View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9164_high_27 (Length: 245)
Name: NF9164_high_27
Description: NF9164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9164_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 28518115 - 28518327
Alignment:
| Q |
13 |
tatacttgatagtgatgtgtgtcttggaaattgtaacattaaaacttctctaactctactacttattatcaaactttcttgagacaagaaaatcacaatg |
112 |
Q |
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| T |
28518115 |
tatacttgatagtgatgtgtgtcttggaaattgtaacattaaaacttctctaactctactacttattatcaaactttcttgagacaagaaaatcacaatg |
28518214 |
T |
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| Q |
113 |
caatttgtgtttttaatcacaagaagataacaacaaacataaataaaatgaaaatgttaatgtaagtttcacttgaagaagcaatcctaggctccatatg |
212 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28518215 |
caatttgtgtttttaatcac---aagataacaacaaacataaataaaatgaaaatgttaatgtaagtttcacttgaagaagcaatcctaggctccatatg |
28518311 |
T |
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| Q |
213 |
tgacattgacttatgt |
228 |
Q |
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|||||||||||||||| |
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| T |
28518312 |
tgacattgacttatgt |
28518327 |
T |
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