View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9170_high_10 (Length: 255)

Name: NF9170_high_10
Description: NF9170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9170_high_10
NF9170_high_10
[»] chr7 (43 HSPs)
chr7 (1-255)||(9625196-9625444)
chr7 (194-255)||(21055006-21055067)
chr7 (189-255)||(3519778-3519844)
chr7 (199-252)||(32278941-32278994)
chr7 (203-255)||(3520093-3520145)
chr7 (185-255)||(4267815-4267885)
chr7 (189-255)||(6001488-6001554)
chr7 (189-255)||(26239969-26240035)
chr7 (189-254)||(2404228-2404293)
chr7 (194-247)||(3392952-3393005)
chr7 (194-255)||(9689143-9689204)
chr7 (189-254)||(43688213-43688278)
chr7 (194-255)||(47710413-47710474)
chr7 (194-255)||(47722069-47722130)
chr7 (194-230)||(33834396-33834432)
chr7 (189-255)||(48243114-48243178)
chr7 (194-252)||(2544271-2544329)
chr7 (189-255)||(29469805-29469871)
chr7 (189-255)||(31485477-31485543)
chr7 (194-255)||(29469575-29469636)
chr7 (198-255)||(31892125-31892182)
chr7 (194-255)||(33996132-33996193)
chr7 (194-255)||(42985176-42985237)
chr7 (194-255)||(48243490-48243551)
chr7 (194-255)||(48661608-48661669)
chr7 (194-254)||(31257321-31257381)
chr7 (189-255)||(1596793-1596859)
chr7 (194-244)||(9688934-9688984)
chr7 (189-255)||(21861494-21861560)
chr7 (205-255)||(30646629-30646679)
chr7 (194-252)||(33996367-33996425)
chr7 (189-255)||(34027358-34027424)
chr7 (194-255)||(1596564-1596625)
chr7 (194-255)||(2404461-2404522)
chr7 (194-255)||(2544500-2544561)
chr7 (194-255)||(3038137-3038198)
chr7 (194-255)||(6634825-6634886)
chr7 (194-255)||(21861264-21861325)
chr7 (194-243)||(41190984-41191033)
chr7 (194-255)||(44874399-44874460)
chr7 (188-244)||(2315334-2315390)
chr7 (194-246)||(18826550-18826602)
chr7 (195-243)||(36993368-36993416)
[»] chr4 (42 HSPs)
chr4 (1-255)||(13611802-13612050)
chr4 (189-255)||(31254460-31254526)
chr4 (194-255)||(35645818-35645879)
chr4 (189-255)||(28245579-28245645)
chr4 (189-255)||(50543383-50543449)
chr4 (194-255)||(50543620-50543681)
chr4 (189-240)||(6778511-6778562)
chr4 (194-252)||(9279197-9279255)
chr4 (189-255)||(22231126-22231192)
chr4 (189-255)||(39902616-39902682)
chr4 (194-255)||(11036799-11036860)
chr4 (194-255)||(13555520-13555581)
chr4 (194-255)||(27634134-27634195)
chr4 (194-246)||(17111738-17111790)
chr4 (195-255)||(22827509-22827569)
chr4 (189-255)||(21498760-21498826)
chr4 (189-255)||(53828342-53828408)
chr4 (194-255)||(5846116-5846177)
chr4 (194-255)||(11103949-11104010)
chr4 (194-255)||(21498324-21498385)
chr4 (194-255)||(27634569-27634630)
chr4 (194-255)||(35788629-35788690)
chr4 (194-255)||(35788864-35788925)
chr4 (194-255)||(37836050-37836111)
chr4 (195-255)||(44118912-44118972)
chr4 (189-255)||(5846344-5846410)
chr4 (194-244)||(13555311-13555361)
chr4 (194-244)||(45784942-45784992)
chr4 (194-240)||(46660977-46661023)
chr4 (194-255)||(400618-400679)
chr4 (198-255)||(2261806-2261863)
chr4 (195-252)||(6218175-6218232)
chr4 (194-255)||(9685602-9685663)
chr4 (194-251)||(20821943-20822000)
chr4 (194-255)||(22231361-22231422)
chr4 (194-255)||(22863444-22863505)
chr4 (194-255)||(35797030-35797091)
chr4 (194-255)||(35819181-35819242)
chr4 (194-255)||(53814982-53815043)
chr4 (194-255)||(53828576-53828637)
chr4 (189-229)||(24974307-24974347)
chr4 (195-255)||(53698998-53699058)
[»] chr6 (40 HSPs)
chr6 (194-252)||(24554087-24554145)
chr6 (189-247)||(33494739-33494797)
chr6 (194-252)||(3680216-3680274)
chr6 (194-255)||(8567012-8567072)
chr6 (194-255)||(25065147-25065208)
chr6 (194-255)||(30256783-30256843)
chr6 (189-255)||(6054368-6054434)
chr6 (194-252)||(12199861-12199919)
chr6 (189-255)||(17147713-17147779)
chr6 (194-255)||(12330344-12330404)
chr6 (189-254)||(31961143-31961208)
chr6 (194-255)||(33494509-33494570)
chr6 (196-255)||(2736220-2736279)
chr6 (189-255)||(4868630-4868696)
chr6 (194-252)||(6542999-6543057)
chr6 (189-255)||(27772911-27772977)
chr6 (194-255)||(2753228-2753289)
chr6 (194-255)||(6237755-6237816)
chr6 (194-255)||(6369434-6369495)
chr6 (189-246)||(6542770-6542827)
chr6 (194-255)||(13353171-13353232)
chr6 (189-254)||(15081962-15082027)
chr6 (194-255)||(15600906-15600967)
chr6 (194-255)||(33796296-33796357)
chr6 (189-255)||(9705219-9705285)
chr6 (194-255)||(30505707-30505769)
chr6 (205-255)||(33631857-33631907)
chr6 (194-255)||(4868866-4868927)
chr6 (194-255)||(6400899-6400960)
chr6 (198-255)||(12330232-12330289)
chr6 (194-255)||(13740886-13740947)
chr6 (194-255)||(13746386-13746447)
chr6 (194-255)||(19639166-19639227)
chr6 (194-255)||(21690692-21690753)
chr6 (194-255)||(27653187-27653248)
chr6 (194-255)||(27656428-27656489)
chr6 (194-255)||(27772684-27772745)
chr6 (194-255)||(28868010-28868071)
chr6 (197-245)||(16722870-16722918)
chr6 (195-243)||(30656462-30656510)
[»] chr3 (35 HSPs)
chr3 (194-255)||(38791503-38791564)
chr3 (194-255)||(35038481-35038542)
chr3 (194-246)||(34992520-34992572)
chr3 (194-253)||(21809202-21809261)
chr3 (189-255)||(35038247-35038313)
chr3 (196-255)||(22729072-22729131)
chr3 (189-255)||(20327667-20327733)
chr3 (189-229)||(34992806-34992846)
chr3 (189-255)||(4155524-4155590)
chr3 (189-255)||(9273160-9273226)
chr3 (189-255)||(20303117-20303183)
chr3 (194-255)||(20327902-20327963)
chr3 (189-246)||(39620291-39620348)
chr3 (194-255)||(54368692-54368753)
chr3 (194-246)||(4008655-4008707)
chr3 (194-242)||(19954284-19954332)
chr3 (199-255)||(45138855-45138911)
chr3 (189-255)||(23691245-23691311)
chr3 (189-255)||(23708045-23708111)
chr3 (189-255)||(23708277-23708343)
chr3 (189-255)||(23726501-23726567)
chr3 (189-255)||(23726733-23726799)
chr3 (189-255)||(23744957-23745023)
chr3 (189-255)||(23745189-23745255)
chr3 (189-255)||(24063482-24063548)
chr3 (194-255)||(11589755-11589816)
chr3 (194-255)||(14839790-14839851)
chr3 (194-255)||(16239561-16239622)
chr3 (194-255)||(16927002-16927063)
chr3 (206-255)||(30138046-30138095)
chr3 (206-255)||(30147597-30147646)
chr3 (194-255)||(39269301-39269362)
chr3 (194-255)||(54368486-54368547)
chr3 (194-230)||(27086557-27086593)
chr3 (188-240)||(39683336-39683388)
[»] chr1 (49 HSPs)
chr1 (190-254)||(2859446-2859510)
chr1 (194-252)||(25713363-25713421)
chr1 (189-255)||(38733347-38733413)
chr1 (194-255)||(39808436-39808497)
chr1 (195-255)||(17468315-17468375)
chr1 (189-255)||(8870742-8870808)
chr1 (189-255)||(25145538-25145604)
chr1 (189-255)||(51459883-51459949)
chr1 (194-255)||(20208579-20208640)
chr1 (189-254)||(35772229-35772294)
chr1 (194-246)||(11924891-11924943)
chr1 (189-252)||(38668325-38668388)
chr1 (189-255)||(27413547-27413613)
chr1 (189-255)||(52961547-52961613)
chr1 (194-255)||(2859680-2859741)
chr1 (194-255)||(25145773-25145834)
chr1 (194-254)||(28408096-28408156)
chr1 (195-254)||(7826085-7826144)
chr1 (189-252)||(16163132-16163195)
chr1 (197-252)||(17402555-17402610)
chr1 (194-253)||(17412306-17412365)
chr1 (194-252)||(3169736-3169794)
chr1 (194-252)||(17452884-17452942)
chr1 (189-251)||(35892256-35892318)
chr1 (189-243)||(51460147-51460201)
chr1 (189-255)||(51589191-51589257)
chr1 (197-255)||(52650824-52650882)
chr1 (194-255)||(15986386-15986447)
chr1 (194-255)||(16162903-16162964)
chr1 (194-251)||(26173513-26173570)
chr1 (194-255)||(30369805-30369866)
chr1 (194-251)||(35303497-35303554)
chr1 (194-255)||(51588962-51589023)
chr1 (195-255)||(21626392-21626452)
chr1 (195-255)||(39348172-39348232)
chr1 (194-246)||(43409777-43409829)
chr1 (189-253)||(51459760-51459824)
chr1 (194-241)||(33156939-33156986)
chr1 (194-245)||(38733122-38733173)
chr1 (196-255)||(40079124-40079183)
chr1 (194-240)||(26603398-26603444)
chr1 (194-255)||(369605-369666)
chr1 (194-255)||(855951-856012)
chr1 (189-246)||(4112833-4112890)
chr1 (198-255)||(4113059-4113116)
chr1 (199-252)||(9499221-9499274)
chr1 (198-255)||(17452732-17452789)
chr1 (194-255)||(38080575-38080635)
chr1 (194-255)||(41035880-41035941)
[»] chr5 (40 HSPs)
chr5 (197-255)||(15480295-15480353)
chr5 (189-255)||(20510695-20510761)
chr5 (189-252)||(33337294-33337357)
chr5 (189-255)||(95319-95385)
chr5 (189-255)||(18333518-18333584)
chr5 (194-255)||(2063786-2063847)
chr5 (195-255)||(1564620-1564680)
chr5 (194-245)||(37656585-37656636)
chr5 (189-255)||(17150286-17150352)
chr5 (189-255)||(24346554-24346620)
chr5 (206-252)||(37782106-37782152)
chr5 (189-255)||(41666810-41666876)
chr5 (189-246)||(8081176-8081233)
chr5 (194-251)||(9368800-9368857)
chr5 (189-246)||(19522286-19522343)
chr5 (194-251)||(21209978-21210035)
chr5 (198-255)||(21306861-21306918)
chr5 (198-255)||(21314699-21314756)
chr5 (189-246)||(24269932-24269989)
chr5 (194-255)||(24647666-24647727)
chr5 (194-255)||(41667046-41667107)
chr5 (189-255)||(4481616-4481682)
chr5 (189-255)||(13296857-13296923)
chr5 (195-253)||(15439194-15439252)
chr5 (189-255)||(29909540-29909606)
chr5 (189-255)||(30770102-30770168)
chr5 (194-252)||(31181067-31181125)
chr5 (206-244)||(37781709-37781747)
chr5 (194-255)||(6413710-6413770)
chr5 (194-255)||(8098288-8098348)
chr5 (189-246)||(11895977-11896034)
chr5 (194-251)||(13701125-13701182)
chr5 (194-255)||(19705873-19705934)
chr5 (194-255)||(24487698-24487759)
chr5 (198-255)||(30758352-30758409)
chr5 (209-246)||(37656999-37657036)
chr5 (203-255)||(15438856-15438908)
chr5 (194-246)||(24346799-24346851)
chr5 (194-246)||(29239884-29239935)
chr5 (194-230)||(33337529-33337565)
[»] chr8 (50 HSPs)
chr8 (194-255)||(39052982-39053043)
chr8 (189-255)||(39052590-39052656)
chr8 (194-246)||(3157622-3157674)
chr8 (196-255)||(5590421-5590480)
chr8 (194-252)||(24532477-24532535)
chr8 (189-255)||(28069410-28069476)
chr8 (194-255)||(11232482-11232543)
chr8 (194-255)||(12317016-12317077)
chr8 (194-255)||(31197817-31197878)
chr8 (194-246)||(12547069-12547121)
chr8 (195-255)||(29907779-29907839)
chr8 (189-255)||(422270-422336)
chr8 (189-255)||(11232247-11232313)
chr8 (189-255)||(16050226-16050292)
chr8 (189-255)||(17477030-17477096)
chr8 (189-255)||(19256639-19256705)
chr8 (198-255)||(8084101-8084158)
chr8 (189-254)||(12688272-12688337)
chr8 (194-255)||(17469788-17469849)
chr8 (194-255)||(18004149-18004210)
chr8 (194-255)||(19256873-19256934)
chr8 (194-255)||(36917492-36917553)
chr8 (189-230)||(39052772-39052813)
chr8 (202-255)||(41790637-41790690)
chr8 (195-251)||(5675791-5675847)
chr8 (195-255)||(5940029-5940089)
chr8 (194-254)||(20094614-20094674)
chr8 (194-242)||(31197585-31197633)
chr8 (195-255)||(34236701-34236761)
chr8 (194-246)||(39960161-39960213)
chr8 (189-252)||(15042726-15042789)
chr8 (189-255)||(5932002-5932068)
chr8 (195-249)||(28213380-28213434)
chr8 (189-255)||(34843082-34843148)
chr8 (189-255)||(39743494-39743560)
chr8 (198-255)||(5932237-5932294)
chr8 (194-255)||(10449970-10450031)
chr8 (194-255)||(24075359-24075420)
chr8 (194-255)||(25325616-25325677)
chr8 (194-255)||(34842648-34842709)
chr8 (194-255)||(35682834-35682895)
chr8 (194-255)||(39984784-39984845)
chr8 (195-255)||(4828039-4828099)
chr8 (195-255)||(4828264-4828324)
chr8 (194-230)||(4873535-4873571)
chr8 (195-255)||(7729912-7729972)
chr8 (203-255)||(29005843-29005895)
chr8 (194-246)||(35385874-35385926)
chr8 (195-255)||(37001435-37001495)
chr8 (195-255)||(38447480-38447540)
[»] chr2 (38 HSPs)
chr2 (194-255)||(17719370-17719431)
chr2 (189-255)||(16419467-16419533)
chr2 (189-255)||(37812321-37812387)
chr2 (189-255)||(40379262-40379328)
chr2 (194-255)||(94073-94134)
chr2 (194-255)||(40379497-40379558)
chr2 (187-255)||(2324203-2324271)
chr2 (189-253)||(15124603-15124667)
chr2 (189-255)||(16533512-16533578)
chr2 (194-255)||(4662201-4662262)
chr2 (194-255)||(12343803-12343864)
chr2 (195-252)||(44404214-44404271)
chr2 (189-255)||(93176-93241)
chr2 (189-255)||(5711492-5711558)
chr2 (189-255)||(33606107-33606173)
chr2 (194-255)||(17525391-17525452)
chr2 (194-255)||(32884077-32884138)
chr2 (194-246)||(13486303-13486355)
chr2 (196-252)||(18607065-18607121)
chr2 (189-253)||(27036467-27036531)
chr2 (189-252)||(5711731-5711794)
chr2 (181-255)||(2029726-2029800)
chr2 (189-255)||(2324439-2324505)
chr2 (194-255)||(5851735-5851799)
chr2 (198-252)||(8424862-8424916)
chr2 (189-243)||(31700813-31700867)
chr2 (194-252)||(37769999-37770057)
chr2 (194-255)||(5509049-5509110)
chr2 (189-230)||(12343687-12343728)
chr2 (194-255)||(14466463-14466524)
chr2 (189-254)||(15518725-15518790)
chr2 (194-255)||(19191663-19191724)
chr2 (189-242)||(24396065-24396118)
chr2 (189-246)||(27897667-27897724)
chr2 (194-255)||(37812551-37812612)
chr2 (195-255)||(10523224-10523284)
chr2 (195-255)||(14927073-14927133)
chr2 (194-246)||(21591751-21591803)
[»] scaffold0129 (2 HSPs)
scaffold0129 (194-246)||(14508-14560)
scaffold0129 (201-252)||(14280-14331)
[»] scaffold0001 (1 HSPs)
scaffold0001 (194-246)||(429843-429895)
[»] scaffold0729 (1 HSPs)
scaffold0729 (189-240)||(2694-2745)
[»] scaffold0519 (2 HSPs)
scaffold0519 (194-255)||(1886-1947)
scaffold0519 (189-255)||(2116-2182)
[»] scaffold0047 (2 HSPs)
scaffold0047 (194-255)||(12617-12678)
scaffold0047 (189-255)||(12846-12912)
[»] scaffold0005 (1 HSPs)
scaffold0005 (195-239)||(288726-288770)
[»] scaffold0766 (1 HSPs)
scaffold0766 (189-255)||(6239-6305)
[»] scaffold0692 (1 HSPs)
scaffold0692 (194-255)||(5807-5868)
[»] scaffold0459 (1 HSPs)
scaffold0459 (195-252)||(13072-13129)
[»] scaffold0366 (2 HSPs)
scaffold0366 (195-252)||(10713-10770)
scaffold0366 (195-252)||(14379-14436)
[»] scaffold0048 (1 HSPs)
scaffold0048 (194-251)||(81812-81869)
[»] scaffold0400 (1 HSPs)
scaffold0400 (194-246)||(3814-3866)
[»] scaffold0365 (1 HSPs)
scaffold0365 (194-246)||(4458-4510)
[»] scaffold0092 (1 HSPs)
scaffold0092 (189-255)||(5855-5921)
[»] scaffold0060 (1 HSPs)
scaffold0060 (194-255)||(20545-20606)
[»] scaffold0050 (1 HSPs)
scaffold0050 (194-255)||(69586-69647)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 9625196 - 9625444
Alignment:
Q  1 ataatgagaaaaatttcagctagataatcggcatagaacgctacgccaattgaattcagagtgttaagagatcaaatactctgccaatcccttttgggat 100  Q
    ||||||||||||| |||||||||| || || |||| ||||| ||||||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||    
T  9625196 ataatgagaaaaacttcagctagagaaccgacatacaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagccctttttggat 9625295  T
Q  101 cctgttagagtgggtgtttctgtgctcctgttaagtactgagtgctatctgtttaaattgatctatatttcagtcttgcttgtaattctgtgataagagt 200  Q
    ||||||||  || ||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9625296 cctgttag--tgagtgtttctgtgctc----taagtactgagtgctatttgtttaaattgatctatatttcagtcttgcctgtaattctgtgataagagt 9625389  T
Q  201 cccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
     |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  9625390 tccacattggataggtgatggtctgacaatatatttataagtggggataatcctc 9625444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 21055067 - 21055006
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  21055067 taagagtcccatatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctc 21055006  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 3519844 - 3519778
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||||| |||||||| | |||||||||||||  |||||||    
T  3519844 tgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggtaatcctc 3519778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 32278994 - 32278941
Alignment:
Q  199 gtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  32278994 gtcccacatcggatatgtgatggtctgacaatgtgtttataagtggggacaatc 32278941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 3520145 - 3520093
Alignment:
Q  203 cacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  3520145 cacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcctc 3520093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 4267815 - 4267885
Alignment:
Q  185 attctgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||| ||||||||||||||||| |||| | |||||||||||| | ||||||||||||| ||||||||    
T  4267815 attcagtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctc 4267885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 6001554 - 6001488
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||  ||||  |||||||||| ||||||||||||| ||||||||    
T  6001554 tgtgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaatcctc 6001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 26240035 - 26239969
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||| ||||||||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  26240035 tgtgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctc 26239969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 2404293 - 2404228
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| ||||||||||||||||| |||| ||||| |||||||| | ||||||||||||| |||||||    
T  2404293 tgtgttaagagtcccacatcggttaggagatggactgacaatgtgtttataagtgggggcaatcct 2404228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 3392952 - 3393005
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggga 247  Q
    |||||||| ||||||||||||||||||| |||||||| | ||||||||||||||    
T  3392952 taagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggga 3393005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 9689204 - 9689143
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||||||||| ||||||| |  ||||||||||||  |||||||    
T  9689204 taagagtcccacatcggataggtgatggtttgacaatgtgcttataagtgggggaaatcctc 9689143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 43688278 - 43688213
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | ||||||||||||| |||||||    
T  43688278 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcct 43688213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 47710413 - 47710474
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||||||||||| || ||||| | ||||||||||||| ||||||||    
T  47710413 taagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctc 47710474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 47722069 - 47722130
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||||||||||| || ||||| | ||||||||||||| ||||||||    
T  47722069 taagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctc 47722130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 33834396 - 33834432
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaat 230  Q
    |||||||||||||||||||||||||||||||||||||    
T  33834396 taagagtcccacatcggataggtgatggtctgacaat 33834432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 48243178 - 48243114
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| ||||  ||||||||||||||| | ||||||||||||| ||||||||    
T  48243178 tgtgttaagagtcccacatcagata--tgatggtctgacaatgtgtttataagtgggggcaatcctc 48243114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 2544329 - 2544271
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||| |||| | |||||||||||| | ||||||||||||| |||||    
T  2544329 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatc 2544271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 29469805 - 29469871
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  29469805 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 29469871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 31485543 - 31485477
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||  |||| ||||||| |||||||| | ||||||||||||| ||||||||    
T  31485543 tgtgttaagagtcccacataagatatgtgatggcctgacaatgtgtttataagtgggggcaatcctc 31485477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 29469575 - 29469636
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  29469575 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 29469636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 31892125 - 31892182
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||  || |  ||||||| ||||||||||||||||||||||||    
T  31892125 agtcccacatcggataggatatagcatgacaatgtatttataagtggggacaatcctc 31892182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 33996193 - 33996132
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| |  || |||||||||| | |||||| |||||||||||||||    
T  33996193 taagagtcccacatcggataagacattgtctgacaatgtgtttatacgtggggacaatcctc 33996132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 42985237 - 42985176
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||| |||||||| ||||||| | ||||||||||| | ||||||||    
T  42985237 taagagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcctc 42985176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 48243551 - 48243490
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| | ||| ||||||| |||||||| | ||||||||||||| ||||||||    
T  48243551 taagagtcccacattgaatatgtgatggcctgacaatgtgtttataagtgggggcaatcctc 48243490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 48661669 - 48661608
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| |||||| ||||  |||||||| |||||||| |||||| ||||||||    
T  48661669 taagagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcctc 48661608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 31257381 - 31257321
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| ||| |||||||| |||| | |||||||||||| ||||||||||||||| |||||||    
T  31257381 taagcgtctcacatcggttaggagttggtctgacaatttatttataagtgggggcaatcct 31257321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 1596793 - 1596859
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| || ||||| | ||||||||||||| ||||||||    
T  1596793 tgtgttaagagtcccacatcggacaggacatggcctaacaatgtttttataagtgggggcaatcctc 1596859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 9688984 - 9688934
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgg 244  Q
    ||||||| ||||||||||||| ||||||||||||| | ||||||| |||||    
T  9688984 taagagttccacatcggatagatgatggtctgacactgtatttatgagtgg 9688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 21861494 - 21861560
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||| |||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  21861494 tgtgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 21861560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 30646679 - 30646629
Alignment:
Q  205 catcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||| |||| |||| | |||||| |||||||||||||||||||||||||    
T  30646679 catcgggtaggagatgatatgacaacatatttataagtggggacaatcctc 30646629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 33996425 - 33996367
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||||||||  |||| || | ||| ||||||||||||||| |||||    
T  33996425 taagagtcccacatcggataggacatggcctaataatgtatttataagtgggggcaatc 33996367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 34027358 - 34027424
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||| ||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  34027358 tgtgttaagaatcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 34027424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 1596564 - 1596625
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | || |||||||||| ||||||||    
T  1596564 taagagtcccacatcggacaggacatggcctgacaatgtgttaataagtgggggcaatcctc 1596625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 2404522 - 2404461
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||| ||||||||| || || |||||||| | ||||||||| ||| ||||||||    
T  2404522 taagagtcccacgtcggataggagacggactgacaatgtgtttataagtaggggcaatcctc 2404461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 2544561 - 2544500
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||| |||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  2544561 taagagtcccacgtcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 2544500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 3038198 - 3038137
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| ||| | ||| |||| ||||| | ||||||||||||| ||||||||    
T  3038198 taagagtcccacatcgaataagagattgtctaacaatgtgtttataagtgggggcaatcctc 3038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 6634825 - 6634886
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  6634825 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 6634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 21861264 - 21861325
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | |||||||||| || ||||||||    
T  21861264 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgagggcaatcctc 21861325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 41190984 - 41191033
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtg 243  Q
    ||||||||||||||| |||| |||||  ||||||||||| ||||||||||    
T  41190984 taagagtcccacatcagatatgtgataatctgacaatatgtttataagtg 41191033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 44874460 - 44874399
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||| |||   |||||||| | |||||||||||||  |||||||    
T  44874460 taagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcctc 44874399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 2315390 - 2315334
Alignment:
Q  188 ctgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgg 244  Q
    ||||| ||||| |||||||||| ||| ||||||||||||| || |||||||| ||||    
T  2315390 ctgtgctaagaatcccacatcgaatatgtgatggtctgactatgtatttatatgtgg 2315334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 18826602 - 18826550
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||| ||||||| ||||  |||||||| | |||||||||||||    
T  18826602 taagagtcccacattggataggagatgacctgacaatgtgtttataagtgggg 18826550  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 36993416 - 36993368
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtg 243  Q
    |||||| |||||||| |||||  ||||||||||||||| ||||||||||    
T  36993416 aagagttccacatcgaataggatatggtctgacaatatgtttataagtg 36993368  T

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Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 13612050 - 13611802
Alignment:
Q  1 ataatgagaaaaatttcagctagataatcggcatagaacgctacgccaattgaattcagagtgttaagagatcaaatactctgccaatcccttttgggat 100  Q
    ||||||||||||| |||||||||| || || |||| ||||| ||||||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||    
T  13612050 ataatgagaaaaacttcagctagagaaccgacatacaacgcaacgccaattgaattcagagagataagagaacaaatactctgccaagccctttttggat 13611951  T
Q  101 cctgttagagtgggtgtttctgtgctcctgttaagtactgagtgctatctgtttaaattgatctatatttcagtcttgcttgtaattctgtgataagagt 200  Q
    ||||||||  || ||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13611950 cctgttag--tgagtgtttctgtgctc----taagtactgagtgctatttgtttaaattgatctatatttcagtcttgcctgtaattctgtgataagagt 13611857  T
Q  201 cccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
     |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  13611856 tccacattggataggtgatggtctgacaatatatttataagtggggataatcctc 13611802  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 31254526 - 31254460
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  31254526 tgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 31254460  T

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Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35645879 - 35645818
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||||    
T  35645879 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctc 35645818  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 28245645 - 28245579
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||| ||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  28245645 tgtgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 28245579  T

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Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 50543449 - 50543383
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||| |||||||||||||||||||||||||||||| | | ||||||||||| ||||||||    
T  50543449 tgtgttaagagccccacatcggataggtgatggtctgacaatgtgtgtataagtgggggcaatcctc 50543383  T

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Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 50543681 - 50543620
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||||| | | ||||||||||| ||||||||    
T  50543681 taagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcctc 50543620  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 6778562 - 6778511
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataa 240  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  6778562 tgtgttaagagtcccacatcggataggacatggtctgacaatatatttataa 6778511  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 9279197 - 9279255
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||| ||||||||||||||||||| |||||||| | ||||||||||||| |||||    
T  9279197 taagagtcgcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatc 9279255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 22231192 - 22231126
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||| ||||||||||||  |||| |||||||| | ||||||||||||||||||||||    
T  22231192 tgtgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtggggacaatcctc 22231126  T

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Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 39902682 - 39902616
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | ||||||||||||| ||||||||    
T  39902682 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctc 39902616  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 11036860 - 11036799
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| | |||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  11036860 taagagtacaacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 11036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 13555581 - 13555520
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||||||||| ||||||| |  ||||||||||||  |||||||    
T  13555581 taagagtcccacatcggataggtgatggtttgacaatgtgcttataagtgggggaaatcctc 13555520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 27634195 - 27634134
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  |||| |||||||| | ||||||||||||| ||||||||    
T  27634195 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctc 27634134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 17111738 - 17111790
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||| |||||||||||| |||||||| | |||||||||||||    
T  17111738 taagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggg 17111790  T

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Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 22827509 - 22827569
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||| ||||| |||||||  | ||||||||||||| ||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcctc 22827569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 21498760 - 21498826
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  21498760 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 21498826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 53828408 - 53828342
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  53828408 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 53828342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 5846116 - 5846177
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||| |||| | |||||||||||| | ||||||||||||| ||||||||    
T  5846116 taagagtctcacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctc 5846177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 11104010 - 11103949
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| ||||||||| | ||||||||||||    
T  11104010 taagagtcccacatcggttaggagttggcctgacaatttatttataaatagggacaatcctc 11103949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 21498324 - 21498385
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  21498324 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 21498385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 27634630 - 27634569
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  |||| |||||||| | ||||| ||||||| ||||||||    
T  27634630 taagagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaatcctc 27634569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 35788629 - 35788690
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| ||||||  |||| |||||||| | ||||||||||||| ||||||||    
T  35788629 taagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctc 35788690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 35788864 - 35788925
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||   |||| |||||||| | ||||||||||||| ||||||||    
T  35788864 taagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcctc 35788925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 37836050 - 37836111
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| || ||||| ||||||||||||||| ||||||||    
T  37836050 taagagtcccacatcggacaggacatggcctaacaatgtatttataagtgggggcaatcctc 37836111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 44118972 - 44118912
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| | ||||| |||||||| | |||||||||||||  |||||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcctc 44118912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 5846344 - 5846410
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | |||  ||||||| | ||||||||||||| ||||||||    
T  5846344 tgtgttaagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctc 5846410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 13555361 - 13555311
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgg 244  Q
    ||||||| ||||||||||||| ||||||||||||| | ||||||| |||||    
T  13555361 taagagttccacatcggatagatgatggtctgacactgtatttatgagtgg 13555311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 45784992 - 45784942
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgg 244  Q
    |||||||||||||||||||||||||||   ||||| ||| |||||||||||    
T  45784992 taagagtcccacatcggataggtgatgacttgacagtatgtttataagtgg 45784942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 46661023 - 46660977
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataa 240  Q
    |||||||| ||||||||||| || ||| |||||||||||||||||||    
T  46661023 taagagtctcacatcggataagtaatgatctgacaatatatttataa 46660977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 400679 - 400618
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||| |||| | |||||||||||||| | |||||||||||||  |||||||    
T  400679 taagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctc 400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 2261863 - 2261806
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||| || |||| | ||| |||||||| ||||||||||||||||||||||||    
T  2261863 agtctcacattggttaggaggtggcctgacaatttatttataagtggggacaatcctc 2261806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 6218175 - 6218232
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||| ||||||||||||| |||||  | ||||||| ||||||||||||| |||||    
T  6218175 aagagtctcacatcggataggagatggcttcacaatatgtttataagtgggggcaatc 6218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 9685602 - 9685663
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||| |||||| |||| | |||||| ||||| | ||||||||||||| ||||||||    
T  9685602 taagagtcccgcatcggttaggagttggtctaacaatttgtttataagtgggggcaatcctc 9685663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 20821943 - 20822000
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||    
T  20821943 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 20822000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 22231422 - 22231361
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||| |||||||||| |  |||  |||| ||||||||||||||||||| ||||||||    
T  22231422 taagagtcctacatcggatatgatatgacctgagaatatatttataagtgggggcaatcctc 22231361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 22863444 - 22863505
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||| ||  ||||| |||||||| | ||||||||||||| ||||||||    
T  22863444 taagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctc 22863505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35797091 - 35797030
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||| |||||| ||| ||||   ||||||||| ||||||||||||| ||||||||    
T  35797091 taagagtcccatatcggacaggagatgacatgacaatatgtttataagtgggggcaatcctc 35797030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35819242 - 35819181
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | |||||| |||||| ||||||||    
T  35819242 taagagtcccacatcggttaggagttggcctgacaatttgtttatatgtgggggcaatcctc 35819181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 53815043 - 53814982
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  53815043 taagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 53814982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 53828637 - 53828576
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  53828637 taagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 53828576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 24974307 - 24974347
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaa 229  Q
    |||| |||||||||||||||||||| | |||||||||||||    
T  24974307 tgtgttaagagtcccacatcggatatgagatggtctgacaa 24974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 53698998 - 53699058
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||| || ||| | |||| ||||||||||| |||||||||| || ||||||||    
T  53698998 aagagtcccacaacgaataagagatgatctgacaatatgtttataagtgtgggcaatcctc 53699058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 24554087 - 24554145
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  24554087 taagagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatc 24554145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 33494739 - 33494797
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggga 247  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33494739 tgtgttaagagtcccacatcggataggagatggtctgacaatatatttataagtgggga 33494797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 3680216 - 3680274
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||||| |||||    
T  3680216 taagagtcccacatcggatatgtgatggtctgacaatgtgtttataagtgggggcaatc 3680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 8567072 - 8567012
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  8567072 taagagtcccacctcggataggtgatggtctgacaatgtgtttataagt-gggacaatcctc 8567012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 25065208 - 25065147
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||||||    
T  25065208 taagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcctc 25065147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 30256783 - 30256843
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||    
T  30256783 taagagtcccacatcggataggtgatgacctgacaatatgtttataagtgggg-caatcctc 30256843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 6054368 - 6054434
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||| |||||||||| | |||||||||||||  ||||||||||||||| ||||||||    
T  6054368 tgtgttaagagtccaacatcggataagagatggtctgacaaggtatttataagtgggggcaatcctc 6054434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 12199919 - 12199861
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||| |  ||||||||||||||| ||||||||||||| |||||    
T  12199919 taagagtcccacatcggataagatatggtctgacaatatgtttataagtgggggcaatc 12199861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 17147779 - 17147713
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  |||  |||||||| ||||||||||||||| ||||||||    
T  17147779 tgtgttaagagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcctc 17147713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 12330404 - 12330344
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  12330404 taagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggg-caatcctc 12330344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 31961143 - 31961208
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| ||||||||||||||| |||| ||||||| |||||||| | ||||||||||||| |||||||    
T  31961143 tgtgttaagagtcccacatcagatatgtgatggcctgacaatgtgtttataagtgggggcaatcct 31961208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 33494509 - 33494570
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||| |||||  ||| ||||| ||||||||||||| ||||||||    
T  33494509 taagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctc 33494570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 2736279 - 2736220
Alignment:
Q  196 agagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| |||| ||||  |||||||| | ||||||||||||||||||||||    
T  2736279 agagtcccacatcgggtaggagatgacctgacaatgtgtttataagtggggacaatcctc 2736220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 4868696 - 4868630
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  4868696 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 4868630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 6543057 - 6542999
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||| |||||||||||| | |||||||||||||| | ||||||||||||| |||||    
T  6543057 taagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatc 6542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 27772911 - 27772977
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  27772911 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 27772977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 2753228 - 2753289
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| || ||||| ||||||||| | |||||||||||||  |||||||    
T  2753228 taagagtcccacatcggaaagatgatgatctgacaatgtgtttataagtgggggtaatcctc 2753289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 6237816 - 6237755
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| ||||| |||| || |||||||| |||||||||||| || ||||||||    
T  6237816 taagagtcccacattggataagtgaaggcctgacaatgtatttataagtgagggcaatcctc 6237755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 6369434 - 6369495
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| ||| |||||||| ||| ||||| | ||||||||||||| ||||||||    
T  6369434 taagagtcccacattggacaggtgatgatctaacaatgtgtttataagtgggggcaatcctc 6369495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 6542827 - 6542770
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| |||||||| ||||||||||||| |||||||||||||| | ||||||| |||||    
T  6542827 tgtgttaagagtctcacatcggataggagatggtctgacaatctgtttataaatgggg 6542770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 13353171 - 13353232
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  13353171 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 13353232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 15082027 - 15081962
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| ||||||||||||| ||| |||| ||||| |||||||||| |||| |||||||| |||||||    
T  15082027 tgtgttaagagtcccacaacggttaggagatggactgacaatatgtttacaagtgggggcaatcct 15081962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 15600906 - 15600967
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | |||||||| ||| | ||||||||||||| ||||||||    
T  15600906 taagagtcccacatcggttaggagttggtctgataatttgtttataagtgggggcaatcctc 15600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 33796296 - 33796357
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  33796296 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 33796357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 9705219 - 9705285
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  ||||  | ||||| | ||||||||||||| ||||||||    
T  9705219 tgtgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcctc 9705285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 30505707 - 30505769
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttat-aagtggggacaatcctc 255  Q
    ||||||||||||||||||||   |||||||||||||| | ||| | |||||||||||||||||    
T  30505707 taagagtcccacatcggatataagatggtctgacaatgtgtttgtaaagtggggacaatcctc 30505769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 33631907 - 33631857
Alignment:
Q  205 catcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||  |||||||| | |||||||||||| |||||||||    
T  33631907 catcggataggtgatgacctgacaatgtgtttataagtgggaacaatcctc 33631857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 4868927 - 4868866
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| ||| |||| | ||||||||||||| ||||||||    
T  4868927 taagagtcccacatcggacaggacatggcctggcaatgtgtttataagtgggggcaatcctc 4868866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 6400960 - 6400899
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| | |  |||| |||||||||| ||||||||||| | ||||||||    
T  6400960 taagagtcccacatcggacatgacatggcctgacaatatgtttataagtggaggcaatcctc 6400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 12330289 - 12330232
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||| ||||    
T  12330289 agtcccagatcggataggacatggtctgacaatgtgtttataagtgggggcaaccctc 12330232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 13740886 - 13740947
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| |||||||||||| ||| ||| |||||||| | ||||||||||||  ||||||||    
T  13740886 taagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcctc 13740947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 13746386 - 13746447
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| |||||||||||| ||| ||| |||||||| | ||||||||||||  ||||||||    
T  13746386 taagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcctc 13746447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 19639227 - 19639166
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||| |||||||| ||||| |  |||| |||||||| | ||||||||||||||||||||||    
T  19639227 taagaatcccacataggataagatatggcctgacaatgtgtttataagtggggacaatcctc 19639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 21690692 - 21690753
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| ||||   ||| |||||||| | ||||||||||||| ||||||||    
T  21690692 taagagtcccacatcggttaggatttggcctgacaatttgtttataagtgggggcaatcctc 21690753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 27653187 - 27653248
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | |||||||||||||  |||||||    
T  27653187 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctc 27653248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 27656428 - 27656489
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | |||||||||||||  |||||||    
T  27656428 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctc 27656489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 27772684 - 27772745
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||| ||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  27772684 taagattcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 27772745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 28868071 - 28868010
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| || | | ||  |||||||| ||||||||||||||| ||||||||    
T  28868071 taagagtcccacatcggttacgagttgacctgacaatttatttataagtgggggcaatcctc 28868010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 16722918 - 16722870
Alignment:
Q  197 gagtcccacatcggataggtgatggtctgacaatatatttataagtggg 245  Q
    ||||||||||||||||| ||||||| |||| ||| | ||||||||||||    
T  16722918 gagtcccacatcggatatgtgatggcctgataatctgtttataagtggg 16722870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 30656510 - 30656462
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtg 243  Q
    ||||||| |||||| |||| | ||||||||||||||| |||||||||||    
T  30656510 aagagtctcacatctgataagagatggtctgacaataaatttataagtg 30656462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 38791564 - 38791503
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  38791564 taagagtcccacatcggataggagatggtctgacaatgtatttataagtgaggacaatcctc 38791503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35038542 - 35038481
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  35038542 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 35038481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 34992520 - 34992572
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  34992520 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggg 34992572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 21809261 - 21809202
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  21809261 taagagtgccacatcggatagctgatggtctgacaatataattataagtgggggcaatcc 21809202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 35038313 - 35038247
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||||| |||||||| | |||||||||||||  |||||||    
T  35038313 tgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctc 35038247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 22729072 - 22729131
Alignment:
Q  196 agagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||||||| ||||||||    
T  22729072 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctc 22729131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 20327733 - 20327667
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||| ||||||||||||||||  |||| |||||||| ||||||||||||||| ||||||||    
T  20327733 tgtgttaagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctc 20327667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 34992806 - 34992846
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaa 229  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  34992806 tgtgttaagagtcccacatcggataggtgatggtctgacaa 34992846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 4155524 - 4155590
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||| |||||  | || |||||||| | ||||||||||||||||||||||    
T  4155524 tgtgttaagagtcccacatcgcataggacaaggcctgacaatgtgtttataagtggggacaatcctc 4155590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 9273160 - 9273226
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| ||||   |||||||||||| | ||||||||||||| ||||||||    
T  9273160 tgtgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtgggggcaatcctc 9273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 20303183 - 20303117
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||| |||||||||||||| |  |||| |||||||| ||||||||||||||| ||||||||    
T  20303183 tgtgttaagaatcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctc 20303117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 20327963 - 20327902
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  20327963 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 20327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 39620291 - 39620348
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| |||||||| ||||||||||||||||||  |||||||| | |||||||||||||    
T  39620291 tgtgttaagagtctcacatcggataggtgatgacctgacaatgtgtttataagtgggg 39620348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 54368692 - 54368753
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||| |||||||||||  ||||| |||||||| ||||||||||||| | ||||||||    
T  54368692 taagagtccaacatcggatagaagatggcctgacaatgtatttataagtggtggcaatcctc 54368753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 4008655 - 4008707
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||| | ||||||||||||||||| |||||||||| ||||||| |||||    
T  4008655 taagagtctcgcatcggataggtgatggcctgacaatatgtttataaatgggg 4008707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 19954332 - 19954284
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagt 242  Q
    |||||||||||||||  ||||| |||||||||||||||| |||||||||    
T  19954332 taagagtcccacatcttataggagatggtctgacaatatgtttataagt 19954284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 45138911 - 45138855
Alignment:
Q  199 gtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| | ||||||||| |||| | ||||||||||||| ||||||||    
T  45138911 gtcccacatcggataagagatggtctggcaatgtgtttataagtgggggcaatcctc 45138855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23691311 - 23691245
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | | | |||||||| | ||||||||||||| ||||||||    
T  23691311 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctc 23691245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23708111 - 23708045
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | | | |||||||| | ||||||||||||| ||||||||    
T  23708111 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctc 23708045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23708343 - 23708277
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| | |||| | | |||||||||| | ||||||||||||| ||||||||    
T  23708343 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctc 23708277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23726567 - 23726501
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | | | |||||||| | ||||||||||||| ||||||||    
T  23726567 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctc 23726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23726799 - 23726733
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| | |||| | | |||||||||| | ||||||||||||| ||||||||    
T  23726799 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctc 23726733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23745023 - 23744957
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | | | |||||||| | ||||||||||||| ||||||||    
T  23745023 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctc 23744957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 23745255 - 23745189
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| | |||| | | |||||||||| | ||||||||||||| ||||||||    
T  23745255 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctc 23745189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 24063548 - 24063482
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | | | |||||||| | ||||||||||||| ||||||||    
T  24063548 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctc 24063482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 11589755 - 11589816
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  11589755 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 11589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 14839851 - 14839790
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||  |||||| ||||| ||||||||||| ||| ||||||||||| ||| ||||||||    
T  14839851 taagagtttcacatcagatagttgatggtctgataatgtatttataagttggggcaatcctc 14839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 16239561 - 16239622
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||||||||  |||| |||||||| | ||||||||||||| ||| ||||    
T  16239561 taagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctc 16239622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 16927063 - 16927002
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||   |||| |||||||| | |||||||||||||  |||||||    
T  16927063 taagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggtaatcctc 16927002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30138046 - 30138095
Alignment:
Q  206 atcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| |||| ||| | ||||||||||||| ||||||||    
T  30138046 atcggataggtgatggcctgataatgtgtttataagtgggggcaatcctc 30138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30147597 - 30147646
Alignment:
Q  206 atcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| |||| ||| | ||||||||||||| ||||||||    
T  30147597 atcggataggtgatggcctgataatgtgtttataagtgggggcaatcctc 30147646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 39269301 - 39269362
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| ||| ||   ||||||||||||| | ||||||||||||| ||||||||    
T  39269301 taagagtcccacattggagagcacatggtctgacaatgtgtttataagtgggggcaatcctc 39269362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 54368486 - 54368547
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| |||||  ||||| |||| ||| | ||||||||||||| ||||||||    
T  54368486 taagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaatcctc 54368547  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 27086557 - 27086593
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaat 230  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  27086557 taagagtcccacatcagataggtgatggcctgacaat 27086593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 39683388 - 39683336
Alignment:
Q  188 ctgtgataagagtcccacatcggataggtgatggtctgacaatatatttataa 240  Q
    ||||| ||||||||||||||||||||| |||||  |||||||| | |||||||    
T  39683388 ctgtgttaagagtcccacatcggatagatgatgacctgacaatgtgtttataa 39683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 2859510 - 2859446
Alignment:
Q  190 gtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||    
T  2859510 gtgataagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 2859446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 25713363 - 25713421
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  25713363 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatc 25713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 38733347 - 38733413
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||    
T  38733347 tgtgttaagagtcccacatcggatatgtgatggtctgacaatatgtttataagtgagggcaatcctc 38733413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 39808436 - 39808497
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||    
T  39808436 taagagtcccacattggatatgtgatggtctgacaatgtgtttataagtggggacaatcctc 39808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 17468315 - 17468375
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||    
T  17468315 aagagtcccacatcggataagagatggtctgacaatatgtttataagtgggggcaatcctc 17468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 8870808 - 8870742
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| ||||||||    
T  8870808 tgtgttaagagtcccacatcggatcggtgatggtgtgacaatgtgtttataagtgggggcaatcctc 8870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 25145604 - 25145538
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||| |||||||||||||||||||||||||||| | ||||| ||||||| ||||||||    
T  25145604 tgtgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcctc 25145538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 51459949 - 51459883
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||||| || ||||| | ||||||||||||| ||||||||    
T  51459949 tgtgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtgggggcaatcctc 51459883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 20208640 - 20208579
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  20208640 taagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctc 20208579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 35772229 - 35772294
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| |||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||||    
T  35772229 tgtgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcct 35772294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 11924891 - 11924943
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  11924891 taagagttacacatcggataggtgatggtctgacaatatgtttataagtgggg 11924943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 38668325 - 38668388
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| |||||||||||||||||||| |||||||| ||||||| | ||||||||||||| |||||    
T  38668325 tgtgttaagagtcccacatcggatatgtgatggtttgacaatgtgtttataagtgggggcaatc 38668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 27413547 - 27413613
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||| |||||||||||| ||||||||||| |||||||||| ||||||||||| | ||||||||    
T  27413547 tgtgttaaaagtcccacatcgcataggtgatggcctgacaatatgtttataagtggaggcaatcctc 27413613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 52961547 - 52961613
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||| ||||||||||||||||| |||||||||||||| | |||||||||| || ||||||||    
T  52961547 tgtgttaagtgtcccacatcggataggagatggtctgacaatgtgtttataagtgagggcaatcctc 52961613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 2859741 - 2859680
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||||||||||||||||||||||| | ||||| |||||||  |||||||    
T  2859741 taagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcctc 2859680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 25145834 - 25145773
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||||||||||  |||||||| ||||||| ||||||| ||||||||    
T  25145834 taagagtctcacatcggataggtgatgacctgacaatgtatttattagtgggggcaatcctc 25145773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 28408156 - 28408096
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    ||||||||||||||||| |||  | |||||||||||| | |||||||||||||||||||||    
T  28408156 taagagtcccacatcggttagaagttggtctgacaatttgtttataagtggggacaatcct 28408096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 7826144 - 7826085
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    ||||||||||||||| |||   |||||||||||||| | |||||||||||||||||||||    
T  7826144 aagagtcccacatcgaataaaagatggtctgacaatgtgtttataagtggggacaatcct 7826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 16163132 - 16163195
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| |||||||||||||||||||||||||||   ||||||| | ||||||||||||| |||||    
T  16163132 tgtgttaagagtcccacatcggataggtgatgacttgacaatgtgtttataagtgggggcaatc 16163195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 17402555 - 17402610
Alignment:
Q  197 gagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||| || |||||    
T  17402555 gagtcccacatcggataggtgatggtctgacaatttgtttaaaagtgcgggcaatc 17402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 17412306 - 17412365
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    |||||||| ||||||||||||| ||| |||||| ||| | ||||||||||||||||||||    
T  17412306 taagagtctcacatcggataggagattgtctgataatgtgtttataagtggggacaatcc 17412365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 3169736 - 3169794
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||| |||| | |||||||||||| | ||||||||||||| |||||    
T  3169736 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatc 3169794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 17452942 - 17452884
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||| |  |||| |||||||| ||||||||||||||| |||||    
T  17452942 taagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatc 17452884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 35892256 - 35892318
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    |||| ||||||||||||||| ||||   |||||||||||||| ||||||||||||||| ||||    
T  35892256 tgtgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtgggggcaat 35892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 51460201 - 51460147
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtg 243  Q
    |||| |||||||||||||||||||||||||||| || ||||| | ||||||||||    
T  51460201 tgtgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtg 51460147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 51589191 - 51589257
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | |||||||||||| | |||||||||| || ||||||||    
T  51589191 tgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctc 51589257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 52650882 - 52650824
Alignment:
Q  197 gagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| ||||| | |||||| | ||||||||||||| ||||||||    
T  52650882 gagtcccacatcggataggagatggccggacaatgtgtttataagtgggggcaatcctc 52650824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 15986447 - 15986386
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||| |||||||||||| ||| | |||||||| | ||||||||||||| ||||||||    
T  15986447 taagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctc 15986386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 16162903 - 16162964
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||| ||||||| |||||||| | ||| ||||||||||||| ||||    
T  16162903 taagagtctcacatcggatatgtgatggcctgacaatgtgtttttaagtggggacaaacctc 16162964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 26173570 - 26173513
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    ||||||||||||||| |||| | |||||||||||||| | ||||||||||||| ||||    
T  26173570 taagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaat 26173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 30369805 - 30369866
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| |||||||||||| | ||||||| |||||||| ||||||||| ||| ||||||||    
T  30369805 taagagttccacatcggatatgagatggtccgacaatatgtttataagtaggggcaatcctc 30369866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 35303554 - 35303497
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    |||||||||||||||||||||   ||| ||||||||| ||||||||||||| ||||||    
T  35303554 taagagtcccacatcggatagaacatgatctgacaatgtatttataagtggagacaat 35303497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 51588962 - 51589023
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | |||||||||||| | |||||||||| || ||||||||    
T  51588962 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctc 51589023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 21626452 - 21626392
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| |||| | ||||| |||||||||| ||||||||||||| | ||||||    
T  21626452 aagagtcccacatcagataagagatggcctgacaatatgtttataagtgggggccatcctc 21626392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 39348232 - 39348172
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||| ||| | |||||||| | ||||||||||| | ||||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtgtttataagtggaggcaatcctc 39348172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 43409777 - 43409829
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||| ||||||||||||   ||||||||||||| |||||||||||||||    
T  43409777 taagagtctcacatcggatagaacatggtctgacaatgtatttataagtgggg 43409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 51459824 - 51459760
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    |||| ||||||||||| |||||||||||||| | || ||||| | ||||||||||||| ||||||    
T  51459824 tgtgttaagagtcccatatcggataggtgatagcctaacaatgtgtttataagtgggggcaatcc 51459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 33156939 - 33156986
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataag 241  Q
    ||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  33156939 taagagttccacatcggataggagatggtctgacaatgtgtttataag 33156986  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 38733122 - 38733173
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggg 245  Q
    ||||||| |||||||| ||| |||||||||||||||| | ||||||||||||    
T  38733122 taagagttccacatcgaatatgtgatggtctgacaatgtgtttataagtggg 38733173  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 40079124 - 40079183
Alignment:
Q  196 agagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| |||||||||||| ||||  |||||||| | ||||||||||||| ||||||||    
T  40079124 agagtcctacatcggataggagatgacctgacaatgtgtttataagtgggggcaatcctc 40079183  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 26603398 - 26603444
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataa 240  Q
    |||||||| ||||||| ||||| |||||||||||||||| |||||||    
T  26603398 taagagtctcacatcgaataggagatggtctgacaatatgtttataa 26603444  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 369605 - 369666
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||  ||| ||| |||||| ||| | ||||||||||||| ||||||||    
T  369605 taagagtcccacatcgggcaggagatagtctgaaaatgtgtttataagtgggggcaatcctc 369666  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 855951 - 856012
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||| ||||||||  |||| |||||||| | |||||| |||||||||||||||    
T  855951 taagagttccacaccggataggacatggcctgacaatgtgtttatacgtggggacaatcctc 856012  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 4112890 - 4112833
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||||||||||||| ||  |||| |||||||| | |||||||||||||    
T  4112890 tgtgttaagagtcccacatcggatgggacatggcctgacaatgtgtttataagtgggg 4112833  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 4113116 - 4113059
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| ||  |||| |||||||| | ||||||||||||| ||||||||    
T  4113116 agtcccacatcggatgggacatggcctgacaatgtgtttataagtgggggcaatcctc 4113059  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 9499221 - 9499274
Alignment:
Q  199 gtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||| ||| |||||    
T  9499221 gtcccacgtcggataggagatagtctgacaatatgtttataagtaggggcaatc 9499274  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 17452789 - 17452732
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||| |||| |  |||| |||||||| ||||||||||||||| ||||||||    
T  17452789 agtcccacatcagataagacatggcctgacaatgtatttataagtgggggcaatcctc 17452732  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 38080575 - 38080635
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| || ||||| |||||||| | ||||||| ||||| ||||||||    
T  38080575 taagagtcccacatcggatgggagatggcctgacaatgtgtttataattgggg-caatcctc 38080635  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 41035941 - 41035880
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||| |||||||||  |||| ||| |||||| ||||||||||||| ||||||||    
T  41035941 taagagtctcacgtcggataggacatggcctgccaatatgtttataagtgggggcaatcctc 41035880  T

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Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 15480295 - 15480353
Alignment:
Q  197 gagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  15480295 gagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcctc 15480353  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 20510761 - 20510695
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  20510761 tgtgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctc 20510695  T

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Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 33337357 - 33337294
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  33337357 tgtgttaagagtcccacattggataggtgatggcctgacaatatgtttataagtgggggcaatc 33337294  T

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Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 95385 - 95319
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||| ||||||||||||||||||  |||||||| | ||||||||||||||||||||||    
T  95385 tgtgttaagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcctc 95319  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 18333584 - 18333518
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||| |||||||||||||||| |||||||||||||| | |||||||||||||  |||||||    
T  18333584 tgtgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcctc 18333518  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 2063847 - 2063786
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||   ||||||||||||| | ||||||||||||| ||||||||    
T  2063847 taagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcctc 2063786  T

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Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 1564680 - 1564620
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| | |||||||||||||| |  |||||||||||| ||||||||    
T  1564680 aagagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaatcctc 1564620  T

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Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 37656585 - 37656636
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggg 245  Q
    |||||||||||| |||||||||| ||||||||||||| | ||||||||||||    
T  37656585 taagagtcccacgtcggataggtaatggtctgacaatgtgtttataagtggg 37656636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 17150352 - 17150286
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||| | |||||||||||| |||||||||| ||| | ||||||||||||| ||||||||    
T  17150352 tgtgttaagagttcaacatcggataggagatggtctgaaaatgtgtttataagtgggggcaatcctc 17150286  T

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Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 24346620 - 24346554
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | |||||||||||||  |||||||    
T  24346620 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcctc 24346554  T

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Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 37782152 - 37782106
Alignment:
Q  206 atcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||    
T  37782152 atcggataggtgatggtctgacaatgtgtttataagtgggggcaatc 37782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 41666876 - 41666810
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  41666876 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 41666810  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 8081233 - 8081176
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | |||||||||||||    
T  8081233 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 8081176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 9368800 - 9368857
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    |||||||||||||||||||||| |||||  ||||||| | ||||||||||||| ||||    
T  9368800 taagagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaat 9368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 19522286 - 19522343
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| |||||||||||||||    
T  19522286 tgtgttaagagtcccacatcggttaggagttggactgacaatttatttataagtgggg 19522343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 21210035 - 21209978
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||||||||    
T  21210035 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggacaat 21209978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 21306861 - 21306918
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| |||  |||||||| |||| ||||||||||||||| ||||||||    
T  21306861 agtcccacatcggacaggacatggtctgccaatgtatttataagtgggggcaatcctc 21306918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 21314699 - 21314756
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| |||  |||||||| |||| ||||||||||||||| ||||||||    
T  21314699 agtcccacatcggacaggacatggtctgccaatgtatttataagtgggggcaatcctc 21314756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 24269989 - 24269932
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | |||||||||||||    
T  24269989 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 24269932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 24647666 - 24647727
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| | |||||| | ||||||| ||| | ||||||||    
T  24647666 taagagtcccacatcggataggtgatggccggacaatgtgtttataactggtggcaatcctc 24647727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 41667107 - 41667046
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  41667107 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 41667046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 4481682 - 4481616
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||  | ||| |||||||| | ||||||| ||||| ||||||||    
T  4481682 tgtgttaagagtcccacatcggatagaagttggcctgacaatgtgtttataaatgggggcaatcctc 4481616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 13296857 - 13296923
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||| |||||| |||| | |||||||||||| | ||||||||||||| ||| ||||    
T  13296857 tgtgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtgggggcaaccctc 13296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 15439194 - 15439252
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    ||||||||||||| | ||| | |||||| ||||||| ||||||||||||||| ||||||    
T  15439194 aagagtcccacattgcataagagatggtttgacaatgtatttataagtgggggcaatcc 15439252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 29909606 - 29909540
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||| ||||||| |||| | ||| |||||||| ||||||||||||| | ||||||||    
T  29909606 tgtgttaagagtccgacatcggttaggagttggcctgacaatttatttataagtggaggcaatcctc 29909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 30770168 - 30770102
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  |||  |||||||| | |||| |||||||| ||||||||    
T  30770168 tgtgttaagagtcccacatcggataggacatgacctgacaatgtttttaaaagtgggggcaatcctc 30770102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 31181125 - 31181067
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||| |||||||||||||||||||||   ||||||||| |||||| |||||| |||||    
T  31181125 taagattcccacatcggataggtgatgacttgacaatatgtttatatgtgggggcaatc 31181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 37781709 - 37781747
Alignment:
Q  206 atcggataggtgatggtctgacaatatatttataagtgg 244  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  37781709 atcggataggtgatggtctgacaatgtgtttataagtgg 37781747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 6413770 - 6413710
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| | |||| | ||||||| | ||||||||| ||||||||||||    
T  6413770 taagagtcccacatcggatatgagatgat-tgacaatgtgtttataagtagggacaatcctc 6413710  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 8098288 - 8098348
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  8098288 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg-caatcctc 8098348  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 11896034 - 11895977
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||  |||| ||||||||||||  |||||||| |||||||||||||||    
T  11896034 tgtgttaagagtcttacattggataggtgatgacctgacaatgtatttataagtgggg 11895977  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 13701182 - 13701125
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    ||||||||||||||||||||||  ||| || |||||| | ||||||||||||| ||||    
T  13701182 taagagtcccacatcggataggaaatgatccgacaatgtgtttataagtgggggcaat 13701125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 19705873 - 19705934
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| ||||  || | |||||||| | ||||||||||||| ||||||||    
T  19705873 taagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctc 19705934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 24487759 - 24487698
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||| |||| | |||||||| ||||| |||||||||||||  |||||||    
T  24487759 taagagtctcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcctc 24487698  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 30758409 - 30758352
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||  |||| |||||||| | |||||||| |||| ||||||||    
T  30758409 agtcccacatcggataggacatggcctgacaatgtgtttataagggggggcaatcctc 30758352  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 37657036 - 37656999
Alignment:
Q  209 ggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||||||||| | |||||||||||||    
T  37657036 ggataggtgatggtctgacaatgtgtttataagtgggg 37656999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 15438856 - 15438908
Alignment:
Q  203 cacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||| | |||||||||| ||| | ||||||||||||| ||||||||    
T  15438856 cacatcggatatgagatggtctgataatgtgtttataagtgggggcaatcctc 15438908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 24346851 - 24346799
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||| ||| |  |||| |||||||| |||||||||||||||    
T  24346851 taagagtcccacatcgaataagacatggcctgacaatgtatttataagtgggg 24346799  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 29239884 - 29239935
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||| |||||| |||||||||| |||||||||| | |||||||||||||    
T  29239884 taagagtctcacatctgataggtgat-gtctgacaatgtgtttataagtgggg 29239935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 33337565 - 33337529
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaat 230  Q
    |||||||||||||||||||||||||||  ||||||||    
T  33337565 taagagtcccacatcggataggtgatgacctgacaat 33337529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 39053043 - 39052982
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  39053043 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 39052982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 39052656 - 39052590
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| |||||||||||| |||||||| | ||||||||||||| ||||||||    
T  39052656 tgtgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 39052590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 3157674 - 3157622
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  3157674 taagagtcccacatcggataggtgatggcctggcaatgtatttataagtgggg 3157622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 5590480 - 5590421
Alignment:
Q  196 agagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||||||| ||||||||    
T  5590480 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctc 5590421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 24532535 - 24532477
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||    
T  24532535 taagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatc 24532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 28069476 - 28069410
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||| |  |||| |||||||| ||||||||||||||| ||||||||    
T  28069476 tgtgttaagagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctc 28069410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 11232543 - 11232482
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  ||||||||||||| | ||||||||||||| ||||||||    
T  11232543 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctc 11232482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 12317016 - 12317077
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  ||||||||||||| | ||||||||||||| ||||||||    
T  12317016 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctc 12317077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 31197817 - 31197878
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| |||||||||||| |||||||| | ||| ||||||| ||||||||||    
T  31197817 taagagtcccacatcagataggtgatggcctgacaatgtgtttgtaagtggagacaatcctc 31197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 12547069 - 12547121
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||| |||| | |||||||||||| |||||||||||||||    
T  12547069 taagagtcccacatcggttaggagttggtctgacaatttatttataagtgggg 12547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 29907839 - 29907779
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| | ||| |||||||||| | ||||||||||||| ||||||||    
T  29907839 aagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcctc 29907779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 422336 - 422270
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||| |||||||||||||||||| |||||||||||||| | |||| |||||| | ||||||||    
T  422336 tgtgttaaaagtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcctc 422270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 11232313 - 11232247
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  11232313 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 11232247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 16050226 - 16050292
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||| |||||||| |||| | ||| |||||||| |||||||||||| |||||||||||    
T  16050226 tgtgttaagagtctcacatcggttaggagttggcctgacaatttatttataagtgaggacaatcctc 16050292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 17477030 - 17477096
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  17477030 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 17477096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 19256705 - 19256639
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  19256705 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 19256639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 8084101 - 8084158
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| |||  || |||||||||| ||||||||||||||| ||||||||    
T  8084101 agtcccacatcggacaggacatagtctgacaatgtatttataagtgggggcaatcctc 8084158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 12688272 - 12688337
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    ||||||||||||||||||| ||||||  ||||  |||||||| | ||||||||||||| |||||||    
T  12688272 tgtgataagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatcct 12688337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 17469788 - 17469849
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  17469788 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 17469849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 18004210 - 18004149
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| || |||  |||| |||||||||| ||||||||||||| ||||||||    
T  18004210 taagagtcccacatcagacaggacatggcctgacaatatgtttataagtgggggcaatcctc 18004149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 19256934 - 19256873
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  19256934 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 19256873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 36917553 - 36917492
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||| ||||||| |||| |||||||| |||||||||||||||  |||||||    
T  36917553 taagagtctcacatcagataggtaatggcctgacaatgtatttataagtgggggtaatcctc 36917492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 39052813 - 39052772
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaat 230  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  39052813 tgtgttaagagtcccacatcggataggtgatggcctgacaat 39052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 41790637 - 41790690
Alignment:
Q  202 ccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| ||||||||||  |||||||| | ||||||||||||||||||||||    
T  41790637 ccacatcgaataggtgatgacctgacaatgtgtttataagtggggacaatcctc 41790690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 5675847 - 5675791
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    |||||||| ||||||||||| ||||||||||||||| | ||||||||| | ||||||    
T  5675847 aagagtcctacatcggatagatgatggtctgacaatgtgtttataagtagagacaat 5675791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 5940029 - 5940089
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||  | |||||| ||||||| | ||||||| ||||||||||||||    
T  5940029 aagagtcccacatcggatgagagatggtttgacaatgtgtttataaatggggacaatcctc 5940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 20094674 - 20094614
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||||||||||||||| ||||  ||||| |||||||| | |||||| ||||||||||||||    
T  20094674 taagagtcccacatcgaatagaagatggcctgacaatgtgtttatatgtggggacaatcct 20094614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 31197585 - 31197633
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagt 242  Q
    ||||||||| ||||| ||||||||||||||||||||| | |||||||||    
T  31197585 taagagtcctacatcagataggtgatggtctgacaatgtgtttataagt 31197633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 34236761 - 34236701
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||| |||||||||||| | |||||||||||||| | ||||||||||||  ||||||||    
T  34236761 aagagtgccacatcggataagagatggtctgacaatgtgtttataagtgggagcaatcctc 34236701  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 39960161 - 39960213
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||||||||| ||||| |||| ||| | |||||||||||||    
T  39960161 taagagtcccacatcggataggagatggcctgaaaatttgtttataagtgggg 39960213  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 15042789 - 15042726
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| |||||||||||||||||||| |  |||| |||||||| | ||||||||||||| |||||    
T  15042789 tgtgttaagagtcccacatcggatacgacatggcctgacaatgtgtttataagtgggggcaatc 15042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 5932068 - 5932002
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| |||||   |||| |||||||| | ||||||||||||| ||||||||    
T  5932068 tgtgttaagagtcccacatcagatagtacatggcctgacaatgtgtttataagtgggggcaatcctc 5932002  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 28213434 - 28213380
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggaca 249  Q
    |||||||  |||||||||| | ||| |||||||||| ||||||||||||||||||    
T  28213434 aagagtcttacatcggataagagatagtctgacaatgtatttataagtggggaca 28213380  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 34843082 - 34843148
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | |||||| ||||| | ||||||||||||  ||||||||    
T  34843082 tgtgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtgggagcaatcctc 34843148  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 39743494 - 39743560
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||| ||| ||||||||    
T  39743494 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagttggggcaatcctc 39743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 5932294 - 5932237
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||  ||||||| ||||| | ||||||||||||| ||| ||||    
T  5932294 agtcccacatcggataggacatggtctaacaatgtgtttataagtgggggcaagcctc 5932237  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 10449970 - 10450031
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||||||||  |||| |||||||| | |||||||||| || ||||||||    
T  10449970 taagagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcctc 10450031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 24075420 - 24075359
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||| | | ||||||||||||| ||||||||    
T  24075420 taagagtcccacatcggttaggagttggcctgacactttgtttataagtgggggcaatcctc 24075359  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 25325616 - 25325677
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  |||| || ||||| | ||||||||||||  ||||||||    
T  25325616 taagagtcccacatcggataggacatggcctaacaatgtgtttataagtgggtgcaatcctc 25325677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 34842648 - 34842709
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||| | |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  34842648 taagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcctc 34842709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35682895 - 35682834
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| |||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  35682895 taagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 35682834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 39984784 - 39984845
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||  |||| | |||||||||||| | ||||||||||||| ||||||||    
T  39984784 taagagtctcacatcgattaggagttggtctgacaatttgtttataagtgggggcaatcctc 39984845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 4828039 - 4828099
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| |||| | ||   ||||||| | ||||||||||||||||||||||    
T  4828039 aagagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcctc 4828099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 4828264 - 4828324
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||| |||| | |||  ||||||| | ||||||||||||| ||||||||    
T  4828264 aagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctc 4828324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 4873571 - 4873535
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaat 230  Q
    |||||||||||||||||||| | ||||||||||||||    
T  4873571 taagagtcccacatcggataagagatggtctgacaat 4873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 7729912 - 7729972
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||| |||| | ||||| ||||| || | ||||||||||||| ||||||||    
T  7729912 aagagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcctc 7729972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 29005843 - 29005895
Alignment:
Q  203 cacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||| ||||||| ||||  |||||||||| |||||||||||| |||||||||    
T  29005843 cacattggataggagatgacctgacaatatgtttataagtgggaacaatcctc 29005895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 35385926 - 35385874
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||||||||  ||| | |||| ||||| |||||||||||||    
T  35385926 taagagtcccacatcggatagaagatagcctgataatatgtttataagtgggg 35385874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 37001435 - 37001495
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||||||| |||  |||| |||||||  | ||||||||||||||||||||||    
T  37001435 aagagtctcacatcggacaggaaatggcctgacaaagtgtttataagtggggacaatcctc 37001495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 38447540 - 38447480
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||| |||||| | ||||| |||||||| | ||||||||||||| ||||||||    
T  38447540 aagaatcccacaacggataagagatggcctgacaatgtgtttataagtgggggcaatcctc 38447480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 17719370 - 17719431
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  17719370 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 17719431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 16419467 - 16419533
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  16419467 tgtgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctc 16419533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 37812387 - 37812321
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||||||||  |||| |||||||| | ||||||||||||||||||||||    
T  37812387 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcctc 37812321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 40379328 - 40379262
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||||||||    
T  40379328 tgtgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctc 40379262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 94134 - 94073
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||||||||    
T  94134 taagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctc 94073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 40379558 - 40379497
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||||||||    
T  40379558 taagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctc 40379497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 2324203 - 2324271
Alignment:
Q  187 tctgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||| ||||||||||||||||| |||| | |||||||||||| | ||||||||||||| ||||||||    
T  2324203 tctgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctc 2324271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 15124667 - 15124603
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    |||| |||||||||||||||||||||   ||||||||||||||| ||||||||||||| ||||||    
T  15124667 tgtgttaagagtcccacatcggatagaacatggtctgacaatatgtttataagtgggggcaatcc 15124603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 16533512 - 16533578
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||| ||| |||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  16533512 tgtgttaagagtcctacaccggataggtgatggcctgacaatgtgtttataagtgggggcaatcctc 16533578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 4662201 - 4662262
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||||||  |||  |||||||||| ||||||||||||| ||||||||    
T  4662201 taagagtcccacatcggataggacatgacctgacaatatgtttataagtgggggcaatcctc 4662262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 12343864 - 12343803
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||||| ||||||| |||||| |  |||||||||||| ||||||||    
T  12343864 taagagtcccacatcggataggagatggtcagacaatgtgcttataagtgggggcaatcctc 12343803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 44404271 - 44404214
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| ||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  44404271 aagaatcctacatcggataggtgatggtctgacaatatgtttgtaagtgggggcaatc 44404214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 93241 - 93176
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||||||| | |||||||| | ||||||||||||| || |||||    
T  93241 tgtgttaagagtcccacatcggataggtgat-gcctgacaatgtgtttataagtgggggcactcctc 93176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 5711558 - 5711492
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  5711558 tgtgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcctc 5711492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 33606173 - 33606107
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||||||| ||||| |||| ||| | ||||||||| ||| ||||||||    
T  33606173 tgtgttaagagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcctc 33606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 17525452 - 17525391
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| | |  ||||||||||||| | ||||||||||||| ||||||||    
T  17525452 taagagtcccacatcggacatgacatggtctgacaatgtgtttataagtgggggcaatcctc 17525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 32884077 - 32884138
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||||    
T  32884077 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctc 32884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 13486303 - 13486355
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||| |||| | ||| |||||||| |||||||||||||||    
T  13486303 taagagtcccacatcggttaggagttggcctgacaatttatttataagtgggg 13486355  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 18607121 - 18607065
Alignment:
Q  196 agagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||| |||||| |||||||||||| |||||||| | ||||| |||||||||||||    
T  18607121 agagtctcacatcagataggtgatggcctgacaatgtgtttattagtggggacaatc 18607065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 27036531 - 27036467
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcc 253  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | ||||||||||||| ||||||    
T  27036531 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcc 27036467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 5711794 - 5711731
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| |||||    
T  5711794 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatc 5711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 2029726 - 2029800
Alignment:
Q  181 tgtaattctgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||| || ||||||||||||||||||||||  |||  |||||||| | ||||||||||| | ||||||||    
T  2029726 tgtagttctttgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctc 2029800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 2324439 - 2324505
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||||| |||  | ||| |||||||| | ||||||||||||| ||||||||    
T  2324439 tgtgttaagagtcccacatcggttagaagttggcctgacaatttgtttataagtgggggcaatcctc 2324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 5851799 - 5851735
Alignment:
Q  194 taagagtcccacatcggataggtgatgg---tctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  ||||    |||||||| ||||||||||||||||||||||||    
T  5851799 taagagtcccacatcggacaggacatggcctgctgacaatgtatttataagtggggacaatcctc 5851735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 8424862 - 8424916
Alignment:
Q  198 agtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||| | |||| | |||||||||||| ||||||||||||||| |||||    
T  8424862 agtcccacatcagttaggagttggtctgacaatttatttataagtgggggcaatc 8424916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 31700867 - 31700813
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtg 243  Q
    |||| |||||||  ||||||||||||||||||| |||||||| | ||||||||||    
T  31700867 tgtgttaagagttacacatcggataggtgatggcctgacaatgtgtttataagtg 31700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 37770057 - 37769999
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    ||||||||||||||||| |||| | |||| ||||||| | ||||||||||||| |||||    
T  37770057 taagagtcccacatcggttaggagttggtttgacaatttgtttataagtgggggcaatc 37769999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 5509049 - 5509110
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||| |||||||| |||| | |||||||||||| | |||||||||||||  |||||||    
T  5509049 taagagtcacacatcggttaggagttggtctgacaatttgtttataagtgggggtaatcctc 5509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 12343728 - 12343687
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaat 230  Q
    |||| |||||||||||||||||||||| |||||| |||||||    
T  12343728 tgtgttaagagtcccacatcggataggagatggtttgacaat 12343687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 14466524 - 14466463
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||||||||  ||||||||    
T  14466524 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggagcaatcctc 14466463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 15518725 - 15518790
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcct 254  Q
    |||| |||||||||||||| ||||||||||  | |||||||| | |||||||||| || |||||||    
T  15518725 tgtgttaagagtcccacattggataggtgacagcctgacaatgtgtttataagtgagggcaatcct 15518790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 19191724 - 19191663
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||| |||||| |||| | ||| |||||| | | ||||||||||||||||||||||    
T  19191724 taagagtcccccatcggttaggagttggcctgacagtttgtttataagtggggacaatcctc 19191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 24396065 - 24396118
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagt 242  Q
    |||| ||||||||||||||||||||   ||||| |||||||||| |||||||||    
T  24396065 tgtgttaagagtcccacatcggatataagatggcctgacaatatgtttataagt 24396118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 27897724 - 27897667
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||| ||||||||||||||||| |||| | ||| |||||||| | |||||||||||||    
T  27897724 tgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg 27897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 37812612 - 37812551
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| |  |||  |||||||| | ||||||||||||| ||||||||    
T  37812612 taagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaatcctc 37812551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 10523224 - 10523284
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||||||||| | |||||||||||||| | ||| ||||| || ||| |||||    
T  10523224 aagagtcccacatcggataagagatggtctgacaatgtgtttttaagtaggaacattcctc 10523284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 14927073 - 14927133
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||| ||||||||||| | ||||  |||||||| | ||||||||||||| ||||||||    
T  14927073 aagagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaatcctc 14927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 21591751 - 21591803
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||  |||| | |||||||||||| | |||||||||||||    
T  21591751 taagagtcccacatcgattaggagttggtctgacaatttgtttataagtgggg 21591803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 14508 - 14560
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14508 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggg 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 14280 - 14331
Alignment:
Q  201 cccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  14280 cccacatcggataggtgatggtctgacaatgtgtttataagtggggacaatc 14331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 429843 - 429895
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  429843 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggg 429895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 2694 - 2745
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataa 240  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  2694 tgtgttaagagtcccacatcggataggacatggtctgacaatatatttataa 2745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 1886 - 1947
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  ||||||||||||| | ||||||||||||| ||||||||    
T  1886 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctc 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 2116 - 2182
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||||||||||||||| |||  |||| |||||||| | ||||||||||||| ||||||||    
T  2116 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctc 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 12617 - 12678
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||  |||||||||||||||| ||||||| |||||||| |||||| ||||||||    
T  12617 taagagtcccatgtcggataggtgatggtttgacaatgtatttatatgtgggggcaatcctc 12678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 12846 - 12912
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| |||||| ||||||||| |||||||||||  |||||||  |||||||||||||| ||||||||    
T  12846 tgtgttaagagccccacatcgaataggtgatggcttgacaatgaatttataagtgggggcaatcctc 12912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 288770 - 288726
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttata 239  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  288770 aagagtcccacatcggataggagatggtctgacaatgtatttata 288726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 6239 - 6305
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||||||||||||||| |||| | ||| |||||||||| | ||||||||||||| ||||||||    
T  6239 tgtgttaagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctc 6305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 5868 - 5807
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||||| |  || |||||||||| | ||||||||||||| ||||||||    
T  5868 taagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcctc 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 13072 - 13129
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| ||| ||||||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  13072 aagaatcctacatcggataggtgatggtctaacaatatgtttgtaagtgggggcaatc 13129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 10713 - 10770
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| ||| ||||||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  10713 aagaatcctacatcggataggtgatggtctaacaatatgtttgtaagtgggggcaatc 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 14379 - 14436
Alignment:
Q  195 aagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatc 252  Q
    |||| ||| ||||||||||||||| ||||||||||||| ||| ||||||||| |||||    
T  14379 aagaatcctacatcggataggtgacggtctgacaatatgtttgtaagtgggggcaatc 14436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 81812 - 81869
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaat 251  Q
    |||||||||||||||||| ||   |||| |||||||||| ||||||||||||||||||    
T  81812 taagagtcccacatcggacagaacatggcctgacaatatgtttataagtggggacaat 81869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 3814 - 3866
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||||||| |||||| |||||||| | || ||||||||||    
T  3814 taagagtcccacatcggatagctgatggcctgacaatgtgttaataagtgggg 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 4458 - 4510
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtgggg 246  Q
    ||||||||||||||||||||| |||||| |||||||| | || ||||||||||    
T  4458 taagagtcccacatcggatagctgatggcctgacaatgtgttaataagtgggg 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 5855 - 5921
Alignment:
Q  189 tgtgataagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||| ||| ||| |||||||||||||  |||||  ||||||||| |||||||||| |||||||||||    
T  5855 tgtgttaacagttccacatcggatagaagatggcatgacaatatgtttataagtgaggacaatcctc 5921  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 20545 - 20606
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    |||||||||||||||||| |||  |||| |||||||| | ||||||| ||||| ||||||||    
T  20545 taagagtcccacatcggacaggatatggcctgacaatgtgtttataattgggggcaatcctc 20606  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 69647 - 69586
Alignment:
Q  194 taagagtcccacatcggataggtgatggtctgacaatatatttataagtggggacaatcctc 255  Q
    ||||||||||||| |||||||   |||| |||||||| | ||||||||||||| ||||||||    
T  69647 taagagtcccacaacggatagaacatggcctgacaatctgtttataagtgggggcaatcctc 69586  T

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