View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9185_low_5 (Length: 316)
Name: NF9185_low_5
Description: NF9185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9185_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 42021363 - 42021066
Alignment:
| Q |
1 |
tgaaaccattgagaattttgcatcatggtttttcttatcttccaagttcttcaacgaatcttcttctttgtctccgaggaataaacccaattcagagttc |
100 |
Q |
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| T |
42021363 |
tgaaaccattgagaattttgcatcatggtttttcttatcttccaagttctccaacgaatcttcttctttgtctccgaggaataaacccaattcagagttc |
42021264 |
T |
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| Q |
101 |
accaaaaccatgacgtaaaatccattaaccggttcaggtccttcatcatacttagcatcagaaagatcccataaaactttgacttcaaaattttgatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42021263 |
accaaaaccatgacgtaaaatccattaaccggttcaggtccttcatcatacttagcatcagaaagatcccataaaactttgacttcaaaattttgatatt |
42021164 |
T |
|
| Q |
201 |
gaaacgtatcagtacctttgttctgtttcaataacagaggaggatttccattgaattttgagaaaacattgacataatcagaatcagaagtgatgttt |
298 |
Q |
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|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42021163 |
gaaacgtatcagtacctttgttctgtttcaataatagacgaggatttccattgaattttgagaaaacattgacataatcagaatcagaagtgatgttt |
42021066 |
T |
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