View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9188_low_7 (Length: 236)
Name: NF9188_low_7
Description: NF9188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9188_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 41679085 - 41679302
Alignment:
| Q |
1 |
tgaacacaaacaggtatacgtacatgtacacatacatatatagagaaacaaacaatgagatatcattgaataacatgatgaaaatgatatcaatcccaaa |
100 |
Q |
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| T |
41679085 |
tgaacacaaagaggtatacgtacatgtacacatacatatatagagaaacaaacaatgaaatatcatagaaaaacatgatgaaaatgatatcaatcccaaa |
41679184 |
T |
|
| Q |
101 |
tcatgacaactgcaattacagcaacaccaaaaagcactgccagaaacctaaaccatggagtgtcgaaacggctcttcctctgcggtttgaagcctttaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41679185 |
tcatgacaactgcaattacagcaacaccaaaaagcacagccagaaacctaaaccatggagtgtcgaaacggctcttcctctgcggtttgaagcctttaga |
41679284 |
T |
|
| Q |
201 |
tatcaaatgattgatagc |
218 |
Q |
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|||||||||||||||||| |
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| T |
41679285 |
tatcaaatgattgatagc |
41679302 |
T |
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