View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9169_low_60 (Length: 247)
Name: NF9169_low_60
Description: NF9169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9169_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 35939839 - 35940067
Alignment:
| Q |
1 |
acacaaggaaagaattgggtcgtcgctaacatccatagcgatttgcggttcgtcattgcatcgtaaatcaaaccagcaaacacgaccatcctatttgata |
100 |
Q |
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| T |
35939839 |
acacaaggaaagaattgggtcgtcgctaacatccatagcgatctgcggttcgtcattgcatcgtaaatcaaaccagcaaacacgaccatcctatttgata |
35939938 |
T |
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| Q |
101 |
tagagaatgaaattgatatgaaaggaagcaatgatgaaggataataaaccctaattaagagataatggaagtgacctcgccggaagtgacgatgatgcga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35939939 |
tagagaatgaaattgatatgaaaggaagcaatgatgaaggataataaaccctaattaagagataatggaagtgacctcgccggaagtgacgatgatgcga |
35940038 |
T |
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| Q |
201 |
gggttttgaggagaggcagtgcagcaatt |
229 |
Q |
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|||||||||||||||||| |||||||||| |
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| T |
35940039 |
gggttttgaggagaggcaatgcagcaatt |
35940067 |
T |
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