View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9167_low_1 (Length: 483)
Name: NF9167_low_1
Description: NF9167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9167_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 437; Significance: 0; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 1 - 466
Target Start/End: Complemental strand, 5886517 - 5886052
Alignment:
| Q |
1 |
acatttatgaattcgttaaatttactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccactta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5886517 |
acatttatgaattcgttaaattcactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccactta |
5886418 |
T |
|
| Q |
101 |
aatcattataagaaaggtctaggaaggtaaggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5886417 |
aatcattataagaaaggtctaggaaggtaaggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggag |
5886318 |
T |
|
| Q |
201 |
taagtttgtcatgttaccgatattgtttggaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcaggg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5886317 |
taagtttgtcatgttaccgatattgtttggaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcaggg |
5886218 |
T |
|
| Q |
301 |
nnnnnnncatggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaatttt |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5886217 |
aaaaaaacatggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaatttt |
5886118 |
T |
|
| Q |
401 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5886117 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
5886052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 466
Target Start/End: Complemental strand, 5895362 - 5894897
Alignment:
| Q |
1 |
acatttatgaattcgttaaatttactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccactta |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
5895362 |
acatttatgaattcgtcaaatttactaaactggttggatgcaagataaatctcctccaatgatgggagtgtaaaaaggtatgatggaattacaccactta |
5895263 |
T |
|
| Q |
101 |
aatcattataagaaaggtctaggaaggtaaggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggaa |
200 |
Q |
| |
|
||||||||| |||||||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || |
|
|
| T |
5895262 |
aatcattatgagaaaggtctagccatataagttgtgtgaggtttgacagtgaattgggaagtgttccatatagttgacagtaagaaagatccaattccaa |
5895163 |
T |
|
| Q |
201 |
taagtttgtcatgttaccgatattgtttggaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcaggg |
300 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| || |||||||||||||||||||| || | |||||||||||||| |||||||||||||||| || || |
|
|
| T |
5895162 |
taagtttgtcatgttaccgatgttgtgtggaagtggtccagagaagcttgtgttacgcaatataatgctatgaagagattcactaagtgagtagtctgga |
5895063 |
T |
|
| Q |
301 |
nnnnnnncatggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaatttt |
400 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||| || ||| |
|
|
| T |
5895062 |
aaaaaaacttggagattggggttgccagataagtcaataactgacagtgtcctaatttggaagatcttttgtggaaatgtaccgatcaatccacactttc |
5894963 |
T |
|
| Q |
401 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
5894962 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttctggcaatgaggatgaaaaattgt |
5894897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 466
Target Start/End: Complemental strand, 5848298 - 5847837
Alignment:
| Q |
1 |
acatttatgaattcgttaaatttactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccactta |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5848298 |
acatttatgaattcgtcaaatttactaaactggttggatgcaagagaaattctctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccatata |
5848199 |
T |
|
| Q |
101 |
aatcattataagaaaggtctaggaaggtaaggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggaa |
200 |
Q |
| |
|
||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
5848198 |
aatcattatgagaaaggcgtaggtcggtaaggtgtgtgaggtttgacagtgaattgggaaatgttccatatagttgacagtgagaaaggtccaataggaa |
5848099 |
T |
|
| Q |
201 |
taagtttgtcatgttaccgatattgtttggaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcaggg |
300 |
Q |
| |
|
|||||||||||||||||| ||| ||| |||| || |||| ||||| | ||||||| || | |||||||||||||| ||||||||||||||| || || |
|
|
| T |
5848098 |
taagtttgtcatgttaccaatagtgtgtggacgtgttccaaagaagatagtgttacgcaatataatgctatgaagagattcactaagtgagtggtctgga |
5847999 |
T |
|
| Q |
301 |
nnnnnnncatggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaatttt |
400 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| | ||||||| || ||| |
|
|
| T |
5847998 |
aaaaaaccatggaggttggggttgtcagataagtcaatagctgac----ttttaatttggaagatattttgtggaaatgtaccgatcaatccacactttc |
5847903 |
T |
|
| Q |
401 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5847902 |
gaagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaagttgt |
5847837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 232 - 466
Target Start/End: Original strand, 5605385 - 5605620
Alignment:
| Q |
232 |
aatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcagggnnnnnnnc-atggagattggggttgtcagat |
330 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| |||||| |||||||||||||||| || || | ||| || || |||||||||||| |
|
|
| T |
5605385 |
aatgctccagagaagcttgtgttactcgccataatgctgtgaagagattcactaagtgagtagtctggaaaaaaaaccatgaaggttagggttgtcagat |
5605484 |
T |
|
| Q |
331 |
aagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagattgagggtggttaggtttttaaaat |
430 |
Q |
| |
|
||||||||| |||||||||||||||||| || || |||||||||||||| | |||||||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
5605485 |
aagtcaatatctgacagtgttctaatttgaaatatattttgtggaaatgttccagtcaatccacaatcgttaagattgagggtggttaggtttttaaaat |
5605584 |
T |
|
| Q |
431 |
tggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5605585 |
tggcaaatgtttctggcactggggatgaaaaattgt |
5605620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 232 - 464
Target Start/End: Original strand, 5565068 - 5565300
Alignment:
| Q |
232 |
aatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcagggnnnnnnncatggagattggggttgtcagata |
331 |
Q |
| |
|
||||||||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||||| || ||| ||||||||||| ||| |||| |
|
|
| T |
5565068 |
aatgctccagagaagtttgtgtaactcactataatgctatgaagagattcacttagtgagtagtctgggaatgaaccatggagattgtagttaaatgata |
5565167 |
T |
|
| Q |
332 |
agtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagattgagggtggttaggtttttaaaatt |
431 |
Q |
| |
|
||||||||| |||| |||| ||| || || || ||||||||||||||| | ||||| || |||| | |||| |||||||||| |||||||||||||| |
|
|
| T |
5565168 |
agtcaataacagacaatgtttcaatctgaaaaatattttgtggaaatgtaccggtcaacccacaatctacaagactgagggtggtcaggtttttaaaatt |
5565267 |
T |
|
| Q |
432 |
ggcaaatgtttgtggcactggggatgaaaaatt |
464 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
5565268 |
ggcaaatgtttgtggcactggggatgaaaaatt |
5565300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 5613499 - 5613626
Alignment:
| Q |
6 |
tatgaattcgttaaatttactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccacttaaatca |
105 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||| ||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
5613499 |
tatgaattcgttaaatttactaaactggttagattcaagccaaatttcctccaatgatggaagtgtaaaaaggtatgaaggaattgcaccacttaaataa |
5613598 |
T |
|
| Q |
106 |
ttataagaaaggtctaggaaggtaaggt |
133 |
Q |
| |
|
||| |||||||||||||| || |||||| |
|
|
| T |
5613599 |
ttagaagaaaggtctaggtagttaaggt |
5613626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 463
Target Start/End: Complemental strand, 5570986 - 5570831
Alignment:
| Q |
308 |
catggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagatt |
407 |
Q |
| |
|
||||||||||| |||| ||||| ||||||| ||||| ||||| |||||| ||||| ||||||||||||||| |||||||||| ||| | |||| | |
|
|
| T |
5570986 |
catggagattgtagttgaatgataaatcaataaatgacaatgttccaatttgaaagatattttgtggaaatgtacctgtcaatccacaagatgaaagact |
5570887 |
T |
|
| Q |
408 |
gagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaat |
463 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| ||||||| ||||||| |||| |
|
|
| T |
5570886 |
gagggtggttagttttttaaaattggaaaatgtttctggcactagggatgagaaat |
5570831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 466
Target Start/End: Original strand, 3749121 - 3749454
Alignment:
| Q |
133 |
tgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaatagga-ataagtttgtcatgttaccgatattgtttgga |
231 |
Q |
| |
|
|||||||| ||||||| |||||| ||||||||||||| | |||||| ||||||| |||||| || | |||| ||| ||| ||| || ||| |||| || |
|
|
| T |
3749121 |
tgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaa-agtagataattttctcaggtttccaataatgttaggt |
3749219 |
T |
|
| Q |
232 |
aatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcagggnnnnnnncatggagattggggttgtcagata |
331 |
Q |
| |
|
||||||||| ||||| |||||||||| |||||||| | |||||| ||||||| | |||||| | || |||||||||| ||||| | | | |
|
|
| T |
3749220 |
aatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatggagatttttgttgttaaaca |
3749319 |
T |
|
| Q |
332 |
agtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagattgagggtggttaggtttttaaaatt |
431 |
Q |
| |
|
|||||||| |||||||||||| ||| || ||||| |||||||||||| | |||||| | ||| |||| |||||||||| | |||||||||||| |
|
|
| T |
3749320 |
agtcaatagttgacagtgttccaatctgaaagattgcatgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaatt |
3749419 |
T |
|
| Q |
432 |
ggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |
|
|
| T |
3749420 |
ggcaaatgttttcggcactggtgatgaaaaattgt |
3749454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 5553553 - 5553711
Alignment:
| Q |
308 |
catggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagatt |
407 |
Q |
| |
|
||||||||||| ||||| | ||||||||||| || ||| || |||||| ||||||||||||||||||||| |||| ||||| ||| | |||| | |
|
|
| T |
5553553 |
catggagattgttgttgtgtgctaagtcaataacggagagtttttcaatttgaaagatcttttgtggaaatgtacctgttaatccacaagatgtaagact |
5553652 |
T |
|
| Q |
408 |
gagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| ||| || ||||| |||||||||| |
|
|
| T |
5553653 |
aagggtggtcaggttttgaaaattggcaaatgtttctggaacgggggaagaaaaattgt |
5553711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 466
Target Start/End: Complemental strand, 5583193 - 5583035
Alignment:
| Q |
308 |
catggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagatt |
407 |
Q |
| |
|
||||||||||| |||| ||||||||||||| ||| | |||| |||||| ||||| ||| ||||||| || | |||||||| ||| | |||| | |
|
|
| T |
5583193 |
catggagattgtagttgaaggataagtcaataaatgagaacgttccaatttgaaagatggtttttggaaatttaccagtcaatccacaagatgcaagact |
5583094 |
T |
|
| Q |
408 |
gagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5583093 |
gagggtggttaattttttgaaattggaaaatgtttgtggcactggggatgaaaaattgt |
5583035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 466
Target Start/End: Complemental strand, 5852869 - 5852711
Alignment:
| Q |
308 |
catggagattggggttgtcagataagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagatt |
407 |
Q |
| |
|
||||||||||| ||||| | || |||||||| |||||||||| ||| || |||||||| |||||||||||| | |||||||| |||| | |||| | |
|
|
| T |
5852869 |
catggagattgctgttgtatgttatgtcaataacagacagtgttccaatctgaaagatcttctgtggaaatgtaccagtcaatccacaatctgaaagact |
5852770 |
T |
|
| Q |
408 |
gagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaaattgt |
466 |
Q |
| |
|
|||||||| ||||||| |||||| |||||||||| ||| || ||||| |||||||||| |
|
|
| T |
5852769 |
aagggtggtcaggttttgaaaattagcaaatgtttctggaacgggggaagaaaaattgt |
5852711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 5559375 - 5559436
Alignment:
| Q |
330 |
taagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatc |
391 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
5559375 |
taagtcaataaatgacaatgttccaatttggaagatcttatgtggaaatgtatcagtcaatc |
5559436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 463
Target Start/End: Original strand, 5858230 - 5858563
Alignment:
| Q |
130 |
aggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggaataagtttgtcatgttaccgatattgtttg |
229 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| ||||||| | |||||| ||||||| ||||||| |||| | ||| ||| || ||| | | | |
|
|
| T |
5858230 |
aggtgtgtgaggtttgacaatgaatttggaagggttccattaaattgacaaaaagaaagatccaattcagataactgcctcaagttgccaatagagctag |
5858329 |
T |
|
| Q |
230 |
gaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcagggnnnnnnncatggagattggggttgtcaga |
329 |
Q |
| |
|
| |||| |||||||||| |||||| |||||||||||| ||||||||| ||||||| |||||||| | || || ||||||| |||| | | |
|
|
| T |
5858330 |
gtaatggtccagagaagtttgtgtcactcactctaattctatgaagagattcacttagtgagtagtttggaaatgaaccacggagattttcgttggaaaa |
5858429 |
T |
|
| Q |
330 |
taagtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagattgagggtggttaggtttttaaaa |
429 |
Q |
| |
|
||||||||| | |||| ||||| ||| || |||||||| |||||||||||| | | ||| | ||| | |||| ||||||| || | |||||||||| |
|
|
| T |
5858430 |
taagtcaatcacagacaatgttccaatctgaaagatcttctgtggaaatgtaccggataatgcacaaaatgcaagactgagggtagtcaagtttttaaaa |
5858529 |
T |
|
| Q |
430 |
ttggcaaatgtttgtggcactggggatgaaaaat |
463 |
Q |
| |
|
|| |||||||||| || |||||||||||||||| |
|
|
| T |
5858530 |
tttgcaaatgtttcaggaactggggatgaaaaat |
5858563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 5583291 - 5583247
Alignment:
| Q |
210 |
catgttaccgatattgtttggaaatgctccagagaagcttgtgtt |
254 |
Q |
| |
|
||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
5583291 |
catgttaccaatagagtatggaaatgctccagagaagcttgtgtt |
5583247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 1483092 - 1483384
Alignment:
| Q |
1 |
acatttatgaattcgttaaatttactaaaatggttggattcaagacaaatcttctccaatgatgggagtgtaaaaaggtatgaaggaattgaaccactta |
100 |
Q |
| |
|
|||||||||||||| | || |||| |||| | |||| || |||| |||||||||| | ||||||||||||||||||| |||||||||| ||||| || |
|
|
| T |
1483092 |
acatttatgaattcatcaagtttaataaacttgttgaatgcaagcaaaatcttctctattgatgggagtgtaaaaagggatgaaggaatgacaccacgta |
1483191 |
T |
|
| Q |
101 |
aatcattataagaaaggtctaggaaggtaaggtgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggaa |
200 |
Q |
| |
|
||| || | ||||||||||||| | |||||||||||||| || |||| |||||||||||||||||||| | ||||||| ||| || ||||||| | |
|
|
| T |
1483192 |
aattgttttgagaaaggtctaggtatgtaaggtgtgtgaggttggacattgaattgggaagtgttccattaaattgacagtaaggaagatccaattcaga |
1483291 |
T |
|
| Q |
201 |
taagtttgtcatgttaccgatattgtttggaaatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagta |
293 |
Q |
| |
|
||||| ||| || || ||| |||||| ||| |||| || || ||||||| ||| |||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
1483292 |
taagtacctcaatttgccaatagagtttggtaattctcctgataaacttgtgtaactaactctaattctacgaagagattcactaagtgagta |
1483384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University