View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9184_low_5 (Length: 433)

Name: NF9184_low_5
Description: NF9184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9184_low_5
NF9184_low_5
[»] scaffold0428 (2 HSPs)
scaffold0428 (12-433)||(12884-13305)
scaffold0428 (162-301)||(5755-5894)
[»] chr6 (17 HSPs)
chr6 (12-433)||(33280947-33281368)
chr6 (173-433)||(33396806-33397066)
chr6 (173-433)||(33407756-33408016)
chr6 (137-291)||(28870677-28870829)
chr6 (156-299)||(33387531-33387674)
chr6 (162-297)||(33261982-33262117)
chr6 (356-433)||(33301918-33301995)
chr6 (174-291)||(33409361-33409478)
chr6 (176-299)||(33271219-33271342)
chr6 (162-292)||(33303861-33303991)
chr6 (174-291)||(33398449-33398566)
chr6 (175-299)||(33284987-33285111)
chr6 (218-299)||(33645046-33645127)
chr6 (385-433)||(31564348-31564399)
chr6 (172-259)||(33358306-33358393)
chr6 (230-263)||(9166194-9166227)
chr6 (162-210)||(31563390-31563438)
[»] chr2 (2 HSPs)
chr2 (162-299)||(17441395-17441532)
chr2 (173-263)||(17446958-17447048)
[»] scaffold1408 (1 HSPs)
scaffold1408 (162-301)||(9-148)


Alignment Details
Target: scaffold0428 (Bit Score: 410; Significance: 0; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 12 - 433
Target Start/End: Complemental strand, 13305 - 12884
Alignment:
Q  12 cagagatgcaaatcatgtcaatgctcatctgcttgcagtttgaattcaaaacatctcttgtccattttgtcgagactcttcatgaacttgtgatccatat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13305 cagagatgcaaatcatgtcaatgctcatctgcttgcagtttgaattcaaaacatctcttgtccattttgtcgagactcttcatgaacttgtgatccatat 13206  T
Q  112 cttgtttcttctctcggaagtagttatgaatgattttgattgacgttgcagttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaa 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13205 cttgtttcttctctctgaagtagttatgaatgattttgattgacgttgcggttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaa 13106  T
Q  212 gcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctccgtacccacatccctaataa 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13105 gcttcatgattcattattgttaaactgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctccgtacccacatccctaataa 13006  T
Q  312 tttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttcactcgagccttctgtttgtccattagaattagatatgctg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13005 tttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttcactcgagccttctgtttgtccattagaattagatatgctg 12906  T
Q  412 tttgtctcggatgcaattgcaa 433  Q
    ||||||||||||||||||||||    
T  12905 tttgtctcggatgcaattgcaa 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 5755 - 5894
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttaca 261  Q
    |||||||| ||||||||||| |||||||||| || |||  |||||||||   |||||||||||| ||||||||| |||||||||||| || |||||||||    
T  5755 gttgtgtctcatcttcaattgccaaaatcttacatttcgaagccaaggatttttcatgattcatcattgttaagttgaactcttgtaagttttgtttaca 5854  T
Q  262 tattcaacgatgcacgcaactcttcacctccgtacccaca 301  Q
    ||  ||||||| | |||||| |||||| ||| ||||||||    
T  5855 tacccaacgatacccgcaacacttcacatccatacccaca 5894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 410; Significance: 0; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 12 - 433
Target Start/End: Original strand, 33280947 - 33281368
Alignment:
Q  12 cagagatgcaaatcatgtcaatgctcatctgcttgcagtttgaattcaaaacatctcttgtccattttgtcgagactcttcatgaacttgtgatccatat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33280947 cagagatgcaaatcatgtcaatgctcatctgcttgcagtttgaattcaaaacatctcttgtccattttgtcgagactcttcatgaacttgtgatccatat 33281046  T
Q  112 cttgtttcttctctcggaagtagttatgaatgattttgattgacgttgcagttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaa 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33281047 cttgtttcttctctctgaagtagttatgaatgattttgattgacgttgcggttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaa 33281146  T
Q  212 gcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctccgtacccacatccctaataa 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33281147 gcttcatgattcattattgttaaactgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctccgtacccacatccctaataa 33281246  T
Q  312 tttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttcactcgagccttctgtttgtccattagaattagatatgctg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33281247 tttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttcactcgagccttctgtttgtccattagaattagatatgctg 33281346  T
Q  412 tttgtctcggatgcaattgcaa 433  Q
    ||||||||||||||||||||||    
T  33281347 tttgtctcggatgcaattgcaa 33281368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 173 - 433
Target Start/End: Original strand, 33396806 - 33397066
Alignment:
Q  173 tcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgat 272  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||| |||||| ||||||||||||||||||||  |||| ||    
T  33396806 tcttcaatttccaaaatcttgcacttctgaaccaaggaattttcatgattcatcattgttaagttgaacttttgtaggtcttgtttacatacccaactat 33396905  T
Q  273 gcacgcaactcttcacctccgtacccacatccctaataatttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttca 372  Q
     |  ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33396906 acctgcagctcttcacctccatacccacatccttaataatttcaacacaggtagggacaaaaacaagatgatcatcgggcgactgaaattgaaaccttca 33397005  T
Q  373 ctcgagccttctgtttgtccattagaattagatatgctgtttgtctcggatgcaattgcaa 433  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  33397006 ctcgagccttctgtttgtccattagaattagatatccggtttgtctcggatgcaattgcaa 33397066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 173 - 433
Target Start/End: Original strand, 33407756 - 33408016
Alignment:
Q  173 tcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgat 272  Q
    |||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||| |||||| ||||||||||||||||||||  |||| ||    
T  33407756 tcttcaatttccaaaatcttgcacttctgagccaaggaattttcgtgattcatcattgttaagttgaacttttgtaggtcttgtttacatacccaactat 33407855  T
Q  273 gcacgcaactcttcacctccgtacccacatccctaataatttcaacacaggtagggacaaaatcaagatgatcatcgggcgactgaaattgaaaccttca 372  Q
     | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |    
T  33407856 acccgcagctcttcaccttcgtacccacatccctaataatttcaacacaggtagggacaaaaacaagatgatcatcgggcgactgaaattaaaaccttta 33407955  T
Q  373 ctcgagccttctgtttgtccattagaattagatatgctgtttgtctcggatgcaattgcaa 433  Q
    |||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||||    
T  33407956 ctcgagccttctgtttcttcagtagaattagatatgctgtttgtctcagatgcaattgcaa 33408016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 28870829 - 28870677
Alignment:
Q  137 atgaatgattttgattgacgttgcagttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagc 236  Q
    |||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||  || ||||| |||||||||     
T  28870829 atgagtgattttg-ttgaggttgcggttgtgtcccatcttcaatttccaaaatcttgaacttctgagccaaggaatttttgtg-ttcatcattgttaagt 28870732  T
Q  237 tgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctc 291  Q
    |||||||||||||||||||||||||||  ||||||| | ||||||||||||||||    
T  28870731 tgaactcttgtaggtcttgtttacatacccaacgatacccgcaactcttcacctc 28870677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 156 - 299
Target Start/End: Original strand, 33387531 - 33387674
Alignment:
Q  156 gttgcagttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttg 255  Q
    |||| ||||||||||||||||||||| |||||||||| |||||| |||||||||||  ||| ||||| || |||| |||| |||| ||||||||||||||    
T  33387531 gttgtagttgtgtcccatcttcaattgccaaaatcttacacttcggagccaaggaattttcgtgatttatcattggtaagttgaattcttgtaggtcttg 33387630  T
Q  256 tttacatattcaacgatgcacgcaactcttcacctccgtaccca 299  Q
    ||||||||  ||||||| | ||||||||||||||||| ||||||    
T  33387631 tttacatacccaacgatacccgcaactcttcacctccataccca 33387674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 297
Target Start/End: Original strand, 33261982 - 33262117
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttaca 261  Q
    |||||||| ||||||||||| |||||||||| || |||  |||||||||   |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  33261982 gttgtgtctcatcttcaattgccaaaatcttacatttcgaagccaaggatttttcatgattcatcattgttaagttgaactcttgtaggtcttgtttaca 33262081  T
Q  262 tattcaacgatgcacgcaactcttcacctccgtacc 297  Q
    ||  ||| ||| | ||||||||||||||||| ||||    
T  33262082 tacccaatgatacccgcaactcttcacctccatacc 33262117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 33301918 - 33301995
Alignment:
Q  356 tgaaattgaaaccttcactcgagccttctgtttgtccattagaattagatatgctgtttgtctcggatgcaattgcaa 433  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33301918 tgaaattgaaacctttacttgagccttctgtttgtccattagaattagatatgatgtttgtctcggatgcaatagcaa 33301995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 33409361 - 33409478
Alignment:
Q  174 cttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatg 273  Q
    |||||||| ||| |||||| ||||||||||||||||||  |||||||||||| ||||| ||| |||||| ||||||||||||||||||||  |||||||     
T  33409361 cttcaattgccataatcttacacttctgagccaaggaattttcatgattcatcattgtgaagttgaacttttgtaggtcttgtttacatacccaacgata 33409460  T
Q  274 cacgcaactcttcacctc 291  Q
    | ||||||| ||||||||    
T  33409461 cccgcaacttttcacctc 33409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 299
Target Start/End: Original strand, 33271219 - 33271342
Alignment:
Q  176 tcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatgca 275  Q
    |||||| |||||||||| || ||  |||||||||||  ||| |||||||  |||||||   |||||||||||||||||||||||||||| ||||||| |     
T  33271219 tcaattgccaaaatcttacattttggagccaaggaattttcgtgattcagcattgttatattgaactcttgtaggtcttgtttacatatccaacgatacc 33271318  T
Q  276 cgcaactcttcacctccgtaccca 299  Q
    ||||||||||||||||| ||||||    
T  33271319 cgcaactcttcacctccataccca 33271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 33303861 - 33303991
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttaca 261  Q
    |||||||| ||||||||||| ||||| |||||||||||  ||||||| ||  ||| |||||||| ||||||||| |||| ||||| ||||||| ||||||    
T  33303861 gttgtgtctcatcttcaattgccaaattcttgcacttcccagccaagaaattttcttgattcatcattgttaagttgaattcttgcaggtcttctttaca 33303960  T
Q  262 tattcaacgatgcacgcaactcttcacctcc 292  Q
    ||  || |||| | |||||||||||||||||    
T  33303961 tacccaccgatacccgcaactcttcacctcc 33303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 33398449 - 33398566
Alignment:
Q  174 cttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatg 273  Q
    |||||||| ||| |||||| ||||| ||||| ||||||  |||||||||||| ||||| ||| | |||| | ||||||||||||||||||  |||||||     
T  33398449 cttcaattgccataatcttacacttttgagcaaaggaattttcatgattcatcattgtgaagttcaactttcgtaggtcttgtttacatacccaacgata 33398548  T
Q  274 cacgcaactcttcacctc 291  Q
    | ||||||||||||||||    
T  33398549 cccgcaactcttcacctc 33398566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 33284987 - 33285111
Alignment:
Q  175 ttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatgc 274  Q
    ||||||| ||| |||||| |||||| ||||||||||   ||  |||||||| ||||||||  |||||||||||||||||||||||||||  |||||||      
T  33284987 ttcaattgccataatcttacacttcggagccaaggatattttgtgattcatcattgttaaattgaactcttgtaggtcttgtttacatacccaacgatat 33285086  T
Q  275 acgcaactcttcacctccgtaccca 299  Q
     | ||||| ||||||||| ||||||    
T  33285087 ccacaactgttcacctccataccca 33285111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 33645127 - 33645046
Alignment:
Q  218 tgattcattattgttaagctgaactcttgtaggtcttgtttacatattcaacgatgcacgcaactcttcacctccgtaccca 299  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||  ||||||| | | ||||||||||||| | ||||||    
T  33645127 tgattcatcattgttaagttgaactattgtaggtcttgtttacatacccaacgatacccacaactcttcaccttcataccca 33645046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 31564399 - 31564348
Alignment:
Q  385 gtttgtccattagaattagata---tgctgtttgtctcggatgcaattgcaa 433  Q
    ||||||||||||||||||||||   || ||||||||||||||||||||||||    
T  31564399 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaa 31564348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 33358306 - 33358393
Alignment:
Q  172 atcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgttta 259  Q
    |||||||||| ||||||||||||| |||  ||  |||  |  ||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  33358306 atcttcaattgccaaaatcttgcatttcccagttaagagattttcgtgattcatcattgtgaagttgaactcttgtaggtcttgttta 33358393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 9166194 - 9166227
Alignment:
Q  230 gttaagctgaactcttgtaggtcttgtttacata 263  Q
    |||||| |||||||||||||||||||||||||||    
T  9166194 gttaagttgaactcttgtaggtcttgtttacata 9166227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 31563438 - 31563390
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaagga 210  Q
    |||||||| ||||||||||| ||||| |||| |||||| ||||||||||    
T  31563438 gttgtgtctcatcttcaattgccaaattctttcacttccgagccaagga 31563390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 17441532 - 17441395
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttaca 261  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||    ||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  17441532 gttgtgtctcatcttcaattgccaaaatcttgcacttctgagccaaggttttttcgtgattcatcattgttaagttgaactcttgtaggtcttgtttaca 17441433  T
Q  262 tattcaacgatgcacgcaactcttcacctccgtaccca 299  Q
    ||  ||||||| | ||||||||||||||||| ||||||    
T  17441432 tacccaacgatacccgcaactcttcacctccataccca 17441395  T

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Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 17447048 - 17446958
Alignment:
Q  173 tcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttacata 263  Q
    ||||||||||| |||||||||||||||||||||||||||  ||| | |||||  ||||||||| |||||||||||||||||||||||||||    
T  17447048 tcttcaatttcaaaaatcttgcacttctgagccaaggaattttcgttattcaacattgttaagttgaactcttgtaggtcttgtttacata 17446958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1408 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1408
Description:

Target: scaffold1408; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 9 - 148
Alignment:
Q  162 gttgtgtcccatcttcaatttccaaaatcttgcacttctgagccaaggaagcttcatgattcattattgttaagctgaactcttgtaggtcttgtttaca 261  Q
    |||||||| ||||||||||| |||||||||| || |||  |||||||||   |||||||||||| ||||||||| |||||||||||| || |||||||||    
T  9 gttgtgtctcatcttcaattgccaaaatcttacatttcgaagccaaggatttttcatgattcatcattgttaagttgaactcttgtaagttttgtttaca 108  T
Q  262 tattcaacgatgcacgcaactcttcacctccgtacccaca 301  Q
    ||  ||||||| | |||||| |||||| ||| ||||||||    
T  109 tacccaacgatacccgcaacacttcacatccatacccaca 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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