View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9186_low_18 (Length: 429)
Name: NF9186_low_18
Description: NF9186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9186_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 19 - 420
Target Start/End: Complemental strand, 47117162 - 47116765
Alignment:
| Q |
19 |
tgtggaacctgcacgagcatgtcggttcaatggcgacatcatcaccggcgaagatggtgatgttggcgttcccgttgagctttgttgcctatcatacatt |
118 |
Q |
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| T |
47117162 |
tgtggaacctgcacgagcatgtcgattcaatggcgacatcatcaccggtgaagacggtgatgttggcgttcccgttgagctttgttgcctatcatacatt |
47117063 |
T |
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| Q |
119 |
ctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaaggtgatcgatcgagtcattgatacgttgatattgcttaccttgctttgtgat |
218 |
Q |
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| T |
47117062 |
ctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaaggtgatcga----gtcattgatacgttgatattgcttaccttgctttgtgat |
47116967 |
T |
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| Q |
219 |
ttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgta |
318 |
Q |
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| T |
47116966 |
ttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgta |
47116867 |
T |
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| Q |
319 |
attacctgagaagcgatgaaacaaaacaatgtcagnnnnnnngagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtgatgtccat |
418 |
Q |
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| T |
47116866 |
attacctgagaagcgatgaaacaaaacaatgtcagaaaaaaagagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtccat |
47116767 |
T |
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