View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9181_high_2 (Length: 602)

Name: NF9181_high_2
Description: NF9181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9181_high_2
NF9181_high_2
[»] chr7 (35 HSPs)
chr7 (13-591)||(4828653-4829231)
chr7 (73-403)||(30405518-30405849)
chr7 (134-423)||(24596843-24597135)
chr7 (129-305)||(17881457-17881635)
chr7 (165-399)||(29544533-29544771)
chr7 (82-260)||(37144851-37145029)
chr7 (118-397)||(7372434-7372710)
chr7 (83-234)||(9755732-9755883)
chr7 (83-234)||(9800529-9800679)
chr7 (83-260)||(7361638-7361816)
chr7 (165-331)||(3268898-3269066)
chr7 (165-399)||(23124914-23125152)
chr7 (165-307)||(1074466-1074611)
chr7 (82-194)||(8606001-8606112)
chr7 (165-331)||(1255145-1255314)
chr7 (169-435)||(18496583-18496852)
chr7 (166-255)||(22067817-22067906)
chr7 (83-331)||(4977752-4978004)
chr7 (214-403)||(8308895-8309083)
chr7 (167-331)||(20461580-20461746)
chr7 (88-146)||(21543071-21543129)
chr7 (169-255)||(21545810-21545896)
chr7 (168-331)||(7142115-7142281)
chr7 (259-402)||(3487228-3487370)
chr7 (176-291)||(5312758-5312875)
chr7 (165-398)||(20470674-20470911)
chr7 (346-399)||(20017151-20017204)
chr7 (359-398)||(7815534-7815573)
chr7 (346-397)||(21545692-21545743)
chr7 (346-399)||(22067666-22067719)
chr7 (359-399)||(315384-315424)
chr7 (217-306)||(12358719-12358810)
chr7 (165-260)||(315199-315294)
chr7 (217-331)||(9761347-9761464)
chr7 (166-254)||(46054713-46054801)
[»] chr8 (34 HSPs)
chr8 (83-482)||(30543695-30544095)
chr8 (82-401)||(11437350-11437673)
chr8 (165-401)||(29291785-29292023)
chr8 (138-379)||(13583403-13583637)
chr8 (118-255)||(24584735-24584872)
chr8 (165-254)||(14977118-14977208)
chr8 (174-391)||(14424684-14424904)
chr8 (165-399)||(16052140-16052378)
chr8 (169-403)||(22894391-22894627)
chr8 (165-403)||(32239301-32239543)
chr8 (193-435)||(5153800-5154045)
chr8 (165-399)||(12956503-12956733)
chr8 (221-331)||(28074583-28074695)
chr8 (166-308)||(35135376-35135522)
chr8 (169-321)||(10867006-10867160)
chr8 (82-302)||(31436410-31436632)
chr8 (165-403)||(27097661-27097902)
chr8 (174-308)||(28260245-28260381)
chr8 (165-402)||(28291961-28292200)
chr8 (168-300)||(6888156-6888287)
chr8 (165-395)||(28901217-28901441)
chr8 (174-301)||(12774805-12774935)
chr8 (83-260)||(30851105-30851282)
chr8 (365-423)||(12357696-12357754)
chr8 (365-423)||(12358824-12358882)
chr8 (346-399)||(16054492-16054545)
chr8 (166-249)||(5570158-5570241)
chr8 (346-397)||(13081800-13081851)
chr8 (356-403)||(31436678-31436724)
chr8 (346-399)||(11310120-11310172)
chr8 (165-253)||(24120245-24120334)
chr8 (165-254)||(28902103-28902192)
chr8 (346-399)||(28902287-28902340)
chr8 (358-402)||(30850960-30851004)
[»] chr3 (36 HSPs)
chr3 (82-381)||(28422384-28422685)
chr3 (155-436)||(18474175-18474458)
chr3 (133-379)||(11474828-11475078)
chr3 (165-331)||(26297763-26297929)
chr3 (133-286)||(26387822-26387977)
chr3 (83-331)||(21829065-21829315)
chr3 (167-402)||(19219071-19219310)
chr3 (346-436)||(19542950-19543040)
chr3 (165-331)||(8402484-8402651)
chr3 (174-331)||(25919403-25919556)
chr3 (174-318)||(33577757-33577903)
chr3 (174-280)||(19545967-19546075)
chr3 (181-279)||(30493249-30493349)
chr3 (166-330)||(33914500-33914662)
chr3 (165-253)||(1475293-1475381)
chr3 (228-307)||(26797205-26797285)
chr3 (165-260)||(11521154-11521248)
chr3 (168-254)||(13911282-13911368)
chr3 (182-403)||(23908130-23908354)
chr3 (346-399)||(25883301-25883354)
chr3 (174-249)||(27374468-27374543)
chr3 (346-403)||(5632402-5632459)
chr3 (185-309)||(5632496-5632614)
chr3 (209-254)||(25188815-25188860)
chr3 (168-260)||(23007071-23007163)
chr3 (259-331)||(26418830-26418902)
chr3 (352-399)||(18066001-18066048)
chr3 (362-397)||(19263769-19263804)
chr3 (346-399)||(1475143-1475196)
chr3 (83-128)||(5632628-5632673)
chr3 (346-399)||(10341985-10342038)
chr3 (135-321)||(19285084-19285271)
chr3 (166-254)||(2729630-2729718)
chr3 (356-400)||(8402413-8402457)
chr3 (359-399)||(11521376-11521416)
chr3 (219-327)||(27415236-27415347)
[»] chr1 (34 HSPs)
chr1 (83-403)||(52271104-52271426)
chr1 (98-421)||(26854161-26854485)
chr1 (174-403)||(19257665-19257895)
chr1 (168-402)||(15298731-15298967)
chr1 (133-403)||(25126462-25126735)
chr1 (174-403)||(26102080-26102312)
chr1 (174-399)||(11769857-11770086)
chr1 (165-399)||(23223425-23223665)
chr1 (165-394)||(25494357-25494580)
chr1 (165-399)||(30675498-30675735)
chr1 (122-436)||(21548619-21548936)
chr1 (165-399)||(26657490-26657727)
chr1 (175-381)||(25727790-25728000)
chr1 (175-381)||(25736198-25736408)
chr1 (133-318)||(18795163-18795350)
chr1 (169-255)||(19884190-19884276)
chr1 (181-330)||(27461114-27461266)
chr1 (339-402)||(23505947-23506010)
chr1 (174-323)||(25730511-25730663)
chr1 (165-254)||(50047195-50047284)
chr1 (217-373)||(31313618-31313777)
chr1 (165-260)||(8247663-8247758)
chr1 (165-247)||(12810336-12810418)
chr1 (169-255)||(18391100-18391186)
chr1 (346-399)||(12423778-12423831)
chr1 (177-271)||(15416966-15417062)
chr1 (359-399)||(30781971-30782011)
chr1 (356-403)||(25665629-25665676)
chr1 (176-254)||(12423926-12424004)
chr1 (214-256)||(23519768-23519810)
chr1 (346-399)||(9328365-9328418)
chr1 (346-399)||(23519632-23519685)
chr1 (135-215)||(21550930-21551010)
chr1 (359-399)||(50047386-50047426)
[»] chr5 (32 HSPs)
chr5 (137-397)||(19331497-19331759)
chr5 (82-260)||(23157794-23157975)
chr5 (83-317)||(20694572-20694808)
chr5 (168-402)||(7742730-7742967)
chr5 (168-435)||(19763713-19763988)
chr5 (165-331)||(26070488-26070656)
chr5 (165-325)||(24841767-24841930)
chr5 (217-399)||(26329933-26330116)
chr5 (227-399)||(11274193-11274369)
chr5 (168-260)||(18222510-18222602)
chr5 (133-270)||(20083448-20083586)
chr5 (228-391)||(25367671-25367836)
chr5 (174-399)||(17027550-17027778)
chr5 (165-399)||(25594556-25594793)
chr5 (166-398)||(16622541-16622767)
chr5 (165-324)||(24410869-24411030)
chr5 (171-260)||(25680616-25680705)
chr5 (168-260)||(16634063-16634155)
chr5 (165-249)||(17382052-17382136)
chr5 (217-403)||(18178166-18178357)
chr5 (83-206)||(22643924-22644047)
chr5 (165-260)||(24517368-24517463)
chr5 (312-402)||(18872912-18873002)
chr5 (177-251)||(24268581-24268655)
chr5 (177-251)||(24345210-24345284)
chr5 (166-260)||(15205658-15205752)
chr5 (86-152)||(25367555-25367621)
chr5 (346-421)||(22643746-22643821)
chr5 (165-254)||(12340026-12340115)
chr5 (192-260)||(11997900-11997968)
chr5 (365-397)||(18452677-18452709)
chr5 (362-398)||(30072330-30072366)
[»] chr2 (31 HSPs)
chr2 (83-331)||(19540969-19541219)
chr2 (83-234)||(29647577-29647728)
chr2 (165-326)||(21849011-21849174)
chr2 (83-260)||(27917989-27918165)
chr2 (169-435)||(18236130-18236399)
chr2 (95-331)||(24047326-24047564)
chr2 (228-398)||(17415028-17415201)
chr2 (94-286)||(22388735-22388924)
chr2 (139-250)||(17415211-17415322)
chr2 (165-260)||(21843008-21843103)
chr2 (118-307)||(22510914-22511104)
chr2 (226-403)||(27417122-27417303)
chr2 (174-403)||(34063700-34063937)
chr2 (177-402)||(18818723-18818956)
chr2 (259-403)||(14921898-14922043)
chr2 (165-249)||(21844646-21844730)
chr2 (169-308)||(17240812-17240950)
chr2 (169-324)||(21505078-21505236)
chr2 (165-260)||(35031716-35031811)
chr2 (165-250)||(17152167-17152252)
chr2 (178-403)||(24187993-24188224)
chr2 (217-270)||(30705268-30705321)
chr2 (259-401)||(1732661-1732804)
chr2 (178-318)||(39730474-39730616)
chr2 (168-398)||(30998788-30999021)
chr2 (346-399)||(16593614-16593667)
chr2 (346-403)||(22525679-22525736)
chr2 (133-253)||(32276526-32276646)
chr2 (165-255)||(28278434-28278524)
chr2 (346-399)||(25474235-25474288)
chr2 (226-254)||(15829205-15829233)
[»] chr4 (33 HSPs)
chr4 (226-402)||(17187250-17187427)
chr4 (118-402)||(19601765-19602052)
chr4 (228-403)||(31859760-31859938)
chr4 (83-403)||(29437401-29437716)
chr4 (174-403)||(23353646-23353873)
chr4 (177-331)||(10576479-10576635)
chr4 (133-422)||(21077215-21077507)
chr4 (165-331)||(9288224-9288392)
chr4 (133-302)||(21167711-21167883)
chr4 (165-399)||(34864159-34864392)
chr4 (217-399)||(15192269-15192454)
chr4 (83-282)||(22119578-22119779)
chr4 (165-260)||(1676301-1676396)
chr4 (165-260)||(1682829-1682924)
chr4 (165-318)||(17339760-17339914)
chr4 (165-325)||(25315169-25315332)
chr4 (169-399)||(27302796-27303028)
chr4 (190-401)||(13064465-13064679)
chr4 (165-255)||(9782994-9783084)
chr4 (217-399)||(17026560-17026745)
chr4 (168-307)||(26159773-26159914)
chr4 (169-308)||(46647214-46647354)
chr4 (228-403)||(33519107-33519285)
chr4 (273-399)||(47024629-47024755)
chr4 (178-399)||(1695710-1695935)
chr4 (194-260)||(10320225-10320291)
chr4 (217-260)||(1673826-1673869)
chr4 (165-237)||(12111360-12111433)
chr4 (178-255)||(18444277-18444354)
chr4 (358-399)||(18898192-18898233)
chr4 (346-399)||(51884800-51884853)
chr4 (346-394)||(5906631-5906679)
chr4 (192-286)||(20044219-20044315)
[»] scaffold0065 (2 HSPs)
scaffold0065 (82-205)||(12033-12156)
scaffold0065 (235-438)||(12328-12534)
[»] scaffold0190 (1 HSPs)
scaffold0190 (83-396)||(11564-11880)
[»] scaffold0337 (2 HSPs)
scaffold0337 (89-205)||(1604-1720)
scaffold0337 (348-438)||(2008-2098)
[»] chr6 (19 HSPs)
chr6 (89-205)||(24507645-24507761)
chr6 (174-399)||(17860312-17860540)
chr6 (228-403)||(26499706-26499884)
chr6 (217-302)||(9943111-9943198)
chr6 (165-286)||(26512755-26512878)
chr6 (165-286)||(26517871-26517994)
chr6 (348-438)||(24507267-24507357)
chr6 (346-399)||(15575122-15575175)
chr6 (229-373)||(9396496-9396642)
chr6 (174-307)||(16439482-16439616)
chr6 (165-309)||(14768223-14768369)
chr6 (288-398)||(30355456-30355567)
chr6 (165-324)||(32930412-32930573)
chr6 (165-250)||(13759467-13759552)
chr6 (217-331)||(12972317-12972433)
chr6 (346-399)||(15998708-15998761)
chr6 (169-254)||(20495806-20495890)
chr6 (349-445)||(14768093-14768189)
chr6 (228-301)||(22559176-22559250)
[»] scaffold0185 (2 HSPs)
scaffold0185 (165-322)||(1457-1616)
scaffold0185 (357-402)||(2709-2754)
[»] scaffold0171 (2 HSPs)
scaffold0171 (179-397)||(21425-21647)
scaffold0171 (168-237)||(6213-6282)
[»] scaffold0043 (1 HSPs)
scaffold0043 (94-437)||(58688-59038)
[»] scaffold0011 (1 HSPs)
scaffold0011 (155-402)||(228047-228295)
[»] scaffold0188 (1 HSPs)
scaffold0188 (214-398)||(26819-27007)
[»] scaffold1149 (2 HSPs)
scaffold1149 (358-401)||(1997-2040)
scaffold1149 (88-205)||(1723-1839)
[»] scaffold1026 (1 HSPs)
scaffold1026 (168-249)||(1850-1931)
[»] scaffold0386 (1 HSPs)
scaffold0386 (221-318)||(13016-13116)
[»] scaffold0836 (1 HSPs)
scaffold0836 (343-403)||(2803-2863)
[»] scaffold0282 (1 HSPs)
scaffold0282 (349-399)||(22477-22527)
[»] scaffold0362 (1 HSPs)
scaffold0362 (346-399)||(7817-7870)


Alignment Details
Target: chr7 (Bit Score: 547; Significance: 0; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 13 - 591
Target Start/End: Original strand, 4828653 - 4829231
Alignment:
Q  13 gacatcaccttaaatttagaataaaagtggagaattgttgaattttaactcaaagtttgatgttggtgcttgatgatggaataacatatgatatttttag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828653 gacatcaccttaaatttagaataaaagtggagaattgttgaattttaactcaaagtttgatgttggtgcttgatgatggaataacatatgatatttttag 4828752  T
Q  113 ctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828753 ctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcga 4828852  T
Q  213 ttcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4828853 ttcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatattacacga 4828952  T
Q  313 aggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaag 412  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828953 cggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaag 4829052  T
Q  413 atgaaagaatggccgaaaaagggtcgtaagctgctaaaatcgcacatgaggggagtgcctcatgagcccctgcggataaagccacacacccttcacatgg 512  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  4829053 atgaaagaacggccgaaaaagggtcgtaagctgctgaaatcgcacatgaggggagtgcctcatgagcctctgcggataaagccacccacccttcacatgg 4829152  T
Q  513 gataatattgcctacttccccacgtgcccctacgcaccaaaccatgtgcctcacgtatggacacggccttgatgtccat 591  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4829153 gataatattgtctacttccccatgtgcccctacgcaccaaaccatgtgcctcacgtatggacacggccttgatgtccat 4829231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 73 - 403
Target Start/End: Original strand, 30405518 - 30405849
Alignment:
Q  73 tgttggtgcttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagtt 172  Q
    ||||||| | |||||||||||||||||||||||||||| ||| | ||| |||||||||| |||||||||||||| |||||  ||||| ||| ||||||||    
T  30405518 tgttggtacatgatgatggaataacatatgatattttttgctatgtttctagtgtaattctttgcatttgaaggtaaattagaagtcaattagaggagtt 30405617  T
Q  173 ttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttt 270  Q
     | ||||||||||||||||||||||||| |||||| | || ||||||||||| || ||||||||||| ||||||||||||||| ||  |||||| |||||    
T  30405618 gttaatggtttgaggaactttttgtattgtttttatttgactcattgtaattcac-tttatcctaaaccatgcaactccataggtgttttgagt-ttttt 30405715  T
Q  271 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaat 369  Q
    | |||||||||||||| ||||  |||| |||| ||||   ||||||||||||||| |||||   || |||||||| ||||||||| |||||||| |||||    
T  30405716 agtgagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaat 30405815  T
Q  370 acaaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||| | ||||| ||| || ||||||||    
T  30405816 acaaagtgaatacaattcgtttgaaattccaagg 30405849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 134 - 423
Target Start/End: Complemental strand, 24597135 - 24596843
Alignment:
Q  134 ttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttat 233  Q
    |||||||||||||||||||  ||||| ||| || ||||| |||||||||||| | | |||||| ||| |||| |   || || |||||||| | ||||||    
T  24597135 ttgcatttgaaggaaaattagaagtcaattagaagagttgtcaatggtttgatggagtttttgcattgttttgatctgagtcgttgtaattcaattttat 24597036  T
Q  234 cctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    |||||||||||||||||| ||| ||  || |||||||||| ||||||||| |||| ||||  ||||||||| |||||  | | |||||||||||  ||||    
T  24597035 cctaaatcatgcaactccgtaggtgttttaagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtggaagatcgaggatataaaga 24596936  T
Q  332 cgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 423  Q
       || |||| | | || ||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||| |||  |||| |||||||||    
T  24596935 ttgaagttcagtggttcatagaagaaatttgaagacaatacaaagtgaagaaaattcatttgaagttccaaggcattgcaagacgaaagaatg 24596843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 129 - 305
Target Start/End: Complemental strand, 17881635 - 17881457
Alignment:
Q  129 attatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttact 228  Q
    |||||||||||||||||| |||||  |||||  ||  ||||||| |||||| ||| |||||||||||||||| |||| | |||| ||||||||||||| |    
T  17881635 attatttgcatttgaaggcaaattagaagtcatttaaaggagttgtcaatgattttaggaactttttgtattattttcattcgaatcattgtaatttaat 17881536  T
Q  229 tttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatat 305  Q
    |||||| ||||||||||||||  ||||   | ||||||||||||| |||||| ||||||| |||| |||||||||||||    
T  17881535 tttatcataaatcatgcaacttaataggtattttgagtctttttagtgagaagtcatgtaaatcggaaaaacaagatat 17881457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 29544533 - 29544771
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| ||||| ||||||||||| | ||||||| |||| | |||| || |||||||| |||||| ||||||||  ||||| ||||||  ||||  ||    
T  29544533 gaggagttgtcaatagtttgaggaacatattgtattgttttcactcgagtcgttgtaattcacttttctcctaaattgtgcaattccataagtgttttga 29544632  T
Q  263 gtctttttaa-tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 360  Q
    || ||||| | | || ||||||||| ||||| ||| ||||| |||||| |||||||| | |||| |||||   ||  |||||||| |||||||| | |||    
T  29544633 gtgttttttagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggttttt 29544732  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29544733 gaagacaatacaaagtgaagaaaattcatttcaagttcc 29544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 260
Target Start/End: Original strand, 37144851 - 37145029
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    ||||||||||||||||||||||| | |||| || | |||||||| ||||| |||| ||||||||| |||||  ||||| ||| |||||||| ||| || |    
T  37144851 ttgatgatggaataacatatgatgtatttaactatgtttttagtataattctttggatttgaaggcaaatttgaagtcaattagaggagttgtcattgtt 37144950  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||  ||||||||||||| |||| | || | || ||||||| || |||||||||||||||||||||||| ||| ||||    
T  37144951 ttgaaaaactttttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgtt 37145029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 118 - 397
Target Start/End: Complemental strand, 7372710 - 7372434
Alignment:
Q  118 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 217  Q
    |||||||||||||| |||||||||||||| |||||  ||    ||| |||||||| ||| |||||||| |||||||||||||| |||| | |||| || |    
T  7372710 tttttagtgtaattctttgcatttgaaggtaaattagaa----attagaggagttgtcattggtttgatgaactttttgtattgttttcattcgagtcgt 7372615  T
Q  218 tgtaatttacttttatc-ctaaatcatgcaactccatagttg--ttgagt-ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 313  Q
    ||||||| | ||||||| | ||||||||||||| ||||| ||  || |||  |||||| ||||||||| |||| |||   ||| ||||||||  || |||    
T  7372614 tgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttttagtgagaaatcttgtaaatcagcaaatcaagatat--catgaa 7372517  T
Q  314 ggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 397  Q
    ||||| ||||||  |||  | || ||||||||||||||||| | ||| |||||||||| ||||||||| |||| ||||||||||    
T  7372516 ggatcaaggatataaagctggaagttcaatgatcttagaagatttttaaagacaatac-aagtgaagaaaatttatttcaagtt 7372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 9755732 - 9755883
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||| ||||||||||||||||| ||||| | |||||||| || ||  ||||||||||||| |||||  ||||| ||| ||||| || ||| | |||    
T  9755732 tgatgatgaaataacatatgatatttgtagctatgtttttagtatattttcttgcatttgaaggcaaattataagtcaattagaggaattgtcactagtt 9755831  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 234  Q
    |||||||| ||||||||| |||| | |||| || ||||||||||||||||||    
T  9755832 tgaggaacgttttgtatttttttcactcgagtcgttgtaatttacttttatc 9755883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 9800529 - 9800679
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||||||||||||||||||||| |||| |  |||||||| || ||  |||||||||||||||||||  ||||| ||| ||||| || ||| | |||    
T  9800529 tgatgatggaataacatatgatatttgtagcatg-tttttagtatattttcttgcatttgaaggaaaattataagtcaattagaggaattgtcactagtt 9800627  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 234  Q
    |||||||| ||||||||| |||| | |||| || ||||||||||||||||||    
T  9800628 tgaggaacgttttgtatttttttcactcgagtcgttgtaatttacttttatc 9800679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 7361816 - 7361638
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||| ||  ||||||||| ||| || || | ||| |||||||||| ||||||||| |||| ||||| ||| |||||| |||||||| ||| |||||    
T  7361816 tgatgatgaaaatacatatgatctttctaactatgtttctagtgtaattctttgcattttaaggcaaattaaaaatctattagaggagttgtcattggtt 7361717  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc-ctaaatcatgcaactccatagttgtt 260  Q
     || |||||||||||| | |||| | |||| ||||||||| | ||||||||| ||||||||||||||||| ||| ||||    
T  7361716 cgatgaactttttgtaatgttttcattcgagtcattgtaactcacttttatcactaaatcatgcaactccgtagatgtt 7361638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 165 - 331
Target Start/End: Complemental strand, 3269066 - 3268898
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--a 262  Q
    |||||||| ||| ||||||||| ||| ||||||||| ||||   | || |  |||||||| |||||||||||||||||||||||| | ||  ||||   |    
T  3269066 gaggagttgtcattggtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaacttcgtatgtgttttaa 3268967  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||||| |||||||||||||| ||||  |||||||||||||||| |||||||| || ||| |||||    
T  3268966 gtctttttagtgagaaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaaga 3268898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 23124914 - 23125152
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| | | |||| |||||||| | ||||||| |||| | |||| || |||||||| || ||||||| ||||||| |||||| |||| ||||  ||    
T  23124914 gaggagttgttagtggtctgaggaacatattgtattgttttcactcgagtcgttgtaattcacatttatccaaaatcatacaactctataggtgttttga 23125013  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 360  Q
    || |||| || |||||||||||||| |||||  || ||||| ||||   ||||||||||||||| |||||   || |||||| | ||||| ||| |  ||    
T  23125014 gtgttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattctt 23125113  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
     |||||||||||||||||||| |||||||||||| ||||    
T  23125114 aaagacaatacaaagtgaagaaaattcatttcaaattcc 23125152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 165 - 307
Target Start/End: Original strand, 1074466 - 1074611
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| |||||||||||||||||   ||||||| |||| | ||||||||||||||||| |||||||||||||| || ||||||||||  ||  |||     
T  1074466 gaggagttgtcaatggtttgaggaaccaattgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgttttgt 1074565  T
Q  263 gtc-tttttaatgagaaatcatgtagatcgaaaaaacaagatatca 307  Q
    ||| |||||| |||||||||||||| || | |||| ||||| ||||    
T  1074566 gtcttttttagtgagaaatcatgtaaattggaaaagcaagacatca 1074611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 8606001 - 8606112
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    ||||||||||||||||||||||| |||| |||| | ||||||||    |||||||| ||| ||||||||||  || || ||| |||||||||||||||||    
T  8606001 ttgatgatggaataacatatgatgtttt-agctatgtttttagttattttatttgcgtttaaaggaaaattagaaatcaattagaggagttttcaatggt 8606099  T
Q  182 ttgaggaactttt 194  Q
    |||||||||||||    
T  8606100 ttgaggaactttt 8606112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 165 - 331
Target Start/End: Complemental strand, 1255314 - 1255145
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||||||||    ||||||| |||| | |||| ||||||||||| | |||||||||||||||||||||| ||||| ||  ||||    
T  1255314 gaggagttgtcaatggtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgcaacttcataggtgttttga 1255215  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    || |||| |||||| |||| || || ||| | ||| ||| | |||||| |||||||| |||||| |||||    
T  1255214 gtgttttgtaatgaaaaattatttaaatcaacaaatcaaaacatcacatgaaggatcaaggatacgaaga 1255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 435
Target Start/End: Original strand, 18496583 - 18496852
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 266  Q
    |||| ||||| |||||||||||| |||| ||| |||| | |||| ||||||||||| | |||||||||||||||||| ||| ||||| ||  ||||| ||    
T  18496583 agttgtcaattgtttgaggaactatttgaattgttttcattcgaatcattgtaattcatttttatcctaaatcatgcgacttcataggtgttttgagcct 18496682  T
Q  267 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaatgatcttagaagttatttgaaga 365  Q
     |||  ||||| |||||||| |||| ||||||  || |||    |||||||| |||||| |||||  ||| | | |  | ||||||||  |  |||||||    
T  18496683 atttggtgagatatcatgtaaatcggaaaaacgggacatcgagtgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaaga 18496782  T
Q  366 caatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 435  Q
     |||||||  |||||| ||||||||||||||||||||| |||  |||| | ||||| || ||||||||||    
T  18496783 aaatacaagatgaagaaaattcatttcaagttccaaggcatttcaagacgtaagaacggtcgaaaaaggg 18496852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 22067906 - 22067817
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    ||||||| ||||||||||||||||| |  |||||| |||| | |||| ||||||||||| | |||||||||| |||||||||||||||||    
T  22067906 aggagttgtcaatggtttgaggaacataatgtattgttttcactcgagtcattgtaattcaattttatcctagatcatgcaactccatag 22067817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 331
Target Start/End: Complemental strand, 4978004 - 4977752
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatt--tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatgg 180  Q
    |||||| |||||| || ||||||||||||||| | |||| ||| || || ||  ||||||| |||| |||||  ||||| |||  ||||||| ||| |||    
T  4978004 tgatgacggaataccacatgatatttttagctatgtttt-agtatattttttcttgcatttaaaggtaaattataagtcaattaaaggagttgtcattgg 4977906  T
Q  181 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgag---tctttttaatgaga 277  Q
    ||||| ||| |||||||||| || | | || | || |||||||| ||||||||||||||| |||||||| |||||  |||| |     ||| || |||||    
T  4977905 tttgaagaattttttgtatttttatcattcaagtcgttgtaattcacttttatcctaaattatgcaacttcatagaggttgtgagcggtttatagtgaga 4977806  T
Q  278 aatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||||| ||  | ||| ||||| |||||| ||||||||||||||| |||||    
T  4977805 aatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaaga 4977752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 214 - 403
Target Start/End: Complemental strand, 8309083 - 8308895
Alignment:
Q  214 tcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacg 311  Q
    ||||||| ||||| |||||||||||||||||||||||||||  ||  ||||||||||||| | |||||||||||| |||   ||||||||| |||||  |    
T  8309083 tcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttttagtaagaaatcatgtaaatcagcaaaacaagacatcacgtg 8308984  T
Q  312 aaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||| ||| ||| || |  |  ||||  ||||| | ||||||||| | ||||||||||||||||| | ||||  |||||| |||||||||||||    
T  8308983 aagaatcaaggttatg--gtggaaa--tcaatggttcttagaaggtctttgaagacaatacaaaataaagaagattcatatcaagttccaagg 8308895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 167 - 331
Target Start/End: Complemental strand, 20461746 - 20461580
Alignment:
Q  167 ggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagt 264  Q
    |||||| |||||||||||||||||  |||||||| |||| | |||| || |||||| | | ||| ||||||||||| |||||   |||| ||||  ||||    
T  20461746 ggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaacatgataggtgtttcgagt 20461647  T
Q  265 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||| |||||||||||||| ||||  |||| |||| ||||   |||||||| |||||| |||||    
T  20461646 ctttttagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaaga 20461580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 21543129 - 21543071
Alignment:
Q  88 atggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaagg 146  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||    
T  21543129 atggaataacatatgatgtttttagctatgtttttagtgtaattattttcatttgaagg 21543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 21545896 - 21545810
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    |||| ||||||||||||||||| | ||||||| |||| | |||| || |||||| | |||||||||||||||||||||||| |||||    
T  21545896 agttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacatag 21545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 331
Target Start/End: Original strand, 7142115 - 7142281
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--agtc 265  Q
    ||||| |||||||||| |||||| | || ||||  ||| | |||| || |||||||| |||||||||| | ||||||||||||||||| ||||   |||     
T  7142115 gagttgtcaatggtttaaggaacatattttattgctttcactcgagtcgttgtaattcacttttatccaagatcatgcaactccataggtgttttaagtg 7142214  T
Q  266 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||| | |||| |||||    
T  7142215 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaaga 7142281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 259 - 402
Target Start/End: Complemental strand, 3487370 - 3487228
Alignment:
Q  259 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaatga-tcttagaagtt 356  Q
    |||||||||||||||||||||||||||  ||||  ||||||||| |||| | |||||||| | ||||  |||| |||| | |||| || ||| |||||      
T  3487370 ttgagtctttttaatgagaaatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaaca-tcaacgactctcagaagac 3487272  T
Q  357 atttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  3487271 attttaagacaatacaaagtgaag--aattcatttgaagttccaag 3487228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 5312875 - 5312758
Alignment:
Q  176 aatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaat 273  Q
    |||||| | ||||||| |||||||| |||| | | || || |||||||| ||||||||| || | ||||||||||||||| ||  ||||||||||||| |    
T  5312875 aatggtctaaggaactatttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttttagt 5312776  T
Q  274 gagaaatcatgtagatcg 291  Q
    || |||||||||| ||||    
T  5312775 gataaatcatgtaaatcg 5312758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 398
Target Start/End: Complemental strand, 20470911 - 20470674
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| ||||||||||||||||| | || |||| |||| | |  | || |||||||| ||||| | ||||||||||||| || ||||| ||||  ||    
T  20470911 gaggagttgtcaatggtttgaggaacatattatattgttttcacttaagtcgttgtaattcactttcagcctaaatcatgcatctgcatagctgttttga 20470812  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 360  Q
    || |||| || ||| ||| |||||| ||||| ||| ||||| ||| || ||| |||| |||||  ||| |   || ||||||| | |||||||| |  ||    
T  20470811 gtgttttatagtgataaagcatgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttctt 20470712  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttc 398  Q
    |||||||||||||| |||||| |||| |||||||||||    
T  20470711 gaagacaatacaaaatgaagaaaattgatttcaagttc 20470674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 20017151 - 20017204
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  20017151 tcttagaaggttcttgaagacaatacaaagtgaagaaaattcatttcaagttcc 20017204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 7815534 - 7815573
Alignment:
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttc 398  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  7815534 ttgaagacaatacaaagtgaagaaaattcatttcaagttc 7815573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 21545743 - 21545692
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 397  Q
    ||||||||  ||||||||||||||| |||||||||| |||||||||||||||    
T  21545743 tcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagtt 21545692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 22067719 - 22067666
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||| | |||||||||||||||||    
T  22067719 tcttagaaggttgttgaagacaatacaaagtgaaaagaattcatttcaagttcc 22067666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 315384 - 315424
Alignment:
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  315384 ttgaagacaatacaaagtgaataaaattcatttcaagttcc 315424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 12358810 - 12358719
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatc 306  Q
    |||||||| | |||||||||||||||| ||||| ||||| ||  ||||||||||||| |||||||| || || |||| |||| ||| |||||    
T  12358810 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 12358719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 315199 - 315294
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| |||||||||||| |||  | ||||||| || | | |||| | ||||| ||| | |||||||||| ||||||||||||||||| ||||    
T  315199 gaggagttgtcaatggtttgaagaatatattgtattattgtcactcgagttattgttattcagttttatcctagatcatgcaactccataggtgtt 315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 9761464 - 9761347
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaa---tgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 313  Q
    |||||||| |||||||||||| || |||||| ||||||| ||||  |  |||||||   ||| |||||||||| ||||| ||| ||||| |||||  |||    
T  9761464 ttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatcgacaaatcaagacatcacgtgaa 9761365  T
Q  314 ggatcgaggataagaaga 331  Q
    ||||| |||||| |||||    
T  9761364 ggatcaaggatatgaaga 9761347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 46054713 - 46054801
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||||| ||| || ||||||||||  ||| |||| |||| | || | || |||||||||||||||||  |||||||||||||| ||||    
T  46054713 aggagttgtcattgatttgaggaacaatttatattgttttaattcaagtcgttgtaatttacttttataataaatcatgcaacttcata 46054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 9e-53; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 83 - 482
Target Start/End: Original strand, 30543695 - 30544095
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    ||||||||||| ||| |||||||||||||||| | |||||||| |  || |||||||||||||  ||||| |||||  ||| |||||||| |||||| ||    
T  30543695 tgatgatggaaaaacttatgatatttttagctatgtttttagtatttttttttgcatttgaagacaaattaaaagttaattagaggagttctcaatg-tt 30543793  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaat 280  Q
    ||| |||||||| ||||| |||| | | || |  |||||||| |||||||||||||||||||||| |  |||| ||||  ||||||||||  ||||||||    
T  30543794 tgatgaactttt-gtattgttttcatttgagttgttgtaattcacttttatcctaaatcatgcaattatataggtgttttgagtctttttggtgagaaat 30543892  T
Q  281 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat--cttagaagttatttgaagacaatacaaagtga 378  Q
    |||||| ||||  |||||||||||||||| ||||||| ||||||| |||||   || ||||||| |   ||| ||| ||||| ||||||||| |||||||    
T  30543893 catgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaagtga 30543992  T
Q  379 agataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcgtaagctgctaaaatcgcacatgaggggagtgcctcatgag 478  Q
    ||| ||||||||||||||||||||| |||  |||  | |||||||   |||||||||||| || ||||| ||||||  |||||||||  ||||||||| |    
T  30543993 agaaaattcatttcaagttccaaggcattgcaaggcggaagaatgagtgaaaaagggtcgaaaactgctgaaatcgtgcatgagggg-ttgcctcatgtg 30544091  T
Q  479 cccc 482  Q
    ||||    
T  30544092 cccc 30544095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 82 - 401
Target Start/End: Original strand, 11437350 - 11437673
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    |||||| ||||||||||| |||| |||||| || |  |||||||    || |||| |||| |||| |||||| ||||| ||| |||||||||||||||||    
T  11437350 ttgatgttggaataacatttgatgtttttacctatgcttttagttattttctttgtatttaaaggcaaattggaagtcaattagaggagttttcaatggt 11437449  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtctttttaatgagaaa 279  Q
    | || ||| ||||||| || |||| | |||| || || ||||| | ||| ||| ||  ||||||||||||||| || | ||||||||||||| |||||||    
T  11437450 tcgaagaaatttttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtctttttagtgagaaa 11437549  T
Q  280 tcatgtagatcgaaaaaacaagatatcacacg-aaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtg 377  Q
    ||||||| ||||  ||||||||| ||||   | ||||||| |||||| ||| |   || |||||| | |||||||||  |||||||||||||||| ||||    
T  11437550 tcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagagtg 11437649  T
Q  378 aagataattcatttcaagttccaa 401  Q
    |||||||||||||| |||||||||    
T  11437650 aagataattcatttgaagttccaa 11437673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 165 - 401
Target Start/End: Original strand, 29291785 - 29292023
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttga 262  Q
    |||||||| |||||||||||||||| ||||| |||| |||| | | || || |||||||  | ||||||||||||||||||||||  ||| || | ||||    
T  29291785 gaggagttatcaatggtttgaggaattttttatatt-ttttcatttgagtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttga 29291883  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttg 361  Q
    ||||||||| | |||||||||||| ||||  |||||||||||||||  |||| |||||||||| ||| |   ||  ||||| | ||||||||| | ||||    
T  29291884 gtctttttagtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttg 29291983  T
Q  362 aagacaatacaaagtgaagataattcatttcaagttccaa 401  Q
    ||||||| | |||||||| | |||||||||||| ||||||    
T  29291984 aagacaacagaaagtgaaaaaaattcatttcaaattccaa 29292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 138 - 379
Target Start/End: Complemental strand, 13583637 - 13583403
Alignment:
Q  138 atttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatccta 237  Q
    |||| |||| |||||  ||||| ||| |||||||| | ||| || |||||||| |||| |||| |||||| |||| || |||||||| | ||||||||||    
T  13583637 attttaaggtaaattagaagtcaattagaggagttgttaatagtctgaggaaccttttctattgtttttattcgagtctttgtaattcagttttatccta 13583538  T
Q  238 aatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaa 335  Q
    ||||||          |||||  ||||||||||||| |||||||||||||| ||||| ||||||||| ||||   ||||||||||||||| || ||   |    
T  13583537 aatcat----------agttggtttgagtctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattga 13583448  T
Q  336 aattcaat-gatcttagaagttatttgaagacaatacaaagtgaa 379  Q
    | |||||| | ||||||||| ||||||||||||||||||||||||    
T  13583447 agttcaatggttcttagaagatatttgaagacaatacaaagtgaa 13583403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 24584872 - 24584735
Alignment:
Q  118 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 217  Q
    |||||||| ||||| |||| ||||||||| |||||  ||||| ||| |||||||| |||  ||||||||||| |||||||||| |||| | |||| ||||    
T  24584872 tttttagtataattctttgtatttgaaggcaaattagaagtcaattagaggagttgtcatcggtttgaggaattttttgtattgttttcattcgagtcat 24584773  T
Q  218 tgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    ||||||| | ||||||| ||||||||||||||| ||||    
T  24584772 tgtaattcatttttatcataaatcatgcaactctatag 24584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 14977208 - 14977118
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaa-tcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||||||| ||||||||||||||||| | ||||||| ||||| | |||| ||||||||||| |||||||||||||||||||||||||||||    
T  14977208 gaggagttgtcaatggtttgaggaacatattgtattgtttttcactcgagtcattgtaattcacttttatcctaaatcatgcaactccata 14977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 174 - 391
Target Start/End: Complemental strand, 14424904 - 14424684
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttga--gtcttttta 271  Q
    |||||||||||||||||||||| |||  |||| | |||| || |||||||| | |||||||||||||||||||||||||||| ||||    || ||||||    
T  14424904 tcaatggtttgaggaactttttatatggttttcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgttttaggttttttta 14424805  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 370  Q
     |||||||||||||| ||||  ||||||||| | ||   |||||||  | ||||||||||   ||  ||||| | ||||||||| | |||||| |||||     
T  14424804 gtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaatt 14424705  T
Q  371 caaagtgaagataattcattt 391  Q
    ||| ||||||| |||||||||    
T  14424704 caatgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 399
Target Start/End: Complemental strand, 16052378 - 16052140
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| ||||||||||||  ||| | || || | |||| | |||| || || ||||| || |||| | ||||||||||||||| |||| ||||  ||    
T  16052378 gaggagttgtcaatggtttgaataacatattttaatgttttcactcgagtcgttataattcacatttaccttaaatcatgcaactcaataggtgttttga 16052279  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 360  Q
    || |||| || ||||||||||| || ||| | ||| ||||| |||||| |||||||  |||||| |||||  |||   ||||||| |||||||| | |||    
T  16052278 gtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaaggttttt 16052179  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  16052178 gaagacaatacaaaatgaagaaaattcatttcaagttcc 16052140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 403
Target Start/End: Complemental strand, 22894627 - 22894391
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtct 266  Q
    |||| |||||||||||||| || | |||||||||||  | |||| ||||||| ||| ||||||||| || ||||| |||||||||||   | || ||| |    
T  22894627 agttgtcaatggtttgaggtacatattgtattctttacactcgaatcattgtgattcacttttatcttagatcattcaactccataggtatttttagtgt 22894528  T
Q  267 t-tttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaa-tgatcttagaagttatttgaag 364  Q
    | | || |||||||||||||| |||| |||| |||||||||||| |||||||| | ||||  ||||    ||||||| || ||||||| | | |||||||    
T  22894527 tctatagtgagaaatcatgtaaatcg-aaaatcaagatatcacatgaaggatcaatgatataaaga-ttgaattcaattgttcttagatggtttttgaag 22894430  T
Q  365 acaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||||||||||||||| ||||| ||| |||||||||||    
T  22894429 acaatacaaagtgaagaaaattcttttgaagttccaagg 22894391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 403
Target Start/End: Original strand, 32239301 - 32239543
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||||| ||| | ||||||| |||||| | || || ||| |||| ||||||||| |||||||||||||||||||  ||  ||||    
T  32239301 gaggagttgtcaatggtttgagtaacatattgtattgtttttacttgagtcgttgcaattcacttttatcttaaatcatgcaactccataaatgttttga 32239400  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 360  Q
    || |||| || ||||||||| |||| || || ||| | ||| |||||| |||||||  |||||| |||||   || |||||| | | ||| ||| |  ||    
T  32239401 gtgttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttctt 32239500  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
     ||||||||| |||||||||| ||||||||||||||| |||||    
T  32239501 aaagacaataaaaagtgaagaaaattcatttcaagtttcaagg 32239543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 193 - 435
Target Start/End: Original strand, 5153800 - 5154045
Alignment:
Q  193 tttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatc 290  Q
    |||||||| |||| | |||| ||||||||||| | ||||||| |||||||| |||||| |||| ||  ||||||||||||| | |||||||||||| ||     
T  5153800 tttgtattattttcattcgagtcattgtaattcagttttatcttaaatcattcaactcgataggtgttttgagtctttttagtaagaaatcatgtaaata 5153899  T
Q  291 gaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaaagtgaagataattcat 389  Q
    |  ||||||||| || |   ||||||||||||||| |||||   ||  ||||||| | || |||| | ||||||||||||| ||  |||| | |||||||    
T  5153900 ggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaatataacatgaataaaattcat 5153999  T
Q  390 ttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 435  Q
    |||||||||||||  |||  |||| | |||||||  ||||||||||    
T  5154000 ttcaagttccaagacattgcaagacggaagaatgctcgaaaaaggg 5154045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 12956503 - 12956733
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 264  Q
    |||||||| ||||||||||||||||  | ||||||| |||| | |||| |||| |||||| ||||||||||||||||||| ||||| |||| |||         
T  12956503 gaggagttgtcaatggtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcacttttatcctaaatcatgtaactctataggtgt----- 12956597  T
Q  265 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgatcttagaagttatttgaa 363  Q
     ||| || |||  |||||| || ||||| ||| |||||||||||| |||| ||| |||||| |||||| ||| ||  | || | || |||| | ||| ||    
T  12956598 -tttgtagtgaagaatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaa 12956696  T
Q  364 gacaatacaaagtgaaga-taattcatttcaagttcc 399  Q
    || |||||||||||||||  |||||||||||||||||    
T  12956697 gataatacaaagtgaagagaaattcatttcaagttcc 12956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 28074583 - 28074695
Alignment:
Q  221 aatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 318  Q
    |||| |||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||| ||    ||||||||| |||| | ||||||||    
T  28074583 aattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttttagtgagaaatcatgtaaatatgcaaaacaagacatcaaatgaaggatc 28074682  T
Q  319 gaggataagaaga 331  Q
     |||||| |||||    
T  28074683 aaggatatgaaga 28074695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 35135522 - 35135376
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgag 263  Q
    ||||||| |||| ||||| ||| || ||||||||| |||||| |||| ||||||||||| | ||||||||||||||||||||||||| |  ||  |||||    
T  35135522 aggagttgtcaaaggttttaggtacattttgtattgtttttactcgagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgag 35135423  T
Q  264 tctttttaat--gagaaatcatgtagatcgaaaaaacaagatatcac 308  Q
    |||||||  |  ||||||||| ||| ||||| ||||||||| |||||    
T  35135422 tctttttttttggagaaatcaggtaaatcgacaaaacaagacatcac 35135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 169 - 321
Target Start/End: Original strand, 10867006 - 10867160
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 266  Q
    |||| ||||||||||||||||  ||||||||| |||| | | || || |||||||| | |||||||  |||||||||||||||| || ||  |||| |||    
T  10867006 agttgtcaatggtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactccaaaggtgctttgaatct 10867105  T
Q  267 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgag 321  Q
    ||||| ||||||||||||||  |||  ||||||||||| |||  |||||||||||    
T  10867106 ttttagtgagaaatcatgtaagtcggcaaaacaagataccacgtgaaggatcgag 10867160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 302
Target Start/End: Original strand, 31436410 - 31436632
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    ||||||||||| || |||||||||||||   || ||||||||||    |||| |||||||||||| ||||   | ||   || |||||||| |||||| |    
T  31436410 ttgatgatggagtatcatatgatattttatactatatttttagttattttatctgcatttgaaggcaaataagatgtaatttagaggagttgtcaatgat 31436509  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 279  Q
    ||||||||     | |||| |||| | |||| ||| ||||||||| |||||||||||||||||||||| ||||| ||  |||| |||||||| |||||||    
T  31436510 ttgaggaataaactatatttttttcattcgagtcagtgtaatttagttttatcctaaatcatgcaactacataggtgttttgaatctttttagtgagaaa 31436609  T
Q  280 tcatgtagatcgaaaaaacaaga 302  Q
    ||||||| ||| | |||||||||    
T  31436610 tcatgtaaatcaacaaaacaaga 31436632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 165 - 403
Target Start/End: Complemental strand, 27097902 - 27097661
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    ||||| || ||||||||||||||||| | ||| ||| |||| | | || || |||||||| | ||||||| |||||||||||||| ||||| ||||   |    
T  27097902 gaggaattgtcaatggtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgtttaaa 27097803  T
Q  263 gtc--tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatt 359  Q
    |||  |||||| |||||||||||||| ||||  ||||||||| |||||  || |||| ||  ||| |||||   ||  | ||| | ||||||||| | ||    
T  27097802 gtctttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattgaa--tgaatagttcttagaaggtctt 27097705  T
Q  360 tgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||    
T  27097704 tgaagacaatacaagttgaagaaaattcaattcaagttccaagg 27097661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 308
Target Start/End: Complemental strand, 28260381 - 28260245
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtcttttta 271  Q
    ||||||||| | ||||| ||||||||| |||| | |  | || ||||||||||  ||||||||||||||||  ||||||||| ||||  |||||||||||    
T  28260381 tcaatggttggtggaacattttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccataggtgttttgagtcttttta 28260282  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcac 308  Q
     |||||||||||||| |||   ||||||||| |||||    
T  28260281 gtgagaaatcatgtaaatcagcaaaacaagacatcac 28260245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 402
Target Start/End: Complemental strand, 28292200 - 28291961
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| ||| ||||||||||||| |||| | ||||||| | | || |  || ||||| | ||||||||||| | |||||||| || |  ||||  |     
T  28292200 gaggagttgtcagtggtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgttttgt 28292101  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgatcttagaagttatttg 361  Q
    || |||||| |||||| ||||||| ||||  |||| |||| |||||| ||||||| ||||||| |||||  ||| ||| |  | ||||||||| | ||||    
T  28292100 gtttttttagtgagaa-tcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttg 28292002  T
Q  362 aagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    ||||||||||||| |||||| |||  |||||||||||||||    
T  28292001 aagacaatacaaaatgaagaaaataaatttcaagttccaag 28291961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 6888287 - 6888156
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctt 267  Q
    ||||| ||||||||| ||| ||| ||||||||| |||| | | || ||||||||||| | || ||||||||||||||||||||||    | ||||||| |    
T  6888287 gagttgtcaatggttagagaaacattttgtatt-ttttcatttgagtcattgtaattcagttctatcctaaatcatgcaactccaggtgttttgagtcat 6888189  T
Q  268 tttaatgagaaatcatgtagatcgaaaaaacaa 300  Q
    |||| |||||||||||||| ||| | |||||||    
T  6888188 tttagtgagaaatcatgtaaatcaacaaaacaa 6888156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 395
Target Start/End: Complemental strand, 28901441 - 28901217
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 264  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | |||| || ||||||||   |||||||||| || |||||||||| ||| |||         
T  28901441 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgtttttatcctagataatgcaactccttagatgt----- 28901347  T
Q  265 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaa 363  Q
     ||| || ||| |||| ||||| ||||| ||| ||||| |||| | |||| ||| | |||| |||||    |||||||| | ||||| ||| | | ||||    
T  28901346 -tttgtagtgataaataatgtacatcgacaaatcaagacatcatatgaagaatcaatgatatgaaga-ttgaattcaatggttcttataaggtttctgaa 28901249  T
Q  364 gacaatacaaagtgaagataattcatttcaag 395  Q
    |||||||||||||||||| |||||||||||||    
T  28901248 gacaatacaaagtgaagaaaattcatttcaag 28901217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 12774935 - 12774805
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagt-cttttt 270  Q
    |||||||||||| | || |||| |||| |||||| | || ||||||||||||| ||||||||||||||||||||  |||||| ||  || ||| ||||||    
T  12774935 tcaatggtttgacgtacattttatattatttttatttgagtcattgtaatttagttttatcctaaatcatgcaataccataggtgtttttagtacttttt 12774836  T
Q  271 aatgagaaatcatgtagatcgaaaaaacaag 301  Q
    | | |||||| ||||| |||| |||||||||    
T  12774835 agtaagaaataatgtaaatcggaaaaacaag 12774805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 30851282 - 30851105
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||||||   |||||||||||||| ||| | ||||||||    || |||  |||||||||||||||  |||||  ||  | ||||| |  ||||||    
T  30851282 tgatgatggaacgtcatatgatatttttggctatgtttttagttattttctttatatttgaaggaaaattagaagtcatttataagagttgttgatggtt 30851183  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||||| ||||| |||| |||| | |||| || |||||||| |  |||||||||||||||||||||| |||| ||||    
T  30851182 tgaggaagtttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgtt 30851105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 12357696 - 12357754
Alignment:
Q  365 acaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 423  Q
    |||||| |||||||||| |||||||||||| |||||||| |||| |||| |||||||||    
T  12357696 acaataaaaagtgaagaaaattcatttcaaattccaaggcattataagaggaaagaatg 12357754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 12358824 - 12358882
Alignment:
Q  365 acaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 423  Q
    |||||| |||||||||| |||||||||||| |||||||| |||| |||| |||||||||    
T  12358824 acaataaaaagtgaagaaaattcatttcaaattccaaggcattataagaggaaagaatg 12358882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 16054492 - 16054545
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||| ||||||||||||||| |||||||||||||||||    
T  16054492 tcttagaaggttgttgaagaaaatacaaagtgaagaaaattcatttcaagttcc 16054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 5570241 - 5570158
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 249  Q
    ||||||| |||||  |||||||||| | ||||||| |||| | |||| |  |||||||| |||||||||||| |||||||||||    
T  5570241 aggagttgtcaatactttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaact 5570158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 13081851 - 13081800
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 397  Q
    ||||||||| |  |||||||||||||||| |||||| |||||||||||||||    
T  13081851 tcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtt 13081800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 31436678 - 31436724
Alignment:
Q  356 tatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||    
T  31436678 tatttgaagacaatacaaagtgaaaaaaatt-atttcaagttccaagg 31436724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 11310172 - 11310120
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| | |||||| ||||||||||||||||| |||| ||||||||||||    
T  11310172 tcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-atttcaagttcc 11310120  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 24120245 - 24120334
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcga-ttcattgtaatttacttttatcctaaatcatgcaactccat 253  Q
    |||||||| |||| |||||||||||  | ||||||| ||||| | | | ||| ||||| || ||||||||||||||| ||||||||||||    
T  24120245 gaggagttgtcaacggtttgaggaatatattgtattttttttcacccaattcgttgtagttaacttttatcctaaataatgcaactccat 24120334  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 28902103 - 28902192
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||||||| | ||||||||||| ||| | ||||||| |||| | |||| || |||||||| |||||||||||| | || |||| ||||||    
T  28902103 gaggagttattaatggtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatcctataccacgcaaatccata 28902192  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 28902287 - 28902340
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||| | ||||||||| |||||||    
T  28902287 tcttagaaggttattgaagacaatacaaagtgaataaaattcattttaagttcc 28902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 30851004 - 30850960
Alignment:
Q  358 tttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||    
T  30851004 tttgaatataatacaaagtgaagaaaattaatttcaagttccaag 30850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 82 - 381
Target Start/End: Original strand, 28422384 - 28422685
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    |||||||| ||||||||||| || |||||  || |  ||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||| ||  | ||    
T  28422384 ttgatgatagaataacatattatgttttttactatgcttttagtgtaattctttgcatttgaaggaaaattagaagtcaattagaggagttgtcgtttgt 28422483  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaa 278  Q
    |||||||| |||||||||| |||| | |||| ||||||||||| |||||||| |||||||||||||||| || | ||  |||| | |||| || ||||||    
T  28422484 ttgaggaattttttgtattgttttcattcgaatcattgtaattcacttttat-ctaaatcatgcaactcaattggtgttttgaatgttttgtagtgagaa 28422582  T
Q  279 atcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtga 378  Q
    |||||||||||||| ||| ||| | |||||  ||||||| ||||||| |||||   || ||||||||| ||||||| |||||||||||||||||||||||    
T  28422583 atcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaatgatgttagaaggtatttgaagacaatacaaagtga 28422682  T
Q  379 aga 381  Q
    |||    
T  28422683 aga 28422685  T

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Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 155 - 436
Target Start/End: Original strand, 18474175 - 18474458
Alignment:
Q  155 aagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||| ||| ||||| || ||||| ||||||||||||  ||||||| |||  | |||||||||||||||| ||| |||||||||||||||||||||||||    
T  18474175 aagtcaattagaggatttatcaatcgtttgaggaactgattgtattgtttc-attcgattcattgtaattcactgttatcctaaatcatgcaactccata 18474273  T
Q  255 gttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttag 351  Q
    | ||  ||||||||||| | |||||||||||||| ||||  || |||||| || ||| |||||||||| |||   ||||   || ||||||| | |||||    
T  18474274 ggtgttttgagtcttttcagtgagaaatcatgtaaatcgggaacacaagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttag 18474373  T
Q  352 aagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggt 436  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||  |||| ||||||| |  |||||||||||    
T  18474374 aaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaatgcattgcaagacgaaagaacgagcgaaaaagggt 18474458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 133 - 379
Target Start/End: Original strand, 11474828 - 11475078
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||| || ||||||||||| |||||  ||  |||| |  ||||||||||||||||||||||||||| |||| | |||| || |||||||| | |||||    
T  11474828 tttgcacttaaaggaaaattggaagtcgtttaaaggactagtcaatggtttgaggaactttttgtattattttcattcgactcgttgtaattcaatttta 11474927  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtc-tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaa 329  Q
    ||||||||||||||||| ||||  ||  ||||||| |||||| |||||||||||||| ||||  ||||||||| |||||| |||||||||| |||| ||     
T  11474928 tcctaaatcatgcaacttcatatgtgttttgagtcttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgag 11475027  T
Q  330 gacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaa 379  Q
    ||   ||  | ||| | ||||||||| ||||||||||||||||||||||||    
T  11475028 gattcaagataaatggttcttagaagatatttgaagacaatacaaagtgaa 11475078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 26297763 - 26297929
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 264  Q
    |||||||| | ||||||||||| |||||||| |||| |||| | |||| || |||||||| | |||||||||||||||||||||| ||||  ||||||||    
T  26297763 gaggagttgttaatggtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttgagt 26297862  T
Q  265 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    || |||| ||| |||||||||| ||||  ||||||||| ||||   ||||||||||||||| |||||    
T  26297863 ctatttagtgataaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaaga 26297929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 26387977 - 26387822
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||| |||||  ||||  ||| ||| |||| ||||||||||||| ||| |||||||||||||| | | |  || | |||||| | |||||    
T  26387977 tttgcatttgaaggcaaattagaagtaaattagagtagttgtcaatggtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagtttta 26387878  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgta 286  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  26387877 tcctaaatcatgcaactccatagatgttttgagtctttttaatgagaaatcatgta 26387822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 331
Target Start/End: Complemental strand, 21829315 - 21829065
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    ||||||||| ||| ||||||||||||||  || |||||||| |    ||||||||||||||||||||||   | |||  || |||||||| |||||||||    
T  21829315 tgatgatgggatatcatatgatatttttgactatatttttatttattttatttgcatttgaaggaaaataagaggtcatttagaggagttgtcaatggtt 21829216  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat---agttgttgagtctttttaatgagaaa 279  Q
    |||||||| ||||||||| |||| | | || || |||||||| | |||||||||||||||| ||||| |||   |||| ||| ||||| ||| |||||||    
T  21829215 tgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaacttcatatgagtt-ttgggtcttgttagtgagaaa 21829117  T
Q  280 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    || |||| ||||   |||||||| |||||| |||| ||| |||||| |||||    
T  21829116 tcttgtaaatcgtcgaaacaagacatcacatgaagtatcaaggatatgaaga 21829065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 167 - 402
Target Start/End: Complemental strand, 19219310 - 19219071
Alignment:
Q  167 ggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagt 264  Q
    |||||| ||||||||||||||| | | || ||||  ||| | | || || |||||||| |||||||||| |||||||||||| |||||  ||||  ||||    
T  19219310 ggagttgtcaatggtttgaggagcatattttattactttcactagagtcgttgtaattcacttttatccaaaatcatgcaacaccataaatgttttgagt 19219211  T
Q  265 ctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttga 362  Q
     |||| || |||| ||||||||| |||   ||| ||||| |||||| |||||||| |||||| |||||   ||  |||||| | |||||||| | |||||    
T  19219210 gttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttga 19219111  T
Q  363 agacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    ||||||||||||||||| | |||||||||||| |||||||    
T  19219110 agacaatacaaagtgaataaaattcatttcaaattccaag 19219071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 346 - 436
Target Start/End: Complemental strand, 19543040 - 19542950
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggt 436  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||| ||||||  |  |||||||||||    
T  19543040 tcttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaaggcattgcaagacgaaagatagagcgaaaaagggt 19542950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 331
Target Start/End: Complemental strand, 8402651 - 8402484
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| |||||||||||||||||  |||||||| |||| | |||| || |||||||| | ||||||| |||||||||||||||||||| ||  ||||    
T  8402651 gaggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactccataggtgttttga 8402552  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||| |||||  ||| |||| |||| ||||| | | ||||| ||||   ||||||||||||||| |||||    
T  8402551 gtc-ttttagcgaggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaaga 8402484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 331
Target Start/End: Complemental strand, 25919556 - 25919403
Alignment:
Q  174 tcaatggtttgaggaactttt--tgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttta 271  Q
    ||||||||||||||||| | |  ||| || |||||| | || |||| |||||| |||||||||||||||||||||||||||||| |||      ||| ||    
T  25919556 tcaatggtttgaggaacatatattgtgttgtttttacttgagtcatcgtaattcacttttatcctaaatcatgcaactccatagatgt------tttgta 25919463  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
     |||| ||||||||| ||||| ||| |||||||||||| |||||||| |||||| |||||    
T  25919462 gtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaaga 25919403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 318
Target Start/End: Original strand, 33577757 - 33577903
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    |||||||||||| |||| ||||||||| |||||| | |||||||||||||| | || ||||||||||||||||||  ||| | ||  |||||||||||||    
T  33577757 tcaatggtttgaagaacgttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaacctcattggtggtttgagtcttttta 33577856  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 318  Q
    | || ||| |||||| ||||  |||  |||| |||||| ||||||||    
T  33577857 aagaaaaaacatgtaaatcggcaaagtaagacatcacatgaaggatc 33577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 19546075 - 19545967
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    ||||||||||||||||||| ||||||| |||||| | || ||||||||||| ||| |||||||| |||||| || |  |||||||  |||||| ||||||    
T  19546075 tcaatggtttgaggaacttattgtattgtttttatttgagtcattgtaattcactattatcctatatcatgtaattttatagttgttttgagttttttta 19545976  T
Q  272 atgagaaat 280  Q
    |||||||||    
T  19545975 atgagaaat 19545967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 30493349 - 30493249
Alignment:
Q  181 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaa 278  Q
    |||||| ||||||||||||| |||| | |||| || ||||| |||| |||||||||||||||||||| ||||| | ||  ||||||||||||| ||||||    
T  30493349 tttgagaaactttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttttagtgagaa 30493250  T
Q  279 a 279  Q
    |    
T  30493249 a 30493249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 33914662 - 33914500
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtc 265  Q
    ||||||| |||| |||||||||||| | ||||||| |||||| |||| || |||||||| ||  |||||| |||||||||||||| || ||| ||||||     
T  33914662 aggagttgtcaacggtttgaggaacatattgtattgtttttactcgagtcgttgtaattcac-gttatcccaaatcatgcaactctat-gtt-ttgagtg 33914566  T
Q  266 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 330  Q
    |||| || |||||||||||||| |||||  || ||||| |||||  |||||||| |||||| ||||    
T  33914565 ttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaag 33914500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 1475381 - 1475293
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat 253  Q
    |||||||||||||||||||||||||  | ||||||| |||| | |||| || |||||||| | || ||||||| |||||||||||||||    
T  1475381 gaggagttttcaatggtttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaactccat 1475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 26797285 - 26797205
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt-gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatca 307  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||  |||| |||||||| ||||| ||||||||| ||||    
T  26797285 ttttatcctaaatcatgcaacttcataggtgtttgagtctttttagagagatatcatgtaaatcgacaaaacaagacatca 26797205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 11521154 - 11521248
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| ||||||||||||||||| | ||||||| |||||| | ||||   ||||||| | |||||||||| ||||||||| ||||||||||||    
T  11521154 gaggagttgtcaatggtttgaggaacatattgtattatttttacttgatt-tgtgtaattcagttttatcctagatcatgcaagtccatagttgtt 11521248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 13911282 - 13911368
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||| ||||||||||||||||| | | ||||| |||| | | || ||||||||||| |||||||||||| ||||||||||| ||||    
T  13911282 gagttgtcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaacttcata 13911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 403
Target Start/End: Complemental strand, 23908354 - 23908130
Alignment:
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 279  Q
    ||||||||| ||||||||| |||| | ||||||| ||||||||  ||||||||| |||| |||||| | ||||| ||  |||||||||| ||  ||||||    
T  23908354 ttgaggaacattttgtattgttttcattcgattcgttgtaattcccttttatccaaaataatgcaatttcataggtgctttgagtctttctagggagaaa 23908255  T
Q  280 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtga 378  Q
    ||||||| | ||  ||| ||||| ||| || |||||||| || ||| |||||   ||  ||||| | | ||||||  | ||||||||||||||||| ||     
T  23908254 tcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaattgg 23908155  T
Q  379 agataattcatttcaagttccaagg 403  Q
     || |||||||| ||| ||||||||    
T  23908154 ggaaaattcattccaaattccaagg 23908130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 25883301 - 25883354
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  25883301 tcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 25883354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 27374543 - 27374468
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 249  Q
    |||||||||| ||||| |||||||||| |||| | |||| ||||| ||||  | ||||||||||||||||||||||    
T  27374543 tcaatggtttaaggaagtttttgtattgttttcattcgagtcattataatccagttttatcctaaatcatgcaact 27374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 5632459 - 5632402
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||| ||| |||||||||| |||| ||| |||||| |||||||||||||||||||||    
T  5632459 tcttataaggtatttgaagataataaaaattgaagaaaattcatttcaagttccaagg 5632402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 5632614 - 5632496
Alignment:
Q  185 aggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatg 284  Q
    ||||| ||||||| || |||| | | ||||| |||||||| ||||||||| | |||||||||||||||||| |||      ||| || ||||||||||||    
T  5632614 aggaagtttttgtgttgttttcatttgattcgttgtaattcacttttatcttgaatcatgcaactccataggtgt------tttgtagtgagaaatcatg 5632521  T
Q  285 tagatcgaaaaaacaagatatcaca 309  Q
    || ||||| ||| ||||| ||||||    
T  5632520 taaatcgacaaaccaagacatcaca 5632496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 25188815 - 25188860
Alignment:
Q  209 tcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||    
T  25188815 tcgaatcattgtaattcacttttatcataaatcatgcaactccata 25188860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 23007163 - 23007071
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||| |||||| |||||||||  | ||||||| ||||   |||| ||||| ||| | |||||||||||||||||| ||||||||||| ||||    
T  23007163 gagttgtcaatgatttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactccatagatgtt 23007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 26418830 - 26418902
Alignment:
Q  259 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    |||| |||||||| |||||||||||||| |||| ||||| |||| ||| || |||||||| |||||| |||||    
T  26418830 ttgaatctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaaga 26418902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 18066001 - 18066048
Alignment:
Q  352 aagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  18066001 aagttttttgaagaaaatacaaagtgaagaaaattcatttcaacttcc 18066048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 19263804 - 19263769
Alignment:
Q  362 aagacaatacaaagtgaagataattcatttcaagtt 397  Q
    |||||||||||||||||||| |||||||||||||||    
T  19263804 aagacaatacaaagtgaagaaaattcatttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 1475196 - 1475143
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||| ||||||||||||||| |||| ||||||||||||    
T  1475196 tcttagaaggttattgaagataatacaaagtgaagaaaatttatttcaagttcc 1475143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 5632673 - 5632628
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgta 128  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||    
T  5632673 tgatgatgaaataacatatgatgtttttaactttgtttttagtgta 5632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 10341985 - 10342038
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| | |||||||||||||||||||||  | || ||||||||||||||    
T  10341985 tcttagaaggtttttgaagacaatacaaagtgagaaaaactcatttcaagttcc 10342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 321
Target Start/End: Original strand, 19285084 - 19285271
Alignment:
Q  135 tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 234  Q
    ||||||||| || |||||  |||||  || |||||||| ||||| || |||| || |||| ||||| |||| | |||| || |||||||| | |||| ||    
T  19285084 tgcatttgagggtaaattagaagtcatttagaggagttgtcaatagtatgagaaaatttt-gtattattttcattcgagtcgttgtaattcaattttgtc 19285182  T
Q  235 ctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgag 321  Q
    |||||||  |||||||| ||| ||||  |||||| |||  ||||| ||| |||| |||  ||||||||||||||| | | |||||||||    
T  19285183 ctaaatccagcaactccttaggtgtttcgagtctctttcgtgagatatcgtgtaaatcagaaaaacaagatatcaaatgtaggatcgag 19285271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 2729718 - 2729630
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||||| |||||||||  |||||| | || |||| |||| | |||| || |||||||| | |||||||||||| ||||||||| ||||    
T  2729718 aggagttgtcaatggttcaaggaacatattatattgttttcactcgagtccttgtaattcatttttatcctaaaccatgcaacttcata 2729630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 8402457 - 8402413
Alignment:
Q  356 tatttgaagacaatacaaagtgaagataattcatttcaagttcca 400  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||    
T  8402457 tatttgaagaaaatataaagtgaagaacattcatttcaagttcca 8402413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 11521376 - 11521416
Alignment:
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||| ||||||||| ||||| |||||||||||||||||    
T  11521376 ttgaagataatacaaagcgaagaaaattcatttcaagttcc 11521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 27415236 - 27415347
Alignment:
Q  219 gtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaagg 315  Q
    |||||| ||||||||| |||||||||||||| ||||| ||  |||||| |||| || | |||||||||||| || ||  || ||||| ||||||  ||||    
T  27415236 gtaattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgttttgtagtaagaaatcatgtaaatagaccaatcaagacatcacataaagg 27415335  T
Q  316 atcgaggataag 327  Q
    ||| ||||||||    
T  27415336 atcaaggataag 27415347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 83 - 403
Target Start/End: Complemental strand, 52271426 - 52271104
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||||||||||||||||| |||||| || | |||||||||||||| ||||||||| |||| ||| |   | || ||  |||||||| ||| |||||    
T  52271426 tgatgatggaataacatatgatgtttttaactatgtttttagtgtaattctttgcatttaaaggcaaaataggattcaata-gaggagttgtcattggtt 52271328  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaat 280  Q
    ||||||| ||| |||| | |||| | |  | || |||| ||| |||||  |||||||| |||||||||||||| ||||  ||||||||||| ||||||||    
T  52271327 tgaggaaatttgtgtacttttttcatttaagtcgttgtcattcactttattcctaaattatgcaactccatagatgttttgagtctttttagtgagaaat 52271228  T
Q  281 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaa 379  Q
     ||||| ||||  ||||||| |   |||  ||||||||||||||| |||||   || ||||||| | |||||||| ||||||||||||||||||||||||    
T  52271227 tatgtaaatcggcaaaacaaaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaa 52271128  T
Q  380 gataattcatttcaagttccaagg 403  Q
    || |||||||||||| ||||||||    
T  52271127 gaaaattcatttcaaattccaagg 52271104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 98 - 421
Target Start/End: Complemental strand, 26854485 - 26854161
Alignment:
Q  98 atatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgt 197  Q
    ||||||| ||||||||| ||||||||||    |||||||||||| ||   ||| |  ||||| ||| ||| |||| | |||| |||||||||||||||||    
T  26854485 atatgatgtttttagctatatttttagttattttatttgcatttaaaaacaaaatataagtcaattagagaagttgttaatgttttgaggaactttttgt 26854386  T
Q  198 attctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaa 295  Q
    |||||||| | || | || |||||||| | ||||||||||| |||| ||||| ||||| ||  |||||||||||||  ||||||||||||| | ||  ||    
T  26854385 attcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta--gagaaatcatgtaaaccggcaa 26854288  T
Q  296 aacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaa 394  Q
    ||||||| || |   |||||||| | |||| |||||   || |||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| ||    
T  26854287 aacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagtgaagaaaattcatttgaa 26854188  T
Q  395 gttccaagggattaaaagatgaaagaa 421  Q
    ||||||||| |||  |||||| |||||    
T  26854187 gttccaaggcattgcaagatggaagaa 26854161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 403
Target Start/End: Complemental strand, 19257895 - 19257665
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    |||||| ||||||||||||| |||||| |||| | || | |||||||||||   |||||||||||||||||||| ||| ||| ||  |||||| ||||||    
T  19257895 tcaatgatttgaggaactttctgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtattttta 19257796  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatac 371  Q
     ||||||||| |||| || |  | ||||||| |||||| ||| ||||||||||| |||||   ||  |||| | ||||||||| | ||||||||||||||    
T  19257795 gtgagaaatcgtgtaaattggcataacaagacatcacatgaaagatcgaggatatgaagattgaacatcaa-gttcttagaaggtctttgaagacaatac 19257697  T
Q  372 aaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||| |||| ||||||| ||||||||    
T  19257696 aaagtgaagaaaatttatttcaatttccaagg 19257665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 402
Target Start/End: Complemental strand, 15298967 - 15298731
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtc 265  Q
    ||||| |||||||||||||||| |||||||||| | || | | || ||||||||||| | |||||||| ||||||||||||| ||||| ||  ||| |||    
T  15298967 gagttgtcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaagttttatccaaaatcatgcaacttcataggtgttttgtgtc 15298868  T
Q  266 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaag 364  Q
    | |||| ||| |||||||||| ||||  ||||||||| ||||    |||||||||||||| |||||   ||  ||||| | ||||| |||||||||||||    
T  15298867 tatttagtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag 15298768  T
Q  365 acaatacaaagtgaagataattcatttcaagttccaag 402  Q
     |||||||| ||||| | ||||||||||||||||||||    
T  15298767 -caatacaatgtgaataaaattcatttcaagttccaag 15298731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 133 - 403
Target Start/End: Original strand, 25126462 - 25126735
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||| ||| |  |||||  || |||||||| ||||||||||||| || |||||||||| |||||| | || || | |||||| | |||||    
T  25126462 tttgcatttgaaggcaaaatagaagtcatttggaggagttgtcaatggtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagtttta 25126561  T
Q  233 tcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 330  Q
    ||||||||||||  | |  |||  ||||  |||||||||||||||||||||||||| ||   ||||| |||| |||||  ||||||| ||||||| || |    
T  25126562 tcctaaatcatgtgattatatatgtgttttgagtctttttaatgagaaatcatgtaaattagaaaaataagacatcacgtgaaggattgaggatatgacg 25126661  T
Q  331 acgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    || | |  ||||| | ||||||||  | |||||| |||||||||| |||||| |||||||||||||||||||||    
T  25126662 actacagatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagttccaagg 25126735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 174 - 403
Target Start/End: Original strand, 26102080 - 26102312
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    ||||||||||||||| | ||||||||| |||| | |||| |  |||||||| |||||||||||||||||||||||||||| | ||  |||||||||||||    
T  26102080 tcaatggtttgaggaccattttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactccatgggtgttttgagtcttttta 26102179  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaata 370  Q
     ||||| ||| || | ||||| ||||||||| |||||  ||| |||| |||||| |||||   ||  ||||||| | ||||||| | |||||||||||||    
T  26102180 gtgagatatcgtgcaaatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaata 26102279  T
Q  371 caaagtgaagataattcatttcaagttccaagg 403  Q
    |||  ||| || ||||||| ||||||| |||||    
T  26102280 caagttgaggaaaattcatctcaagtttcaagg 26102312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 399
Target Start/End: Complemental strand, 11770086 - 11769857
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgt--tgagtcttttta 271  Q
    |||||||||| |||||| | ||||||| |||| | |||  || |||||||| ||||||||||||||||||| |||| ||| | |||  ||||| ||||      
T  11770086 tcaatggtttaaggaacatattgtattgttttcactcgtgtcgttgtaattcacttttatcctaaatcatgaaacttcatgggtgtgttgagtgttttgc 11769987  T
Q  272 a-tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaat 369  Q
    | |||||||||||||| ||||||||| ||||| |||||| ||| |||| | |||| |||||   ||   ||||| | |||||||| | ||||||||||||    
T  11769986 agtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 11769887  T
Q  370 acaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||| |||||||||||||||||    
T  11769886 acaaagtgaagaaaattcatttcaagttcc 11769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 23223425 - 23223665
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaa-tcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttg 261  Q
    |||||||| |||||||||||||||||   ||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||| || ||  ||     
T  23223425 gaggagttgtcaatggtttgaggaacacattgtattttttttcactcgattcgttgtaatttacttttatcctaaatcatgcaactccaaaggtgttttt 23223524  T
Q  262 agtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaa-gttat 358  Q
    | | |||| || |||||||||||||| ||| | ||  ||||| ||| || ||||  || |||||| |||||   |||  |||| | || ||||| ||| |    
T  23223525 aatgttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggtttt 23223624  T
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  23223625 ttgaagacaatacaaagtgaaaaaaattcatttcaagttcc 23223665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 165 - 394
Target Start/End: Complemental strand, 25494580 - 25494357
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 264  Q
    |||||||| ||||||||||||||||| | |||| || ||||   | || || ||||||||||||||||||||||||||||||||| ||||| |||         
T  25494580 gaggagttgtcaatggtttgaggaacatattgtcttgttttctcttgagtccttgtaatttacttttatcctaaatcatgcaactacataggtgt----- 25494486  T
Q  265 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaa 363  Q
     ||| || |||||||||||||| ||||| ||| ||||| ||||||  ||||| | | |||| |||||   ||   |||| | ||||||||| | ||||||    
T  25494485 -tttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagc-aagatatgaagattgaagaccaatggttcttagaaggtttttgaa 25494388  T
Q  364 gacaatacaaagtgaagataattcatttcaa 394  Q
    |||||||||||||||||| ||||||||||||    
T  25494387 gacaatacaaagtgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 30675498 - 30675735
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | |||| || |||||||  |||||| ||||| ||||||||||||||||| ||  ||||    
T  30675498 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactccataggtgttttga 30675597  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 360  Q
    || |||| || |||||||||||||| ||||  ||   |||| ||||   |||||||| || ||  |||||   ||| ||||| | ||||||||| | |||    
T  30675598 gtgttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaaa-tcaatggttcttagaaggttttt 30675696  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  30675697 gaagataatacaaagtgaagaaaattcatttcaagttcc 30675735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 122 - 436
Target Start/End: Original strand, 21548619 - 21548936
Alignment:
Q  122 tagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgta 221  Q
    ||||||| |||||||||| |||||| |||||   |||| |||  |||||||    |||||||||| |||||||| |||| |||| | |||| || |||||    
T  21548619 tagtgtatttatttgcatatgaaggcaaattagtagtccattaaaggagttgatgatggtttgagaaactttttatattgttttcattcgagtcgttgta 21548718  T
Q  222 atttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcg 319  Q
    ||| | ||||||||||||  |||||||||||||  ||||  |||||||| || || ||||||| ||| |||| |||||||||| |||||   ||| || |    
T  21548719 attcagttttatcctaaaaaatgcaactccataagtgtttggagtctttctagtgtgaaatcaagtaaatcggaaaaacaagacatcacgtaaagaattg 21548818  T
Q  320 aggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaa 418  Q
     ||||| |||||   ||  | ||| | |||||||||  ||||||||| |||||||  |||| | ||||||||| ||||||||||| |||| |||| ||||    
T  21548819 tggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaagttgaaaaaaattcatttgaagttccaaggcattacaagacgaaa 21548918  T
Q  419 gaatggccgaaaaagggt 436  Q
    |||||   ||||||||||    
T  21548919 gaatgctagaaaaagggt 21548936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 165 - 399
Target Start/End: Original strand, 26657490 - 26657727
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||||||||  |  |||||| |||| | ||||||| |||||||| |||||||||||| |||| |||||||||||| ||  ||||    
T  26657490 gaggagttgtcaatggtttgaggaatataatgtattgttttcactcgattcgttgtaattcacttttatcctagatcacgcaactccataggtgttttga 26657589  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaat-gatcttagaagttatt 359  Q
    || |||| || ||| |||||||||| ||||| ||| ||||| || |   |||||||| ||| || ||| | ||  || ||||| | ||||| ||| | ||    
T  26657590 gtgttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcg--aagtcaatagttcttataaggtttt 26657687  T
Q  360 tgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26657688 tgaagacaaaacaaagtgaagaaaattcatttcaagttcc 26657727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 175 - 381
Target Start/End: Complemental strand, 25728000 - 25727790
Alignment:
Q  175 caatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-ta 271  Q
    ||||||||| |||||  | ||||||| |||| | || | || |||||||| ||||||||||||||||||||||||| |||| ||  |||||| |||| ||    
T  25728000 caatggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgta 25727901  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 370  Q
     |||||||||||||| ||||| ||| ||| |||||||| |||||||  |||||| |||||   ||  ||||| | |||| |||| | ||||||||||||     
T  25727900 gtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatc 25727801  T
Q  371 caaagtgaaga 381  Q
    |||||||||||    
T  25727800 caaagtgaaga 25727790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 175 - 381
Target Start/End: Complemental strand, 25736408 - 25736198
Alignment:
Q  175 caatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-ta 271  Q
    ||||||||| |||||  | ||||||| |||| | || | || |||||||| ||||||||||||||||||||||||| |||| ||  |||||| |||| ||    
T  25736408 caatggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgta 25736309  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 370  Q
     |||||||||||||| ||||| ||| ||| |||||||| |||||||  |||||| |||||   ||  ||||| | |||| |||| | ||||||||||||     
T  25736308 gtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatc 25736209  T
Q  371 caaagtgaaga 381  Q
    |||||||||||    
T  25736208 caaagtgaaga 25736198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 318
Target Start/End: Original strand, 18795163 - 18795350
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||||||||   | |||  || ||||| || ||||||||||||||||| ||||||||  |||| | | || | |||||||||||||||||    
T  18795163 tttgcatttgaaggaaaataagaggtcatttagaggatttatcaatggtttgaggaacattttgtatcgttttcatttgagtaattgtaatttactttta 18795262  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 318  Q
    |||||| |||| || || ||||| ||  ||||||| ||||| ||||||||| |||| |||   ||||||||| |||||| || |||||    
T  18795263 tcctaagtcatacagcttcataggtgttttgagtcattttagtgagaaatcgtgtaaatcagcaaaacaagacatcacatgatggatc 18795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 19884190 - 19884276
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    |||| ||||||||||||||||| |||| |||| |||| | |||||||  |||||||  |||||||||||||||||||||||||||||    
T  19884190 agttatcaatggtttgaggaaccttttatattgttttcattcgattcgatgtaattctcttttatcctaaatcatgcaactccatag 19884276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 27461266 - 27461114
Alignment:
Q  181 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaa 278  Q
    |||||||||| ||||||||| |||| | || | |  || ||||| ||||||||||||||| |||||||| ||||| ||||   |||||||||| | ||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaacttcataggtgtttgtagtctttttagtaagaa 27461167  T
Q  279 atcatgtagatc-gaaaaaacaagatatcacacgaaggatcgaggataagaag 330  Q
    ||||||||  || |||||||||||| |||||| ||| ||||||||||| ||||    
T  27461166 atcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaag 27461114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 23505947 - 23506010
Alignment:
Q  339 tcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    |||||| |||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  23505947 tcaatggtcttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttccaag 23506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 323
Target Start/End: Complemental strand, 25730663 - 25730511
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-t 270  Q
    ||||||| ||||||| | | ||||||| |||| | || | |||||| |||| | |||||||||||||||||||||| || || ||||  |||| |||| |    
T  25730663 tcaatggcttgaggagcgtattgtattgttttcattcaaatcattgaaattcaattttatcctaaatcatgcaacttcacaggtgttttgagtgttttgt 25730564  T
Q  271 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagga 323  Q
    |  ||||||||||||| ||||| ||| |||||||||||| |||||||| ||||    
T  25730563 agcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaagga 25730511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 50047195 - 50047284
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||||||| |||||| |||||| ||| | ||||||| |||| | |||| |||| |||||| |||||||||||||||||| ||||||||||    
T  50047195 gaggagttgtcaatgatttgagaaacatattgtattgttttcactcgagtcatggtaattcacttttatcctaaatcatacaactccata 50047284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 373
Target Start/End: Original strand, 31313618 - 31313777
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 314  Q
    |||||||| |||||||||||||||||||||||| ||||| ||  |||||| |||||| | |||||||||||| || | |||||||| | |||||  ||||    
T  31313618 ttgtaattcacttttatcctaaatcatgcaacttcataggtgttttgagtttttttagtaagaaatcatgtaaattggaaaaacaatacatcacgtgaag 31313717  T
Q  315 gatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaa 373  Q
    |||  || ||| |||||   ||  ||||||| ||||| ||| | ||||||||||||||||    
T  31313718 gattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 8247758 - 8247663
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||| | ||||||||||||||||| | || |||| |||| | | || ||||||||||||  ||||| |||| ||||||||||||||||| ||||    
T  8247758 gaggagatatcaatggtttgaggaacatattttattattttcacttgagtcattgtaattttgttttaccctagatcatgcaactccataggtgtt 8247663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 12810336 - 12810418
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaa 247  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | || | || |||||||| | |||||||||| |||||||||    
T  12810336 gaggagttgtcaatggtttgaggaacatattgtattgttttcattcaagtcgttgtaattcatttttatcctagatcatgcaa 12810418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 18391100 - 18391186
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    |||| ||||||||||||| ||| |||| |||| |||| | | || || |||||||| |||||||||||| ||||||||| |||||||    
T  18391100 agttgtcaatggtttgagtaacattttatattattttcatttgagtcgttgtaattaacttttatcctagatcatgcaattccatag 18391186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 12423831 - 12423778
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||||  |||||||||||||||||    
T  12423831 tcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcc 12423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 15417062 - 15416966
Alignment:
Q  177 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    |||||||||| ||| |||| |||| |||| | || ||||||| ||||| ||||||||| ||||||||||||||  |||| ||  |||||||||||||    
T  15417062 atggtttgagaaacattttttattgttttcattcaattcattttaattcacttttatcttaaatcatgcaactgtataggtgttttgagtcttttta 15416966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 30781971 - 30782011
Alignment:
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  30781971 ttgaagacaatacaaagtgaagaaaattgatttcaagttcc 30782011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 25665676 - 25665629
Alignment:
Q  356 tatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||| |||||||||||||||||||| || |||||| |||||||||||    
T  25665676 tatttaaagacaatacaaagtgaagaaaaatcatttgaagttccaagg 25665629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 12424004 - 12423926
Alignment:
Q  176 aatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||||||||||||| | |  |||| |||| | |||| ||||||||||| | ||||||| || ||||||||||||||||    
T  12424004 aatggtttgaggaacatatgatattgttttcactcgagtcattgtaattcagttttatcttagatcatgcaactccata 12423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 23519810 - 23519768
Alignment:
Q  214 tcattgtaatttacttttatcctaaatcatgcaactccatagt 256  Q
    ||||||||||| |||||||||||| |||||||||||| |||||    
T  23519810 tcattgtaattcacttttatcctagatcatgcaactctatagt 23519768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 9328365 - 9328418
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| | ||||||||    
T  9328365 tcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcc 9328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 23519685 - 23519632
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  |||||||||||| |||||||||| |||| ||||||||||||    
T  23519685 tcttagaaggttgttgaagacaatagaaagtgaagaaaatttatttcaagttcc 23519632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 21551010 - 21550930
Alignment:
Q  135 tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattc 215  Q
    |||||||||||| ||||   | ||| ||| |||||||| || |||||||||||||| ||||||||| |||| | |||||||    
T  21551010 tgcatttgaaggcaaatcagaggtcaattagaggagttgtctatggtttgaggaacattttgtattgttttcattcgattc 21550930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 50047386 - 50047426
Alignment:
Q  359 ttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  50047386 ttgaagacaatacaaaatgaagaaaattcattttaagttcc 50047426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 137 - 397
Target Start/End: Original strand, 19331497 - 19331759
Alignment:
Q  137 catttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcct 236  Q
    ||||||||||||||||  || || ||| |||||||| ||||| ||||||| ||||||||||||| | || | |||| || |||||||||| |||||||||    
T  19331497 catttgaaggaaaattagaattcaattagaggagttgtcaattgtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcct 19331596  T
Q  237 aaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcg-aaaaaacaagatatcacacgaaggatcgaggataagaagacgaa 335  Q
    ||||||||||| |||||   | ||||||||||||  |||||||||||||| ||||  ||||||||   ||||   ||||||||||||||| |||||   |    
T  19331597 aaatcatgcaattccatgtgttttgagtcttttttgtgagaaatcatgtaaatcgttaaaaacaaagcatcaagtgaaggatcgaggatatgaagattga 19331696  T
Q  336 aattcaatga-tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 397  Q
    |||||||||| | |||||||  ||||||||||||||||| |||||||||| |||||| |||||    
T  19331697 aattcaatgatttttagaagacatttgaagacaatacaatgtgaagataagtcatttgaagtt 19331759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 82 - 260
Target Start/End: Complemental strand, 23157975 - 23157794
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagct---ttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaat 178  Q
    ||||||||||||||||||||||| ||||| |||   || ||||||||    || ||||||||||||||||||||  ||||| ||| |||||||| |||||    
T  23157975 ttgatgatggaataacatatgatgttttttgctatgttttttttagttattttctttgcatttgaaggaaaattagaagtcaattagaggagttgtcaat 23157876  T
Q  179 ggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||||||||||| ||||| |||| | | || || |||||||| ||||||||| |||||||||||| | ||||| ||||    
T  23157875 ggtttgaggaacttttggtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaaatgcataggtgtt 23157794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 317
Target Start/End: Original strand, 20694572 - 20694808
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctattt-gaggagttttcaatggt 181  Q
    |||| |||||| | ||||||||| ||| |||| | ||||||||    |||||||||||| |||||||||| ||||  ||||| ||||| || ||||||||    
T  20694572 tgataatggaacatcatatgatactttaagctatgtttttagttattttatttgcatttaaaggaaaattaaaaga-tatttagaggatttgtcaatggt 20694670  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 279  Q
    ||||||||||||||||||| |||| | |||| ||||||||||| | |||||||| |||| || ||||| ||||  ||  ||||||||||||| | |||||    
T  20694671 ttgaggaactttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgttttgagtctttttagtaagaaa 20694770  T
Q  280 tcatgtagatcgaaaaaacaagatatcacacgaaggat 317  Q
    ||||||| ||||  ||||||||| |||| | |||||||    
T  20694771 tcatgtaaatcggcaaaacaagacatcatatgaaggat 20694808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 168 - 402
Target Start/End: Complemental strand, 7742967 - 7742730
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtc 265  Q
    ||||| |||||||||||| |||| ||||||||| ||||   |||| || |||||||| ||||||||||||||||||| ||   ||||  ||||  ||||     
T  7742967 gagttgtcaatggtttgaagaacattttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatgtaaaatcatatgtgttttgagtt 7742868  T
Q  266 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaag 364  Q
    ||||||||||||||||||||| |||   ||||||| | |||||  |||| ||||| |||| ||||||  ||  |||||| | |||||||| | |||||||    
T  7742867 tttttaatgagaaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaag 7742768  T
Q  365 acaatacaaagtgaagataattcatttcaagttccaag 402  Q
    ||||||||||||||||| || || ||||||||| ||||    
T  7742767 acaatacaaagtgaagaaaaatcgtttcaagtttcaag 7742730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 168 - 435
Target Start/End: Complemental strand, 19763988 - 19763713
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctt 267  Q
    ||||| |||| |||||| ||||||||||||||| |||| | | ||  || |||| || | |||||||||||||||||||||| |||   | |||||||||    
T  19763988 gagttctcaagggtttgtggaactttttgtattgttttcatttgaggcaatgtagttcagttttatcctaaatcatgcaacttcatgtgttttgagtctt 19763889  T
Q  268 tttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaat-------gatcttagaagttatt 359  Q
    |||| |||||||||||||| ||||  ||||| ||| ||||   |||| ||| |||| | |||||  ||| ||| ||        | ||||||||| | ||    
T  19763888 tttagtgagaaatcatgtaaatcggcaaaacgagacatcaagtgaagaatcaaggaaatgaagattgaagattgaagatcaagggttcttagaaggtttt 19763789  T
Q  360 tgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 435  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| |  ||||||||||    
T  19763788 tgaagataatacaaagtgaagaaaattcatttcaagttccaaaggattgaaagatggaagaacgctcgaaaaaggg 19763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 26070488 - 26070656
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| |||||  |||||||||  ||| ||||| |||| | |||| | | ||||||| | ||||||| |||||||||||||||||||  ||||  ||    
T  26070488 gaggagttgtcaatcatttgaggaaaatttagtattgttttcattcgagttaatgtaattcagttttatcataaatcatgcaactccataagtgttttga 26070587  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||||| |||||||||||||| || |  ||||||||| |||||| |||||||| |||||| |||||    
T  26070588 gtctttttagtgagaaatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaaga 26070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 165 - 325
Target Start/End: Original strand, 24841767 - 24841930
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--a 262  Q
    |||||||||||||||||||||||||| | ||||||| |||| | |||| || |||||| | |||||||||||| |||||| |||||||||| ||||   |    
T  24841767 gaggagttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactccataggtgttttta 24841866  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    || |||| || |||||||||||||| || |||||| ||||| | |||  |||||||| ||||||    
T  24841867 gtgttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggata 24841930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 217 - 399
Target Start/End: Complemental strand, 26330116 - 26329933
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 314  Q
    ||||||||  ||||||||||| ||||||||||| ||||| ||||  |||| ||||  | | ||||||||||| || |||||| ||||| |||||| ||||    
T  26330116 ttgtaattcccttttatcctagatcatgcaacttcataggtgttttgagtgttttgta-gtgaaatcatgtaaattgaaaaatcaagacatcacatgaag 26330018  T
Q  315 gatcgaggataagaagacgaaaattcaatgatc-ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||| |||||| |||||   || | ||||| || ||||||| | ||| |||||||||||||||||||| |||||||||||||||||    
T  26330017 gatcaaggatatgaagattgaagt-caatggtccttagaaggttttttaagacaatacaaagtgaagaaaattcatttcaagttcc 26329933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 399
Target Start/End: Complemental strand, 11274369 - 11274193
Alignment:
Q  227 cttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagga 323  Q
    ||||||||||||||||||||||||||||| ||  |||||| |||| || | |||||||||||| ||||| ||| ||||| |||||| |||||||| ||||    
T  11274369 cttttatcctaaatcatgcaactccataggtgttttgagtgttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaagga 11274270  T
Q  324 taagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    || |||||   ||   |||| | ||||||||| | ||||||||||||||||  ||| || | |||||||||||||||    
T  11274269 tatgaagattgaagaccaatggttcttagaaggtctttgaagacaatacaagatgatgaaatttcatttcaagttcc 11274193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 18222510 - 18222602
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||| ||||||||||||| ||| | ||||||| |||| | |||| ||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  18222510 gagttgtcaatggtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatcctaaatcatgcaaatccataggtgtt 18222602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 20083448 - 20083586
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||| ||||| ||| | |||| |||||||| ||||| ||||||||||| |||| |||| |||||| |||| |  |||||||| | || ||    
T  20083448 tttgcatttgaaggcaaattaaaaat-tattagaggagttgtcaatagtttgaggaacattttttattgtttttattcgagtatttgtaattcagttcta 20083546  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtcttttt 270  Q
    ||||||||||||||| ||||||| ||  ||||||||||||    
T  20083547 tcctaaatcatgcaattccataggtgttttgagtcttttt 20083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 391
Target Start/End: Original strand, 25367671 - 25367836
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    ||||||| |||||||||||||| ||||| ||||  ||||||||||| |||||||||||||| |||| ||||  |||  |||||| |||  ||||| ||||    
T  25367671 ttttatcataaatcatgcaacttcataggtgttttgagtctttttagtgagaaatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgata 25367770  T
Q  326 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcattt 391  Q
     |||||  ||| |||||| | |||||||||  ||||||||| |||| |||||||||| |||||||||    
T  25367771 cgaagattaaagttcaatggttcttagaagacatttgaaga-aatagaaagtgaagaaaattcattt 25367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 399
Target Start/End: Original strand, 17027550 - 17027778
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttt--- 270  Q
    |||| |||||||||||| | ||| ||| |||| | | || || |||||||| ||||||||||||||||| |||||||||||| ||||  | || |||       
T  17027550 tcaagggtttgaggaacatattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactccataggtgttttgactgttttgc 17027649  T
Q  271 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatg-atcttagaagttatttgaagacaat 369  Q
     ||||||||||||||| ||||||||| ||||| |||||  | | |||| | |||| |||||   || || ||||  ||||||||| |  |||||||||||    
T  17027650 catgagaaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaat 17027748  T
Q  370 acaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||| |||| ||||||| ||||    
T  17027749 acaaagtgaagaaaattaatttcaatttcc 17027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 165 - 399
Target Start/End: Complemental strand, 25594793 - 25594556
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    ||||| || ||||||||||||||||| | ||||||| |||| | | || |  ||||| || | ||||||||||||| |||||||| ||||  ||||  ||    
T  25594793 gaggatttctcaatggtttgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaacttcatatgtgttttga 25594694  T
Q  263 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 360  Q
    || |||| || |||||||||||||| |||||||||  |||| |||||| ||| |||| |||||| |||||   ||  ||||| ||| ||||||| | |||    
T  25594693 gtgttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggttttt 25594594  T
Q  361 gaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    | ||| ||| ||||||||||| |||||| ||||||||||    
T  25594593 gtagataatgcaaagtgaagaaaattca-ttcaagttcc 25594556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 166 - 398
Target Start/End: Complemental strand, 16622767 - 16622541
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtc 265  Q
    ||||||| ||||||||||||||||| | ||||||| | || | || |||  |||||||  |||||||||||| ||||||||||| ||||| |||          
T  16622767 aggagttgtcaatggtttgaggaacatgttgtattgtattcactctatttgttgtaatacacttttatcctagatcatgcaacttcataggtgt------ 16622674  T
Q  266 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaag 364  Q
    |||  | |||||||||||||| || || ||| ||||| |||||| |||||||  |||||| |||||   ||   || | | ||||||||| | |||||||    
T  16622673 tttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaaggt-tttgaag 16622575  T
Q  365 acaatacaaagtgaagataattcatttcaagttc 398  Q
    |||||||||| |||||| ||||||||||||||||    
T  16622574 acaatacaaattgaagaaaattcatttcaagttc 16622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 165 - 324
Target Start/End: Complemental strand, 24411030 - 24410869
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||||||||  ||||||||| |||| | | || || |||||||| | |||||||||||||| |||||||    || ||  ||||    
T  24411030 gaggagttgtcaatggtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttga 24410931  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 324  Q
    || |||||| |||||||||||||  || |  |||| |||| |||||| ||||||||||||||    
T  24410930 gtatttttagtgagaaatcatgtcaattggcaaaataagacatcacatgaaggatcgaggat 24410869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 25680616 - 25680705
Alignment:
Q  171 ttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||||||||||||||| | ||||||| |||| | |||| || |||||||| | |||||| ||||||||||||||| ||||| ||||    
T  25680616 ttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgcaacttcataggtgtt 25680705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 16634063 - 16634155
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||| ||||||||||||| ||| | ||||||| |||| | |||| || |||||||| |||||||| |||||||||||||||| |||| ||||    
T  16634063 gagttgtcaatggtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaactctataggtgtt 16634155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 17382136 - 17382052
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 249  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | || | || ||||| || ||||||||||||||||||||||||    
T  17382136 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcaaatcgttgtatttcacttttatcctaaatcatgcaact 17382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 403
Target Start/End: Original strand, 18178166 - 18178357
Alignment:
Q  217 ttgtaatttacttttatcctaaatcat-gcaactccatagttgttg--agtctttttaatgagaaatcatgtaga-tcgaaaaaacaagatatcacacga 312  Q
    |||||||| | |||||||||||||||| |||||| ||||| | ||   |||||||||| |||||||||||||| | | |||||||||||| | | || ||    
T  18178166 ttgtaattcagttttatcctaaatcattgcaacttcataggtatttttagtctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgcatga 18178265  T
Q  313 aggatcgaggataagaaga-cgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||||||||||| |||||  ||| |   | || |||| |||| | |||||||| |||||||| |||| | ||||||| |||||||||||||    
T  18178266 aggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcatctcaagttccaagg 18178357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 22644047 - 22643924
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    ||||||| ||||||||||| |||||||||| | ||||||||||    || |||| |||||||||||||||  |||||  || |||||||| |||||||||    
T  22644047 tgatgattgaataacatataatatttttaggtatatttttagttattttctttgtatttgaaggaaaattagaagtcatttagaggagttgtcaatggtt 22643948  T
Q  183 tgaggaactttttgtattcttttt 206  Q
    |||  |||||| ||| || |||||    
T  22643947 tgattaactttgtgtttttttttt 22643924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 24517368 - 24517463
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| ||||||||||||||||| | ||||||| |||| |  ||| || |||||||| || |||||||| ||||||| |||||||||| ||||    
T  24517368 gaggagttgtcaatggtttgaggaacatattgtattgttttcacccgagtcgttgtaattcacatttatccttaatcatgtaactccataggtgtt 24517463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 312 - 402
Target Start/End: Complemental strand, 18873002 - 18872912
Alignment:
Q  312 aaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    |||||| ||||||| ||||| | || ||||||||  ||||| | || |||||||||||||||| |||||| ||||||||| ||||||||||    
T  18873002 aaggatggaggatatgaagatggaagttcaatgagtttagacggtagttgaagacaatacaaattgaagaaaattcatttgaagttccaag 18872912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 24268581 - 24268655
Alignment:
Q  177 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactcc 251  Q
    |||||||||||||| | ||||||| |||| | |||| ||||| ||||| |||||||||||| |||||||||||||    
T  24268581 atggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24268655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 24345210 - 24345284
Alignment:
Q  177 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactcc 251  Q
    |||||||||||||| | ||||||| |||| | |||| ||||| ||||| |||||||||||| |||||||||||||    
T  24345210 atggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24345284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 15205658 - 15205752
Alignment:
Q  166 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||||| ||| ||||||||||||| | ||||||| |||| | |||| || |||||||| | |||| ||||| ||||||||| ||||||| ||||    
T  15205658 aggagttgtcagtggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaattccataggtgtt 15205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 25367555 - 25367621
Alignment:
Q  86 tgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaatt 152  Q
    ||||||||||||||||||  |||||| || | |||||||| || || ||||||||||||||||||||    
T  25367555 tgatggaataacatatgacgtttttaactatgtttttagtatatttctttgcatttgaaggaaaatt 25367621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 22643821 - 22643746
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaa 421  Q
    ||||| ||| |||||||| |||||||||| |||||| ||||||||||||  ||||||| |||  |||| |||||||    
T  22643821 tcttaaaaggtatttgaatacaatacaaactgaagaaaattcatttcaaactccaaggtattgcaagacgaaagaa 22643746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 12340115 - 12340026
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||||||| ||||||||||||||||| | || |||| |||| | | |  ||||||||||| | |||||| ||| ||||||||||| ||||    
T  12340115 gaggagttgtcaatggtttgaggaacatattatattattttcacttgtgtcattgtaattcagttttatactagatcatgcaacttcata 12340026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 11997968 - 11997900
Alignment:
Q  192 ttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||||||| |||||| ||   |||||| ||||| ||||||| ||||||||||||||| ||||| ||||    
T  11997968 ttttgtattgtttttattcaggtcattgcaatttccttttatactaaatcatgcaacttcataggtgtt 11997900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 397
Target Start/End: Complemental strand, 18452709 - 18452677
Alignment:
Q  365 acaatacaaagtgaagataattcatttcaagtt 397  Q
    ||||||||||||||||| |||||||||||||||    
T  18452709 acaatacaaagtgaagaaaattcatttcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 30072330 - 30072366
Alignment:
Q  362 aagacaatacaaagtgaagataattcatttcaagttc 398  Q
    |||||||||||||||||||| | ||||||||||||||    
T  30072330 aagacaatacaaagtgaagaaatttcatttcaagttc 30072366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 83 - 331
Target Start/End: Original strand, 19540969 - 19541219
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaatt-gaaagtctatttgaggagttttcaatggt 181  Q
    ||||||||||| | ||||||| ||||||  || | ||||||||    || |||||||||||||||||||| |||  | ||| | ||||||| | ||||||    
T  19540969 tgatgatggaacatcatatgagatttttgcctatgtttttagttattttctttgcatttgaaggaaaattagaatttatatat-aggagttgttaatggt 19541067  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 279  Q
    |||||||||||||||||||  ||| |||||| ||||||||||| | |||||||||||||||||||||||||||| ||  |||||||||| || |||||||    
T  19541068 ttgaggaactttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactccataggtgttttgagtctttctagtgagaaa 19541167  T
Q  280 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||| ||||  |||| |||| ||||   ||||||||||||||| |||||    
T  19541168 tcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaaga 19541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 29647728 - 29647577
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||| |||||  ||||| ||| ||| |||| ||| || ||    
T  29647728 tgatgatggaataacatatgatgtttttagctatgttgttagtgtaattatttgcatttgaaggcaaattagaagtcaattagagtagttgtcattgatt 29647629  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 234  Q
    ||||||||||||| |||| |||| | | || || |||||||| |||||||||    
T  29647628 tgaggaactttttatattgttttcatttgagtcgttgtaattcacttttatc 29647577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 165 - 326
Target Start/End: Complemental strand, 21849174 - 21849011
Alignment:
Q  165 gaggagttt-tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttg 261  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||   | || ||||||||||| | ||||||| ||||||||||||||||||||  || |||    
T  21849174 gaggagtttgtcaatggtttgaggaacattttgtattgttttcttt-gagtcattgtaattcagttttatcataaatcatgcaactccataggatttttg 21849076  T
Q  262 agtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataa 326  Q
    |||||||||| |||||||| ||||| |||| || ||||||| |||||| |||||||| |||||||    
T  21849075 agtctttttagtgagaaataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataa 21849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 27918165 - 27917989
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||||||||||||||||||||||||||| | |||| | ||||||| |||||||||||||| |||||  || || | |  ||||||| ||| |||||    
T  27918165 tgatgatggaataacatatgatatttttagctatgttttaa-tgtaattctttgcatttgaaggcaaattagaattcaactataggagttgtcattggtt 27918067  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| ||  ||||| |||| | | || || |||||||| |||||||| ||||||||||||||||||||| ||||    
T  27918066 tgaggaacgttgggtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactccataggtgtt 27917989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 169 - 435
Target Start/End: Complemental strand, 18236399 - 18236130
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtct 266  Q
    |||| ||||||||||||| |||  ||| |||| |||| | |||| |  || ||||| ||||||||| ||||||||||||||||||| || | ||||||||    
T  18236399 agttgtcaatggtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactccataagtattttgagtct 18236300  T
Q  267 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaaga 365  Q
    ||||| ||||||||||||||  |||  ||||||||| |||||| ||||||||    ||| |||||   ||   |||| | ||||||||| |  |||||||    
T  18236299 ttttagtgagaaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaaga 18236200  T
Q  366 caatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 435  Q
    ||||||||  |||||| |||||||||||||||| |||| ||| ||||| | |||||||  ||||||||||    
T  18236199 caatacaagatgaagaaaattcatttcaagttcaaaggcatttaaagacggaagaatgatcgaaaaaggg 18236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 95 - 331
Target Start/End: Original strand, 24047326 - 24047564
Alignment:
Q  95 aacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctattt-gaggagttttcaatggtttgaggaacttt 193  Q
    |||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||   | || ||||| ||| | || |||||||||| |||||| ||    
T  24047326 aacatatgatattttaggctatgtttttagttattttatttgcatttgaaggaaaataagaggt-tatttagagaaattgtcaatggtttaaggaacatt 24047424  T
Q  194 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaatcatgtagatcg 291  Q
    ||||||| |||| | |||| ||||||||||| ||||||||||||||| ||||||||||||||   | ||| ||| ||||| ||||||||| |  | ||||    
T  24047425 ttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactccataggcattttgggtcattttagtgagaaatcctacaaatcg 24047524  T
Q  292 aaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
      ||||||||| ||| || |||||||| |||||| |||||    
T  24047525 gcaaaacaagacatcccatgaaggatcaaggatatgaaga 24047564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 228 - 398
Target Start/End: Complemental strand, 17415201 - 17415028
Alignment:
Q  228 ttttatcctaaatcatgcaactc-catagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 324  Q
    ||||||| ||||| ||||||||| ||||| ||||  ||||||||||| ||||||||| |||| ||||  ||||||||| |||||  |||||||||||||     
T  17415201 ttttatcgtaaataatgcaactctcataggtgttttgagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggac 17415102  T
Q  325 aagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttc 398  Q
    | |||||   |||| ||||| | ||||| |||||||||||||||| | |||||||||| ||||||||||||||||    
T  17415101 atgaagattgaaat-caatggttcttaggagttatttgaagacaacaaaaagtgaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 286
Target Start/End: Complemental strand, 22388924 - 22388735
Alignment:
Q  94 taacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaacttt 193  Q
    ||||||||||| ||||||||| | |||||||     || |||||||||||||| |||||  ||||| ||| |||||||| |||||  |||||||||||||    
T  22388924 taacatatgatgtttttagctatgtttttagatattttctttgcatttgaaggcaaattagaagtcaattagaggagttgtcaataatttgaggaacttt 22388825  T
Q  194 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgta 286  Q
    || |||| |||| | | || ||||||||||  | ||||||||| |||||||||||| |||  || ||||||||||| | ||||||||||||||    
T  22388824 tt-tattgttttcatttgagtcattgtaatccagttttatcctgaatcatgcaacttcat--tttttgagtcttttcagtgagaaatcatgta 22388735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 17415322 - 17415211
Alignment:
Q  139 tttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaa 238  Q
    ||||||||||||||  |||||  || |||||||| ||||||| |||||||| |||||||||| |||| | |||||| ||||||||||| ||||||| |||    
T  17415322 tttgaaggaaaattagaagtcatttagaggagttgtcaatgggttgaggaaatttttgtattgttttcattcgattgattgtaatttagttttatcgtaa 17415223  T
Q  239 atcatgcaactc 250  Q
    || |||||||||    
T  17415222 ataatgcaactc 17415211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 21843103 - 21843008
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    ||||||||  ||||||||| |||||| | ||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  21843103 gaggagttgccaatggttttaggaacatgttgtattgttttcattcgagtcattgtaatttacttttatcctaaatcatgcaactctataggtgtt 21843008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 118 - 307
Target Start/End: Original strand, 22510914 - 22511104
Alignment:
Q  118 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 217  Q
    |||||||||||||| |||||||||||||| |||||  ||||  ||| |||||| || || |||||| |||||| ||||||||| |||| | |||| ||      
T  22510914 tttttagtgtaattttttgcatttgaaggcaaattataagtaaattagaggagcttccattggttttaggaac-ttttgtatttttttcattcgagtcgc 22511012  T
Q  218 tgtaatttacttttatcctaaatcatgcaactccatagt-tgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatca 307  Q
    |||||||||| ||||||||||||  |||||||  ||||| | |||| | |||| || |||||||||||||| ||||||||| ||||| ||||    
T  22511013 tgtaatttacgtttatcctaaattgtgcaactatatagtgttttgattgttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatca 22511104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 403
Target Start/End: Complemental strand, 27417303 - 27417122
Alignment:
Q  226 acttttatcctaaatcatgcaactccatagttgttg--agtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagg 322  Q
    |||||||||||||||||||||||||||||| ||||   ||| |||| || |||||||||||||| ||||| ||| ||||| |||||| |||||||| | |    
T  27417303 acttttatcctaaatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatg 27417204  T
Q  323 ataagaa-gacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||| ||| |  ||| |  |||| | ||| ||||| | |||||| ||||||||||||||||| |||||||||||||||||||||    
T  27417203 atatgaatgttgaaga-ccaatggttctaagaaggtttttgaaaacaatacaaagtgaagaaaattcatttcaagttccaagg 27417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 403
Target Start/End: Complemental strand, 34063937 - 34063700
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttt- 270  Q
    ||||||||||| ||||||||||||||| |||| | |||| |  |||||||| ||| ||||||||||||||||||||||| |  ||  |||||| |||||     
T  34063937 tcaatggtttgtggaactttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagtttttttt 34063838  T
Q  271 ----aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaaga 365  Q
        | |||||| ||||||| ||||  ||||||||| |||    |||||||||| |||| |||||   || ||  || | | |||||||  |||||||||    
T  34063837 tttgagtgagaattcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagatttaattttgatggttattagaagacatttgaaga 34063738  T
Q  366 caatacaaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  34063737 caatacaaagtgaagaaaattcatttgaagttccaagg 34063700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 402
Target Start/End: Original strand, 18818723 - 18818956
Alignment:
Q  177 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--agtctttttaatg 274  Q
    ||||||| |||||| |||| |||| |||| | | || || ||| |||||| ||||||| |||||||||||| |||||||  |||   |||||||||| ||    
T  18818723 atggtttaaggaacattttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattg 18818822  T
Q  275 agaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataaga-----agac-gaaaattcaatgatcttagaagttatttgaagacaa 368  Q
    |||||||||||| ||||  ||||||||  |||||  |||||||  |||||| ||     | || ||| ||| |  | ||||||||| | |||||||||||    
T  18818823 agaaatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaa 18818922  T
Q  369 tacaaagtgaagataattcatttcaagttccaag 402  Q
    ||||||||||||| |||||| |||||||||||||    
T  18818923 tacaaagtgaagaaaattcaattcaagttccaag 18818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 259 - 403
Target Start/End: Complemental strand, 14922043 - 14921898
Alignment:
Q  259 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagtta 357  Q
    ||||||||||||  |||||||||||||| |||| |||||||| | ||||   |||| |||||||||| |||||   || ||||||| | |||||||| ||    
T  14922043 ttgagtctttttcgtgagaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggta 14921944  T
Q  358 tttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    | || ||||||||||||||||||| || |||||| || ||||||||    
T  14921943 tatgtagacaatacaaagtgaagaaaaatcatttgaatttccaagg 14921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 21844730 - 21844646
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 249  Q
    |||||||| |||||||||| |||||| | || |||| |||| | |||| ||||||||||||||| ||||||||||||||||||||    
T  21844730 gaggagttgtcaatggttttaggaacatgttatattgttttcattcgagtcattgtaatttactcttatcctaaatcatgcaact 21844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 308
Target Start/End: Complemental strand, 17240950 - 17240812
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttt 268  Q
    |||| ||||| ||||||||| |||||| |||| |||| | |||| || | |||||||| |||||| ||||||||||||||| ||||| |||||||| |||    
T  17240950 agttgtcaatagtttgagga-ctttttctattgttttcattcgagtcgtcgtaatttagttttattctaaatcatgcaacttcataggtgttgagtgttt 17240852  T
Q  269 ttaatgagaaatcatgtagatcgaaaaaacaagatatcac 308  Q
    ||| ||| ||||||| || || |  ||||||||| |||||    
T  17240851 ttagtgaaaaatcatataaattggcaaaacaagacatcac 17240812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 21505236 - 21505078
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 266  Q
    |||| ||||||||||||||| | | ||||||| |||| | |||| || || |||||||||||||||||||||||||||||| | ||| ||  |||||| |    
T  21505236 agttgtcaatggtttgaggagcatattgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaacttcttagatgttttgagtgt 21505137  T
Q  267 ttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 324  Q
    ||| || |||| ||||||||| ||||| |||  |||| |||||| ||| |||| |||||    
T  21505136 tttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggat 21505078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 35031716 - 35031811
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| | ||||||||||||||| | ||||||| |||| | |||| || |||||| |||||||||||||| ||||||||| ||||||| ||||    
T  35031716 gaggagttgttaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaattccataggtgtt 35031811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 17152167 - 17152252
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactc 250  Q
    |||||||| ||||||||||||||||  ||||||||| |||| | |||| || |||||||| ||||||||| ||| |||||||||||    
T  17152167 gaggagttgtcaatggtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactc 17152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 403
Target Start/End: Original strand, 24187993 - 24188224
Alignment:
Q  178 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaat---catgcaactccatagttgtt--gagtctttt-ta 271  Q
    |||||| |||||||||||||||| | || | |||| ||||||| ||| |||||||||||||||   ||| |||||||| |  ||||  |||| |||| ||    
T  24187993 tggtttaaggaactttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtattttgta 24188092  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaat-gatcttagaagttatttgaagacaat 369  Q
     |||||||||||||| |||||  || ||||  |||||| |||||||| || ||| |||||  ||| |  |||| ||||||||||  | ||||||||||||    
T  24188093 gtgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga--caatagatcttagaaagtttttgaagacaat 24188190  T
Q  370 acaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||||||||||  ||||||| ||||| ||||||    
T  24188191 acaaagtgaagaagattcattccaagtgccaagg 24188224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 30705268 - 30705321
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttt 270  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  30705268 ttgtaatttacttttatcctaaatcatgcaacttcataggtgttgagtcgtttt 30705321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 1732661 - 1732804
Alignment:
Q  259 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagtta 357  Q
    ||||||||||||  | |||||||||||| || || ||||||||| |||||| |||||||  || ||| |||||   ||  |||||||| |||||||  ||    
T  1732661 ttgagtctttttggtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatata 1732760  T
Q  358 tttgaagacaatacaaagtgaagataattcatttcaagttccaa 401  Q
    ||||||| ||||||||| |||| | |||| ||||||||||||||    
T  1732761 tttgaaggcaatacaaaatgaataaaatttatttcaagttccaa 1732804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 318
Target Start/End: Original strand, 39730474 - 39730616
Alignment:
Q  178 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatga 275  Q
    |||||| |||||| |||| |||  |||||| || | || |||||||| |||||||||||||||||||||||||   || ||  |||||| |||||| |||    
T  39730474 tggtttaaggaacattttctatagtttttattcaagtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttttagtga 39730573  T
Q  276 gaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 318  Q
    |||||||| || |||   ||||||||| |||||| ||||||||    
T  39730574 gaaatcatataaatcagcaaaacaagacatcacatgaaggatc 39730616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 398
Target Start/End: Original strand, 30998788 - 30999021
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtc 265  Q
    ||||| ||||||||||||||||| | ||||||| |||| | | || || ||||| || | |||||||||| ||||| ||||||||||| ||  ||||||     
T  30998788 gagttgtcaatggtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatacaactccataggtgttttgagtg 30998887  T
Q  266 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaag 364  Q
    |||| || |||  | | ||||| ||||| ||| ||||||||||   |||||||| |||||| | |   ||| ||  |  | ||||||||| |  ||||||    
T  30998888 ttttgtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgtaattgaagatcaagggttcttagaaggttgttgaag 30998987  T
Q  365 acaatacaaagtgaagataattcatttcaagttc 398  Q
    ||||||||||||| ||| ||||||||||||||||    
T  30998988 acaatacaaagtggagaaaattcatttcaagttc 30999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 16593667 - 16593614
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  16593667 tcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 16593614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 22525736 - 22525679
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    ||||||||| ||||||||||||| |||||||||||| |||| |||||||||| |||||    
T  22525736 tcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtttcaagg 22525679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 32276646 - 32276526
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||||||||   | |||  ||  ||||| | |||||||||||| |||| ||||| ||| |||||| |||| ||||||||||| |  ||||    
T  32276646 tttgcatttgaaggaaaataagaggtcatttaaaggagatgtcaatggtttgaagaacattttgcattgtttttattcgagtcattgtaattgaagttta 32276547  T
Q  233 tcctaaatcatgcaactccat 253  Q
    | ||||||||| |||||||||    
T  32276546 ttctaaatcattcaactccat 32276526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 28278524 - 28278434
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    ||||| || |||||||||||| |||| |  |||||| |||| | | || || |||||||| |||||||||||| |||||||||||||||||    
T  28278524 gaggatttctcaatggtttgaagaacatagtgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactccatag 28278434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 25474235 - 25474288
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  |||||||||||| |||||||||| ||||||||||| |||||    
T  25474235 tcttagaaggttgttgaagacaatataaagtgaagaaaattcatttcaggttcc 25474288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 15829205 - 15829233
Alignment:
Q  226 acttttatcctaaatcatgcaactccata 254  Q
    |||||||||||||||||||||||||||||    
T  15829205 acttttatcctaaatcatgcaactccata 15829233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 226 - 402
Target Start/End: Original strand, 17187250 - 17187427
Alignment:
Q  226 acttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||| ||||| |||| || | ||||   ||| ||| |||||||    
T  17187250 acttttatcctaaatcatgcaacttcataggtgttgagtctttttagtgataaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggata 17187349  T
Q  326 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
     |||||   || |||| | | ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  17187350 tgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagtaaagaaaattcatttcaagtttcaag 17187427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 118 - 402
Target Start/End: Original strand, 19601765 - 19602052
Alignment:
Q  118 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 217  Q
    |||||||||||||| ||||||||| |||| ||||| |||||| ||| |||||||| ||| |||||||||||||||||| |||| |||| | || | |  |    
T  19601765 tttttagtgtaattctttgcatttaaaggcaaattaaaagtcaattagaggagttgtcattggtttgaggaactttttctatttttttcattcaaattgt 19601864  T
Q  218 tgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 314  Q
    ||||||| ||||||||||||||||||||||||||||||   | || ||  |||| || |||||||||||||| ||| | ||| ||||| |||||  |||     
T  19601865 tgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtgaaa 19601964  T
Q  315 gatcgaggataagaaga-cgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    ||||||||||| || ||  ||| |  |||| | ||||| ||| | ||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  19601965 gatcgaggatatgatgattgaaga--caatggttcttaaaaggtttttgaagacaataaaaagtggagaaaattcatttcatgttccaag 19602052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 228 - 403
Target Start/End: Complemental strand, 31859938 - 31859760
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    |||||||||||||||||||||| ||||| ||||  ||||||||||| |||||||||||||| |||   ||||||||| | ||   |||||||||||||||    
T  31859938 ttttatcctaaatcatgcaactgcataggtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggata 31859839  T
Q  326 agaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
     ||| |   ||  |||||| | |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  31859838 tgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtgaagaaaatttatttcaagttccaagg 31859760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 83 - 403
Target Start/End: Original strand, 29437401 - 29437716
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    |||||||  ||||||||||||| ||||| |  || ||||||||    || |||| ||||||||| |||||  || || ||| || ||||| ||||| |||    
T  29437401 tgatgatataataacatatgatgttttttgggttgtttttagttattttctttgtatttgaaggcaaattagaactcaattagatgagttgtcaatagtt 29437500  T
Q  183 tgaggaactttttgtattcttttt--aatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaa 278  Q
    ||||||| ||||||  || |||||  | |||| |  | |||||| | |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  29437501 tgaggaattttttgattttttttttcattcgagtattcgtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttttaatgagaa 29437600  T
Q  279 atcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtga 378  Q
    |||||||| ||||  || |||||| |||||  ||||||||||||||| |||||   || |||||||         ||| || ||||||||||||||||||    
T  29437601 atcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatg---------gttcttagaagacaatacaaagtga 29437691  T
Q  379 agataattcatttcaagttccaagg 403  Q
    ||| | ||||||| |||||||||||    
T  29437692 agaaacttcatttgaagttccaagg 29437716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 174 - 403
Target Start/End: Original strand, 23353646 - 23353873
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat-agt-tgttgagtcttttta 271  Q
    |||||||||| |||||||||||||||| |||| | |||| || |||||||| | ||||||  |||||| ||||  | ||| ||| | |||||||||||||    
T  23353646 tcaatggtttaaggaactttttgtattgttttcattcgagtcgttgtaattcaattttata-taaatcgtgcacattcatgagtgttttgagtcttttta 23353744  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatac 371  Q
     |||||||||||||| ||||  ||||||||| |||||| |||||| | |||||| |||||  |||  |||||  |  |||||| | ||| ||||||||||    
T  23353745 gtgagaaatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaatagt--tagaaggtcttttaagacaatac 23353841  T
Q  372 aaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||| |||||||||||||||||||||    
T  23353842 aaagtgaagaaaattcatttcaagttccaagg 23353873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 331
Target Start/End: Original strand, 10576479 - 10576635
Alignment:
Q  177 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatg 274  Q
    ||||||||| |||| ||||||||| |||| | |||| ||||||||||| |||||||| |||||| || ||||| ||||| ||  |||| ||||| || ||    
T  10576479 atggtttgaagaacattttgtattgttttcattcgagtcattgtaattcacttttattctaaattatacaacttcataggtgttttgattctttctagtg 10576578  T
Q  275 agaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    |||||| ||||| |||| |||||||||| ||||   ||||||||||||||| |||||    
T  10576579 agaaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaaga 10576635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 133 - 422
Target Start/End: Original strand, 21077215 - 21077507
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||| |||||  |||||  || |||||||| ||||||||||||| ||| ||||||||| |||||| |||| || ||||| || | |||||    
T  21077215 tttgcatttgaaggcaaattagaagtcatttagaggagttgtcaatggtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaatttta 21077314  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 330  Q
    ||  |||||||  || ||||||| ||  ||  ||||||||| ||| |||||||||| || |  ||||||||| | ||   | |||||||| | || || |    
T  21077315 tcacaaatcatcaaattccataggtgtttttggtctttttagtgaaaaatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagttatgagg 21077414  T
Q  331 acgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaat 422  Q
    |   ||  ||||| | ||||||||| || | |||||||||||||| |||| | ||||||||||||||||||||| ||| ||||||| ||||||    
T  21077415 attgaatatcaatggttcttagaaggtaatcgaagacaatacaaattgaataaaattcatttcaagttccaaggcattgaaagatggaagaat 21077507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 9288224 - 9288392
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata--gttgttga 262  Q
    ||||||||||||||||||||||||||   ||||||| |||| | | || ||||| ||||| | ||||||| ||||||||| | |||||||   || || |    
T  9288224 gaggagttttcaatggtttgaggaacaaattgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgttttttta 9288323  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||||| |||||||||||||| ||||  ||||||||| ||||   |||||||| |||||| |||||    
T  9288324 gtctttttagtgagaaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaaga 9288392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 302
Target Start/End: Original strand, 21167711 - 21167883
Alignment:
Q  133 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 232  Q
    |||||||||||||||||||   | |||  || |||||||| || ||| ||| |||||| ||||||||| |||| | |||| |  ||||||||||||||||    
T  21167711 tttgcatttgaaggaaaataagacgtcatttagaggagttgtccatgttttaaggaacattttgtattgttttcattcgagttgttgtaatttactttta 21167810  T
Q  233 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatc-gaaaaaacaaga 302  Q
    |||||||  ||| |||| ||||| ||  ||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  21167811 tcctaaaatatgtaacttcataggtgttttgagactttttagtgagaaatcatgtaaatcggaaaaaacaaga 21167883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 399
Target Start/End: Complemental strand, 34864392 - 34864159
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 264  Q
    |||||||| ||||||||||||||||| | |  |||| |||| | |||  ||||||||||| ||||||||||||||| ||| ||||||||   | ||||||    
T  34864392 gaggagttgtcaatggtttgaggaacgtatcatattgttttcactcg--tcattgtaattcacttttatcctaaattatgaaactccatgtgttttgagt 34864295  T
Q  265 ctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttga 362  Q
     |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||| | |||| | |||    || ||||| | ||||||||| | ||||     
T  34864294 gttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggaga-ttgaagtcaatggttcttagaaggtttttgt 34864196  T
Q  363 agacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||| |||||| ||||||||| |||||||    
T  34864195 agacaatacaaaatgaagaaaattcatttaaagttcc 34864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 217 - 399
Target Start/End: Original strand, 15192269 - 15192454
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 313  Q
    |||||||| |||||||||||| ||| |||| |||||||| ||||  |||| |||| || |||||||||||||| ||||| ||| ||||| |||||  |||    
T  15192269 ttgtaattcacttttatcctagatcgtgcagctccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaa 15192368  T
Q  314 ggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||| |||||| |||   ||| |  |||| | ||||||||| |  ||||||||||| ||||||||||| |||||||||||||||||    
T  15192369 ggatcaaggatatgaaattgaaga-ccaatggttcttagaaggttgttgaagacaattcaaagtgaagacaattcatttcaagttcc 15192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 22119578 - 22119779
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttg-aggagttttcaatggt 181  Q
    ||||||| ||| | |||||||||||||  ||| | ||||||||    || |||||||||||||| |||||  |||| |||||  ||||||| ||||||||    
T  22119578 tgatgatagaacatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaattagaagt-tatttataggagttgtcaatggt 22119676  T
Q  182 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaa 279  Q
    |||||||||   ||||| | ||||   |||| ||||||||||||||||||| || ||||||||||||| |||||   | ||||||||||||| |||||||    
T  22119677 ttgaggaacaaattgtaatgttttcgttcgagtcattgtaatttacttttacccaaaatcatgcaactacataggtattttgagtctttttagtgagaaa 22119776  T
Q  280 tca 282  Q
    |||    
T  22119777 tca 22119779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 1676396 - 1676301
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| ||||||||||||||||| | ||||| | |||| | |||| |  |||||||| | |||||||||| ||||||||||||||||||||||    
T  1676396 gaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtt 1676301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 1682924 - 1682829
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| ||||||||||||||||| | ||||| | |||| | |||| |  |||||||| | |||||||||| ||||||||||||||||||||||    
T  1682924 gaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtt 1682829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 318
Target Start/End: Complemental strand, 17339914 - 17339760
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| || |||| ||||||||| ||||||||  |||| | || | || |||||||| | |||||||||||||||||||| | ||||| ||  ||||    
T  17339914 gaggagttatccatggattgaggaacattttgtatctttttcattctagtctttgtaattcaattttatcctaaatcatgcaatttcataggtgttttga 17339815  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 318  Q
      ||||||| ||||| ||| |||| ||||| ||| |||||||||||| ||||||||    
T  17339814 agctttttagtgagagatcgtgta-atcgacaaagcaagatatcacatgaaggatc 17339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 325
Target Start/End: Complemental strand, 25315332 - 25315169
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata--gttgttga 262  Q
    |||||||| |||||| |||||||||| | ||||||| |||| | | || || |||||||| | |||||||||| ||||||||||||||||  | | ||||    
T  25315332 gaggagttgtcaatgctttgaggaacatattgtattgttttcacttgagtcgttgtaattaagttttatcctagatcatgcaactccatatgggttttga 25315233  T
Q  263 gt-ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    ||  ||| || |||| ||||||||| ||||| ||| ||||| ||| || |||||||| ||||||    
T  25315232 gtaatttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggata 25315169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 399
Target Start/End: Original strand, 27302796 - 27303028
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagt-tgttgagtctt 267  Q
    |||| ||||||||||||||||| ||||||||| |||| | |||| ||||||||||| | || ||| ||| ||||||||||| ||| || | || ||| ||    
T  27302796 agttgtcaatggtttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaacttcatggtgtttttagtatt 27302895  T
Q  268 tt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagac 366  Q
    || || |||  ||||||||| ||||| |||  |||| |||||  | | |||| |||||| |||   ||| ||| |  | ||||||||| | |||||||||    
T  27302896 ttgtagtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaaattgaacattaagggttcttagaaggtttttgaagac 27302995  T
Q  367 aatacaaagtgaagataattcatttcaagttcc 399  Q
    | || |||||||||| ||||||||| |||||||    
T  27302996 attataaagtgaagaaaattcattttaagttcc 27303028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 401
Target Start/End: Original strand, 13064465 - 13064679
Alignment:
Q  190 ctttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtag 287  Q
    |||||| |||| |||||| || ||||||  ||| | ||||||||  |||||||||||| |  |||| ||||  ||||| ||||| | ||||||||||||     
T  13064465 ctttttttattgtttttattcaattcataataaatcacttttattataaatcatgcaattttataggtgttttgagtcattttagtaagaaatcatgtaa 13064564  T
Q  288 atcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataatt 386  Q
    || |  ||| ||||| |||||  |||||||| ||||||||| ||   || ||||||| | |||||| | |||||||||||||| ||||||||| | | ||    
T  13064565 attggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaattcaaagtgaacaaattt 13064664  T
Q  387 catttcaagttccaa 401  Q
     ||||||||||||||    
T  13064665 gatttcaagttccaa 13064679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 9783084 - 9782994
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    |||||||| ||||| ||||||||||| | ||||||| |||| | || ||||||||||||| | ||||||  || |||||||||||||||||    
T  9783084 gaggagttgtcaatagtttgaggaacatattgtattgttttcactcaattcattgtaattcagttttattttagatcatgcaactccatag 9782994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 399
Target Start/End: Complemental strand, 17026745 - 17026560
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 313  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||  |||| |||| || | | |||||||||| ||||| |||  |||| |||||| |||    
T  17026745 ttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatgaa 17026646  T
Q  314 ggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||| || ||| ||  |   || || |  | ||||| ||  | |||||||||||||||||||||||| |||| ||||||||||||    
T  17026645 ggatcaagtatatgagaatttaagttaatggttcttaaaaagtttttgaagacaatacaaagtgaagaaaattaatttcaagttcc 17026560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 26159773 - 26159914
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtc 265  Q
    ||||| ||||| |||| || ||| ||||||||| |||| | |||| || |||||||||| |||| |||||||| || ||||| ||||  ||||  |||||    
T  26159773 gagttgtcaatagtttaagaaacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgttttgagtc 26159872  T
Q  266 tttttaatgagaaatcatgtagatcgaaaaaacaagatatca 307  Q
    |||||| ||| ||||||||||||||   ||||||||| ||||    
T  26159873 tttttagtgaaaaatcatgtagatcagcaaaacaagacatca 26159914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 46647214 - 46647354
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgag-tctt 267  Q
    |||| |||||||||| | |||  ||||||||| |||| | || | ||  ||||||| |||||||||||||||||||||||||||||  ||||||| | ||    
T  46647214 agttgtcaatggtttcaagaatattttgtattgttttcattctagtcggtgtaattcacttttatcctaaatcatgcaactccataagtgttgagttatt 46647313  T
Q  268 tttaatgagaaatcatgtagatcgaaaaaacaagatatcac 308  Q
    ||||  |||||||||| || |||   ||||||||| |||||    
T  46647314 tttatcgagaaatcatataaatcagcaaaacaagacatcac 46647354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 403
Target Start/End: Original strand, 33519107 - 33519285
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    ||||||| |||||||||||||| | ||| ||||  ||||||||||| |||||||||||||  ||||  ||| ||| | ||| |  |||| || |||||||    
T  33519107 ttttatcttaaatcatgcaacttcgtaggtgttttgagtctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggata 33519206  T
Q  326 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
     || ||   ||  ||||| | ||||||||| | ||||||||||||||||  |||||| |||||||||||| ||||||||    
T  33519207 tgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagttgaagaaaattcatttcaaattccaagg 33519285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 399
Target Start/End: Complemental strand, 47024755 - 47024629
Alignment:
Q  273 tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatac 371  Q
    |||||||||||||| ||||||||| ||||| ||| || |||||||| |||| | |||||   || | ||||| | |||||||| | |||||| ||| |||    
T  47024755 tgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaagt-caatggttcttagaaggtttttgaaaacagtac 47024657  T
Q  372 aaagtgaagataattcatttcaagttcc 399  Q
    |||||||||| |||| ||||||||||||    
T  47024656 aaagtgaagagaatttatttcaagttcc 47024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 399
Target Start/End: Complemental strand, 1695935 - 1695710
Alignment:
Q  178 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatga 275  Q
    |||||| |||||| | |||||||  ||||| | || || |||||||| | |||||||||| ||||||||||||||||||| ||  |||  ||| || |||    
T  1695935 tggtttcaggaacatattgtattggttttatttgagtctttgtaattcaattttatcctagatcatgcaactccatagttattttgagggtttgtagtga 1695836  T
Q  276 g-aaatcatgtagatcgaaaaaa-caagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaa 373  Q
    | |||||||| | ||| |||||| ||||| ||||   ||| |||| | |||| |||||   ||||  ||   ||||||||| |  |||||||||||||||    
T  1695835 ggaaatcatgaaaatcaaaaaaatcaagacatcatgtgaatgatcaacgatatgaagattgaaataaaacattcttagaaggttgttgaagacaatacaa 1695736  T
Q  374 agtgaagataattcatttcaagttcc 399  Q
    |||||| | |||||||||||||||||    
T  1695735 agtgaataaaattcatttcaagttcc 1695710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 10320291 - 10320225
Alignment:
Q  194 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||||||| | |||| || |||||||| |||||||||||| | ||||||||||||||| ||||    
T  10320291 ttgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgtt 10320225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 1673869 - 1673826
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt 260  Q
    |||||||| | |||||||||| ||||||||||||||||||||||    
T  1673869 ttgtaattcaattttatcctatatcatgcaactccatagttgtt 1673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 12111433 - 12111360
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattcttttt-aatcgattcattgtaatttacttttatccta 237  Q
    |||||||| ||||||||||||||||| | ||||||| ||||| |  ||| || |||||||| ||||||||||||    
T  12111433 gaggagttgtcaatggtttgaggaacatattgtattttttttcacacgagtcgttgtaattcacttttatccta 12111360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 18444277 - 18444354
Alignment:
Q  178 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 255  Q
    |||||||||||||| |||||| | |||| | ||||  |  ||||||| | ||||||||||||||| ||||||||||||    
T  18444277 tggtttgaggaactctttgtaatgttttcattcgagccgctgtaattcagttttatcctaaatcacgcaactccatag 18444354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 18898192 - 18898233
Alignment:
Q  358 tttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||||| |||||||||||| |||| |||||||||||||||||    
T  18898192 tttgaatacaatacaaagtaaagaaaattcatttcaagttcc 18898233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 51884800 - 51884853
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||| ||||||||||||||||| |||| ||||||||||||    
T  51884800 tcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttcc 51884853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 5906679 - 5906631
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaa 394  Q
    ||||||||| | |||||||| |||||||||| |||| ||||||||||||    
T  5906679 tcttagaaggtttttgaagataatacaaagttaagaaaattcatttcaa 5906631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 20044219 - 20044315
Alignment:
Q  192 ttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtctttttaatgagaaatcatgta 286  Q
    |||| |||| |||| | |||| ||||||||||| | |||  |||| ||||||||||||||||| || | ||||||||||||| ||| ||||||||||    
T  20044219 ttttatattgttttcattcgagtcattgtaattcaatttcttccttaatcatgcaactccatatgtattttgagtctttttattgaaaaatcatgta 20044315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 12033 - 12156
Alignment:
Q  82 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 181  Q
    ||||| ||||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| ||    
T  12033 ttgataatggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagt 12132  T
Q  182 ttgaggaactttttgtattctttt 205  Q
    ||||||||||||||||||| ||||    
T  12133 ttgaggaactttttgtattgtttt 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 235 - 438
Target Start/End: Original strand, 12328 - 12534
Alignment:
Q  235 ctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 331  Q
    ||||||||||||||||||||| ||||  |||| |||| || |||||||||||||| ||||| ||| ||||| |||||  ||||||| || |||| |||||    
T  12328 ctaaatcatgcaactccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaaga 12427  T
Q  332 -cgaaaattcaatgatc-ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaa 429  Q
     |||| |  ||||| |  ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||| ||||| |||||||    
T  12428 tcgaaga--caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatggaagaagggccgaa 12525  T
Q  430 aaagggtcg 438  Q
    |||||||||    
T  12526 aaagggtcg 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 83 - 396
Target Start/End: Complemental strand, 11880 - 11564
Alignment:
Q  83 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 182  Q
    ||||||| ||| | |||||||||||||  ||| | ||||||||    ||||||||||||||||| ||| |  |||||  || |||||||| |||||| ||    
T  11880 tgatgattgaacatcatatgatattttaggctatgtttttagttattttatttgcatttgaaggcaaaatagaagtcatttagaggagttgtcaatgatt 11781  T
Q  183 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaat 280  Q
    ||| |||||||||||||  |||| | | || || |||||||| | |||| ||||||||||||||||| ||| | ||  |||||||||||   |  |||||    
T  11780 tgatgaactttttgtatagttttcatttgaatcgttgtaattcagttttgtcctaaatcatgcaactacatgggtgttttgagtcttttccgtacgaaat 11681  T
Q  281 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaaagtgaa 379  Q
    |||||| ||||| ||||||||| ||||    |||||| ||| ||  |||||   ||  ||||||| ||||| ||| ||||||||||||||||||||||||    
T  11680 catgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagtgaa 11581  T
Q  380 gataattcatttcaagt 396  Q
    || ||||||||||||||    
T  11580 gaaaattcatttcaagt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 1604 - 1720
Alignment:
Q  89 tggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagga 188  Q
    |||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| |||||||||    
T  1604 tggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagtttgagga 1703  T
Q  189 actttttgtattctttt 205  Q
    |||||||||||| ||||    
T  1704 actttttgtattgtttt 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 2008 - 2098
Alignment:
Q  348 ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcg 438  Q
    ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||| ||||| ||||||||||||||||    
T  2008 ttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatggaagaagggccgaaaaagggtcg 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 24507761 - 24507645
Alignment:
Q  89 tggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagga 188  Q
    |||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| |||||||||    
T  24507761 tggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagtttgagga 24507662  T
Q  189 actttttgtattctttt 205  Q
    |||||||||||| ||||    
T  24507661 actttttgtattgtttt 24507645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 399
Target Start/End: Complemental strand, 17860540 - 17860312
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-t 270  Q
    ||||||||||||||||| ||||||||| |||| | |||| ||||||| ||||||||||||| |||||||||||||||||||  ||  |||||| |||| |    
T  17860540 tcaatggtttgaggaacattttgtattattttcactcgagtcattgtcatttacttttatcttaaatcatgcaactccatacgtgctttgagtgttttgt 17860441  T
Q  271 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaat 369  Q
    | ||||||||||||||  || | ||| || || |||||  |||||||  || ||||||| |   ||   |||| | ||||||||| | |||| |||||||    
T  17860440 agtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgtagacaat 17860342  T
Q  370 acaaagtgaagataattcatttcaagttcc 399  Q
    |||||||||||| |||||||||||||||||    
T  17860341 acaaagtgaagaaaattcatttcaagttcc 17860312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 228 - 403
Target Start/End: Complemental strand, 26499884 - 26499706
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 325  Q
    ||||||||||||||||| || | ||||| ||||  |||| |||||| |||||||||||| | ||||  ||||||||||| |||  ||| |||||||||||    
T  26499884 ttttatcctaaatcatgtaatttcataggtgttatgagtgtttttagtgagaaatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggata 26499785  T
Q  326 agaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
     |||||   ||  |||||| | |||||||| | ||||||||||||||||||| |||| ||||||||||||||| |||||    
T  26499784 tgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtaaagaaaattcatttcaagtttcaagg 26499706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 9943198 - 9943111
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaaga 302  Q
    |||||||| |||||||||||||||||||||||||||||| ||  || ||| |||||| |||||||||||||| |||| ||||||||||    
T  9943198 ttgtaattcacttttatcctaaatcatgcaactccataggtgtttttagtatttttattgagaaatcatgtaaatcggaaaaacaaga 9943111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 26512878 - 26512755
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||| | ||| ||||||||| |||| | ||||||| |||||||| ||||||| |||| |||||||||| | |||| ||  ||||    
T  26512878 gaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttga 26512779  T
Q  263 gtctttttaatgagaaatcatgta 286  Q
    |||||  || ||||||||||||||    
T  26512778 gtcttcctagtgagaaatcatgta 26512755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 26517994 - 26517871
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||||||||||| | ||| ||||||||| |||| | ||||||| |||||||| ||||||| |||| |||||||||| | |||| ||  ||||    
T  26517994 gaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttga 26517895  T
Q  263 gtctttttaatgagaaatcatgta 286  Q
    |||||  || ||||||||||||||    
T  26517894 gtcttcctagtgagaaatcatgta 26517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 24507357 - 24507267
Alignment:
Q  348 ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcg 438  Q
    ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||  ||||| ||||||||||||||||    
T  24507357 ttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatagaagaagggccgaaaaagggtcg 24507267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 15575122 - 15575175
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  15575122 tcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 15575175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 373
Target Start/End: Complemental strand, 9396642 - 9396496
Alignment:
Q  229 tttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataa 326  Q
    ||||| ||||||||||||||| ||||  ||||  ||||||||||| ||||||||||| || ||||  ||||||||| |||||  |||||||| |||| ||    
T  9396642 tttattctaaatcatgcaacttcatatgtgttttgagtctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaaggatcaaggacaa 9396544  T
Q  327 gaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaa 373  Q
    |||||   ||  |||| || |||||||| || ||||||||||||||||    
T  9396543 gaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 16439482 - 16439616
Alignment:
Q  174 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 271  Q
    ||||| |||||||| ||  |||||||| |||||| | || || || ||||| ||||||||||||||| |||||||| || |  ||  |||||||||||||    
T  16439482 tcaatagtttgagggacaatttgtattgtttttatt-gagtcgttataattaacttttatcctaaataatgcaacttcacatgtgttttgagtcttttta 16439580  T
Q  272 atgagaaatcatgtagatcgaaaaaacaagatatca 307  Q
     |||||||||||||| |||  |||||||||| ||||    
T  16439581 gtgagaaatcatgtaaatcagaaaaacaagacatca 16439616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 14768369 - 14768223
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 262  Q
    |||||||| ||| |||||||||||| ||||||||||  ||| | |||| | ||||||||| || ||||| ||||| ||||||| | ||||  ||  ||||    
T  14768369 gaggagttgtcattggtttgaggaattttttgtattggtttcattcgagttattgtaattcacatttattctaaaacatgcaatttcataaatgttttga 14768270  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcaca 309  Q
    ||||||| |   |||||||||||| ||||  ||||||||| ||||||    
T  14768269 gtcttttcagatagaaatcatgtaaatcggcaaaacaagacatcaca 14768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 398
Target Start/End: Original strand, 30355456 - 30355567
Alignment:
Q  288 atcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataatt 386  Q
    ||||| ||| |||||  ||||| ||||||||||||||| |||||   ||  ||||| | ||||||||| | ||||||||||||| |||||||| | ||||    
T  30355456 atcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtgaataaaatt 30355555  T
Q  387 catttcaagttc 398  Q
    ||||||||||||    
T  30355556 catttcaagttc 30355567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 324
Target Start/End: Complemental strand, 32930573 - 32930412
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| ||||||||||| ||||| |||||| || |||  |   || || || ||||| ||||||||||| || ||||||| |  |||| ||||  ||    
T  32930573 gaggagttgtcaatggtttgcggaacattttgttttgtttccataagagtcgttttaattcacttttatccttaaacatgcaatttgatagatgttttga 32930474  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 324  Q
    ||||||||| |||||||||||||| || |  ||||||||| |||||| | |||||| |||||    
T  32930473 gtctttttagtgagaaatcatgtaaattggcaaaacaagacatcacatggaggatcaaggat 32930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 13759552 - 13759467
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactc 250  Q
    |||||||| ||||||||||||||||| | ||| ||| |||| | |||| || |||||||| | |||||| ||| ||||||||||||    
T  13759552 gaggagttgtcaatggtttgaggaacatattgaattgttttcactcgaatcgttgtaattcaattttattctatatcatgcaactc 13759467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 12972433 - 12972317
Alignment:
Q  217 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 314  Q
    |||||||| | || ||||||||||||||||||| ||||  ||  |||||||||||||  ||||||||||||| |||  |||| ||||| || ||  |||     
T  12972433 ttgtaattcagttgtatcctaaatcatgcaacttcatacgtgttttgagtctttttagggagaaatcatgtaaatcagaaaaccaagacataacgtgaaa 12972334  T
Q  315 gatcgaggataagaaga 331  Q
    |||||| |||| |||||    
T  12972333 gatcgatgatatgaaga 12972317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 15998708 - 15998761
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||| ||||||||||||||||||  |||||||||||||||||    
T  15998708 tcttagaaggttgttgtagacaatacaaagtgaagcaaattcatttcaagttcc 15998761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20495890 - 20495806
Alignment:
Q  169 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    |||| ||||||||||||||||| ||||| ||| |||||| | || || |||||||| | ||||||| ||||| |||||||| ||||    
T  20495890 agttatcaatggtttgaggaacattttg-attgtttttatttgagtcgttgtaattcaattttatcttaaattatgcaacttcata 20495806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 445
Target Start/End: Complemental strand, 14768189 - 14768093
Alignment:
Q  349 tagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcgtaagctg 445  Q
    |||||| ||||||||||||||| |||| ||||| |||  |||| ||||| ||||| || | | |||| ||||| || ||||||||||| | ||||||    
T  14768189 tagaaggtatttgaagacaatagaaagcgaagaaaatagattttaagttacaaggcatcacaggatggaagaacggacgaaaaagggtggaaagctg 14768093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 22559250 - 22559176
Alignment:
Q  228 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaag 301  Q
    |||| ||| ||||||||||||| ||||| ||||  | ||||||| | |||||||||||||| ||||||||||||||    
T  22559250 ttttttcccaaatcatgcaacttcataggtgttttgggtctttt-agtgagaaatcatgtaaatcgaaaaaacaag 22559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 165 - 322
Target Start/End: Original strand, 1457 - 1616
Alignment:
Q  165 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 262  Q
    |||||||| |||||  |||||||| | ||||||||| |||| | |||||||||| ||||| ||||||||| | ||||||||||||| | || ||||  ||    
T  1457 gaggagttgtcaatattttgaggagcattttgtattgttttcattcgattcattttaattcacttttatcattaatcatgcaactcaaaagatgtttcga 1556  T
Q  263 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagg 322  Q
    |||||||| |||| |||||||||| |||| ||||||| || |||||| ||| ||||||||    
T  1557 gtcttttttatgaaaaatcatgtaaatcggaaaaacatgaaatcacatgaaagatcgagg 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 2709 - 2754
Alignment:
Q  357 atttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    |||||||||||||||| |||||||| || |||||||| ||||||||    
T  2709 atttgaagacaatacagagtgaagaaaactcatttcatgttccaag 2754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 179 - 397
Target Start/End: Original strand, 21425 - 21647
Alignment:
Q  179 ggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatga 275  Q
    |||||||||||||| ||||||| |||| | |||| || |||||||| |||||||||||||||||||||||| |||| |||  ||| || ||||  | |||    
T  21425 ggtttgaggaacttattgtattgttttcactcgagtcgttgtaattcacttttatcctaaatcatgcaacttcataattgttttgggtgttttgcagtga 21524  T
Q  276 gaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaa 374  Q
    | ||||||||| ||||| ||| ||||| || ||| |||||||| | |||| |||||   ||  ||||| | ||||||||| | ||| |||||||||||||    
T  21525 ggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaagacaatacaaa 21624  T
Q  375 gtgaagataattcatttcaagtt 397  Q
    || ||||  ||||||||||||||    
T  21625 gttaagaatattcatttcaagtt 21647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 6213 - 6282
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatccta 237  Q
    ||||||||||||||||||||||| |  |||||| |||| | || | ||||||||||||||||||||||||    
T  6213 gagttttcaatggtttgaggaacataatgtattattttcactcaagtcattgtaatttacttttatccta 6282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 94 - 437
Target Start/End: Original strand, 58688 - 59038
Alignment:
Q  94 taacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaacttt 193  Q
    ||||||||||| ||||||||| | ||||| ||    || | |||||||||||| |||||  ||||| ||  |||||||| ||||||||||||||||||||    
T  58688 taacatatgatgtttttagctatgtttttggttattttctatgcatttgaaggcaaattagaagtcaatcagaggagttgtcaatggtttgaggaacttt 58787  T
Q  194 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gttgttga-gtctttttaatgagaaatcatgtagatcg 291  Q
    ||||||| |||| | |||  ||||||||||  |  |||||||| |||||||||||||  || ||| || | ||||||||| |||||||||||||| || |    
T  58788 ttgtattgttttcattcgggtcattgtaatccaggtttatcctgaatcatgcaactctttatgtttttcaagtctttttagtgagaaatcatgtaaattg 58887  T
Q  292 aa-aaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-----gatcttagaagttatttgaagacaatacaaagtgaagataat 385  Q
       |||||| || |||||| ||||||||||| ||| |||||   || || |||     | ||||| ||  |||||||||||||| |||| |||||| |||    
T  58888 ggtaaaacaggacatcacatgaaggatcgagaatatgaagattgaagtttaatatatggttcttaaaatatatttgaagacaatgcaaaatgaaga-aat 58986  T
Q  386 tcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtc 437  Q
    |||||| ||||||||||| || | |||| ||||||| |   |||||||||||    
T  58987 tcatttaaagttccaaggtatcacaagacgaaagaacgcttgaaaaagggtc 59038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 155 - 402
Target Start/End: Complemental strand, 228295 - 228047
Alignment:
Q  155 aagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 254  Q
    ||||| ||| |||||||||||| || |||| ||||| ||||  ||| |||| | |||| || |||||||| | ||||||| ||||||||||||| | | |    
T  228295 aagtcaattagaggagttttcattgatttgtggaacattttaaattgttttcattcgagtcgttgtaattcatttttatcataaatcatgcaaccctaaa 228196  T
Q  255 gttgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgat-cttag 351  Q
      |||||  | |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||||||  || ||| |  ||| |  ||||| | |||||    
T  228195 agtgttgtatgttttatagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga--caatggttcttag 228098  T
Q  352 aagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 402  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  228097 aaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaag 228047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 398
Target Start/End: Complemental strand, 27007 - 26819
Alignment:
Q  214 tcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacac 310  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||||  |||| |||  || |||||||||||||| ||||| |||  |||| |||||      
T  27007 tcattgtaatttacttttatcctaaatcatacaactacataggtgttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcacgt 26908  T
Q  311 gaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttc 398  Q
    ||| |||| |||||| ||| |   || |||||| | ||||||||  |  ||||||||||||||||||||||| ||||| ||||||||||    
T  26907 gaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaagtgaagaaaattcgtttcaagttc 26819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 1997 - 2040
Alignment:
Q  358 tttgaagacaatacaaagtgaagataattcatttcaagttccaa 401  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  1997 tttgaagacaatacaaagtaaagaaaattcatttcaagttccaa 2040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 1723 - 1839
Alignment:
Q  88 atggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagg 187  Q
    ||||||||||||||||| ||||   || | |||||||  ||||| |||||||||||||||| |||  ||||| |||  |||| || ||| |||||||| |    
T  1723 atggaataacatatgatgttttgc-ctatgtttttagcctaattctttgcatttgaaggaatattagaagtcaattataggatttgtcattggtttgaag 1821  T
Q  188 aactttttgtattctttt 205  Q
    ||| ||||||||| ||||    
T  1822 aaccttttgtattgtttt 1839  T

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Target: scaffold1026 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 1931 - 1850
Alignment:
Q  168 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 249  Q
    ||||| |||||| ||| ||||| |||||||||| |||| | || | |||||||||| || ||||||||||||| ||||||||    
T  1931 gagttgtcaatgatttaaggaaatttttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaact 1850  T

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Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 13116 - 13016
Alignment:
Q  221 aatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggat 317  Q
    |||| ||||||||||||||| ||||||||||| || ||  |||||| |||| || |||| ||||||||| ||||| ||| ||||| |||||| |||||||    
T  13116 aattcacttttatcctaaattatgcaactccacaggtgttttgagtgttttgtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggat 13017  T
Q  318 c 318  Q
    |    
T  13016 c 13016  T

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Target: scaffold0836 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 2803 - 2863
Alignment:
Q  343 tgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 403  Q
    |||||||||||   |||||| |||||||||||||||||| ||||||||| ||| |||||||    
T  2803 tgatcttagaatacatttgatgacaatacaaagtgaagaaaattcatttaaagatccaagg 2863  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 22527 - 22477
Alignment:
Q  349 tagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    |||||| | ||| |||||||||||| ||||||| |||||||||||||||||    
T  22527 tagaaggttttttaagacaatacaaggtgaagaaaattcatttcaagttcc 22477  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 7817 - 7870
Alignment:
Q  346 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 399  Q
    ||||||||| |  ||||||||| |||||||| |||| |||||||||||||||||    
T  7817 tcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcc 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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