View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9176_low_9 (Length: 238)

Name: NF9176_low_9
Description: NF9176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9176_low_9
NF9176_low_9
[»] chr6 (3 HSPs)
chr6 (31-228)||(34265005-34265202)
chr6 (35-213)||(25970863-25971063)
chr6 (35-213)||(25975303-25975503)
[»] chr4 (4 HSPs)
chr4 (31-214)||(36895495-36895678)
chr4 (36-214)||(8121132-8121310)
chr4 (34-214)||(26602254-26602435)
chr4 (35-206)||(37062483-37062654)
[»] chr3 (3 HSPs)
chr3 (35-214)||(18256321-18256499)
chr3 (34-214)||(53520909-53521089)
chr3 (35-214)||(36006273-36006452)
[»] chr5 (3 HSPs)
chr5 (34-214)||(38095355-38095535)
chr5 (42-214)||(16678617-16678789)
chr5 (34-213)||(38936163-38936336)
[»] chr1 (5 HSPs)
chr1 (34-214)||(21056889-21057069)
chr1 (31-214)||(23086035-23086219)
chr1 (34-213)||(8256842-8257021)
chr1 (35-155)||(37891373-37891493)
chr1 (147-179)||(37891507-37891539)
[»] chr7 (1 HSPs)
chr7 (34-194)||(35103059-35103216)
[»] chr2 (2 HSPs)
chr2 (36-214)||(23455543-23455719)
chr2 (36-98)||(19529193-19529255)
[»] chr8 (2 HSPs)
chr8 (35-155)||(18272929-18273049)
chr8 (42-112)||(37589688-37589758)
[»] scaffold0374 (1 HSPs)
scaffold0374 (184-214)||(2045-2075)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 34265005 - 34265202
Alignment:
Q  31 taatgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaac 130  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||    
T  34265005 taatgtaccatattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgaagaaaaggaaatccaac 34265104  T
Q  131 gtctgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctgcataacttgatgtc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34265105 gtctgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctgcataacttgatgtc 34265202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 213
Target Start/End: Original strand, 25970863 - 25971063
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| |||||||        ||||||||||||||    
T  25970863 gtaccatattaaacaattttcatgacatcgatcctgttacggaaacataacatataaatataatgacataatttattgaataaaatgaaatccaacgtct 25970962  T
Q  135 gtcgacataaacat----------------------agtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctc 212  Q
    ||||||||||| ||                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25970963 gtcgacataaaaatagtaccatgtcgacataaaaatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctc 25971062  T
Q  213 t 213  Q
    |    
T  25971063 t 25971063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 213
Target Start/End: Original strand, 25975303 - 25975503
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| |||||||        ||||||||||||||    
T  25975303 gtaccatattaaacaattttcatgacatcgatcctgttacggaaacataacatataaatataatgacataatttattgaataaaatgaaatccaacgtct 25975402  T
Q  135 gtcgacataaacat----------------------agtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctc 212  Q
    ||||||||||| ||                      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25975403 gtcgacataaaaatagtaccatgtcgacataaaaatagtaccaatatgcaatcataacaacactacaaaacaaagtgctacacattacggaaaacttctc 25975502  T
Q  213 t 213  Q
    |    
T  25975503 t 25975503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 36895495 - 36895678
Alignment:
Q  31 taatgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaac 130  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||       | |||||||||    
T  36895495 taatgtaccacattaaacaatttccatgacatcgactctgttacggtaacataacatataaatttaatggcatagtttattgaagaaaagaaaatccaac 36895594  T
Q  131 gtctgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  36895595 gtctgtcgacataaaaatagtaccgatatgcaataacaacaatactacaaaacaaagtgctaaacattacggaaaacttctctg 36895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 8121310 - 8121132
Alignment:
Q  36 taccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtctg 135  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||    
T  8121310 taccatattaaacaatttccatgacatcgaccctattacggtaacataacatataaatttaatgacatagtttattgaagaaaagaaaatccaacgtctg 8121211  T
Q  136 tcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    || ||||||| |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8121210 tcaacataaaaatagtactgatatgcaataacaacaatactacaaaacaaagtgctacacattacggaaaacttctctg 8121132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 26602254 - 26602435
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnng-gaaatccaacgt 132  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||       |  ||||||||| |    
T  26602254 tgtaccatgttaaacaattttcatgacatcgaccctattacggtaacataacatataaatttaatggcatagtttattgaagaaaagaaaaatccaacat 26602353  T
Q  133 ctgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    ||||||||||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  26602354 ctgtcgacataaaaatagtacttatatgcaattacaacaatactacaaaacaaagtgctacacattatagaaaacttctctg 26602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 37062654 - 37062483
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| ||||||  ||||  ||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||       | |||||||| ||||    
T  37062654 gtaccatattaaaatatttctatgacatcgaccctggtaccgtaacattacatataaatttaatagcatagtttattgaagaaaagaaaatccaaggtct 37062555  T
Q  135 gtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaa 206  Q
     |||||||| | ||||||| |||||||||| |||||||  |||||||||||||| ||| || ||||||||||    
T  37062554 atcgacatataaatagtacgaatatgcaataacaacaatgctacaaaacaaagtcctatacgttacggaaaa 37062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 214
Target Start/End: Complemental strand, 18256499 - 18256321
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||       ||||||||||||| |    
T  18256499 gtaccatattaaacaattttcatgacatcgaccctgttacggaaa-ataacatataaatttaatgacatagtttattgaataaaaggaaatccaacgttt 18256401  T
Q  135 gtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18256400 gtcgacataaaaatagtacgaatatgcaatcacaacaacactacaaaacaaagtgctacacattatggaaaacttctctg 18256321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 53520909 - 53521089
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||    
T  53520909 tgtaccatattaaacaatttccatggcatcgaccctattacggtaacataacatataaatttaatgacatagtttattgaagagaagaaaatccaacgtc 53521008  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    |||||||||||| |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  53521009 tgtcgacataaaaatagtactgatatgcaataacaacaatactacaaaacaaagtgctacacattaccaaaaacttctctg 53521089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 35 - 214
Target Start/End: Complemental strand, 36006452 - 36006273
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| ||||||||||||   ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||       | |||||||||||||    
T  36006452 gtaccatattaaacaatttctttgacatcgaccctattacagtaacataacatataaatttaatgacatagtttattgaagaaaagaaaatccaacgtct 36006353  T
Q  135 gtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    ||||||||||| ||||||   ||||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  36006352 gtcgacataaaaatagtattgatatgcaataacaacaatactacaaaataaagtgctatacattacggaaaacttctctg 36006273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 38095355 - 38095535
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||       | ||||||||||||    
T  38095355 tgtaccatattaaacaatttccttgacatcgaccctattacagtaacataacatataaatttaatggcatagtttattgaagaaaagaaaatccaacgtc 38095454  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    |||||||||||| |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38095455 tgtcgacataaaaatagtactgatatgcaataacaacaatactacaaaacaaagtgctacacattacggaaaacttctctg 38095535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 16678617 - 16678789
Alignment:
Q  42 attaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtctgtcgaca 141  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||       | ||||||| ||  ||||||||    
T  16678617 attaaacaacttacatgacatcgaccctgttactgtaacataacatataaatttaatggcatagtttattgaagaaaagaaaatccatcggttgtcgaca 16678716  T
Q  142 taaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    |||| ||||||   ||||||||| | | ||| |||||||||||||||||||||||||||| ||||||||||||    
T  16678717 taaaaatagtattgatatgcaataatagcaatactacaaaacaaagtgctacacattacgaaaaacttctctg 16678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 213
Target Start/End: Original strand, 38936163 - 38936336
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| ||||| ||||||||| |      |||||||||||||||||||||| ||||||||||||       | | ||||||| ||    
T  38936163 tgtaccatattaaacaatttccatgatatcgaccctat------aacataacatataaatttaatggcatagtttattgaagaaaagaatatccaacatc 38936256  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctct 213  Q
    |||||||||||| |||||||  ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  38936257 tgtcgacataaaaatagtactgatatgcaataacaacaatactacaaaacaaagtgatacacattacggaaaacttctct 38936336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 21057069 - 21056889
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||    
T  21057069 tgtaccatattaaacaatttccatgacatcgaccctgctacggtaacataacatataaatttaatgacatagtttattgaagaaaagaaaatccaacgtc 21056970  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    | |||||||||| |||||||  |||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21056969 tctcgacataaaaatagtactgatatgctataacaacaatactacaaaacaaagtgttacacattacggaaaacttctctg 21056889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 23086035 - 23086219
Alignment:
Q  31 taatgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaac 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        | |||||||||    
T  23086035 taatgtaccacattaaacaatttccatgacatcgaccctgttacggtaacataacatataaatttaatggcatagtttattaaagaaaagaaaatccaac 23086134  T
Q  131 gtctgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacaca-ttacggaaaacttctctg 214  Q
    ||||||||| ||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  23086135 gtctgtcgagataaaaatagtactgatatgcaataacaacaatactacaaaacaaagtgctacacatttacgaaaaacttctctg 23086219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 34 - 213
Target Start/End: Complemental strand, 8257021 - 8256842
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| ||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||       | |||||||| |||    
T  8257021 tgtaccatattaaacaatttccatgacatcaactctattacggtaacataacatataaatttaatggcatagtttattgaagaaaagaaaatccaatgtc 8256922  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctct 213  Q
    |||||||||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  8256921 tgtcgacataaaaatagtactcatatgcaataacaacaatactacaaaacaaagtgctacatattacggaaaacttctct 8256842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 37891373 - 37891493
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  37891373 gtaccatattaaacaattttcatgacatcgaccctgttacggaaacataacatataaatttaatgacatagtttattgaataaaaggaaatccaacgtct 37891472  T
Q  135 gtcgacataaacatagtacca 155  Q
    ||||||||||| | |||||||    
T  37891473 gtcgacataaaaaaagtacca 37891493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 37891507 - 37891539
Alignment:
Q  147 atagtaccaatatgcaatcacaacaacactaca 179  Q
    |||||||||||||||||||||||||||||||||    
T  37891507 atagtaccaatatgcaatcacaacaacactaca 37891539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 35103216 - 35103059
Alignment:
Q  34 tgtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtc 133  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||    
T  35103216 tgtaccatattaaacaatttccatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgaagaaaagaaaatccaacgtc 35103117  T
Q  134 tgtcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctaca 194  Q
    |||||||||||| ||| |    ||||||||| ||||||| |||||||||||||||||||||    
T  35103116 tgtcgacataaaaataat---gatatgcaataacaacaatactacaaaacaaagtgctaca 35103059  T

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Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 23455543 - 23455719
Alignment:
Q  36 taccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtctg 135  Q
    ||||| ||||||  |||| |||||||||||||||| ||  |||||||||||||  ||||||||| ||||||||||||       | |||||||| ||||     
T  23455543 taccatattaaaatatttgcatgacatcgaccctggtattgtaacataacata--aatttaatggcatagtttattgaagaaaagaaaatccaaggtcta 23455640  T
Q  136 tcgacataaacatagtaccaatatgcaatcacaacaacactacaaaacaaagtgctacacattacggaaaacttctctg 214  Q
    |||||||| | |||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  23455641 tcgacatataaatagtaccaatatgcaataacaataatactacaaaacaaagtcctacacattacggaaaaattctctg 23455719  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 19529255 - 19529193
Alignment:
Q  36 taccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaat 98  Q
    ||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  19529255 taccatattaaacaatttacatgacattaaccctgttacggtaacataacatataaatttaat 19529193  T

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Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 18272929 - 18273049
Alignment:
Q  35 gtaccacattaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattgnnnnnnnggaaatccaacgtct 134  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| |||||||        ||||||||||||||    
T  18272929 gtaccatattaaacaattttcatgacatcgaccctattacggaaacataacatataaatataatgacataatttattgaataaaatgaaatccaacgtct 18273028  T
Q  135 gtcgacataaacatagtacca 155  Q
    ||||||||||| |||||||||    
T  18273029 gtcgacataaaaatagtacca 18273049  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 37589758 - 37589688
Alignment:
Q  42 attaaacaattttcatgacatcgaccctgttacggtaacataacatataaatttaatgacatagtttattg 112  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  37589758 attaaacaatttacatgacatcgactctgttacggtaacataacatataaatttaatggcatagtttattg 37589688  T

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Target: scaffold0374 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 2075 - 2045
Alignment:
Q  184 aaagtgctacacattacggaaaacttctctg 214  Q
    |||||||||||||||||||||||||||||||    
T  2075 aaagtgctacacattacggaaaacttctctg 2045  T

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