttgcc 9685632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 27502377 - 27502269
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||| ||||||| ||||||||||||||| | ||||||||||  |  ||||||||||||||||||| ||||| |||||| |||||||    
T  27502377 gttgaccttctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaatgttgtgtttacgaagattgattttgcaatccaaa 27502278  T
Q  122 aaggtctag 130  Q
    |||||||||    
T  27502277 aaggtctag 27502269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 44686431 - 44686348
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggatt 105  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  44686431 gttgaccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtgaatgttgtgtttacgaggatt 44686348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 18745046 - 18745170
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||| |||||||| |||||| ||||   | |||||||||||||| || | ||||| ||  ||||||||||||||||  ||||||||||||||||||||||    
T  18745046 gttggccttctacatagagttcaaaagatcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgtttataaggattggttttgccatccaaa 18745145  T
Q  122 aaggtctagcgacgcagcttgttgc 146  Q
    ||||||||||| |||||||| ||||    
T  18745146 aaggtctagcggcgcagcttattgc 18745170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 15515302 - 15515388
Alignment:
Q  85 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||| ||| ||||||    
T  15515302 aatgttgtgttcacgaggattggttttgccatccaaaaaagtctagcggcgcagtttgttgcctgtttgccttctactcaagtgtaa 15515388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 3208406 - 3208485
Alignment:
Q  92 tgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  3208406 tgtttacgaggattggttttgccatccaaaaaggtttagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 3208485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 11921297 - 11921418
Alignment:
Q  17 agacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccat 116  Q
    |||| ||||||||||||| |||||| ||||| |||||      |||| |||| ||| ||| || |||||||||||||||||| |||||| |||| |||||    
T  11921297 agactgttgaccttctacatagagttcaaagggttat------caattttatatcttctaggtccatgaatgttgtgtttactaggattagtttcgccat 11921390  T
Q  117 ccaaaaaggtctagcgacgcagcttgtt 144  Q
    |||||||| ||||||| |||||||||||    
T  11921391 ccaaaaagatctagcgtcgcagcttgtt 11921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 30602430 - 30602355
Alignment:
Q  96 tacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||| |  ||||| ||||||||||||||    
T  30602430 tacgaggattggttttgccatccaaaaaggcctagcagcgcagcttgttgcccgcatgccttctattcatgtgtaa 30602355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 7760937 - 7761062
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| |||||  | |||| ||||||||| ||||||| |||||||| ||||| |||| ||||||  |||| ||||| ||||||||    
T  7760937 gttgaccttctacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgtgcttacgaaaattgattttgacatccaaa 7761036  T
Q  122 aaggtctagcgacgcagcttgttgcc 147  Q
    ||||  ||||| |||| ||| |||||    
T  7761037 aaggcttagcggcgcaacttattgcc 7761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 41702209 - 41702135
Alignment:
Q  100 aggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||    ||||| |||||||||||||||||    
T  41702209 aggattggttttgccatccaaaaaggcctagtggcgcagcttgttgcccacttgccttctattcatgtgtaagta 41702135  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 20143119 - 20143179
Alignment:
Q  104 ttggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattca 164  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||||    
T  20143119 ttggttttgccatccaaaaaggtctagcggcgcaacttgttgtctgtttgccttctattca 20143179  T

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Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 5532435 - 5532314
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||| ||||||| |||||| ||||| || ||||| | |||||  ||| |||||||||||||||||| ||||||||| ||||||| ||||  ||||||||    
T  5532435 gttgagcttctacatagagttcaaagggtcatgcacaacaatgccatgactcctaagttcatgaatg-tgtgtttacaaggattgattttctcatccaaa 5532337  T
Q  122 aaggtctagcgacgcagcttgtt 144  Q
    | || ||| || |||| ||||||    
T  5532336 acggcctaacggcgcaacttgtt 5532314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 42122763 - 42122713
Alignment:
Q  91 gtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagctt 141  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  42122763 gtgtttacgaggactggttttgccatccaaaaaagtctagcggcgcagctt 42122713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 44684955 - 44685053
Alignment:
Q  27 ccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 125  Q
    |||||||| |||||| ||||| || ||||||| |||| ||||||||  ||||| ||||||||||||||||| ||| ||| |||||  |||| |||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtgtttatgagaattagttttttcatctaaaaagg 44685053  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 1296175 - 1296276
Alignment:
Q  28 cttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtc 127  Q
    |||||||||||||| ||||| || |||||||| ||| | |||| ||||  ||  ||||||||| |||||| ||| ||||||||| | |||||||||||||    
T  1296175 cttctacgtagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaatgttttgtttatgagaattggttttacaatccaaaaaggtc 1296274  T
Q  128 ta 129  Q
    ||    
T  1296275 ta 1296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 10296655 - 10296720
Alignment:
Q  59 gcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||||||||||  ||||||| |||| |||||| ||||| ||||||| ||||||||||||||||||    
T  10296655 gcaatgttatgtaccctaagtccatggatgttgcgtttaagaggattagttttgccatccaaaaag 10296720  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 16351936 - 16352037
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || ||||| | |||||| ||||||| || || ||||||| || ||||||||| ||||| |||||||||| |||    
T  16351936 gttgaccttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgtttacgatgattgtttttgccatctaaa 16352035  T
Q  122 aa 123  Q
    ||    
T  16352036 aa 16352037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 10587144 - 10587199
Alignment:
Q  119 aaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagta 174  Q
    |||||||||||||| || ||||||||||| || ||||| |||||||||||||||||    
T  10587144 aaaaaggtctagcggcgtagcttgttgcccgtttgccttctattcatgtgtaagta 10587199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 23485058 - 23485129
Alignment:
Q  52 atgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaa 123  Q
    ||||||| ||||| ||||||||||| || |||||| ||||||||||| |  ||||||||||||| |||||||    
T  23485058 atgcataacaatgctatgtctcctaggtccatgaacgttgtgtttacaaaaattggttttgccaaccaaaaa 23485129  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 38723985 - 38724052
Alignment:
Q  123 aggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||  ||||||||||||  |  ||||||||||| ||||||||||| |||||||||||||||    
T  38723985 aggtctagcggtgcagcttgttgctcgcttgcctcctatttatgtgtaagtaatattgatagtaaata 38724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 3825741 - 3825639
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    |||||||||| || | |||| |||||| | |||||||||||||| |||||| ||| |  ||| ||||||||||||| || ||| | ||||| ||||||||    
T  3825741 gttgaccttcaacatcgagttcaaagaatcatgcatagcaatgtcatgtcttctaggaccataaatgttgtgtttatgaagatcgattttgtcatccaaa 3825642  T
Q  122 aag 124  Q
    |||    
T  3825641 aag 3825639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 19161879 - 19161977
Alignment:
Q  26 accttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaag 124  Q
    ||||| ||| |||||| ||||  || ||||||| |||||| |||||||||| ||  ||||||  ||||||| ||||||||| ||||| |||||||||||    
T  19161879 accttttacatagagttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgtgttttcgaggattgattttgtcatccaaaaag 19161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 1900668 - 1900623
Alignment:
Q  349 atgttaacaagtgccataagggcacttgataaaaagcttaaagtag 394  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||    
T  1900668 atgttaacaagtgccctaaggacacttgataagaagcttaaagtag 1900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 32612326 - 32612379
Alignment:
Q  94 tttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||| ||||||||    
T  32612326 tttacgaggattggttttgccatctgaaaaggtccggcgacgcagtttgttgcc 32612379  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 32029178 - 32029261
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggatt 105  Q
    ||||||||||||| |||||| |||||||| || |||| |||||| ||||||  || | |||||||| | |||||||||| ||||    
T  32029178 gttgaccttctacatagagttcaaagagtcatccataacaatgtcatgtcttataggatcatgaatatcgtgtttacgaagatt 32029261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 34814902 - 34814961
Alignment:
Q  14 cagagacagttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctc 73  Q
    ||||||| ||||||||||||| |||||| ||||  || ||||||| ||||||||||||||    
T  34814902 cagagactgttgaccttctacatagagttcaaatggtcatgcataacaatgttatgtctc 34814961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 506
Target Start/End: Original strand, 39792069 - 39792116
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaaa 506  Q
    |||||| ||||||||||| |||||||||| ||||||||||| ||||||    
T  39792069 aaattttacaattatttctttttttgaattcttaacaagtgtcctaaa 39792116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 492
Target Start/End: Original strand, 42088433 - 42088581
Alignment:
Q  345 gaaaatgttaacaagtgccataagggcacttgataaaaagcttaaagtagcaactt-accttaaaaattatgtattcaacttattgaaagattaaaaagc 443  Q
    ||||||| ||||||||||| ||| | || | ||||| || |||||| ||| ||||| | |||  ||||| | |||||||| |||||||||||||||||||    
T  42088433 gaaaatgctaacaagtgccctaaagacattagataagaaacttaaaatagtaactttatcttggaaattgtttattcaacctattgaaagattaaaaagc 42088532  T
Q  444 aacnnnnnnnatatgaaatttaacaattatttccttttttgaatcctta 492  Q
    |||       | || |||||  ||| ||||||||||||||| |||||||    
T  42088533 aactttttctacataaaattccacatttatttccttttttgtatcctta 42088581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 446
Target Start/End: Original strand, 44949247 - 44949286
Alignment:
Q  407 aaaattatgtattcaacttattgaaagattaaaaagcaac 446  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  44949247 aaaattgtgtattcaacttattgaaagattaaaaaacaac 44949286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 26407842 - 26407896
Alignment:
Q  78 gttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcg 132  Q
    ||||||||||||||||||||||| ||||| |||||| |||| |||| || |||||    
T  26407842 gttcatgaatgttgtgtttacgatgattgattttgctatcctaaaatgtttagcg 26407896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 33283603 - 33283517
Alignment:
Q  36 tagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaa 122  Q
    |||||| ||||||||||||||||| ||||| ||||||  |||||  || ||| |  |||||||||| ||| ||||||||||| ||||    
T  33283603 tagagttcaaagagttatgcatagtaatgtcatgtcttgtaagtctataaatatcatgtttacgagaattagttttgccatctaaaa 33283517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 34250153 - 34250247
Alignment:
Q  96 tacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaagtagtattgatagtaaata 190  Q
    ||||||||||  ||||| ||||||||||| ||||    ||||  |||||| | || |||||| |||||||||||||||| |||||||| ||||||    
T  34250153 tacgaggattaattttgtcatccaaaaagatctaatagcgcaatttgttgtcggtttgcctcatattcatgtgtaagtaatattgatattaaata 34250247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 505
Target Start/End: Complemental strand, 39575507 - 39575461
Alignment:
Q  459 aaatttaacaattatttccttttttgaatccttaacaagtgccctaa 505  Q
    |||||||  ||||||||||| |||||||||||||| |||||||||||    
T  39575507 aaatttataaattatttcctcttttgaatccttaataagtgccctaa 39575461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 446
Target Start/End: Complemental strand, 13266491 - 13266462
Alignment:
Q  417 attcaacttattgaaagattaaaaagcaac 446  Q
    ||||||||||||||||||||||||||||||    
T  13266491 attcaacttattgaaagattaaaaagcaac 13266462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 103121 - 102972
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| | |||  ||||  || ||||||| ||||||  ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  103121 gttgaccttctacatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaa 103022  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||||||||| |||| ||||||||| |  ||||| ||||||| ||||||    
T  103021 aaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaa 102972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 33265 - 33116
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||||| |||||| ||||  || |||||||||||| |||||||||||| || |||||| || |||||||||||||||| ||||| ||||||||    
T  33265 gttgaccttctacatagagttcaaaaggtcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgtttacgaggattgattttgtcatccaaa 33166  T
Q  122 aaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    ||||  | |||  |||||||||||||||  ||||| ||||||| ||||||    
T  33165 aaggcttggcggtgcagcttgttgcctgcttgccttctattcaagtgtaa 33116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 6837 - 6754
Alignment:
Q  88 gttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcctgtctgcctcctattcatgtgtaa 171  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  6837 gttgtgtttacgagaattggttttgccatccaaaaaggtctagcgccgcagcttgttgcccgcttgccttctattcaagtgtaa 6754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 276 - 379
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 121  Q
    ||||||||||| | || ||| |||| ||| || ||||||||||| ||||||||||  |  ||||| |||||||||||||||||| |||||||||||||||    
T  276 gttgaccttctgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgtgtttacgaggattagttttgccatccaaa 375  T
Q  122 aagg 125  Q
    ||||    
T  376 aagg 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 5276 - 5214
Alignment:
Q  85 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  5276 aatgttgtgttcacgaggattgactttgccatccaaaaaggtctagcggcgcagcttgttgcc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 7579 - 7496
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgtt 144  Q
    ||||| ||||||| || || |||||||||| |||||||||| |||||||||| ||||||||||| |||| || | |||||||||    
T  7579 aatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacagcttgtt 7496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 6349 - 6279
Alignment:
Q  22 gttgaccttctacgtagagtccaaagagttatgcatagcaatgttatgtctcctaagttcatgaatgttgt 92  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||| || ||||||||||||    
T  6349 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 16807 - 16871
Alignment:
Q  83 tgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagcttgttgcc 147  Q
    |||||||||| || ||||| |||| |||||||||||||||||||||||||  ||||| |||||||    
T  16807 tgaatgttgtattcacgagaattgattttgccatccaaaaaggtctagcggtgcagcatgttgcc 16871  T

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Target: scaffold0514 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 4378 - 4458
Alignment:
Q  61 aatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcgacgcagctt 141  Q
    ||||| ||||||| ||||| ||| ||||||||||||||||  |||||||||| |||| | |||| ||||||| | ||||||    
T  4378 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatcaagaaagatctagcggcacagctt 4458  T

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