View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9176_low_1 (Length: 1047)

Name: NF9176_low_1
Description: NF9176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9176_low_1
NF9176_low_1
[»] chr7 (40 HSPs)
chr7 (19-1026)||(23569026-23570033)
chr7 (349-549)||(23596252-23596450)
chr7 (606-883)||(23595954-23596225)
chr7 (19-228)||(23596575-23596792)
chr7 (935-1029)||(21416162-21416256)
chr7 (304-396)||(23596449-23596541)
chr7 (921-998)||(27598014-27598091)
chr7 (959-1009)||(16569263-16569313)
chr7 (959-1009)||(16596349-16596399)
chr7 (959-998)||(1085668-1085707)
chr7 (959-998)||(7517647-7517686)
chr7 (926-1029)||(21416452-21416555)
chr7 (959-998)||(22566714-22566753)
chr7 (959-1009)||(23418-23468)
chr7 (959-1009)||(6054627-6054677)
chr7 (959-1009)||(29157632-29157682)
chr7 (963-1009)||(30244341-30244387)
chr7 (959-1009)||(30245144-30245194)
chr7 (961-1010)||(14681579-14681628)
chr7 (960-1009)||(30253560-30253609)
chr7 (959-1008)||(37533406-37533455)
chr7 (962-1009)||(7554095-7554142)
chr7 (960-998)||(1085300-1085338)
chr7 (959-1009)||(11845258-11845308)
chr7 (959-1009)||(22567080-22567130)
chr7 (963-1009)||(34218075-34218121)
chr7 (959-1009)||(45434703-45434753)
chr7 (963-1009)||(45754786-45754832)
chr7 (961-998)||(28300305-28300342)
chr7 (958-998)||(21619097-21619137)
chr7 (962-1009)||(9901713-9901760)
chr7 (963-998)||(19122802-19122837)
chr7 (959-998)||(24177502-24177541)
chr7 (962-1009)||(24838742-24838789)
chr7 (959-998)||(36939785-36939824)
chr7 (959-998)||(40094826-40094865)
chr7 (959-993)||(37533067-37533101)
chr7 (963-1009)||(45433312-45433358)
chr7 (959-1009)||(47129162-47129212)
chr7 (942-1004)||(48071436-48071498)
[»] chr4 (45 HSPs)
chr4 (884-998)||(10396407-10396522)
chr4 (921-1009)||(11197255-11197343)
chr4 (884-1026)||(10396122-10396265)
chr4 (959-1009)||(50630794-50630844)
chr4 (959-1009)||(54017634-54017684)
chr4 (959-1009)||(54936263-54936313)
chr4 (921-1026)||(922447-922552)
chr4 (920-1009)||(11196960-11197053)
chr4 (961-1009)||(44620422-44620470)
chr4 (943-998)||(1868102-1868157)
chr4 (962-1009)||(25483406-25483453)
chr4 (959-998)||(49302973-49303012)
chr4 (963-1009)||(15841407-15841453)
chr4 (959-1009)||(18932788-18932838)
chr4 (959-1009)||(36629304-36629354)
chr4 (959-1009)||(55933163-55933213)
chr4 (959-998)||(1731697-1731736)
chr4 (959-998)||(3340874-3340913)
chr4 (963-998)||(4955367-4955402)
chr4 (959-998)||(22183314-22183353)
chr4 (959-998)||(31691219-31691258)
chr4 (959-998)||(41370424-41370463)
chr4 (960-998)||(3271855-3271893)
chr4 (963-1009)||(23817720-23817766)
chr4 (963-1009)||(32941162-32941208)
chr4 (963-1009)||(34646688-34646734)
chr4 (959-1009)||(49880227-49880277)
chr4 (959-1009)||(50002493-50002543)
chr4 (944-998)||(51681590-51681644)
chr4 (923-1009)||(53468039-53468124)
chr4 (959-1009)||(54108980-54109029)
chr4 (965-1009)||(39792899-39792943)
chr4 (969-1009)||(54343047-54343087)
chr4 (959-998)||(2741138-2741177)
chr4 (958-997)||(36572085-36572124)
chr4 (962-1009)||(36608700-36608747)
chr4 (959-1009)||(22028000-22028050)
chr4 (959-1009)||(22028408-22028458)
chr4 (959-1009)||(45496872-45496922)
chr4 (963-1009)||(51768099-51768145)
chr4 (964-1009)||(52884767-52884813)
chr4 (962-1007)||(10245989-10246034)
chr4 (964-1009)||(16888855-16888900)
chr4 (959-1008)||(18879873-18879922)
chr4 (960-1009)||(20826285-20826334)
[»] chr3 (48 HSPs)
chr3 (884-1009)||(53595951-53596077)
chr3 (884-1009)||(53596266-53596392)
chr3 (884-998)||(48127867-48127982)
chr3 (959-1009)||(32589770-32589820)
chr3 (922-998)||(16143468-16143544)
chr3 (957-1009)||(52634740-52634792)
chr3 (942-1008)||(54017590-54017656)
chr3 (959-998)||(22303711-22303750)
chr3 (959-1009)||(1634355-1634405)
chr3 (959-1009)||(12114603-12114653)
chr3 (959-1009)||(22303996-22304046)
chr3 (959-1009)||(22304636-22304686)
chr3 (921-991)||(43978634-43978704)
chr3 (943-1000)||(17735041-17735098)
chr3 (943-1000)||(19036310-19036367)
chr3 (959-1008)||(39389137-39389186)
chr3 (960-1009)||(43346832-43346881)
chr3 (942-998)||(17731956-17732012)
chr3 (942-998)||(19033187-19033243)
chr3 (959-995)||(41359820-41359856)
chr3 (959-998)||(29644954-29644993)
chr3 (958-1009)||(32462941-32462992)
chr3 (962-1009)||(39934996-39935043)
chr3 (959-998)||(47964570-47964609)
chr3 (956-1043)||(53596539-53596626)
chr3 (944-998)||(16871011-16871065)
chr3 (960-998)||(29644633-29644671)
chr3 (959-1009)||(35946589-35946639)
chr3 (963-1009)||(37990680-37990726)
chr3 (959-1009)||(42342429-42342479)
chr3 (962-1004)||(46546371-46546413)
chr3 (952-1008)||(3135496-3135552)
chr3 (959-1011)||(54018237-54018289)
chr3 (959-998)||(4823722-4823761)
chr3 (959-998)||(33803304-33803343)
chr3 (958-1009)||(39336011-39336062)
chr3 (963-998)||(42342142-42342177)
chr3 (931-994)||(43978925-43978988)
chr3 (962-1009)||(45395694-45395741)
chr3 (959-998)||(52635007-52635046)
chr3 (959-1009)||(15772921-15772971)
chr3 (959-1009)||(25739466-25739516)
chr3 (959-1009)||(37991018-37991068)
chr3 (960-1009)||(3135114-3135163)
chr3 (960-1009)||(8327972-8328021)
chr3 (971-1008)||(15773271-15773308)
chr3 (968-1009)||(31190085-31190126)
chr3 (921-966)||(40195904-40195949)
[»] chr5 (37 HSPs)
chr5 (921-1029)||(13042568-13042676)
chr5 (921-1029)||(13112566-13112674)
chr5 (959-1009)||(26074679-26074729)
chr5 (921-996)||(13043025-13043100)
chr5 (921-996)||(13113021-13113096)
chr5 (959-998)||(18603172-18603211)
chr5 (959-998)||(32487460-32487499)
chr5 (959-998)||(41170701-41170740)
chr5 (959-1009)||(9498695-9498745)
chr5 (959-1009)||(26074187-26074237)
chr5 (959-1009)||(40296356-40296406)
chr5 (965-1009)||(6500523-6500567)
chr5 (958-998)||(34753077-34753117)
chr5 (958-1009)||(3295056-3295107)
chr5 (962-1009)||(11417018-11417065)
chr5 (943-1026)||(13042305-13042388)
chr5 (943-1026)||(13112299-13112382)
chr5 (959-998)||(36521948-36521987)
chr5 (959-1009)||(624263-624313)
chr5 (959-1009)||(6500889-6500939)
chr5 (959-1009)||(25328002-25328052)
chr5 (959-993)||(26075219-26075253)
chr5 (957-1009)||(35150071-35150123)
chr5 (971-1023)||(36389307-36389359)
chr5 (959-998)||(13415812-13415851)
chr5 (959-998)||(15370469-15370508)
chr5 (959-998)||(36568619-36568658)
chr5 (959-1009)||(3295386-3295435)
chr5 (972-1026)||(13112782-13112836)
chr5 (959-1009)||(15370166-15370216)
chr5 (960-998)||(24489258-24489296)
chr5 (959-1009)||(36522278-36522328)
chr5 (959-1009)||(41632849-41632899)
chr5 (942-995)||(14168984-14169037)
chr5 (953-998)||(36389028-36389073)
chr5 (942-995)||(41341505-41341558)
chr5 (963-1008)||(42405638-42405683)
[»] chr2 (44 HSPs)
chr2 (884-1029)||(13792517-13792661)
chr2 (921-1009)||(28226366-28226454)
chr2 (921-991)||(19548173-19548243)
chr2 (959-1009)||(36178646-36178696)
chr2 (921-1009)||(35448656-35448744)
chr2 (959-998)||(14745346-14745385)
chr2 (959-998)||(14745719-14745758)
chr2 (959-998)||(15880330-15880369)
chr2 (884-998)||(30219933-30220048)
chr2 (962-1009)||(35580765-35580812)
chr2 (959-1009)||(6421798-6421848)
chr2 (959-1009)||(28254278-28254328)
chr2 (940-1009)||(28226703-28226771)
chr2 (961-1009)||(23346305-23346353)
chr2 (959-1003)||(31468797-31468841)
chr2 (959-998)||(962665-962704)
chr2 (959-998)||(29874075-29874114)
chr2 (959-998)||(37106255-37106294)
chr2 (963-998)||(37895113-37895148)
chr2 (959-1009)||(5542666-5542716)
chr2 (959-1009)||(6422177-6422227)
chr2 (959-1009)||(15511536-15511586)
chr2 (959-1013)||(30323531-30323585)
chr2 (959-1009)||(33561492-33561542)
chr2 (960-998)||(36178223-36178261)
chr2 (959-1009)||(37105991-37106041)
chr2 (964-1009)||(3672773-3672818)
chr2 (959-996)||(35580494-35580531)
chr2 (959-1009)||(6713043-6713094)
chr2 (958-1009)||(29676974-29677025)
chr2 (959-990)||(31385804-31385835)
chr2 (962-997)||(33731718-33731753)
chr2 (959-998)||(36005932-36005971)
chr2 (963-998)||(36178321-36178356)
chr2 (959-998)||(41283527-41283566)
chr2 (959-998)||(42514716-42514755)
chr2 (962-1008)||(5543040-5543086)
chr2 (963-1009)||(6421456-6421502)
chr2 (959-1009)||(6421693-6421743)
chr2 (963-1009)||(29873578-29873624)
chr2 (225-263)||(33348288-33348326)
chr2 (959-997)||(38796673-38796711)
chr2 (960-998)||(40679681-40679719)
chr2 (961-998)||(28531366-28531403)
[»] chr8 (34 HSPs)
chr8 (373-534)||(32153097-32153256)
chr8 (931-991)||(5981793-5981852)
chr8 (961-1009)||(30441154-30441202)
chr8 (959-998)||(3038342-3038381)
chr8 (959-1009)||(5915934-5915984)
chr8 (959-1009)||(30359338-30359388)
chr8 (960-1009)||(147888-147937)
chr8 (921-1026)||(3671165-3671270)
chr8 (959-1008)||(9483229-9483278)
chr8 (921-989)||(3670860-3670928)
chr8 (959-998)||(32640584-32640623)
chr8 (959-998)||(40518138-40518177)
chr8 (963-1009)||(3669758-3669804)
chr8 (959-1009)||(3670127-3670177)
chr8 (959-1009)||(33113408-33113458)
chr8 (963-1009)||(34834947-34834993)
chr8 (960-1009)||(6651562-6651611)
chr8 (963-1004)||(12156704-12156745)
chr8 (957-1009)||(4154322-4154374)
chr8 (958-998)||(18371713-18371752)
chr8 (959-998)||(70326-70365)
chr8 (959-998)||(147518-147557)
chr8 (959-998)||(8918816-8918855)
chr8 (963-998)||(9507853-9507888)
chr8 (959-998)||(34835276-34835315)
chr8 (959-998)||(34835542-34835581)
chr8 (959-998)||(34835808-34835847)
chr8 (959-998)||(40518649-40518688)
chr8 (958-1008)||(5274841-5274891)
chr8 (959-997)||(9309046-9309084)
chr8 (959-1009)||(20870614-20870664)
chr8 (960-1009)||(6731963-6732012)
chr8 (936-1009)||(11576087-11576160)
chr8 (960-1009)||(45122098-45122147)
[»] chr1 (29 HSPs)
chr1 (959-1009)||(17294644-17294694)
chr1 (958-1009)||(26661939-26661990)
chr1 (959-1009)||(26661563-26661613)
chr1 (959-1009)||(34364992-34365042)
chr1 (959-997)||(44290511-44290549)
chr1 (965-1009)||(9955982-9956026)
chr1 (921-1009)||(31973376-31973464)
chr1 (965-1009)||(34364580-34364624)
chr1 (958-1009)||(14318933-14318984)
chr1 (959-998)||(32168750-32168789)
chr1 (962-1009)||(37556181-37556228)
chr1 (962-1009)||(41759553-41759600)
chr1 (958-1009)||(48588529-48588580)
chr1 (963-1009)||(3550791-3550837)
chr1 (963-1009)||(11977351-11977397)
chr1 (959-1009)||(32594757-32594807)
chr1 (959-1009)||(44043813-44043863)
chr1 (959-993)||(44290882-44290916)
chr1 (959-1008)||(41157058-41157107)
chr1 (959-998)||(66139-66178)
chr1 (959-998)||(3537651-3537690)
chr1 (959-998)||(5320017-5320056)
chr1 (959-998)||(41157442-41157481)
chr1 (962-1009)||(45494015-45494062)
chr1 (963-1009)||(11977015-11977061)
chr1 (963-1009)||(29798270-29798316)
chr1 (960-998)||(30630690-30630728)
chr1 (960-998)||(34649506-34649544)
chr1 (959-993)||(41142439-41142473)
[»] chr6 (29 HSPs)
chr6 (942-995)||(22605310-22605363)
chr6 (959-998)||(2377821-2377860)
chr6 (962-1009)||(3058296-3058343)
chr6 (959-1009)||(3409326-3409376)
chr6 (959-1009)||(3415525-3415575)
chr6 (959-1009)||(10074032-10074082)
chr6 (959-1009)||(10074404-10074454)
chr6 (963-1009)||(16107749-16107795)
chr6 (959-1009)||(29518570-29518620)
chr6 (959-1009)||(29518987-29519037)
chr6 (959-1009)||(32741246-32741296)
chr6 (959-1008)||(2578485-2578534)
chr6 (944-1009)||(11637762-11637827)
chr6 (959-998)||(16454974-16455013)
chr6 (943-998)||(21130109-21130164)
chr6 (963-998)||(32460632-32460667)
chr6 (959-998)||(35210271-35210310)
chr6 (959-1009)||(26544116-26544166)
chr6 (961-998)||(2843624-2843661)
chr6 (960-1008)||(1846816-1846864)
chr6 (963-998)||(1127431-1127466)
chr6 (959-998)||(14748390-14748429)
chr6 (959-998)||(16454642-16454681)
chr6 (959-1009)||(2378193-2378243)
chr6 (962-1008)||(2578877-2578923)
chr6 (959-1009)||(2579913-2579963)
chr6 (959-1009)||(3409727-3409777)
chr6 (963-1009)||(8481997-8482043)
chr6 (920-1026)||(11638037-11638143)
[»] scaffold0702 (1 HSPs)
scaffold0702 (959-998)||(566-605)
[»] scaffold0391 (2 HSPs)
scaffold0391 (959-1009)||(1732-1782)
scaffold0391 (963-997)||(1159-1193)
[»] scaffold0078 (2 HSPs)
scaffold0078 (958-1009)||(5048-5099)
scaffold0078 (959-1009)||(5424-5474)


Alignment Details
Target: chr7 (Bit Score: 940; Significance: 0; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 940; E-Value: 0
Query Start/End: Original strand, 19 - 1026
Target Start/End: Complemental strand, 23570033 - 23569026
Alignment:
Q  19 attggaaacttcaaacacactgaaacaattacatctattcatcacaaatacagttttctgtgtacaataggaaaaagtgtgtatgctcatcacatattat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23570033 attggaaacttcaaacacactgaaacaattacatctattcatcacaaatacagttttctgtgtacaataggaaaaagtgtgtatgctcatcacattttat 23569934  T
Q  119 ggtatagctgtaaaacaaattttgtcgttatttcgtgacccgccttcaacaagcatgtgctactccatcaatttcttctttgccagatccggtccttaat 218  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23569933 ggtatagccgtaaaacaaattttgtcgttatttcgtgacctgccttcaacaagcatgtgctactccatcaatttcttctttgccagatccggtccttaat 23569834  T
Q  219 atacccaaatgttgcttgcttgcttcttccaatcatagatggcagccccaaatatttactagtacctaggactgcttctacgtcgagaatttgcataatg 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23569833 atacccaaatgttgcttgcttgcttcttccaatcatagatggcagcccaaaatatttactagtacctaggactgcttctacgtcgagaatttgcataatg 23569734  T
Q  319 gaactgtgcgttggttggtcaatcgctatactataatgaatttcaaacatcaggagacttaccgctttccctgatgctgcctcatatgtcgtcaagatat 418  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23569733 gaactgtgtgttggttggtcaatcgctatactataatgaatttcaaacatcagaagacttaccgctttccctgatgctgcctcatatgtcgtcaagatat 23569634  T
Q  419 atttttcataatatgcgcttcaaattcagtacccctgaaaaatagaaaacaggcatcgacgaataaaagatgaaacaacactagtgcactaacacaaatt 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23569633 atttttcataatatgcgcttcaaattcagtacccctgaaaaatagacaacagtcatcgacgaataaaagatgaaacaacactagtgcactaacacaaatt 23569534  T
Q  519 cgtatgccatataaatcacgcctcctcttagattgtctgataagtgcagacagtccatttgcacaaagaacaaataggtacggagatcccaccccgtgat 618  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23569533 cgaatgccatataaatcacgcatcctcttagattgtctgataagtgcagacagtccatttgcacaaagaacaaataggtacggagatcccactccgtgat 23569434  T
Q  619 aattggaccaaccaaattattattgaggatgacagaataatccacggatttaacacacagaacaattcaccgaaccgattatggcgcaaatcccaatttc 718  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23569433 aattggaccaaccaaattattattgaggatgatagaataatccacggatttaacacacagaacaattcaccgaaccgattatggcgcaaatcccaatttc 23569334  T
Q  719 aacatgacatcctttagatacacccaatcaattctatttaattatgctttacttatatcgaatttgagtgcgacatttttgttactcttgtgtcattcca 818  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23569333 aacatgacttcctttagatacacccaatcaattctatttaattatgctttacttatatccaatttgagtgcgacatttttgttactcttgtgtcattcca 23569234  T
Q  819 ttttcatatgatggacaacttcatatgcgaccaatgcattgttcatgatagatctgatagatacatgttggaaatcaaatgtgagcaattatgtccatgt 918  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23569233 ttttcatatgatggacaacttcatatgcgaccaatgcattgttcatgatagatctgatagatacatgttggaaatcaaatgtgagcaattatgtccacgt 23569134  T
Q  919 taactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgg 1018  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23569133 taactagaaatagaggaaaagttggatatataaaagaggaggcccataaacccattgccttaaggttttgggtaagagtgtgatgtctctcatttagtgg 23569034  T
Q  1019 gtcctaga 1026  Q
    ||||||||    
T  23569033 gtcctaga 23569026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 349 - 549
Target Start/End: Complemental strand, 23596450 - 23596252
Alignment:
Q  349 ctataatgaatttcaaacatcaggagacttaccgctttccctgatgctgcctcatatgtcgtcaagatatatttttcataatatgcgcttcaaattcagt 448  Q
    |||||||||||||||||| || |||||||||| | || ||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||  |    
T  23596450 ctataatgaatttcaaacttctggagacttactgtttgccctgatgctgcctcatatgtcgtcaagatat--ttttcataatatgtgcttcagattccat 23596353  T
Q  449 acccctgaaaaatagaaaacaggcatcgacgaataaaagatgaaacaacactagtgcactaacacaaattcgtatgccatataaatcacgcctcctctta 548  Q
     || |||||||||||||||||  ||||| |||||||||||||||||| || | ||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  23596352 tcctctgaaaaatagaaaacaatcatcggcgaataaaagatgaaacaccattggtgcattaacacaaatttgtatgccatataaatcacccctcctctta 23596253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 606 - 883
Target Start/End: Complemental strand, 23596225 - 23595954
Alignment:
Q  606 cccaccccgtgataattggaccaaccaaattattattgaggatgacagaataatccacggatttaacacacagaacaattcaccgaaccgattatggcgc 705  Q
    |||||||||||| |||  ||||| ||||||||| ||||| ||||||||| || |||||||||| | |||||| || |||||||| ||   ||||||||||    
T  23596225 cccaccccgtgaaaatcagaccacccaaattataattgacgatgacagattattccacggattcaccacacataagaattcaccaaattcattatggcgc 23596126  T
Q  706 aaatcccaatttcaacatgacatcctttagatacacccaatcaattctatttaattatgctttacttatatcgaatttgagtgcgacatttttgttactc 805  Q
    ||| ||| ||||||||||||| ||||| | |||||||||||||||    ||||  |   ||||||||||||| |||||||||||||||    ||||||||    
T  23596125 aaaaccccatttcaacatgacttccttcatatacacccaatcaat----tttatctgcactttacttatatccaatttgagtgcgaca--actgttactc 23596032  T
Q  806 ttgtgtcattccattttcatatgatggacaacttcatatgcgaccaatgcattgttcatgatagatctgatagataca 883  Q
    ||||| |  |||||||||||||||| || ||||| | ||| |||| |||| |||| ||| ||||||||||||||||||    
T  23596031 ttgtgccgatccattttcatatgatagataactttaaatgtgaccgatgcgttgtccataatagatctgatagataca 23595954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 23596792 - 23596575
Alignment:
Q  19 attggaaacttcaaacacactgaaacaattacatctattcatcacaaatacagttttctgtgtacaataggaaaaagtgtgtatg------ctcatcaca 112  Q
    ||||||||||||||||||||  ||||||||||| ||||||| ||||  |||| |||||||||||||||| |||||||||||||||      |||||||||    
T  23596792 attggaaacttcaaacacacgcaaacaattacagctattca-cacagctacacttttctgtgtacaataagaaaaagtgtgtatgtaaatactcatcaca 23596694  T
Q  113 tattatggtatagc-tgtaaaacaaattttgt--cgttatttcgtgacccgccttcaacaagcatgtgctactccatcaatttcttctttgccagatccg 209  Q
    ||  | || ||||| |  |||||| ||| | |  | ||||||||||||||  |||| | |||||||||||||||||| ||||| |||||||||||||| |    
T  23596693 tacgacggaatagcctacaaaacagattgtatatcattatttcgtgacccttcttcgataagcatgtgctactccatgaatttattctttgccagatctg 23596594  T
Q  210 gtccttaatatacccaaat 228  Q
     ||||||||||||||||||    
T  23596593 atccttaatatacccaaat 23596575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 935 - 1029
Target Start/End: Complemental strand, 21416256 - 21416162
Alignment:
Q  935 aaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 1029  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||  |||| |||||||||||||    
T  21416256 aaaaattggatatataagagaggagacccataaacccattgccttagggttttgggtaagagtgtggtgtctctctcttagcgggtcctagatgt 21416162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 304 - 396
Target Start/End: Complemental strand, 23596541 - 23596449
Alignment:
Q  304 agaatttgcataatggaactgtgcgttggttggtcaatcgctatactataatgaatttcaaacatcaggagacttaccgctttccctgatgct 396  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||||||    
T  23596541 agaatttgcataatggaagtgcgtgttggttgatcaatcggtatactataatgaatttcaaccttctggagacttaccgcttgccctgatgct 23596449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 921 - 998
Target Start/End: Original strand, 27598014 - 27598091
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||| |||| ||| ||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||    
T  27598014 actataaattgagcaaacgttggatatataagagaggagacccataaacccattgtcttagggttttgcgtaagagtg 27598091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 16569263 - 16569313
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  16569263 gacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctc 16569313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 16596399 - 16596349
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  16596399 gacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctc 16596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 1085707 - 1085668
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1085707 gacccataaacccattgccttaaggttttgggtaagagtg 1085668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 7517647 - 7517686
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7517647 gacccataaacccattgccttaaggttttgggtaagagtg 7517686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 21416555 - 21416452
Alignment:
Q  926 aaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctag 1025  Q
    |||| ||| ||||||||| ||||||| || |||||||||||||| | ||| |||  |||||||||||||| || | ||||||||  |||| |||||||||    
T  21416555 aaatggagcaaaagttggttatataagagcggagacccataaactcgttgtctttgggttttgggtaagaatgtggtgtctctctcttagcgggtcctag 21416456  T
Q  1026 atgt 1029  Q
    ||||    
T  21416455 atgt 21416452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 22566753 - 22566714
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22566753 gacccataaacccattgccttaaggttttgggtaagagtg 22566714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 23468 - 23418
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  23468 gacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctc 23418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6054627 - 6054677
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6054627 gacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctc 6054677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 29157632 - 29157682
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  29157632 gacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctc 29157682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 30244341 - 30244387
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||    
T  30244341 cataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 30244387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 30245144 - 30245194
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  30245144 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 30245194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 961 - 1010
Target Start/End: Original strand, 14681579 - 14681628
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtgcgatgtctctca 1010  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  14681579 cccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctca 14681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 30253560 - 30253609
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  30253560 acccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 30253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 959 - 1008
Target Start/End: Complemental strand, 37533455 - 37533406
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  37533455 gacccataaatccattgccttaaggttttgggtaagagtgtggtgtctct 37533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 7554095 - 7554142
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||    
T  7554095 ccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 7554142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 1085338 - 1085300
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  1085338 acccataaactcattgccttaaggttttgggtaagagtg 1085300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 11845258 - 11845308
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||||||||||||||||||| |||||||| | ||||||||    
T  11845258 gacccataaatccattgccttaaggttttggataagagtgtggtgtctctc 11845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 22567130 - 22567080
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||||||||||||||| |||||||||| | ||||||||    
T  22567130 gacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctc 22567080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 34218121 - 34218075
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||    
T  34218121 cataaacccattgtcttaaggttttgggtaagagtgtggtgtctctc 34218075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 45434703 - 45434753
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  45434703 gacccataaacttactgccttaaggttttgggtaagagtgtgatgtctctc 45434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 45754786 - 45754832
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||    
T  45754786 cataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 45754832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 961 - 998
Target Start/End: Complemental strand, 28300342 - 28300305
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28300342 cccataaacccattgccttaagattttgggtaagagtg 28300305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 958 - 998
Target Start/End: Complemental strand, 21619137 - 21619097
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  21619137 agacccataaacccattgtcttaaggttttgggtaaaagtg 21619097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 9901713 - 9901760
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||    
T  9901713 ccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctc 9901760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 998
Target Start/End: Original strand, 19122802 - 19122837
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||| |||||||||||||||||||||||||||||    
T  19122802 cataaatccattgccttaaggttttgggtaagagtg 19122837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 24177502 - 24177541
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  24177502 gacccataaacccattgccttaaagtttttggtaagagtg 24177541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 24838789 - 24838742
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| ||| |||||||||||||||||||||| || |||||||    
T  24838789 ccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctctc 24838742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 36939824 - 36939785
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  36939824 gacccataaatccattgccttaaggttttgggtaaaagtg 36939785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 40094865 - 40094826
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  40094865 gacccataaacccatcgtcttaaggttttgggtaagagtg 40094826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 993
Target Start/End: Complemental strand, 37533101 - 37533067
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaa 993  Q
    ||||||||||| |||||||||||||||||||||||    
T  37533101 gacccataaactcattgccttaaggttttgggtaa 37533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 45433312 - 45433358
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||| ||||||||||| ||||||||||||||| | ||||||||    
T  45433312 cataaacctattgccttaagattttgggtaagagtgtggtgtctctc 45433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 47129162 - 47129212
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||| || ||||||||||||||| ||||| | ||||||||    
T  47129162 gacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctc 47129212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 942 - 1004
Target Start/End: Original strand, 48071436 - 48071498
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgt 1004  Q
    |||||||||| |||||  || |||||||| |||| ||||||||||||| |||||||| |||||    
T  48071436 ggatatataagagagggaactcataaacctattgtcttaaggttttggataagagtgtgatgt 48071498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 8e-30; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 884 - 998
Target Start/End: Original strand, 10396407 - 10396522
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtc-catgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| ||||||  |||||||| ||| || ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| |    
T  10396407 tgttggaaatcaagtgtgagtgattatgtctcatattgactagaaatggaggaaatgttggatatataagagaggagacccataaacccattgccttagg 10396506  T
Q  983 gttttgggtaagagtg 998  Q
    ||||||| ||||||||    
T  10396507 gttttggataagagtg 10396522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 921 - 1009
Target Start/End: Original strand, 11197255 - 11197343
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  11197255 actagaaatggaggaaacgttggatatataagagaggagacccataaacccattgccttagggttttgggtaagagtgtggtgtctctc 11197343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 884 - 1026
Target Start/End: Original strand, 10396122 - 10396265
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtc-catgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| ||||||  |||||||| ||  |  || |||||| ||||||| |||| |||||||| |||| ||||||||||||||||||||||| |    
T  10396122 tgttggaaatcaagtgtgagtgattatgtctcacatcgacaagaaatggaggaaatgttgaatatataagagagaagacccataaacccattgccttagg 10396221  T
Q  983 gttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 1026  Q
    ||||| |||||||| | | ||||||||  |||| ||||| ||||    
T  10396222 gttttaggtaagagggtggtgtctctctcttagcgggtcataga 10396265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 50630844 - 50630794
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  50630844 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 50630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 54017684 - 54017634
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  54017684 gacccataaacccattgccttaaggttttaggtaagagtgtgatgtctctc 54017634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 54936263 - 54936313
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  54936263 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 54936313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 921 - 1026
Target Start/End: Original strand, 922447 - 922552
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggt 1020  Q
    |||||||||  || ||| ||| |||||| || ||||||||||||||||||||||| |||| || ||||| |||||||| | |||||||| ||||| || |    
T  922447 actagaaatgaagcaaacgttagatatagaagagaggagacccataaacccattgtcttaggggtttggataagagtgtggtgtctctcttttagcggat 922546  T
Q  1021 cctaga 1026  Q
    ||||||    
T  922547 cctaga 922552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 920 - 1009
Target Start/End: Original strand, 11196960 - 11197053
Alignment:
Q  920 aactagaaatagaggaaaagttggatatataaaagag----gagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| ||||||| |||||||||||| |||||    ||||||| |||||||||||||||| | |||| |||||||||| | ||||||||    
T  11196960 aactagaaatggaggaaacgttggatatatataagagagaggagacccttaaacccattgccttaggattttaggtaagagtgaggtgtctctc 11197053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 961 - 1009
Target Start/End: Original strand, 44620422 - 44620470
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  44620422 cccataaacccattgccttaaggttttgggtaagagtgtgatgtttctc 44620470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 943 - 998
Target Start/End: Original strand, 1868102 - 1868157
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||| |||||  |||||||||||||||||||||| ||||||||||||||||    
T  1868102 gatatataagagagggaacccataaacccattgccttaaagttttgggtaagagtg 1868157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 25483406 - 25483453
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  25483406 ccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 25483453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 49302973 - 49303012
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49302973 gacccataaacccattgccttaaggttttgggtaagagtg 49303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 15841453 - 15841407
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15841453 cataaacacattgccttaaggttttgggtaagagtgtgatgtctctc 15841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 18932838 - 18932788
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  18932838 gacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctc 18932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 36629304 - 36629354
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  36629304 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 36629354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 55933213 - 55933163
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  55933213 gacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctc 55933163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 1731736 - 1731697
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  1731736 gacccataaaccaattgccttaaggttttgggtaagagtg 1731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 3340874 - 3340913
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  3340874 gacccataaacccactgccttaaggttttgggtaagagtg 3340913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 963 - 998
Target Start/End: Complemental strand, 4955402 - 4955367
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||    
T  4955402 cataaacccattgccttaaggttttgggtaagagtg 4955367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 22183353 - 22183314
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  22183353 gacccataaacccattgccttaaggttttggataagagtg 22183314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 31691219 - 31691258
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  31691219 gacccataaactcattgccttaaggttttgggtaagagtg 31691258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 41370424 - 41370463
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  41370424 gacccataaacccattgccttaaagttttgggtaagagtg 41370463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 960 - 998
Target Start/End: Original strand, 3271855 - 3271893
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3271855 acccataaacctattgccttaaggttttgggtaagagtg 3271893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 23817766 - 23817720
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  23817766 cataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 23817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 32941208 - 32941162
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||    
T  32941208 cataaactcattgccttaaggttttgggtaagagtgtgacgtctctc 32941162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 34646734 - 34646688
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  34646734 cataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 34646688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 49880227 - 49880277
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||| ||||||||||||||||||||||| | | ||||||||    
T  49880227 gacccataaacccactgccttaaggttttgggtaagagcgtggtgtctctc 49880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 50002493 - 50002543
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||||||    
T  50002493 gacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctc 50002543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 944 - 998
Target Start/End: Original strand, 51681590 - 51681644
Alignment:
Q  944 atatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||| ||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  51681590 atatataagagaggggactcatatacccattgccttaagattttgggtaagagtg 51681644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1009
Target Start/End: Complemental strand, 53468124 - 53468039
Alignment:
Q  923 tagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| ||| ||| |||| ||||||||| |||||||||||||||| |||||  ||||| |||||| |||| ||| ||||||||||    
T  53468124 tagaaatggagcaaatgttgaatatataaa-gaggagacccataaactcattgttttaagcttttggataagtgtgtgatgtctctc 53468039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 54108980 - 54109029
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  54108980 gacccataaacccattgccttaa-gttttgggtaagagtgtggtgtctctc 54109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 965 - 1009
Target Start/End: Complemental strand, 39792943 - 39792899
Alignment:
Q  965 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||    
T  39792943 taaactcattgccttaaggttttgggtaagagtgtggtgtctctc 39792899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 969 - 1009
Target Start/End: Complemental strand, 54343087 - 54343047
Alignment:
Q  969 cccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  54343087 cccattgccttaaggttttgggtaagagtgtggtgtctctc 54343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 2741138 - 2741177
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  2741138 gacccataactccattgccttaaggttttgggtaagagtg 2741177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 958 - 997
Target Start/End: Original strand, 36572085 - 36572124
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagt 997  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  36572085 agacccataaatccattgccttaaggttttgggttagagt 36572124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 36608747 - 36608700
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||| |||||||||||||||||||||| | ||||||||    
T  36608747 ccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctc 36608700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 22028050 - 22028000
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||  |||||||||||||||||||||||| || | ||||||||    
T  22028050 gacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctc 22028000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 22028458 - 22028408
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||| ||||| |||||||||||||||| | ||||||||    
T  22028458 gacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctc 22028408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 45496872 - 45496922
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||| |||||| ||||| |||||||||||||||||||||| | ||||||||    
T  45496872 gacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctc 45496922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 51768145 - 51768099
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  51768145 cataaactcattgtcttaaggttttgggtaaaagtacgatgtctctc 51768099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 964 - 1009
Target Start/End: Original strand, 52884767 - 52884813
Alignment:
Q  964 ataaacccattgccttaaggtttt-gggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  52884767 ataaacccattgccttaaggttttggggtaagagtgtggtgtctctc 52884813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 962 - 1007
Target Start/End: Original strand, 10245989 - 10246034
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctc 1007  Q
    |||||||||||  |||||||||||||||||||||||| | ||||||    
T  10245989 ccataaacccaaagccttaaggttttgggtaagagtgtggtgtctc 10246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 964 - 1009
Target Start/End: Complemental strand, 16888900 - 16888855
Alignment:
Q  964 ataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||||||    
T  16888900 ataaactcattgtcttacggttttgggtaagagtgtgatgtctctc 16888855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 959 - 1008
Target Start/End: Original strand, 18879873 - 18879922
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||| ||||||| ||| ||||||||||||||||||||||| || ||||||    
T  18879873 gacctataaacctatttccttaaggttttgggtaagagtgtgacgtctct 18879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 20826285 - 20826334
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||| |||||||  |||| |||||||||| ||||||||||    
T  20826285 acccataaacccatagccttaacattttaggtaagagtgtgatgtctctc 20826334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 8e-27; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 884 - 1009
Target Start/End: Original strand, 53595951 - 53596077
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtcc-atgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| || |||  ||||||||| |  || ||||||||||||| ||| ||||||||||||| ||||||||||||||||||| || |||||||    
T  53595951 tgttggaaatcaagtgcgagtgattatgtcccacattgactagaaatagagaaaatgttggatatataagagaggagacccataaacccgttaccttaag 53596050  T
Q  983 gttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| | ||||||||    
T  53596051 gttttgggtaagagtgtggtgtctctc 53596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 884 - 1009
Target Start/End: Original strand, 53596266 - 53596392
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtcc-atgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| || |||  ||||||||| |  || ||||||||||||| ||| ||||||||||||| ||||||||||||||||||| || |||||||    
T  53596266 tgttggaaatcaagtgcgagtgattatgtcccacattgactagaaatagagaaaatgttggatatataagagaggagacccataaacccgttaccttaag 53596365  T
Q  983 gttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| | ||||||||    
T  53596366 gttttgggtaagagtgtggtgtctctc 53596392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 884 - 998
Target Start/End: Complemental strand, 48127982 - 48127867
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtc-catgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||||||||||  |||||||| ||  | ||||| |||| | ||||| ||| ||||||||| |||||||||||||||||||||||| ||||     
T  48127982 tgttggaaatcaaatgtgagtgattatgtcacacatcaactataaatggtggaaacgtttgatatataagagaggagacccataaacccattgctttaat 48127883  T
Q  983 gttttgggtaagagtg 998  Q
    ||||||| ||||||||    
T  48127882 gttttggataagagtg 48127867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 32589770 - 32589820
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32589770 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 32589820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 922 - 998
Target Start/End: Original strand, 16143468 - 16143544
Alignment:
Q  922 ctagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||| ||| ||| ||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  16143468 ctagaaatggagcaaatgttggatatataagagacgagacccataagctcattgccttaaagttttgggtaagagtg 16143544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 957 - 1009
Target Start/End: Original strand, 52634740 - 52634792
Alignment:
Q  957 gagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  52634740 gagacccataaacccattgccttaaggttttgggtaagagtgtgacgtctctc 52634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 942 - 1008
Target Start/End: Complemental strand, 54017656 - 54017590
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||||| |||||  | ||||||||||||||||||||||||||||||||||||| | |||||||    
T  54017656 ggatatataagagagggaatccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 54017590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 22303750 - 22303711
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22303750 gacccataaacccattgccttaaggttttgggtaagagtg 22303711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 1634405 - 1634355
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  1634405 gacccataaacccattggcttaaggttttgggtaagagtgcggtatctctc 1634355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 12114653 - 12114603
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  12114653 gacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctc 12114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 22304046 - 22303996
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  22304046 gacccataaacccattgccttaaggttttggataagagtgtggtgtctctc 22303996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 22304636 - 22304686
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  22304636 gacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctc 22304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 921 - 991
Target Start/End: Complemental strand, 43978704 - 43978634
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggt 991  Q
    ||||| ||| |||||||  |||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  43978704 actaggaatggaggaaacattggatatataagagaggagactcatatacctattgccttaaggttttgggt 43978634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 943 - 1000
Target Start/End: Complemental strand, 17735098 - 17735041
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcg 1000  Q
    ||||||||| |||||  |||||||||| ||||| ||||||||||||||||||||||||    
T  17735098 gatatataagagagggaacccataaactcattgacttaaggttttgggtaagagtgcg 17735041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 943 - 1000
Target Start/End: Complemental strand, 19036367 - 19036310
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcg 1000  Q
    ||||||||| |||||  |||||||||| ||||| ||||||||||||||||||||||||    
T  19036367 gatatataagagagggaacccataaactcattgacttaaggttttgggtaagagtgcg 19036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 959 - 1008
Target Start/End: Original strand, 39389137 - 39389186
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  39389137 gacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 39389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 960 - 1009
Target Start/End: Complemental strand, 43346881 - 43346832
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  43346881 acccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 43346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 942 - 998
Target Start/End: Complemental strand, 17732012 - 17731956
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| | |||  ||||||||||||||||||||||||||||| |||||||||    
T  17732012 ggatatataagaaagggaacccataaacccattgccttaaggttttgagtaagagtg 17731956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 942 - 998
Target Start/End: Complemental strand, 19033243 - 19033187
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| | |||  ||||||||||||||||||||||||||||| |||||||||    
T  19033243 ggatatataagaaagggaacccataaacccattgccttaaggttttgagtaagagtg 19033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 959 - 995
Target Start/End: Complemental strand, 41359856 - 41359820
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaaga 995  Q
    |||||||||||||||||||||||||||||||||||||    
T  41359856 gacccataaacccattgccttaaggttttgggtaaga 41359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 29644993 - 29644954
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  29644993 gacccataaacccattgtcttaaggttttgggtaagagtg 29644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 958 - 1009
Target Start/End: Complemental strand, 32462992 - 32462941
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||| |||||||||||||||||||||||||| ||||||||| | ||||||||    
T  32462992 agactcataaacccattgccttaaggttttgagtaagagtgtggtgtctctc 32462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 39935043 - 39934996
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  39935043 ccataaacccattgccttaaagttttgagtaagagtgtgatgtctctc 39934996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 47964609 - 47964570
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  47964609 gacccataaacctattgccttaaggttttgggtaagagtg 47964570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 956 - 1043
Target Start/End: Original strand, 53596539 - 53596626
Alignment:
Q  956 ggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgtccatctcattgcct 1043  Q
    |||||||||||||||||||| |||||| |||| |||||||||| | ||||||||   ||| |||||||||| ||  | ||||||||||    
T  53596539 ggagacccataaacccattgacttaagattttaggtaagagtgtggtgtctctctcatagcgggtcctagacgtttagctcattgcct 53596626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 944 - 998
Target Start/End: Complemental strand, 16871065 - 16871011
Alignment:
Q  944 atatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||| |||||  |||||||||| ||||||||||||||||| ||||||||||    
T  16871065 atatataagagagggaacccataaactcattgccttaaggttttaggtaagagtg 16871011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 29644671 - 29644633
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  29644671 acccataaacccattgtcttaaggttttgggtaagagtg 29644633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 35946589 - 35946639
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| ||||||||||||||||||||| |||| | ||||||||    
T  35946589 gacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctctc 35946639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 37990726 - 37990680
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  37990726 cataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 37990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 42342479 - 42342429
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||||| |||||||||||||||||||||| || |||||||    
T  42342479 gacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctctc 42342429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 962 - 1004
Target Start/End: Complemental strand, 46546413 - 46546371
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgt 1004  Q
    ||||||||||||||||||||||||||| ||||||||| |||||    
T  46546413 ccataaacccattgccttaaggttttgtgtaagagtgtgatgt 46546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 952 - 1008
Target Start/End: Complemental strand, 3135552 - 3135496
Alignment:
Q  952 aagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||  ||||||||||||||||||||||||||| | |||||||| | |||||||    
T  3135552 aagaggacccccataaacccattgccttaaggttttagataagagtgtggtgtctct 3135496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 959 - 1011
Target Start/End: Complemental strand, 54018289 - 54018237
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcat 1011  Q
    |||||||||||| |  |||||||||||||||||||||||| | ||||||||||    
T  54018289 gacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcat 54018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 4823722 - 4823761
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  4823722 gacccataaactcattgccttaagattttgggtaagagtg 4823761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 33803343 - 33803304
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  33803343 gacccataaacccattgcattaaggtattgggtaagagtg 33803304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 958 - 1009
Target Start/End: Complemental strand, 39336062 - 39336011
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||| ||||||  |||||||||||||||||||||||||||| | ||||||||    
T  39336062 agactcataaaatcattgccttaaggttttgggtaagagtgtggtgtctctc 39336011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 998
Target Start/End: Complemental strand, 42342177 - 42342142
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42342177 cataaactcattgccttaaggttttgggtaagagtg 42342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 931 - 994
Target Start/End: Complemental strand, 43978988 - 43978925
Alignment:
Q  931 gaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaag 994  Q
    ||||||| ||||| | ||||| ||||||| ||| || ||| |||||||||||||||||||||||    
T  43978988 gaggaaacgttgggtgtataagagaggagccccgtatacctattgccttaaggttttgggtaag 43978925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 45395741 - 45395694
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||| ||||| |||||||||||||||| | ||||||||    
T  45395741 ccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctc 45395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 52635007 - 52635046
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  52635007 gacccataaactcattgccttaagattttgggtaagagtg 52635046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 15772921 - 15772971
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||| |||||||||||| |||||||| | ||||||||    
T  15772921 gacccataaactcattgctttaaggttttggataagagtgtggtgtctctc 15772971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 25739516 - 25739466
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||| || |||||||||||||||||| || |||||||    
T  25739516 gacccataaactcattgcttttaggttttgggtaagagtgtgacgtctctc 25739466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 37991068 - 37991018
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||| |||||| ||| |||||||||||||||||||||||| | ||||||||    
T  37991068 gacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctc 37991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 960 - 1009
Target Start/End: Complemental strand, 3135163 - 3135114
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| |||| |||||||||| ||||||||| | ||||||||    
T  3135163 acccataaacccactgccataaggttttgagtaagagtgtggtgtctctc 3135114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 8327972 - 8328021
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||  | ||||||||||||||||||||||||| | ||||||||    
T  8327972 acccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctctc 8328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 971 - 1008
Target Start/End: Original strand, 15773271 - 15773308
Alignment:
Q  971 cattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  15773271 cattgccttaaagttttgggtaagagtgtgatgtctct 15773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 968 - 1009
Target Start/End: Original strand, 31190085 - 31190126
Alignment:
Q  968 acccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||| |||||||||||||||||||||||| | ||||||||    
T  31190085 acccatagccttaaggttttgggtaagagtgtggtgtctctc 31190126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 921 - 966
Target Start/End: Complemental strand, 40195949 - 40195904
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccata 966  Q
    ||||| ||| ||||||| ||||||||||||| ||||||||||||||    
T  40195949 actaggaatggaggaaacgttggatatataagagaggagacccata 40195904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 921 - 1029
Target Start/End: Original strand, 13042568 - 13042676
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggt 1020  Q
    ||||||||||||| |||  || ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||  |||| | ||    
T  13042568 actagaaatagagcaaacattagatatataagagaggagacccataaacccattgccttaaggttttggataagagtgtggtgtctctctcttagcgtgt 13042667  T
Q  1021 cctagatgt 1029  Q
    |||||||||    
T  13042668 cctagatgt 13042676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 921 - 1029
Target Start/End: Original strand, 13112566 - 13112674
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggt 1020  Q
    ||||||||||||| |||  || ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| | ||||| ||  |||| | ||    
T  13112566 actagaaatagagcaaacattagatatataagagaggagacccataaacccattgtcttaaggttttggataagagtgtggtgtctttctcttagcgtgt 13112665  T
Q  1021 cctagatgt 1029  Q
    |||||||||    
T  13112666 cctagatgt 13112674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 26074679 - 26074729
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26074679 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 26074729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 921 - 996
Target Start/End: Original strand, 13043025 - 13043100
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagag 996  Q
    ||||||||||||| |||  |||||||||||| |||||||||||||||||||||   |||| | |||||||||||||    
T  13043025 actagaaatagagcaaacattggatatataagagaggagacccataaacccatcatcttaggattttgggtaagag 13043100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 921 - 996
Target Start/End: Original strand, 13113021 - 13113096
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagag 996  Q
    ||||||||||||| |||  |||||||||||| |||||||||||||||||||||   |||| | |||||||||||||    
T  13113021 actagaaatagagcaaacattggatatataagagaggagacccataaacccatcatcttaggattttgggtaagag 13113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 18603211 - 18603172
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18603211 gacccataaacccattgccttaaggttttgggtaagagtg 18603172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 32487460 - 32487499
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32487460 gacccataaacccattgccttaaggttttgggtaagagtg 32487499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 41170701 - 41170740
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41170701 gacccataaacccattgccttaaggttttgggtaagagtg 41170740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 9498745 - 9498695
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  9498745 gacccataaacccattgccttaagattttgggtaagagtgtggtgtctctc 9498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 26074237 - 26074187
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  26074237 gacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctc 26074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 40296406 - 40296356
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  40296406 gacccataaacccattgccttgaggttttgggtaagagtgtggtgtctctc 40296356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 965 - 1009
Target Start/End: Original strand, 6500523 - 6500567
Alignment:
Q  965 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  6500523 taaacccattgccttaaggttttgggtaagagtgtggtgtctctc 6500567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 958 - 998
Target Start/End: Complemental strand, 34753117 - 34753077
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  34753117 agacccataaaccgattgccttaaggttttgggtaagagtg 34753077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 958 - 1009
Target Start/End: Complemental strand, 3295107 - 3295056
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||| |||||||||||| ||||| | ||||||||    
T  3295107 agacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctc 3295056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 11417065 - 11417018
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  11417065 ccataaacccattgccttaaggttttgtgtaagagtgtgatctctctc 11417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 943 - 1026
Target Start/End: Original strand, 13042305 - 13042388
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 1026  Q
    |||||||||  ||||||||||| |||||||| | ||||  ||||| |||||||||| ||||||||||  |||| ||||||||||    
T  13042305 gatatataagtgaggagacccaaaaacccatcgtcttagagtttttggtaagagtgtgatgtctctctcttagcgggtcctaga 13042388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 943 - 1026
Target Start/End: Original strand, 13112299 - 13112382
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 1026  Q
    |||||||||  ||||||||||| |||||||| | ||||  ||||| |||||||||| ||||||||||  |||| ||||||||||    
T  13112299 gatatataagtgaggagacccaaaaacccatcgtcttagagtttttggtaagagtgtgatgtctctctcttagcgggtcctaga 13112382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 36521987 - 36521948
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  36521987 gacccataaaccaattgccttaaggttttgggtaagagtg 36521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 624263 - 624313
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  624263 gacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctc 624313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6500889 - 6500939
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  6500889 gacccataaactcattgccttaaggttttggataagagtgtggtgtctctc 6500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 25328002 - 25328052
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| | ||||||||||||||||||||||||| | ||||||||    
T  25328002 gacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctc 25328052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 993
Target Start/End: Complemental strand, 26075253 - 26075219
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaa 993  Q
    |||||||||||||||||||||||||||||||||||    
T  26075253 gacccataaacccattgccttaaggttttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 957 - 1009
Target Start/End: Original strand, 35150071 - 35150123
Alignment:
Q  957 gagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||| ||||||||||||||||| |||| | ||||||||    
T  35150071 gagacccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctc 35150123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 971 - 1023
Target Start/End: Complemental strand, 36389359 - 36389307
Alignment:
Q  971 cattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcct 1023  Q
    |||||||||| ||||||||||||  ||| |||||||||| |||||||||||||    
T  36389359 cattgccttagggttttgggtaacggtgtgatgtctctcttttagtgggtcct 36389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 13415851 - 13415812
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  13415851 gacccataaacctattaccttaaggttttgggtaagagtg 13415812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 15370469 - 15370508
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  15370469 gacccataaacccatagccttaaggttttgcgtaagagtg 15370508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 36568658 - 36568619
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  36568658 gacccgtaaacccattgccttaaggtttttggtaagagtg 36568619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 3295435 - 3295386
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  3295435 gacccataaaccaattgccttaaggtttt-ggtaagagtgtgttgtctctc 3295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 972 - 1026
Target Start/End: Original strand, 13112782 - 13112836
Alignment:
Q  972 attgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 1026  Q
    |||||||||||||||||||||||| || | ||||||||  |||| ||||||||||    
T  13112782 attgccttaaggttttgggtaagaatgtggtgtctctctcttagcgggtcctaga 13112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 15370166 - 15370216
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| |||  |||||||||||||||||||||||| | ||||||||    
T  15370166 gacccataaatccacagccttaaggttttgggtaagagtgtggtgtctctc 15370216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 24489296 - 24489258
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  24489296 acccataaacccattgccttaagattttgcgtaagagtg 24489258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 36522328 - 36522278
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||| |||||||||||  |||||||||||||||||||||| | ||||||||    
T  36522328 gaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctc 36522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 41632849 - 41632899
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||| ||| ||||| ||||||||||||||| | ||||||||    
T  41632849 gacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctc 41632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 942 - 995
Target Start/End: Original strand, 14168984 - 14169037
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaaga 995  Q
    |||||||||| |||||  |||||||| | ||||||||||| |||||||||||||    
T  14168984 ggatatataagagagggaacccataagctcattgccttaaagttttgggtaaga 14169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 953 - 998
Target Start/End: Complemental strand, 36389073 - 36389028
Alignment:
Q  953 agaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||| || ||||||| |||||||||| ||||||    
T  36389073 agaggagacccataaactcagtgccttagggttttgggtcagagtg 36389028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 942 - 995
Target Start/End: Original strand, 41341505 - 41341558
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaaga 995  Q
    |||||||||| |||||  ||||||| || ||||||||||||||||| |||||||    
T  41341505 ggatatataagagagggaacccatacactcattgccttaaggtttttggtaaga 41341558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1008
Target Start/End: Complemental strand, 42405683 - 42405638
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||| | ||||||||||||||||||||||||| | |||||||    
T  42405683 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctct 42405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 5e-25; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 884 - 1029
Target Start/End: Complemental strand, 13792661 - 13792517
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtcc-atgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| ||||||  ||||||||| |  | |||||||||| |||||||  || ||||||||| ||||||||||| || |||||||| ||| ||    
T  13792661 tgttggaaatcaagtgtgagtgattatgtcccacatcaactagaaatggaggaaatatttgatatataagagaggagacccgtacacccattgacttgag 13792562  T
Q  983 gttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 1029  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||    
T  13792561 gttttgggtaagagtgtgatgtctct--tttagcgggtcctagatgt 13792517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 921 - 1009
Target Start/End: Original strand, 28226366 - 28226454
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||| |||| |||||| |||||||||| | ||||||||    
T  28226366 actagaaatggaggaaacgttggatatataagagaggagacccataaacacattgtcttagggttttaggtaagagtgtggtgtctctc 28226454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 921 - 991
Target Start/End: Original strand, 19548173 - 19548243
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggt 991  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| | | | || |||||||||||||||    
T  19548173 actagaaatagaggaaatgttggatatataagagaggagacccatatatctaatgtcttaaggttttgggt 19548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 36178696 - 36178646
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  36178696 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 36178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 921 - 1009
Target Start/End: Complemental strand, 35448744 - 35448656
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| |||||   |||||||||  ||||| | |||||||||| ||||||||    
T  35448744 actagaaatagaggaaacgtttgatatataagagaggagacctataaattaattgccttagagtttttgttaagagtgcggtgtctctc 35448656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 14745385 - 14745346
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14745385 gacccataaacccattgccttaaggttttgggtaagagtg 14745346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 14745758 - 14745719
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14745758 gacccataaacccattgccttaaggttttgggtaagagtg 14745719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 15880330 - 15880369
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15880330 gacccataaacccattgccttaaggttttgggtaagagtg 15880369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 884 - 998
Target Start/End: Complemental strand, 30220048 - 30219933
Alignment:
Q  884 tgttggaaatcaaatgtgagcaattatgtcc-atgttaactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaag 982  Q
    ||||||||||||| ||||||| ||||||||| |  |  ||||||| | ||||||| ||||||||  ||| |||||||||||||||||| |||| |||| |    
T  30220048 tgttggaaatcaagtgtgagcgattatgtcccacatcgactagaactggaggaaatgttggatacttaagagaggagacccataaaccaattgtcttagg 30219949  T
Q  983 gttttgggtaagagtg 998  Q
    |||||| ||| |||||    
T  30219948 gttttgtgtaggagtg 30219933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 35580812 - 35580765
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  35580812 ccataaacccattgccttaaggttttgggtaagagtgcggcgtctctc 35580765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6421798 - 6421848
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  6421798 gacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctc 6421848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 28254328 - 28254278
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  28254328 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 28254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 940 - 1009
Target Start/End: Original strand, 28226703 - 28226771
Alignment:
Q  940 ttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||||||||| | ||||||||    
T  28226703 ttggatatataagagaggagactcataaacccattgtctt-aggtttttggtaagagtgtggtgtctctc 28226771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 961 - 1009
Target Start/End: Original strand, 23346305 - 23346353
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  23346305 cccataaacccatagccttaaggttttcggtaagagtgtgatgtctctc 23346353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 959 - 1003
Target Start/End: Complemental strand, 31468841 - 31468797
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatg 1003  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  31468841 gacccataaactcattgccttaaggttttgggtaagagtgtgatg 31468797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 962665 - 962704
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  962665 gacccataaacccattgtcttaaggttttgggtaagagtg 962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 29874114 - 29874075
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29874114 gacccataaacccattgccttaaggttttggataagagtg 29874075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 37106255 - 37106294
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37106255 gacccataaacccatttccttaaggttttgggtaagagtg 37106294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 963 - 998
Target Start/End: Complemental strand, 37895148 - 37895113
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||    
T  37895148 cataaacccattgccttaaggttttgggtaagagtg 37895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 5542716 - 5542666
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  5542716 gacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctc 5542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6422177 - 6422227
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||| ||||||||||||| |||||||||| | ||||||||    
T  6422177 gacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctc 6422227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 15511586 - 15511536
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||    
T  15511586 gacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctc 15511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1013
Target Start/End: Original strand, 30323531 - 30323585
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcattt 1013  Q
    |||| |||||| |||||||||||||||||||||||||||| |  |||||||||||    
T  30323531 gacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctcattt 30323585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 33561542 - 33561492
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||| ||||||    
T  33561542 gacccataaactcattgtcttaaggttttgggtaagagtgtgatatctctc 33561492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 36178261 - 36178223
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  36178261 acccataaacccattgccttaagattttgggtaagagtg 36178223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 37105991 - 37106041
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  37105991 gacccataaactcattgccttaagattttgggtaagagtgtggtgtctctc 37106041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 964 - 1009
Target Start/End: Original strand, 3672773 - 3672818
Alignment:
Q  964 ataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgtctctc 3672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 959 - 996
Target Start/End: Complemental strand, 35580531 - 35580494
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagag 996  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35580531 gacccataaactcattgccttaaggttttgggtaagag 35580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6713043 - 6713094
Alignment:
Q  959 gacccataaacccattgccttaaggtttt-gggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| ||||| |||||||||| ||||||||||| ||||||||||    
T  6713043 gacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctc 6713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 958 - 1009
Target Start/End: Original strand, 29676974 - 29677025
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||| |||  ||||||||| | ||||||||    
T  29676974 agacccataaacccattgccttaaggctttaagtaagagtgtggtgtctctc 29677025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 990
Target Start/End: Original strand, 31385804 - 31385835
Alignment:
Q  959 gacccataaacccattgccttaaggttttggg 990  Q
    ||||||||||||||||||||||||||||||||    
T  31385804 gacccataaacccattgccttaaggttttggg 31385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 997
Target Start/End: Original strand, 33731718 - 33731753
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagt 997  Q
    ||||||||| ||||||||||||||||||||||||||    
T  33731718 ccataaacctattgccttaaggttttgggtaagagt 33731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 36005971 - 36005932
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  36005971 gacccataaactcattgccttaaggttttgggtaaaagtg 36005932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 998
Target Start/End: Complemental strand, 36178356 - 36178321
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||| ||||||||||||||||||||||    
T  36178356 cataaacccattgtcttaaggttttgggtaagagtg 36178321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 41283566 - 41283527
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  41283566 gacccataaactcattgccttaaggttttaggtaagagtg 41283527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 42514716 - 42514755
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  42514716 gacccataaacccatcgccttaagattttgggtaagagtg 42514755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 962 - 1008
Target Start/End: Complemental strand, 5543086 - 5543040
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  5543086 ccataaacctattgccttaagattttgggtaagagtgtggtgtctct 5543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 6421456 - 6421502
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| ||||||||| |||||||||||||||||| | ||||||||    
T  6421456 cataaactcattgccttgaggttttgggtaagagtgtggtgtctctc 6421502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 6421693 - 6421743
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||| || ||||||||||||||||||| | ||||||||    
T  6421693 gacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctc 6421743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Complemental strand, 29873624 - 29873578
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||| ||||||||| || |||||||    
T  29873624 cataaactcattgccttaaggttttgagtaagagtgtgacgtctctc 29873578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 33348326 - 33348288
Alignment:
Q  225 aaatgttgcttgcttgcttcttccaatcatagatggcag 263  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  33348326 aaatgttgctttcttgcttcttcctatcatagatggcag 33348288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 997
Target Start/End: Complemental strand, 38796711 - 38796673
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagt 997  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  38796711 gacccataaacctaatgccttaaggttttgggtaagagt 38796673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 40679719 - 40679681
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  40679719 acccataaacccatcgccttaagattttgggtaagagtg 40679681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 961 - 998
Target Start/End: Complemental strand, 28531403 - 28531366
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  28531403 cccataaactcattgccttaagattttgggtaagagtg 28531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 3e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 373 - 534
Target Start/End: Complemental strand, 32153256 - 32153097
Alignment:
Q  373 agacttaccgctttccctgatgctgcctcatatgtcgtcaagatatatttttcataatatgcgcttcaaattcagtacccctgaaaaatagaaaacaggc 472  Q
    |||||||| |||| |||| ||||||| | |||||| |||||  ||||||||||||||||||| |||||||||||||  |  || |||||| ||| ||| |    
T  32153256 agacttactgcttgccctaatgctgcttaatatgttgtcaa--tatatttttcataatatgcacttcaaattcagtttctttggaaaataaaaagcagtc 32153159  T
Q  473 atcgacgaataaaagatgaaacaacactagtgcactaacacaaattcgtatgccatataaat 534  Q
    |||| ||||||||||| |   ||  ||| ||||| ||||||||||| ||||||||| |||||    
T  32153158 atcggcgaataaaagacgggccactactggtgcattaacacaaatttgtatgccatgtaaat 32153097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 931 - 991
Target Start/End: Complemental strand, 5981852 - 5981793
Alignment:
Q  931 gaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggt 991  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  5981852 gaggaaacgttggatatataagagaggggacccataaa-ccattgccttaaggttttgggt 5981793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 961 - 1009
Target Start/End: Original strand, 30441154 - 30441202
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30441154 cccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 30441202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 3038381 - 3038342
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3038381 gacccataaacccattgccttaaggttttgggtaagagtg 3038342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 5915934 - 5915984
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5915934 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 5915984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 30359338 - 30359388
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  30359338 gacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 30359388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 147888 - 147937
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  147888 acccataaacctattgccttaaggttttgggtaagagtgtggtgtctctc 147937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 921 - 1026
Target Start/End: Complemental strand, 3671270 - 3671165
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggt 1020  Q
    ||||| |||| |||||| ||||||||||||| |||||||| ||||||||| | ||||||| |||||||| ||| |||  | ||||||||  |||| ||||    
T  3671270 actaggaatataggaaacgttggatatataagagaggagaaccataaacctactgccttagggttttggataatagtttggtgtctctctcttagcgggt 3671171  T
Q  1021 cctaga 1026  Q
    | ||||    
T  3671170 cttaga 3671165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 959 - 1008
Target Start/End: Complemental strand, 9483278 - 9483229
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  9483278 gacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 9483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 921 - 989
Target Start/End: Complemental strand, 3670928 - 3670860
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgg 989  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||||||||| ||| | ||||| ||||||||    
T  3670928 actagaaatggaggaaacgttggatatataagagatgagacccataaatccactaccttagggttttgg 3670860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 32640623 - 32640584
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32640623 gaccgataaacccattgccttaaggttttgggtaagagtg 32640584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 40518138 - 40518177
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  40518138 gacccataaacccaatgccttaaggttttgggtaagagtg 40518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 3669758 - 3669804
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  3669758 cataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 3669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 3670127 - 3670177
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| ||| ||||||||||||||||||||||| | ||||||||    
T  3670127 gacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctc 3670177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 33113458 - 33113408
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  33113458 gacccataaactcattgccttaagattttgggtaagagtgtggtgtctctc 33113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 34834947 - 34834993
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  34834947 cataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 34834993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 6651562 - 6651611
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||  |||||||||||||||||||||||||||| | ||||||||    
T  6651562 acccataaattcattgccttaaggttttgggtaagagtgtggtgtctctc 6651611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 12156745 - 12156704
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgt 1004  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  12156745 cataaacccattgtcttaaggttttgggtaagagtgtgatgt 12156704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 957 - 1009
Target Start/End: Complemental strand, 4154374 - 4154322
Alignment:
Q  957 gagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||    
T  4154374 gagacccataaactcattgccttaatattttgggtaagtgtgtgatgtctctc 4154322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 958 - 998
Target Start/End: Complemental strand, 18371752 - 18371713
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  18371752 agacccataaacccat-gccttaaggttttgggtaagagtg 18371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 70365 - 70326
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  70365 gacccataaacccactgccttaaggttttaggtaagagtg 70326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 147518 - 147557
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  147518 gacccataaacctattgccttaaagttttgggtaagagtg 147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 8918855 - 8918816
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  8918855 gacccataaacctattgacttaaggttttgggtaagagtg 8918816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 998
Target Start/End: Original strand, 9507853 - 9507888
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||    
T  9507853 cataaacccattaccttaaggttttgggtaagagtg 9507888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 34835276 - 34835315
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  34835276 gacccataaactcattgccttaaagttttgggtaagagtg 34835315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 34835542 - 34835581
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  34835542 gacccataaactcattgccttaaagttttgggtaagagtg 34835581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 34835808 - 34835847
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  34835808 gacccataaactcattgccttaaagttttgggtaagagtg 34835847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 40518649 - 40518688
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  40518649 gacccataaacccaatgacttaaggttttgggtaagagtg 40518688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 958 - 1008
Target Start/End: Original strand, 5274841 - 5274891
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||||||  |||||||||||| ||||| ||||||||| |||||||||    
T  5274841 agacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 5274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 997
Target Start/End: Original strand, 9309046 - 9309084
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagt 997  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  9309046 gacccataaacccattgcctaaaggttttgggcaagagt 9309084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 20870664 - 20870614
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||| ||||||||| |||||| |||||||| | ||||||||    
T  20870664 gacccataaacccactgccttaagattttggataagagtgtggtgtctctc 20870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 960 - 1009
Target Start/End: Original strand, 6731963 - 6732012
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||  |||||||||||||||||| ||||||||| | ||||||||    
T  6731963 acccataaattcattgccttaaggttttgagtaagagtgtggtgtctctc 6732012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 936 - 1009
Target Start/End: Original strand, 11576087 - 11576160
Alignment:
Q  936 aaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| ||||||||| ||||   | | ||| ||||| ||||||||||||||  ||||||||||    
T  11576087 aaagttggatatataagagaggagacacatatgtctaatgctttaagattttgggtaagagtctgatgtctctc 11576160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 960 - 1009
Target Start/End: Complemental strand, 45122147 - 45122098
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||| ||||  |||||||||||||||||||||| | ||||||||    
T  45122147 acccataaactcattttcttaaggttttgggtaagagtgtggtgtctctc 45122098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 17294644 - 17294694
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17294644 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 17294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 958 - 1009
Target Start/End: Complemental strand, 26661990 - 26661939
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  26661990 agacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctc 26661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 26661613 - 26661563
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26661613 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 26661563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 34364992 - 34365042
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  34364992 gacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 34365042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 997
Target Start/End: Complemental strand, 44290549 - 44290511
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagt 997  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44290549 gacccataaacccattgccttaaggttttgggtaagagt 44290511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 965 - 1009
Target Start/End: Original strand, 9955982 - 9956026
Alignment:
Q  965 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  9955982 taaaccaattgccttaaggttttgggtaagagtgtgatgtctctc 9956026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 921 - 1009
Target Start/End: Complemental strand, 31973464 - 31973376
Alignment:
Q  921 actagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||| ||||||  |||  |||||||| |||||| || |||| ||||  ||||||||| ||||||||||||||| ||||||||||    
T  31973464 actagaaatggaggaaccgttacatatataagagaggatacacatatacccgatgccttaagattttgggtaagagtgtgatgtctctc 31973376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 965 - 1009
Target Start/End: Original strand, 34364580 - 34364624
Alignment:
Q  965 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  34364580 taaacccatagccttaaggttttgggtaagagtgtgatgtctctc 34364624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 958 - 1009
Target Start/End: Original strand, 14318933 - 14318984
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| | ||||||||||||||||||||||||||| | ||||||||    
T  14318933 agacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctc 14318984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 32168789 - 32168750
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  32168789 gacccataaacccattgccttgaggttttgggtaagagtg 32168750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 37556181 - 37556228
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||    
T  37556181 ccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 37556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 41759553 - 41759600
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  41759553 ccataaatccattgccttaaggttttgggtaagagtgtggtgtctctc 41759600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 958 - 1009
Target Start/End: Complemental strand, 48588580 - 48588529
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||| ||||  |||||||||||||||||||||||||||||| ||||||||    
T  48588580 agacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctc 48588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 3550791 - 3550837
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||    
T  3550791 cataaacccattgccttaaagttttgggtaagagtgtggtgtctctc 3550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 11977351 - 11977397
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  11977351 cataaacctaatgccttaaggttttgggtaagagtgtgatgtctctc 11977397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 32594807 - 32594757
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| ||||| |||||||||||||||||||||| | ||||||||    
T  32594807 gacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctc 32594757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 44043863 - 44043813
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||    
T  44043863 gacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctc 44043813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 993
Target Start/End: Complemental strand, 44290916 - 44290882
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaa 993  Q
    |||||||||||||||||||||||||||||||||||    
T  44290916 gacccataaacccattgccttaaggttttgggtaa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 959 - 1008
Target Start/End: Original strand, 41157058 - 41157107
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||||| |||||| ||||||||||||||||||||| | |||||||    
T  41157058 gacccataaactcattgctttaaggttttgggtaagagtgtggtgtctct 41157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 66178 - 66139
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  66178 gacccataaacctatggccttaaggttttgggtaagagtg 66139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 3537690 - 3537651
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  3537690 gacctataaacccattggcttaaggttttgggtaagagtg 3537651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 5320056 - 5320017
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  5320056 gacccataaactcatagccttaaggttttgggtaagagtg 5320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 41157442 - 41157481
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  41157442 gacccataaacccattgcctttaggttttgagtaagagtg 41157481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 962 - 1009
Target Start/End: Complemental strand, 45494062 - 45494015
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  45494062 ccataaacccattgccttaaagttttggataagagtgtggtgtctctc 45494015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 11977015 - 11977061
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctctc 11977061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 29798270 - 29798316
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||| |||| |||||||| | ||||||||    
T  29798270 cataaacccattgccttaaggtcttggataagagtgtggtgtctctc 29798316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 960 - 998
Target Start/End: Complemental strand, 30630728 - 30630690
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  30630728 acccataaacacattgccttaaagttttgggtaagagtg 30630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 960 - 998
Target Start/End: Original strand, 34649506 - 34649544
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  34649506 acccataaacctaatgccttaaggttttgggtaagagtg 34649544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 993
Target Start/End: Original strand, 41142439 - 41142473
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaa 993  Q
    ||||||||||||||||||||||||||||| |||||    
T  41142439 gacccataaacccattgccttaaggtttttggtaa 41142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 942 - 995
Target Start/End: Complemental strand, 22605363 - 22605310
Alignment:
Q  942 ggatatataaaagaggagacccataaacccattgccttaaggttttgggtaaga 995  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  22605363 ggatatataagagtggaaacccataaacccattgccttaaggttttgggtaaga 22605310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 2377821 - 2377860
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2377821 gacccataaacccattgccttaaggttttgggtaagagtg 2377860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 962 - 1009
Target Start/End: Original strand, 3058296 - 3058343
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  3058296 ccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 3058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 3409326 - 3409376
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  3409326 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 3409376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 3415525 - 3415575
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  3415525 gacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctc 3415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 10074082 - 10074032
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  10074082 gacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctc 10074032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 10074454 - 10074404
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  10074454 gacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 10074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 16107749 - 16107795
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||    
T  16107749 cataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 16107795  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 29518570 - 29518620
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  29518570 gacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctc 29518620  T

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Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 29518987 - 29519037
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  29518987 gacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctc 29519037  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 32741246 - 32741296
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  32741246 gacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctc 32741296  T

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Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 959 - 1008
Target Start/End: Complemental strand, 2578534 - 2578485
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  2578534 gacccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 2578485  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 944 - 1009
Target Start/End: Complemental strand, 11637827 - 11637762
Alignment:
Q  944 atatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||| |||||| |||||||||||||||| |||||| |||||| |||||||| | ||||||||    
T  11637827 atatataagagaggatacccataaacccattgtcttaagattttggataagagtgtggtgtctctc 11637762  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 16454974 - 16455013
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  16454974 gacccataaacctattgccttaaggttttgggtaagagtg 16455013  T

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Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 943 - 998
Target Start/End: Complemental strand, 21130164 - 21130109
Alignment:
Q  943 gatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||||| ||||||||    
T  21130164 gatatataagagagggaacccataaatccattgccttaaggttttggataagagtg 21130109  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 963 - 998
Target Start/End: Complemental strand, 32460667 - 32460632
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||    
T  32460667 cataaacccattgccttaaggttttgggtaagagtg 32460632  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 35210271 - 35210310
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  35210271 gacccataaaaccattgccttaaggttttgggtaagagtg 35210310  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 26544116 - 26544166
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  26544116 gacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctctc 26544166  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 961 - 998
Target Start/End: Original strand, 2843624 - 2843661
Alignment:
Q  961 cccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2843624 cccataaactcattgccttaaggttttgggtaagagtg 2843661  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 960 - 1008
Target Start/End: Original strand, 1846816 - 1846864
Alignment:
Q  960 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    ||||||||| |||||||||||||||||||| |||||||| | |||||||    
T  1846816 acccataaatccattgccttaaggttttggataagagtgtggtgtctct 1846864  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 998
Target Start/End: Original strand, 1127431 - 1127466
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||| |||||||||||||||||||||||    
T  1127431 cataaacccattaccttaaggttttgggtaagagtg 1127466  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 14748429 - 14748390
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14748429 gacccataaactcattgcgttaaggttttgggtaagagtg 14748390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 998
Target Start/End: Original strand, 16454642 - 16454681
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  16454642 gacccataaacccattgccttaagattttggataagagtg 16454681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 2378193 - 2378243
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||| |||||||||||| ||||||| || | ||||||||    
T  2378193 gacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctc 2378243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 962 - 1008
Target Start/End: Complemental strand, 2578923 - 2578877
Alignment:
Q  962 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 1008  Q
    |||||||| |||| ||||||||||||||||||||||| | |||||||    
T  2578923 ccataaactcattaccttaaggttttgggtaagagtgtggtgtctct 2578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 2579963 - 2579913
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||  ||||||||||||||||||||| || | ||||||||    
T  2579963 gacccataaacccacagccttaaggttttgggtaagaatgtggtgtctctc 2579913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 3409727 - 3409777
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||| |  ||||||||||||||| | ||||||||    
T  3409727 gacccataaacccattgcctttattttttgggtaagagtgtggtgtctctc 3409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 963 - 1009
Target Start/End: Original strand, 8481997 - 8482043
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  8481997 cataaactcattgccttaagattttgggtaagagtgtggtgtctctc 8482043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 920 - 1026
Target Start/End: Complemental strand, 11638143 - 11638037
Alignment:
Q  920 aactagaaatagaggaaaagttggatatataaaagaggagacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtggg 1019  Q
    |||||||||| ||| |||  |||||||||||| |||| ||| |  || ||||||||||||| | ||||||||||||||  | ||||||||  || | |||    
T  11638143 aactagaaatggagaaaatattggatatataagagagaagatctgtatacccattgccttaggattttgggtaagagtatggtgtctctctctttgcggg 11638044  T
Q  1020 tcctaga 1026  Q
    |||||||    
T  11638043 tcctaga 11638037  T

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Target: scaffold0702 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 959 - 998
Target Start/End: Complemental strand, 605 - 566
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtg 998  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  605 gacccataaacccattgccttaaggttttgggtaagagtg 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 959 - 1009
Target Start/End: Complemental strand, 1782 - 1732
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  1782 gacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctc 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 997
Target Start/End: Complemental strand, 1193 - 1159
Alignment:
Q  963 cataaacccattgccttaaggttttgggtaagagt 997  Q
    |||||||||||||||||||||||||||||||||||    
T  1193 cataaacccattgccttaaggttttgggtaagagt 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 958 - 1009
Target Start/End: Original strand, 5048 - 5099
Alignment:
Q  958 agacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||| |||||||||| ||||||||||||||||| | ||||||||    
T  5048 agacccataaactcattgccttatggttttgggtaagagtgtggtgtctctc 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 959 - 1009
Target Start/End: Original strand, 5424 - 5474
Alignment:
Q  959 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 1009  Q
    |||||||||||||||||||||||| |||||| |||||||| | ||||||||    
T  5424 gacccataaacccattgccttaagattttggataagagtgtggtgtctctc 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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