View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9195_high_2 (Length: 254)
Name: NF9195_high_2
Description: NF9195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9195_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 49941741 - 49941986
Alignment:
| Q |
1 |
ttcatatgtagattttctaatatttcatatgcattatttctttatgatagaaaattacctaatgaatataaagctcattagtcatgtgacacttttaata |
100 |
Q |
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| T |
49941741 |
ttcatatgtagattttctaatatttcatatgcattatttctttatgatagaaaattacctaatgaatataaagctcattagtcatgtgacacttttaata |
49941840 |
T |
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| Q |
101 |
taagtattgtttggtgaacaataaaaatacagtgcataagcaatggctcggttgcttttctagagaattacaaatgaaacatatcaaaaggggattgcac |
200 |
Q |
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| T |
49941841 |
taagtattgtttggtgaacaataaaaatacagtgcataagcaatggctcggttgcttttctagagaattacaaatgaaacatatcaaaaggggattgcac |
49941940 |
T |
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| Q |
201 |
aaagcattttaatactgaaatatggaaaacatacagtgaaacacga |
246 |
Q |
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| T |
49941941 |
aaagcattttaatactgaaatatggaaaacatacagtgaaacacga |
49941986 |
T |
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