View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9166_low_9 (Length: 666)

Name: NF9166_low_9
Description: NF9166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9166_low_9
NF9166_low_9
[»] chr7 (36 HSPs)
chr7 (17-364)||(11699634-11699982)
chr7 (473-651)||(11700066-11700247)
chr7 (582-651)||(26459404-26459473)
chr7 (582-650)||(39631857-39631925)
chr7 (582-650)||(18363709-18363777)
chr7 (599-651)||(21570026-21570078)
chr7 (617-651)||(21558176-21558210)
chr7 (594-648)||(30442513-30442567)
chr7 (594-647)||(7499922-7499975)
chr7 (618-651)||(13106776-13106809)
chr7 (594-647)||(20335829-20335882)
chr7 (617-650)||(43215232-43215265)
chr7 (594-647)||(43590932-43590985)
chr7 (617-649)||(17041008-17041040)
chr7 (617-651)||(2882998-2883032)
chr7 (617-651)||(2962507-2962541)
chr7 (617-651)||(7744106-7744140)
chr7 (617-651)||(15137601-15137635)
chr7 (617-647)||(22760911-22760941)
chr7 (605-651)||(27313728-27313774)
chr7 (617-647)||(29916806-29916836)
chr7 (617-651)||(41519258-41519292)
chr7 (618-651)||(7721418-7721451)
chr7 (418-447)||(11700037-11700066)
chr7 (608-649)||(14058292-14058333)
chr7 (608-649)||(14368320-14368361)
chr7 (617-650)||(23552166-23552199)
chr7 (595-648)||(29385740-29385793)
chr7 (617-646)||(30301928-30301957)
chr7 (594-651)||(30579360-30579417)
chr7 (622-651)||(33222423-33222452)
chr7 (594-651)||(33869439-33869496)
chr7 (618-650)||(9608624-9608656)
chr7 (618-650)||(9836196-9836228)
chr7 (619-651)||(25655222-25655254)
chr7 (595-647)||(38374597-38374649)
[»] chr4 (24 HSPs)
chr4 (581-651)||(7949448-7949518)
chr4 (582-651)||(37109345-37109414)
chr4 (582-651)||(46545724-46545793)
chr4 (591-651)||(21404815-21404875)
chr4 (594-650)||(23377981-23378037)
chr4 (594-649)||(49576890-49576945)
chr4 (582-651)||(19680782-19680851)
chr4 (594-651)||(31759652-31759709)
chr4 (594-651)||(37274453-37274510)
chr4 (584-651)||(38869783-38869850)
chr4 (608-647)||(47044756-47044795)
chr4 (617-651)||(4249225-4249259)
chr4 (617-647)||(46295145-46295175)
chr4 (617-651)||(51622533-51622567)
chr4 (594-651)||(2622389-2622446)
chr4 (617-650)||(7292793-7292826)
chr4 (617-650)||(7539638-7539671)
chr4 (597-650)||(8030199-8030252)
chr4 (617-650)||(9693493-9693526)
chr4 (594-651)||(10048005-10048062)
chr4 (594-647)||(19238575-19238628)
chr4 (617-650)||(24991575-24991608)
chr4 (619-651)||(6666420-6666452)
chr4 (617-649)||(38838845-38838877)
[»] chr8 (24 HSPs)
chr8 (582-647)||(19703485-19703550)
chr8 (591-651)||(13129690-13129750)
chr8 (582-650)||(44780109-44780177)
chr8 (582-651)||(35690058-35690127)
chr8 (582-649)||(3624593-3624660)
chr8 (617-651)||(33017262-33017296)
chr8 (597-650)||(11819804-11819857)
chr8 (582-647)||(16852353-16852418)
chr8 (582-651)||(18540311-18540380)
chr8 (597-650)||(27750758-27750811)
chr8 (594-647)||(28783085-28783138)
chr8 (594-649)||(968387-968442)
chr8 (612-651)||(3174799-3174838)
chr8 (619-650)||(43594313-43594344)
chr8 (617-651)||(6536568-6536602)
chr8 (617-651)||(8794339-8794373)
chr8 (617-651)||(23361643-23361677)
chr8 (582-648)||(29431024-29431090)
chr8 (600-650)||(33727868-33727918)
chr8 (582-647)||(2203505-2203570)
chr8 (617-650)||(31408117-31408150)
chr8 (617-649)||(22193360-22193392)
chr8 (598-650)||(26061717-26061769)
chr8 (597-649)||(35641897-35641949)
[»] chr5 (17 HSPs)
chr5 (582-651)||(25627070-25627139)
chr5 (617-651)||(14285209-14285243)
chr5 (617-651)||(43442244-43442278)
chr5 (582-651)||(3252283-3252352)
chr5 (598-647)||(3315244-3315293)
chr5 (582-651)||(7918463-7918532)
chr5 (618-650)||(25979219-25979251)
chr5 (582-650)||(26078046-26078114)
chr5 (582-644)||(16436631-16436692)
chr5 (617-651)||(16773855-16773889)
chr5 (617-651)||(34984854-34984888)
chr5 (617-651)||(37258360-37258394)
chr5 (594-650)||(17028259-17028315)
chr5 (617-653)||(17155870-17155906)
chr5 (582-650)||(18437098-18437166)
chr5 (619-651)||(31074282-31074314)
chr5 (599-639)||(40461619-40461659)
[»] chr2 (21 HSPs)
chr2 (582-648)||(42327392-42327458)
chr2 (594-651)||(13803520-13803577)
chr2 (594-647)||(37480100-37480153)
chr2 (594-648)||(30808644-30808698)
chr2 (582-651)||(4060208-4060277)
chr2 (591-648)||(7599978-7600035)
chr2 (594-651)||(11251112-11251169)
chr2 (594-651)||(19244134-19244191)
chr2 (594-647)||(23052521-23052574)
chr2 (582-647)||(29503284-29503349)
chr2 (617-649)||(4262298-4262330)
chr2 (617-651)||(40416384-40416418)
chr2 (582-651)||(42922427-42922497)
chr2 (617-650)||(12497777-12497810)
chr2 (594-647)||(12632743-12632796)
chr2 (594-647)||(19016056-19016109)
chr2 (617-650)||(21195671-21195704)
chr2 (598-647)||(40791488-40791537)
chr2 (594-650)||(11062385-11062441)
chr2 (595-647)||(21939121-21939173)
chr2 (619-651)||(40755644-40755676)
[»] scaffold0238 (1 HSPs)
scaffold0238 (582-651)||(2705-2774)
[»] scaffold0180 (1 HSPs)
scaffold0180 (582-651)||(19956-20025)
[»] scaffold0126 (1 HSPs)
scaffold0126 (594-651)||(25341-25398)
[»] scaffold0118 (1 HSPs)
scaffold0118 (582-651)||(41627-41696)
[»] chr3 (22 HSPs)
chr3 (582-651)||(27093355-27093424)
chr3 (582-644)||(8170685-8170747)
chr3 (582-651)||(10445133-10445203)
chr3 (594-648)||(19154656-19154710)
chr3 (582-651)||(16354886-16354955)
chr3 (617-650)||(37788460-37788493)
chr3 (617-649)||(14186695-14186727)
chr3 (582-650)||(32651433-32651501)
chr3 (594-649)||(21960576-21960631)
chr3 (617-648)||(30311354-30311385)
chr3 (617-651)||(8796087-8796121)
chr3 (617-651)||(15048055-15048089)
chr3 (617-651)||(28703398-28703432)
chr3 (617-651)||(39253745-39253779)
chr3 (617-651)||(53412993-53413027)
chr3 (617-647)||(54990750-54990780)
chr3 (617-650)||(3427548-3427581)
chr3 (597-650)||(8075122-8075175)
chr3 (594-647)||(14339635-14339688)
chr3 (608-649)||(20501735-20501776)
chr3 (618-651)||(34062542-34062575)
chr3 (618-651)||(34622535-34622568)
[»] chr1 (32 HSPs)
chr1 (582-651)||(2799875-2799944)
chr1 (594-651)||(10526848-10526905)
chr1 (594-649)||(51814519-51814574)
chr1 (617-651)||(3265972-3266006)
chr1 (617-651)||(33700767-33700801)
chr1 (618-651)||(1247162-1247195)
chr1 (597-650)||(6122822-6122875)
chr1 (582-651)||(8177176-8177245)
chr1 (582-651)||(9165189-9165258)
chr1 (582-651)||(17745250-17745319)
chr1 (582-651)||(36371483-36371552)
chr1 (582-650)||(42787221-42787289)
chr1 (598-650)||(44961794-44961846)
chr1 (611-647)||(45266876-45266912)
chr1 (617-648)||(15786317-15786348)
chr1 (620-651)||(29753700-29753731)
chr1 (617-651)||(4566596-4566630)
chr1 (617-651)||(6650643-6650677)
chr1 (617-651)||(8904462-8904496)
chr1 (617-647)||(19528325-19528355)
chr1 (604-646)||(38947471-38947513)
chr1 (585-650)||(14787331-14787396)
chr1 (582-651)||(21547474-21547543)
chr1 (594-647)||(24047100-24047153)
chr1 (582-651)||(31794258-31794327)
chr1 (594-647)||(52116779-52116832)
chr1 (594-650)||(11063581-11063637)
chr1 (617-649)||(12587318-12587350)
chr1 (599-643)||(21392867-21392911)
chr1 (594-646)||(37400299-37400351)
chr1 (619-651)||(40810517-40810549)
chr1 (617-649)||(51281399-51281431)
[»] scaffold0194 (1 HSPs)
scaffold0194 (594-649)||(13042-13097)
[»] chr6 (10 HSPs)
chr6 (582-650)||(12188298-12188366)
chr6 (597-645)||(14199947-14199995)
chr6 (594-649)||(33549129-33549184)
chr6 (585-651)||(3779355-3779421)
chr6 (617-650)||(13330135-13330168)
chr6 (594-651)||(14278105-14278162)
chr6 (598-651)||(15951296-15951349)
chr6 (617-649)||(6385910-6385942)
chr6 (617-645)||(10338174-10338202)
chr6 (617-649)||(28841462-28841494)
[»] scaffold0258 (1 HSPs)
scaffold0258 (594-649)||(15319-15374)
[»] scaffold0299 (1 HSPs)
scaffold0299 (617-651)||(11576-11610)
[»] scaffold0291 (1 HSPs)
scaffold0291 (617-647)||(2468-2498)
[»] scaffold0122 (1 HSPs)
scaffold0122 (582-643)||(6921-6982)
[»] scaffold0002 (1 HSPs)
scaffold0002 (582-651)||(94965-95034)
[»] scaffold0517 (1 HSPs)
scaffold0517 (594-646)||(7725-7777)


Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-154; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 17 - 364
Target Start/End: Original strand, 11699634 - 11699982
Alignment:
Q  17 tcacgaagtactctccaaagacatacccttctactccaacagtaaaaaatgtcgtttgggtctcatcgatttcgctttggcgaataataaatctccgctt 116  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699634 tcacgaagtactctccaaagacattcccttttactccaacagtaaaaaatgtcgtttgggtctcatcgatttcgctttggcgaataataaatctccgctt 11699733  T
Q  117 aatatgtttaatcaagatcctctttgccggtaatttcttccttccttt-tacctttatgttttcgtctcaaaaccgatccaaactgcaccgcaaacgcga 215  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||      |||||    
T  11699734 aatatgtttaatcaagatcctctttgccggtaatttcttcgttcctttcgccctttatgttttcgtctcaaaaccgatccaaactgcac------cgcga 11699827  T
Q  216 atagatagttattgttt------tgtttgtgtttgtgttggcagttcgaagttgatatgtaagttgactggtcataaggttaataagtcagaggaacata 309  Q
    |||||||||||||||||      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699828 atagatagttattgttttgtttgtgtttgtgtttgtgtttgcagttcgaagttgatatgtaagttgactggtcataaggttaataagtcagaggaacata 11699927  T
Q  310 tctggaagcatatgactgggaaaagatttctcaataaattaggtcagttttcttt 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699928 tctggaagcatatgactgggaaaagatttctcaataaattaggtcagttttcttt 11699982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 473 - 651
Target Start/End: Original strand, 11700066 - 11700247
Alignment:
Q  473 ccggcaatgtggattaacaacttattctcatatacctccttatgtattgactactgtttagattagggaaatttgagcttatcta---acataagttttg 569  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||   ||| ||||||||    
T  11700066 ccggcaatgtggattaacaacttattctcatatacgtgcttatgtattgactactgtttggattagggaaatttgagcttatctactgacaaaagttttg 11700165  T
Q  570 tgagagttaacctggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11700166 tgagagttaacccggcctagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 26459473 - 26459404
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| || ||||  |||||||||||||||||||||||||||||||||||    
T  26459473 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 582 - 650
Target Start/End: Original strand, 39631857 - 39631925
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || ||||||||| ||| || ||||  ||||||||||||||||||||||||||||||||||    
T  39631857 tggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctct 39631925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 582 - 650
Target Start/End: Original strand, 18363709 - 18363777
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || || ||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||||    
T  18363709 tggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 651
Target Start/End: Complemental strand, 21570078 - 21570026
Alignment:
Q  599 cttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  21570078 cttgggacttgagagtgcgctcctcctcaaggtctcaagttcgattttctctg 21570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 21558176 - 21558210
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  21558176 gctcctcctcaaggtctcaggttcgattctctctg 21558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 30442513 - 30442567
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    ||||||||| ||| || ||||| ||||||||||||||||| ||||||||||||||    
T  30442513 attggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 7499975 - 7499922
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| ||| |||||||| ||||||| || ||||||||||||||||||||    
T  7499975 attggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctc 7499922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 651
Target Start/End: Complemental strand, 13106809 - 13106776
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||||||||||||    
T  13106809 ctcctcctcaaggtctcaggttcgattctctctg 13106776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 20335882 - 20335829
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |||||| ||||  |||||||||| ||||||||||||||||||||    
T  20335882 attggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 43215232 - 43215265
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||||||||||||||||||    
T  43215232 gctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 43590932 - 43590985
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |||||| ||||  |||||||||||| ||||||||||||||||||    
T  43590932 attggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 649
Target Start/End: Complemental strand, 17041040 - 17041008
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||||||||||||||||||||||||||||    
T  17041040 gctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 2882998 - 2883032
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||| ||||||||||    
T  2882998 gctcctcctcaaggtctcaggttcaattctctctg 2883032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 2962507 - 2962541
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||| |||||||||||||||||||||    
T  2962507 gctcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 7744140 - 7744106
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||| |||||||||||    
T  7744140 gctcctcctcaaggtctcaggtttgattctctctg 7744106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 15137601 - 15137635
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||| |||||||||||    
T  15137601 gctcctcctcaaggtctcaggttagattctctctg 15137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Original strand, 22760911 - 22760941
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  22760911 gctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 27313774 - 27313728
Alignment:
Q  605 acttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||    
T  27313774 acttgggagtttgctcctcctcaaggtttcagattcgattctctctg 27313728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Complemental strand, 29916836 - 29916806
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  29916836 gctcctcctcaaggtctcaggttcgattctc 29916806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 41519292 - 41519258
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||| |||||||||    
T  41519292 gctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 7721418 - 7721451
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||| |||||||||||||||    
T  7721418 ctcctcctcaaggtctcatgttcgattctctctg 7721451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 447
Target Start/End: Original strand, 11700037 - 11700066
Alignment:
Q  418 attgtagggattagggaaatttggtcatcc 447  Q
    ||||||||||||||||||||||||||||||    
T  11700037 attgtagggattagggaaatttggtcatcc 11700066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 649
Target Start/End: Original strand, 14058292 - 14058333
Alignment:
Q  608 tgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||  |||| ||||||||||||||||||||||||||||    
T  14058292 tgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 649
Target Start/End: Original strand, 14368320 - 14368361
Alignment:
Q  608 tgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||  |||| ||||||||||||||||||||||||||||    
T  14368320 tgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 23552166 - 23552199
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||| ||||||||||||||    
T  23552166 gctcctcctcaaggtctcaagttcgattctctct 23552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 595 - 648
Target Start/End: Complemental strand, 29385793 - 29385740
Alignment:
Q  595 ttggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    |||||||| |||||  ||||  ||||||||||||||||||||||| ||||||||    
T  29385793 ttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctct 29385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 646
Target Start/End: Original strand, 30301928 - 30301957
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattct 646  Q
    ||||||||||||||||||||||||||||||    
T  30301928 gctcctcctcaaggtctcaggttcgattct 30301957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 30579360 - 30579417
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||| || ||||   | ||||||||||||||||||||||||| ||||||    
T  30579360 attggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctg 30579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 622 - 651
Target Start/End: Original strand, 33222423 - 33222452
Alignment:
Q  622 tcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||||||||    
T  33222423 tcctcaaggtctcaggttcgattctctctg 33222452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 33869496 - 33869439
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||| ||  |||  |||||| ||||||||||| ||||||||||||||||    
T  33869496 attggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctg 33869439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 618 - 650
Target Start/End: Complemental strand, 9608656 - 9608624
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||| ||||||||||||||||||||    
T  9608656 ctcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 618 - 650
Target Start/End: Complemental strand, 9836228 - 9836196
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||| ||||||||||||||||||||    
T  9836228 ctcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 651
Target Start/End: Complemental strand, 25655254 - 25655222
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||| |||||||||||||||||||    
T  25655254 tcctcctcaaggtttcaggttcgattctctctg 25655222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 595 - 647
Target Start/End: Complemental strand, 38374649 - 38374597
Alignment:
Q  595 ttggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| ||| | |||||  ||||||||||||||||| |||||||||||||    
T  38374649 ttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctc 38374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 581 - 651
Target Start/End: Complemental strand, 7949518 - 7949448
Alignment:
Q  581 ctggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||| ||||||||| ||| |  ||||  |||||||||||||||||||||||||||||||||||    
T  7949518 ctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 37109414 - 37109345
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| || ||||  |||||||||||||||||||||||||||||||||||    
T  37109414 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 46545724 - 46545793
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||||||| |||||||  ||||||||||||| |||||| ||||||| ||||||    
T  46545724 tggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctg 46545793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 651
Target Start/End: Complemental strand, 21404875 - 21404815
Alignment:
Q  591 ggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||| ||| |||||||||||    
T  21404875 ggcattgacttgagacctgagagtatgctcctcctcaaggtctcatgtttgattctctctg 21404815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 23377981 - 23378037
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||| ||| || ||||  ||||||||||||||||||||||||||||||||||    
T  23377981 attggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 594 - 649
Target Start/End: Complemental strand, 49576945 - 49576890
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||  |||||| ||||  |||||||||||||||||||||||||||||||||    
T  49576945 attggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 19680851 - 19680782
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||| ||||| |||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  19680851 tggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 31759709 - 31759652
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| |||||| ||||  |||||||||||||||||||| ||||||||| ||||    
T  31759709 attggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctg 31759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 37274510 - 37274453
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| ||| || ||||  ||||||||||||||||| |||||||||||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 651
Target Start/End: Original strand, 38869783 - 38869850
Alignment:
Q  584 gcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||| || ||||||||| ||  || ||||  ||||||||||||||||||||||||||||| |||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctg 38869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 647
Target Start/End: Original strand, 47044756 - 47044795
Alignment:
Q  608 tgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  47044756 tgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 4249225 - 4249259
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||| |||||||||||    
T  4249225 gctcctcctcaaggtctcaggtttgattctctctg 4249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Original strand, 46295145 - 46295175
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  46295145 gctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 51622533 - 51622567
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||| ||||||||    
T  51622533 gctcctcctcaaggtctcaggttcgactctctctg 51622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 2622446 - 2622389
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| ||| || ||||  |||||||||| | ||||||||||||||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctg 2622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 7292826 - 7292793
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||| |||||||||||||||||||||    
T  7292826 gctcctcctcaaagtctcaggttcgattctctct 7292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 7539638 - 7539671
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||||||||||||||||||||||||    
T  7539638 gctccttctcaaggtctcaggttcgattctctct 7539671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 650
Target Start/End: Complemental strand, 8030252 - 8030199
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||| ||||  ||||||||||||||||||| ||||||||| ||||    
T  8030252 ggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctct 8030199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 9693526 - 9693493
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||||||||||||| ||||    
T  9693526 gctcctcctcaaggtctcaggttcgattccctct 9693493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 10048005 - 10048062
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| ||| | |||||  |||||| |||| |||||||||||||||||||||||    
T  10048005 attggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctctg 10048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 19238628 - 19238575
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |||||| ||||  |||||||||| ||||||| ||||||||||||    
T  19238628 attggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 24991575 - 24991608
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||||||||||||| |||||    
T  24991575 gctcctcctcaaggtctcaggttcgattttctct 24991608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 651
Target Start/End: Complemental strand, 6666452 - 6666420
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||| |||||||||||||||||||||    
T  6666452 tcctcctcaagatctcaggttcgattctctctg 6666420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 38838845 - 38838877
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||||||||||| |||||||||||||||    
T  38838845 gctcctcctcaaggtcttaggttcgattctctc 38838877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 647
Target Start/End: Complemental strand, 19703550 - 19703485
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| || ||||||||| ||| |||||||  |||||||||||||||||||||||||||||||    
T  19703550 tggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 591 - 651
Target Start/End: Original strand, 13129690 - 13129750
Alignment:
Q  591 ggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| ||| |||||| |||| |||||||||||||||| |||||||||||||||||||    
T  13129690 ggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctg 13129750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 582 - 650
Target Start/End: Complemental strand, 44780177 - 44780109
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| |||||||||||| |||||| ||||  ||||||||||||||||||||||| ||||| ||||    
T  44780177 tggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 44780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 35690127 - 35690058
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||  || | ||| |||||||||||||||||||||||||||||||||||    
T  35690127 tggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctg 35690058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 582 - 649
Target Start/End: Original strand, 3624593 - 3624660
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||| || ||||||||| ||| || ||||  ||||||| |||||||||||||||||||||||||    
T  3624593 tggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 33017262 - 33017296
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  33017262 gctcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 11819804 - 11819857
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  11819804 ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactct 11819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 647
Target Start/End: Original strand, 16852353 - 16852418
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| || ||||||||| ||| || ||||  |||||||||| ||||||||||||||||||||    
T  16852353 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 18540311 - 18540380
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| || ||||   || |||||||||||||||||||||||||||||||    
T  18540311 tggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctg 18540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 27750758 - 27750811
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  27750758 ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 27750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 28783085 - 28783138
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||||||| || ||||  ||||||||||||||||||| |||||||||||    
T  28783085 attggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 968387 - 968442
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| ||| || ||||  |||||||||| ||||||||||||||||||||||    
T  968387 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 651
Target Start/End: Complemental strand, 3174838 - 3174799
Alignment:
Q  612 agttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  3174838 agtttgctcatcctcaaggtctcaggttcgattctctctg 3174799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 650
Target Start/End: Complemental strand, 43594344 - 43594313
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||||||||||||||||    
T  43594344 tcctcctcaaggtctcaggttcgattctctct 43594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 6536568 - 6536602
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||| ||||||||||    
T  6536568 gctcctcctcaaggtctcaggttcaattctctctg 6536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 8794373 - 8794339
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||| |||||||||||||||||||||||    
T  8794373 gctcctcctcagggtctcaggttcgattctctctg 8794339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 23361677 - 23361643
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||| ||||||||||    
T  23361677 gctcctcctcaaggtctcaggttcaattctctctg 23361643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 648
Target Start/End: Original strand, 29431024 - 29431090
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    |||||| |||| ||||||||| |||||| ||||  |||||||||  ||| |||||||||||||||||    
T  29431024 tggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctct 29431090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 650
Target Start/End: Complemental strand, 33727918 - 33727868
Alignment:
Q  600 ttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||  |||  ||||||||||||||||||||||||||||| ||||    
T  33727918 ttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctct 33727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 647
Target Start/End: Original strand, 2203505 - 2203570
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| || ||||||||| ||| || ||||  ||||||||||||||||||||| || ||||||    
T  2203505 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctc 2203570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 31408150 - 31408117
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||| ||||||||||||||||||    
T  31408150 gctcctcctcaaggtttcaggttcgattctctct 31408117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Complemental strand, 22193392 - 22193360
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||||||||||| |||||||||||||||    
T  22193392 gctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 598 - 650
Target Start/End: Original strand, 26061717 - 26061769
Alignment:
Q  598 gcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||  |||||| ||||| |||||| |||||||| |||||    
T  26061717 gcttgagacttgagagtatgctccttctcaatgtctcatgttcgattatctct 26061769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 597 - 649
Target Start/End: Complemental strand, 35641949 - 35641897
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| ||| ||||  |||||||||| | ||||||||||||||||||||    
T  35641949 ggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 25627070 - 25627139
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  ||||| ||||  |||||||||||||||||||||||||||||||||||    
T  25627070 tggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 14285209 - 14285243
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  14285209 gctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 43442244 - 43442278
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  43442244 gctcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 3252352 - 3252283
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||| ||||||||||| |||| | ||| |||||| | |||||||||||||||||||||    
T  3252352 tggcctagtggtattgacttgagacttgggagtgcactcttcctcaggctctcaggttcgattctctctg 3252283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 647
Target Start/End: Original strand, 3315244 - 3315293
Alignment:
Q  598 gcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |  |||| ||||||||||||||||||||||||||||||||    
T  3315244 gcttgagaccttggagtgcgctcctcctcaaggtctcaggttcgattctc 3315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 7918532 - 7918463
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || |||| | |||||||||||||||| |||||||||||||||||    
T  7918532 tggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctg 7918463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 650
Target Start/End: Original strand, 25979219 - 25979251
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||||||||||||||||||    
T  25979219 ctcctcctcaaggtctcaggttcgattctctct 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 650
Target Start/End: Complemental strand, 26078114 - 26078046
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || ||||| ||| |||||| ||||  ||| ||| ||||||||||||||||||||||||||    
T  26078114 tggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctct 26078046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 644
Target Start/End: Original strand, 16436631 - 16436692
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgatt 644  Q
    |||||||| || ||||||||| |||||| ||||  ||||||||||||||||||| ||||||||    
T  16436631 tggcctagtggtattggcttgggacttg-gagtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 16773855 - 16773889
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||| ||||||||||||||||||||||||    
T  16773855 gctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 34984854 - 34984888
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||| |||||||||||||||||    
T  34984854 gctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 37258394 - 37258360
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||| |||||||||||||||||||    
T  37258394 gctcctcctcaaggtttcaggttcgattctctctg 37258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 650
Target Start/End: Complemental strand, 17028315 - 17028259
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||| ||| |||||| ||||  ||||||||||||||||||||||| ||||| ||||    
T  17028315 attgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 17028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 653
Target Start/End: Original strand, 17155870 - 17155906
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctgct 653  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  17155870 gctcctcctcaaggtctcaggtttgattctctgtgct 17155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 582 - 650
Target Start/End: Original strand, 18437098 - 18437166
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || |||  |||| |||||||||||  |||||||||||| || || |||||||||||||||    
T  18437098 tggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctct 18437166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 651
Target Start/End: Original strand, 31074282 - 31074314
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||| |||||||||||||||||||||    
T  31074282 tcctcctcaagatctcaggttcgattctctctg 31074314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 599 - 639
Target Start/End: Complemental strand, 40461659 - 40461619
Alignment:
Q  599 cttgagacttgagagttcgctcctcctcaaggtctcaggtt 639  Q
    ||||||||||||||||  ||| |||||||||||||||||||    
T  40461659 cttgagacttgagagtgtgcttctcctcaaggtctcaggtt 40461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 582 - 648
Target Start/End: Complemental strand, 42327458 - 42327392
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    |||||||| || ||||||||| ||| || ||||  ||||||||||||||||||||||||||||||||    
T  42327458 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 13803520 - 13803577
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||  ||||  |||||||||||||||||||||||||||| ||||||    
T  13803520 attggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctg 13803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 37480100 - 37480153
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| ||| |||||||  |||||||||||||||||||||||||||||||    
T  37480100 attggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 648
Target Start/End: Complemental strand, 30808698 - 30808644
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    ||||||||||||| ||||| |  |||||||||||||||||||| |||||||||||    
T  30808698 attggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgattctct 30808644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 4060277 - 4060208
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||| |||| || |||||||  ||| ||||||||| |||||||||||||||||||||    
T  4060277 tggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctg 4060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 7600035 - 7599978
Alignment:
Q  591 ggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    |||||||||||||||||| |||||  |||||||||| |||| ||| ||||||||||||    
T  7600035 ggcattggcttgagacttaagagtgtgctcctcctcgaggtttcatgttcgattctct 7599978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 11251112 - 11251169
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| ||||||  |||  ||||||||||||||||||||||| |||||||||||    
T  11251112 attggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctg 11251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 19244134 - 19244191
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||| |||| ||| |||||||  |||||||| ||||||||||||||||||||||||||    
T  19244134 attgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 23052574 - 23052521
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |||||| ||||  ||| |||||||||||||||||||||||||||    
T  23052574 attggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 647
Target Start/End: Original strand, 29503284 - 29503349
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| || ||||| ||| ||| || ||||  |||||||||||||||||||||||||||||||    
T  29503284 tggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 649
Target Start/End: Complemental strand, 4262330 - 4262298
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||||||||||||||||||||||||||||    
T  4262330 gctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 40416418 - 40416384
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| |||||||||||||||||||||||||    
T  40416418 gctcctccttaaggtctcaggttcgattctctctg 40416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 42922427 - 42922497
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaa-ggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || ||||  |||||||||||| |||||||||||||||||||||||    
T  42922427 tggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctg 42922497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 12497810 - 12497777
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||||| |||||||||||||    
T  12497810 gctcctcctcaaggtctcagattcgattctctct 12497777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 12632743 - 12632796
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||| ||||||||||||||||  | |||| ||||||||||||||||| ||||||    
T  12632743 attgacttgagacttgagagtgggttccttctcaaggtctcaggttcaattctc 12632796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 19016056 - 19016109
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||| ||||  |||||||||| |||||||| ||| |||||||    
T  19016056 attggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 21195704 - 21195671
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||||||||||||| ||||    
T  21195704 gctcctcctcaaggtctcaggttcgattccctct 21195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 647
Target Start/End: Complemental strand, 40791537 - 40791488
Alignment:
Q  598 gcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||| ||||||||  |||||| |||||||||||| |||||||||||    
T  40791537 gcttgagatttgagagtgtgctccttctcaaggtctcaagttcgattctc 40791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 11062385 - 11062441
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||  ||||| ||||  ||| ||||||||||||||||||| ||||||||||    
T  11062385 attggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 595 - 647
Target Start/End: Complemental strand, 21939173 - 21939121
Alignment:
Q  595 ttggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||  |||||||||||  |||||||||| || |||||||||||||||||    
T  21939173 ttggctttggacttgagagtgtgctcctcctcgagatctcaggttcgattctc 21939121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 651
Target Start/End: Original strand, 40755644 - 40755676
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||| |||||||||||||||||    
T  40755644 tcctcctcaaggtcttaggttcgattctctctg 40755676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 2774 - 2705
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||| ||  |||||||| ||  ||||  |||||||||||||||||||||||||||||||||||    
T  2774 tggcctagcggtatatgcttgagaattaggagtctgctcctcctcaaggtctcaggttcgattctctctg 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 20025 - 19956
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || ||||  |||||||||||||||||||||||||||||||||||    
T  20025 tggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 25398 - 25341
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||| ||||  |||||| ||||||||||||||||||||| ||||||    
T  25398 attggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctg 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 41696 - 41627
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||||||  |||||||  |||||||||| ||||||||||||| ||||||||||    
T  41696 tggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctg 41627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 27093424 - 27093355
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  ||||| ||||  ||||||||||||||||||||||| |||||||||||    
T  27093424 tggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 582 - 644
Target Start/End: Original strand, 8170685 - 8170747
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgatt 644  Q
    |||||||| || |||||||||| ||||| ||||  |||||| |||||||||||||||||||||    
T  8170685 tggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatt 8170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 10445203 - 10445133
Alignment:
Q  582 tggcctagcggca-ttggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| |||| |||||||| ||| || ||||  |||||||||| ||||||||||||||||||||||||    
T  10445203 tggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 19154656 - 19154710
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctct 648  Q
    ||||||||||| | |||||||  ||||||||| ||||||||||||||||||||||    
T  19154656 attggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctct 19154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 16354955 - 16354886
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || ||||  ||||||||||| |||||||||||||||||||||||    
T  16354955 tggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 37788493 - 37788460
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||||||||||||||||||||||||||||    
T  37788493 gctcctcctcaaggtctcaggttcgattctctct 37788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 14186695 - 14186727
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||||||||||||||||||||||||||||    
T  14186695 gctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 650
Target Start/End: Complemental strand, 32651501 - 32651433
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || ||||||||| ||| || ||||  ||||||||||||| |||||| |||||||||||||    
T  32651501 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 21960576 - 21960631
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| ||| |||||||  |||||||||| ||||||||| ||||||||||||    
T  21960576 attggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 648
Target Start/End: Original strand, 30311354 - 30311385
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctct 648  Q
    ||||||||||||||||||||||||||||||||    
T  30311354 gctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 8796121 - 8796087
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||| |||||||||||||||    
T  8796121 gctcctcctcaaggtctcaagttcgattctctctg 8796087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 15048089 - 15048055
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||| ||||||    
T  15048089 gctcctcctcaaggtctcaggttcgattatctctg 15048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 28703432 - 28703398
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||| |||||||||||||||||||||||||||    
T  28703432 gctcctcttcaaggtctcaggttcgattctctctg 28703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 39253745 - 39253779
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||| |||||||||||||||||||||||||||    
T  39253745 gctcctcttcaaggtctcaggttcgattctctctg 39253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 53412993 - 53413027
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||| ||||||||||    
T  53412993 gctcctcctcaaggtctcaggttcaattctctctg 53413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Original strand, 54990750 - 54990780
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  54990750 gctcctcctcaaggtctcaggttcgattctc 54990780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Complemental strand, 3427581 - 3427548
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||||| |||||||||||||    
T  3427581 gctcctcctcaaggtctcagattcgattctctct 3427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 650
Target Start/End: Complemental strand, 8075175 - 8075122
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||| ||||  ||||||||||||||| ||||||||||||| ||||    
T  8075175 ggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctct 8075122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 14339635 - 14339688
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| || ||| ||||  |||||||||||| ||||||||||||||||||    
T  14339635 attggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 649
Target Start/End: Original strand, 20501735 - 20501776
Alignment:
Q  608 tgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||  ||||||||| |||||||||||||||||||||||    
T  20501735 tgagagtgtgctcctccttaaggtctcaggttcgattctctc 20501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 651
Target Start/End: Complemental strand, 34062575 - 34062542
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||| ||||||||||    
T  34062575 ctcctcctcaaggtctcaggttcaattctctctg 34062542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 651
Target Start/End: Complemental strand, 34622568 - 34622535
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||||| ||||||    
T  34622568 ctcctcctcaaggtctcaggttcgattttctctg 34622535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 2799875 - 2799944
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || || |||||||||  || ||||  |||||||||||||||||||||||||||||||||||    
T  2799875 tggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 10526848 - 10526905
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||| ||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  10526848 attggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 51814519 - 51814574
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||| |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  51814519 attgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 3265972 - 3266006
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  3265972 gctcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 617 - 651
Target Start/End: Complemental strand, 33700801 - 33700767
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||||||||||||||||||||||||||    
T  33700801 gctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 1247162 - 1247195
Alignment:
Q  618 ctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||||||||||||    
T  1247162 ctcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 6122822 - 6122875
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||| |||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  6122822 ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 6122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 8177245 - 8177176
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||  || ||||  ||||||||||||||| |||||||||||||||||||    
T  8177245 tggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 9165258 - 9165189
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| || ||||  |||||||||||| ||||||||||| ||||||||||    
T  9165258 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctg 9165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 17745319 - 17745250
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| |||| ||  |||||||||| |||||||| |||||||||||||||    
T  17745319 tggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctg 17745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 651
Target Start/End: Original strand, 36371483 - 36371552
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || ||||  ||||||||||||||||| |||||||||||||||||    
T  36371483 tggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 650
Target Start/End: Original strand, 42787221 - 42787289
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || |||| |||| ||||||||||| || |||||||||| ||||||| ||||| |||||||    
T  42787221 tggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattcgagtctctct 42787289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 650
Target Start/End: Original strand, 44961794 - 44961846
Alignment:
Q  598 gcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || |||||  ||||||||||| ||||||||||||||||||||||    
T  44961794 gcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctct 44961846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 647
Target Start/End: Original strand, 45266876 - 45266912
Alignment:
Q  611 gagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45266876 gagtttgctcctcctcaaggtctcaggttcgattctc 45266912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 648
Target Start/End: Complemental strand, 15786348 - 15786317
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctct 648  Q
    ||||||||||||||||||||||||||||||||    
T  15786348 gctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 651
Target Start/End: Original strand, 29753700 - 29753731
Alignment:
Q  620 cctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||||||||||||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctg 29753731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 4566596 - 4566630
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||| |||||||||||||||||||||||    
T  4566596 gctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 6650643 - 6650677
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||||| ||||||||||||||||||||||    
T  6650643 gctcctcctcaatgtctcaggttcgattctctctg 6650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 8904462 - 8904496
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||||||||||||| |||||||||||||||    
T  8904462 gctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Complemental strand, 19528355 - 19528325
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  19528355 gctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 604 - 646
Target Start/End: Complemental strand, 38947513 - 38947471
Alignment:
Q  604 gacttgagagttcgctcctcctcaaggtctcaggttcgattct 646  Q
    |||||| ||||  ||||||||||||||||||||||||||||||    
T  38947513 gacttgggagtgtgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 650
Target Start/End: Complemental strand, 14787396 - 14787331
Alignment:
Q  585 cctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||| || |||| |||||||| |||||||  | | ||||||||||| ||||||||||||||||||    
T  14787396 cctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctct 14787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 21547543 - 21547474
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| ||| || |||   |||||||||| |||| |||||||||||||||||||    
T  21547543 tggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctg 21547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 24047153 - 24047100
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||| ||||  |||||||||| |||| ||| |||||||||||    
T  24047153 attggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 31794327 - 31794258
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || ||||||||| |||||| ||||  |||||||||||||||||   ||||||||| |||||    
T  31794327 tggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctg 31794258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 52116832 - 52116779
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctc 647  Q
    ||||||||| |||||| ||||  |||||||||||| ||||||||||| ||||||    
T  52116832 attggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctc 52116779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 11063581 - 11063637
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    ||||||||| ||| ||| |||  | ||||||||||||||| ||||||||||||||||    
T  11063581 attggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 12587318 - 12587350
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    |||||||||| ||||||||||||||||||||||    
T  12587318 gctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 599 - 643
Target Start/End: Original strand, 21392867 - 21392911
Alignment:
Q  599 cttgagacttgagagttcgctcctcctcaaggtctcaggttcgat 643  Q
    |||| ||||| |||||  |||||||||||||||||||||||||||    
T  21392867 cttgggacttaagagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 646
Target Start/End: Original strand, 37400299 - 37400351
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattct 646  Q
    ||||||||||||| ||| |||  ||||||||| ||||||||| ||||||||||    
T  37400299 attggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 37400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 651
Target Start/End: Original strand, 40810517 - 40810549
Alignment:
Q  619 tcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||| |||||||||||||||||||||||||||    
T  40810517 tcctcttcaaggtctcaggttcgattctctctg 40810549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 51281399 - 51281431
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||||||||||||||||| |||||||||    
T  51281399 gctcctcctcaaggtctcaggtttgattctctc 51281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 594 - 649
Target Start/End: Complemental strand, 13097 - 13042
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||||||  || ||||  |||||||||||||||||||||||||||||||||    
T  13097 attggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 650
Target Start/End: Complemental strand, 12188366 - 12188298
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||| || ||||||||| ||| || ||||  ||||||||||||||| ||| ||||||||||||||    
T  12188366 tggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctct 12188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 645
Target Start/End: Complemental strand, 14199995 - 14199947
Alignment:
Q  597 ggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattc 645  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  14199995 ggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattc 14199947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 33549129 - 33549184
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| ||| || ||||  |||||||||| ||||||||||||||||||||||    
T  33549129 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 651
Target Start/End: Original strand, 3779355 - 3779421
Alignment:
Q  585 cctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||| || |||||||||||||||| ||||  |||||| ||||||||||||| ||| |||| |||||    
T  3779355 cctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctg 3779421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 13330135 - 13330168
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctct 650  Q
    |||||||||||||||||||| |||||||||||||    
T  13330135 gctcctcctcaaggtctcagattcgattctctct 13330168  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 14278162 - 14278105
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    ||||||||  ||| || |||| |||||||||| ||||||||||||| |||||||||||    
T  14278162 attggctttggacctgggagtgcgctcctccttaaggtctcaggtttgattctctctg 14278105  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 651
Target Start/End: Complemental strand, 15951349 - 15951296
Alignment:
Q  598 gcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| ||| ||||  ||||||||||||||||||| |||| ||||||||||    
T  15951349 gcttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctctg 15951296  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 6385910 - 6385942
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| |||||||||||||||||||||||    
T  6385910 gctcctccttaaggtctcaggttcgattctctc 6385942  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 645
Target Start/End: Complemental strand, 10338202 - 10338174
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattc 645  Q
    |||||||||||||||||||||||||||||    
T  10338202 gctcctcctcaaggtctcaggttcgattc 10338174  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 617 - 649
Target Start/End: Original strand, 28841462 - 28841494
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||||||||||||| |||||||||||||    
T  28841462 gctcctcctcaaggtctcaagttcgattctctc 28841494  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Complemental strand, 15374 - 15319
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctc 649  Q
    ||||||||| ||| || ||||  |||||||||| ||||||||||||||||||||||    
T  15374 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 651
Target Start/End: Original strand, 11576 - 11610
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||||| ||||||||||||||||||||||||    
T  11576 gctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 617 - 647
Target Start/End: Complemental strand, 2498 - 2468
Alignment:
Q  617 gctcctcctcaaggtctcaggttcgattctc 647  Q
    |||||||||||||||||||||||||||||||    
T  2498 gctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 643
Target Start/End: Complemental strand, 6982 - 6921
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgat 643  Q
    |||||||| || ||||||||| |||| | ||||  |||||||||||| ||||||||||||||    
T  6982 tggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat 6921  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 651
Target Start/End: Complemental strand, 95034 - 94965
Alignment:
Q  582 tggcctagcggcattggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattctctctg 651  Q
    |||||||| || |||||||||  || || ||||  |||||||||||||||||||||||| ||| ||||||    
T  95034 tggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctg 94965  T

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Target: scaffold0517 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 646
Target Start/End: Complemental strand, 7777 - 7725
Alignment:
Q  594 attggcttgagacttgagagttcgctcctcctcaaggtctcaggttcgattct 646  Q
    ||||||||||||| ||| |||  ||||||||| ||||||||| ||||||||||    
T  7777 attggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 7725  T

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