View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9165_low_36 (Length: 239)
Name: NF9165_low_36
Description: NF9165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9165_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19931655 - 19931877
Alignment:
| Q |
1 |
gccatggtgtaattgcaacacttgcaaaacattcttaaccatgagttggtccaataaatttgtaaaccttgtggattattatacacatcttcttcaagaa |
100 |
Q |
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| T |
19931655 |
gccatggtgtaattgcaacacttgcaaaacattcttaaccatgagttggtccaataaatttgtaaaccttgtggattattatacacatcttcttcaagaa |
19931754 |
T |
|
| Q |
101 |
tcaccaacaggaacaattcatgtgcatgtgttgggtaacacaataacctcaaatccagaaaacgtggagtatatactcaaaacaaatttcaacaattacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19931755 |
tcaccaacaggaacaattcatgtgcatgtgttgggtaacacaataacctcaaatccagaaaacgtggagtatatactcaaaacaaatttcaacaattacc |
19931854 |
T |
|
| Q |
201 |
ctaaaggtaaacaattttctaca |
223 |
Q |
| |
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|||||||||||||||| |||||| |
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| T |
19931855 |
ctaaaggtaaacaattctctaca |
19931877 |
T |
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