View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9182_low_6 (Length: 506)
Name: NF9182_low_6
Description: NF9182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9182_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 1 - 491
Target Start/End: Original strand, 1796314 - 1796804
Alignment:
| Q |
1 |
attatatgataaagtcagtgaataaggttggcatcttataaatagttatttgtatttgcccattttgttttatttgtaatgaaatgcaatagctaccttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1796314 |
attatatgataaagtcagtgaataaggttggcatcttataaatagttatttgtatttgcccattttgttttatttgtaatgaaatgcaatagctaccttt |
1796413 |
T |
|
| Q |
101 |
cactaaaaatattgctatattttatatacttttgtattgttattaaatttgttaaatgtaacttttctctttcatgagtgagtcatgtttgagatatagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1796414 |
cactaaaaatattgctatattttatatacttttgtattgttattaaatttgttaaatgtaacttttctctttcatgagtgagtcatgtttgagatatagt |
1796513 |
T |
|
| Q |
201 |
ttcgtagaacataaaattctgcagaataaaaaatcggttaaaaggtttgcatctatcccaatcactttcattttttggtaaataaagtttgattatttaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
1796514 |
ttcgtagaacataaaattctgcagaataaaaaatcggttaaaaggtttgcatctatcccaatcacttttattttttggtaaataaagtttgattatttaa |
1796613 |
T |
|
| Q |
301 |
tatttatctgatgaaagcttttttgaatacccaacacagatttgaaaattttaaatataatatccgatccataaagtaaaaatgttataatcaaattcct |
400 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
1796614 |
tatttatctgatgaaagcttttttgtatacccaacacagatttgaaaattttaaatataatatccgatccataaaataaaaatgttataatcaaattcct |
1796713 |
T |
|
| Q |
401 |
aatctaatatatttttgagttgtaacaccagttaatatccagcgtataagcccgttattacattgattttacaaaccctaatgtaaaaagt |
491 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1796714 |
aatctaatatatttttgagttgtaacaccagttaatatccagcgtataagcccgttattacattgattttacaaaccctaatgtaaaaagt |
1796804 |
T |
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