View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9169_high_5 (Length: 547)
Name: NF9169_high_5
Description: NF9169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9169_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 16 - 525
Target Start/End: Complemental strand, 33309390 - 33308881
Alignment:
| Q |
16 |
ttctaaccctttcatttcattattatttcttcgctaatagttgtaatgattcattttttaaactcctgaagatttgagtatcctttacatttttcatact |
115 |
Q |
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| T |
33309390 |
ttctaaccctttcatttcattattatttcttcgctaatagttgtaatgactcattttttaaactcctgaagatttgattatcctttacatttttcatact |
33309291 |
T |
|
| Q |
116 |
atattttatgtatatgaaaaacattacctaatctttgtgattgttttgctagactggttttttaataggtccatctgctttgggaaaatggaataatgta |
215 |
Q |
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| T |
33309290 |
atattttatgtatatgaaaaacattacctaatctttgtgattgttttgctagactggttttttaataggtccatctgctttgggaaaatggaataatgta |
33309191 |
T |
|
| Q |
216 |
ttcaaaagcatattcccttatagtaatatgttaccattagagacagtgggagcattaacacttgtttactatgtgttcttggttggcttagaagtagact |
315 |
Q |
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| T |
33309190 |
ttcaaaagcatattcccttacagcaatatgttaccattagagacagtgggagcattaacacttgtttactatgtgttcttggttggcttagaagtagact |
33309091 |
T |
|
| Q |
316 |
tgaaatcaattacaaggttttactacaataagaaagcaatggttgttgcaattgctggtgtaggcttcactttaccagttggtgctggcttatactacct |
415 |
Q |
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||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33309090 |
tgaaaccaatcacaaggttttactacaataagaaagcaatggttgttgcaattgctggtgtaggcttcactttaccagttggtgctggcttatactacct |
33308991 |
T |
|
| Q |
416 |
tcttgtaaccgacatgggtcagaaatcgttgccacattcagatagtgacaaacacatgagaggtgcaatattttggggaatgacactttcttgcagtagt |
515 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33308990 |
tcttgtaaccgacatgggtcataaatcgttgccacattcagatagtgacaaacacatgagaggtgcaatattttggggaatgacactttcttgcagtagt |
33308891 |
T |
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| Q |
516 |
gagttccctg |
525 |
Q |
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| T |
33308890 |
gagttccctg |
33308881 |
T |
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