View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9195_low_6 (Length: 370)

Name: NF9195_low_6
Description: NF9195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9195_low_6
NF9195_low_6
[»] scaffold0004 (3 HSPs)
scaffold0004 (27-272)||(346497-346742)
scaffold0004 (274-357)||(350997-351080)
scaffold0004 (274-357)||(345676-345759)
[»] chr7 (29 HSPs)
chr7 (27-272)||(16647513-16647758)
chr7 (27-272)||(25498143-25498388)
chr7 (27-272)||(32147568-32147813)
chr7 (27-272)||(571510-571755)
chr7 (27-272)||(17621874-17622119)
chr7 (27-272)||(42163079-42163324)
chr7 (27-272)||(42208007-42208241)
chr7 (274-353)||(16648494-16648573)
chr7 (274-353)||(17622855-17622934)
chr7 (27-242)||(7562311-7562549)
chr7 (275-356)||(42167627-42167708)
chr7 (279-357)||(25493915-25493993)
chr7 (279-357)||(25499152-25499230)
chr7 (274-357)||(557877-557960)
chr7 (274-357)||(32148548-32148631)
chr7 (274-357)||(576060-576143)
chr7 (274-340)||(42208964-42209030)
chr7 (277-357)||(44655673-44655753)
chr7 (273-336)||(26456872-26456935)
chr7 (34-125)||(22477709-22477800)
chr7 (132-191)||(20124434-20124494)
chr7 (135-202)||(34325481-34325549)
chr7 (19-78)||(20124570-20124628)
chr7 (142-244)||(22477835-22477937)
chr7 (287-337)||(38011710-38011760)
chr7 (291-331)||(11726513-11726553)
chr7 (27-78)||(341102-341153)
chr7 (274-322)||(30027341-30027389)
chr7 (244-272)||(44659815-44659843)
[»] chr4 (25 HSPs)
chr4 (27-272)||(53981183-53981428)
chr4 (27-272)||(20193417-20193662)
chr4 (27-131)||(20844142-20844246)
chr4 (274-357)||(6156622-6156705)
chr4 (274-357)||(6162319-6162402)
chr4 (274-357)||(20192597-20192680)
chr4 (274-357)||(20197961-20198044)
chr4 (27-242)||(22748098-22748337)
chr4 (275-356)||(53982167-53982247)
chr4 (132-244)||(53528772-53528885)
chr4 (34-125)||(26996420-26996514)
chr4 (27-125)||(12747377-12747475)
chr4 (132-239)||(19569625-19569733)
chr4 (132-242)||(13999086-13999197)
chr4 (27-125)||(13999223-13999316)
chr4 (135-241)||(2925097-2925204)
chr4 (298-357)||(12733923-12733982)
chr4 (132-242)||(26996283-26996394)
chr4 (28-78)||(53528976-53529026)
chr4 (65-125)||(53528910-53528970)
chr4 (51-125)||(19569758-19569833)
chr4 (56-125)||(3019604-3019674)
chr4 (142-241)||(12747510-12747611)
chr4 (292-357)||(28295239-28295303)
chr4 (85-125)||(2925029-2925069)
[»] chr3 (30 HSPs)
chr3 (27-272)||(9725508-9725753)
chr3 (27-272)||(23343466-23343711)
chr3 (27-272)||(13989922-13990167)
chr3 (27-272)||(2169475-2169720)
chr3 (82-272)||(13981502-13981692)
chr3 (274-357)||(3110514-3110597)
chr3 (274-357)||(3112131-3112214)
chr3 (274-357)||(40802567-40802650)
chr3 (274-357)||(2174223-2174306)
chr3 (274-357)||(13990903-13990986)
chr3 (274-357)||(23338900-23338983)
chr3 (274-357)||(23344447-23344530)
chr3 (274-357)||(40800643-40800726)
chr3 (274-357)||(2168656-2168739)
chr3 (274-357)||(13985331-13985414)
chr3 (274-357)||(9730318-9730401)
chr3 (274-357)||(48216341-48216424)
chr3 (274-357)||(13980661-13980744)
chr3 (27-244)||(13925644-13925880)
chr3 (274-357)||(13991993-13992076)
chr3 (274-338)||(34578841-34578905)
chr3 (274-316)||(9724670-9724712)
chr3 (149-245)||(26829968-26830064)
chr3 (27-125)||(17032370-17032468)
chr3 (132-183)||(17032293-17032345)
chr3 (27-78)||(21882723-21882774)
chr3 (27-70)||(26830275-26830318)
chr3 (37-73)||(7462235-7462271)
chr3 (313-357)||(9721568-9721612)
chr3 (295-331)||(19307751-19307787)
[»] chr2 (36 HSPs)
chr2 (27-272)||(7910787-7911032)
chr2 (27-272)||(22429436-22429681)
chr2 (27-272)||(22435030-22435275)
chr2 (27-272)||(635372-635617)
chr2 (27-272)||(14897873-14898118)
chr2 (27-272)||(1524822-1525067)
chr2 (27-272)||(43776080-43776325)
chr2 (274-357)||(630802-630885)
chr2 (274-357)||(636353-636436)
chr2 (274-357)||(7909968-7910051)
chr2 (274-357)||(7917423-7917506)
chr2 (274-357)||(22430419-22430502)
chr2 (274-357)||(22436013-22436096)
chr2 (274-357)||(43777062-43777145)
chr2 (275-357)||(14893302-14893384)
chr2 (275-356)||(26694225-26694306)
chr2 (275-356)||(26702321-26702402)
chr2 (274-357)||(22425049-22425132)
chr2 (274-357)||(14898854-14898937)
chr2 (274-357)||(43771536-43771617)
chr2 (134-244)||(25229921-25230032)
chr2 (27-244)||(16444168-16444404)
chr2 (27-242)||(19911392-19911626)
chr2 (33-242)||(11311169-11311401)
chr2 (27-125)||(19088723-19088824)
chr2 (274-357)||(1519213-1519300)
chr2 (133-244)||(21290398-21290510)
chr2 (27-242)||(7385617-7385851)
chr2 (274-338)||(1525713-1525783)
chr2 (27-114)||(21290277-21290364)
chr2 (133-242)||(19088586-19088696)
chr2 (27-78)||(25231289-25231340)
chr2 (295-355)||(14188410-14188470)
chr2 (295-325)||(19052381-19052411)
chr2 (27-76)||(17320372-17320421)
chr2 (85-125)||(25230058-25230098)
[»] chr1 (33 HSPs)
chr1 (27-272)||(15715712-15715957)
chr1 (27-272)||(33493760-33493994)
chr1 (274-357)||(15716695-15716778)
chr1 (274-357)||(27178975-27179058)
chr1 (274-357)||(27194976-27195059)
chr1 (274-357)||(15711114-15711197)
chr1 (274-357)||(26711482-26711565)
chr1 (273-357)||(33498424-33498508)
chr1 (40-138)||(22577009-22577110)
chr1 (27-244)||(146187-146423)
chr1 (133-244)||(3617643-3617753)
chr1 (133-244)||(17720881-17720993)
chr1 (27-126)||(40275053-40275157)
chr1 (287-357)||(17721823-17721893)
chr1 (133-242)||(27420550-27420660)
chr1 (134-242)||(29544257-29544366)
chr1 (273-332)||(33492967-33493026)
chr1 (133-244)||(11442498-11442610)
chr1 (132-242)||(15551974-15552085)
chr1 (40-126)||(29544395-29544484)
chr1 (155-242)||(40275156-40275243)
chr1 (33-119)||(3615145-3615231)
chr1 (33-125)||(26027982-26028077)
chr1 (154-242)||(26027847-26027935)
chr1 (27-78)||(15552163-15552214)
chr1 (290-357)||(16498729-16498796)
chr1 (280-357)||(3343878-3343955)
chr1 (33-125)||(17721019-17721111)
chr1 (155-243)||(22577143-22577231)
chr1 (27-125)||(27420423-27420523)
chr1 (27-125)||(16168081-16168178)
chr1 (287-330)||(9088672-9088715)
chr1 (295-348)||(29644986-29645039)
[»] scaffold0461 (1 HSPs)
scaffold0461 (27-272)||(13413-13658)
[»] chr5 (18 HSPs)
chr5 (27-272)||(1532490-1532735)
chr5 (27-272)||(30958348-30958593)
chr5 (27-272)||(28367807-28368051)
chr5 (274-357)||(28366986-28367069)
chr5 (274-357)||(28375726-28375809)
chr5 (274-357)||(30963179-30963260)
chr5 (274-357)||(30927388-30927469)
chr5 (273-357)||(34647939-34648023)
chr5 (274-357)||(1536560-1536643)
chr5 (133-227)||(24214221-24214316)
chr5 (27-125)||(24214093-24214194)
chr5 (27-125)||(17945095-17945197)
chr5 (135-202)||(18080792-18080860)
chr5 (291-323)||(14664032-14664064)
chr5 (295-355)||(23775275-23775335)
chr5 (295-355)||(23862229-23862289)
chr5 (134-199)||(17945002-17945068)
chr5 (297-357)||(54442-54502)
[»] chr6 (13 HSPs)
chr6 (27-272)||(14851732-14851977)
chr6 (274-357)||(14856008-14856091)
chr6 (275-356)||(26680643-26680723)
chr6 (274-357)||(14847150-14847233)
chr6 (27-243)||(6932151-6932377)
chr6 (27-242)||(19441910-19442148)
chr6 (27-125)||(17270903-17271001)
chr6 (27-242)||(25394828-25395066)
chr6 (134-243)||(17271028-17271138)
chr6 (291-357)||(10345728-10345793)
chr6 (28-78)||(19817350-19817400)
chr6 (277-357)||(13466763-13466845)
chr6 (291-357)||(13461952-13462020)
[»] chr8 (16 HSPs)
chr8 (274-357)||(12756167-12756250)
chr8 (274-357)||(24052039-24052122)
chr8 (275-355)||(41043551-41043631)
chr8 (27-244)||(8509083-8509319)
chr8 (27-242)||(10738089-10738323)
chr8 (283-356)||(41048932-41049005)
chr8 (27-125)||(28349145-28349245)
chr8 (27-125)||(17909087-17909189)
chr8 (27-78)||(16846527-16846578)
chr8 (134-227)||(17908966-17909060)
chr8 (82-125)||(16846601-16846644)
chr8 (159-202)||(23428442-23428485)
chr8 (58-125)||(23428539-23428606)
chr8 (142-228)||(28349280-28349367)
chr8 (301-331)||(24042894-24042924)
chr8 (142-202)||(16846679-16846742)
[»] scaffold0211 (1 HSPs)
scaffold0211 (274-357)||(26975-27058)
[»] scaffold0169 (2 HSPs)
scaffold0169 (274-337)||(11029-11092)
scaffold0169 (274-330)||(8767-8823)
[»] scaffold0121 (1 HSPs)
scaffold0121 (279-357)||(11431-11509)
[»] scaffold0066 (2 HSPs)
scaffold0066 (40-126)||(11167-11256)
scaffold0066 (143-242)||(11030-11130)
[»] scaffold0124 (1 HSPs)
scaffold0124 (279-357)||(39540-39618)
[»] scaffold0062 (4 HSPs)
scaffold0062 (27-125)||(39343-39441)
scaffold0062 (27-228)||(19064-19284)
scaffold0062 (27-228)||(29232-29452)
scaffold0062 (133-228)||(39221-39317)
[»] scaffold0020 (1 HSPs)
scaffold0020 (133-242)||(122294-122404)


Alignment Details
Target: scaffold0004 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 346497 - 346742
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  346497 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 346596  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  346597 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 346696  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  346697 caagtagtttcatataatacaaataaattgtagcacattttcatat 346742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 351080 - 350997
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  351080 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcataagagaataat 350997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 345759 - 345676
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||    
T  345759 atattgtgcttactccccaagtcattgtatttctctataaatagagctcacatgtaacctaattatacatcataagaaaataat 345676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 16647758 - 16647513
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16647758 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 16647659  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16647658 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 16647559  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16647558 caagtagtttcatataatacaaataaattgtagcacattttcatat 16647513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 25498388 - 25498143
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25498388 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 25498289  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25498288 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtatgtttcactcaaatgaaatcctt 25498189  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25498188 caagtagtttcatataattcaaataaattgtagcacattttcatat 25498143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 32147813 - 32147568
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32147813 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 32147714  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32147713 atatacgattataacaaattcatttcaaatccttaaaatggacaaataatgtcatctttccaatagatttgatattacgtttcactcaaatgaaatcctt 32147614  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32147613 caagtagtttcatataatacaaataaattgtagcacattttcatat 32147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 571510 - 571755
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  571510 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 571609  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571610 atataatattataacaaattcatttcaaatccttaaaatggacgaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 571709  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  571710 caagtagtttcatataatacaaataaattgtagcacattttcatat 571755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 17622119 - 17621874
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17622119 atcaagtgacatcacaatcattctagtacataatcaattagatatgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 17622020  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17622019 atatacaattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatattacgtttcactcaaatgaaatcctt 17621920  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17621919 caagtagtttcatataatacaaataaattgtagcatattttcatat 17621874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 42163079 - 42163324
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  42163079 atcaagtgacatcacattcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttataatctctgcaggagttctaatat 42163178  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42163179 atatatgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 42163278  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  42163279 caagaagtttcatataataaaaataaattgtagcacattttcatat 42163324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 42208241 - 42208007
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42208241 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 42208142  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42208141 atatacgattataacaaattcatttcaaatccttaa-----------gatgtcatctttccaatagatttgatagtacgtttcattcaaatgaaatcctt 42208053  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  42208052 caagtagtttcatataattcaaataaattgtagcacattttcatat 42208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 16648494 - 16648573
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaa 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16648494 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaa 16648573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 17622855 - 17622934
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaa 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17622855 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaa 17622934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 7562549 - 7562311
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataa---caaaatttagaatctcttcaggagttctaa 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||   |||| ||||||||||||||| || ||||||    
T  7562549 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccatatcaacatttatataataacaaattttagaatctcttcaagatttctaa 7562450  T
Q  124 ta----tatatac---------------gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagta 203  Q
    ||    | |||||               ||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| |||||  ||||||||||    
T  7562449 taatattttataccattatcataaaatcgattataacgaattcattttcaaatccttaaaatggacaaatgatgtcttcttttcaataattttgatagta 7562350  T
Q  204 cgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
     || | || |||||||||||||||||| |||||||||||    
T  7562349 tgtattacacaaatgaaatccttcaaggagtttcatata 7562311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 275 - 356
Target Start/End: Complemental strand, 42167708 - 42167627
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  42167708 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagaaaataa 42167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 25493915 - 25493993
Alignment:
Q  279 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25493915 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacataatgatacatcacaagagaataat 25493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 25499152 - 25499230
Alignment:
Q  279 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25499152 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatgatacatcacaagagaataat 25499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 557960 - 557877
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  557960 atattgtgcttgcttcccaagtcattgtatttctctataaatagagttcatatgtaacctaattgtacatcacaagagaataat 557877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 32148548 - 32148631
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  32148548 atattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagaaaataat 32148631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 576143 - 576060
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  576143 atattgtgattgcttcccaagtcattgtatttctctataaatagagttcatatgtaacctaattgtacatcacaagagaataat 576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 42208964 - 42209030
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattata 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42208964 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattata 42209030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 357
Target Start/End: Original strand, 44655673 - 44655753
Alignment:
Q  277 ttgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  44655673 ttgtgcttgctacccaagtctttgtatttctctataaattaagctcatatgtaacctaattatacatcacaagagaataat 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 26456935 - 26456872
Alignment:
Q  273 tatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaat 336  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  26456935 tatattgcgcttgctctccaaatcattgtatttctctataaatagagctcatatgtaacttaat 26456872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 22477709 - 22477800
Alignment:
Q  34 gacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    |||||||||||||||||  ||||||||||| ||||||||| ||||   || ||||||||||||| |||||| |||| |||||||||||||||    
T  22477709 gacatcacaatcattctgttacataatcaactagatttgttcatatcgacctttatataacaaattttagactctcatcaggagttctaata 22477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 20124494 - 20124434
Alignment:
Q  132 cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaata 191  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  20124494 cgattataacaaattcatttccaaatccttaaaatggacaaatgatgttatcttttcaata 20124434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 34325549 - 34325481
Alignment:
Q  135 ttataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagt 202  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |||||  |||||||||    
T  34325549 ttataagaaattcatttccatatctttaaaatggacaaatgatgtcatcttttcaataattttgatagt 34325481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 20124628 - 20124570
Alignment:
Q  19 tactcacaatcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||||||| ||| ||| ||||||||||||||| |||||| |||||||||||||||||||    
T  20124628 tactcacaa-caagtgatatcacaatcattctattacatagtcaattagatttgtccata 20124570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 22477835 - 22477937
Alignment:
Q  142 aaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcata 240  Q
    ||||||||||| | |||||||||||||| |||| ||||||||||| |||||   ||||||||| || | || ||||||||||||||||  |||||| |||    
T  22477835 aaattcatttccatatccttaaaatggagaaat-atgtcatcttttcaataatcttgatagtatgtcttacacaaatgaaatccttcagatagtttaata 22477933  T
Q  241 taat 244  Q
    ||||    
T  22477934 taat 22477937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 38011760 - 38011710
Alignment:
Q  287 tccccaagtcattgtatttctctataaatagagctcatatgtaacttaatt 337  Q
    |||||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  38011760 tccccaagtcattgtattactctatctatagagctcatatgtaacctaatt 38011710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 11726553 - 11726513
Alignment:
Q  291 caagtcattgtatttctctataaatagagctcatatgtaac 331  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  11726553 caagttattgtatttctctataaatagagctcacatgtaac 11726513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 341102 - 341153
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||| |||||||||||||||| ||||||| | |||||||||| ||||||||    
T  341102 atcaagtgacatcacaatcattatagtacacagtcaattagatgtgtccata 341153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 30027389 - 30027341
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctc 322  Q
    |||||||| |||||||  |||||| ||||||| ||||||||||||||||    
T  30027389 atattgtgtttgctcctaaagtcactgtatttttctataaatagagctc 30027341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 44659843 - 44659815
Alignment:
Q  244 tacaaataaattgtagcacattttcatat 272  Q
    |||||||||||||||||||||||||||||    
T  44659843 tacaaataaattgtagcacattttcatat 44659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 53981428 - 53981183
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53981428 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 53981329  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53981328 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 53981229  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53981228 caagtagtttcatataatacaaataaattgtagcacattttcatat 53981183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 20193417 - 20193662
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20193417 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 20193516  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  20193517 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatattacgattcactcaaatgaaatcctt 20193616  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20193617 caagtagtttcatataatacaaataaattgtagcacattttcatat 20193662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 20844246 - 20844142
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  20844246 atcaagtgacatcacaatcattctagtacataatcaattagatttgttcataaaaacatttatataacaaaatttagaatctctgcaggagttctaatat 20844147  T
Q  127 atata 131  Q
    |||||    
T  20844146 atata 20844142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 6156622 - 6156705
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6156622 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 6156705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 6162319 - 6162402
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6162319 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 6162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 20192680 - 20192597
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  20192680 atattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagagaataat 20192597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 20198044 - 20197961
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  20198044 atattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagagaataat 20197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 22748337 - 22748098
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata-aacacatttatataa---caaaatttagaatctcttcaggagttcta 122  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||   |||| |||||||||||||||||| |||||    
T  22748337 atcaagtgacatcacaaccattctaatacataatcaattagatttgtccatataaaacatttatataataacaaattttagaatctcttcaggatttcta 22748238  T
Q  123 ata------tatata-------------cgattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagt 202  Q
    |||      |||||              |||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||  |||||||||    
T  22748237 ataatattttatatcattatcataaaatcgattataaagaatttattttcaaatccttaaaatggacaaatgatgtcatcttttcagtaattttgatagt 22748138  T
Q  203 acgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
    | || | ||||||||||||||||||| | |||||||||||    
T  22748137 atgtattactcaaatgaaatccttcagggagtttcatata 22748098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 53982167 - 53982247
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53982167 tattgtgcttgctccc-aagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 53982247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 53528885 - 53528772
Alignment:
Q  132 cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaag 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||  || |||| |||||||||||||| | |    
T  53528885 cgattataagaaattcatttccaaatccttaaaatggacaaatgatgtcacctttccaatagttttgatagtgtgtgtcacacaaatgaaatcctttagg 53528786  T
Q  231 tagtttcatataat 244  Q
     |||||||||||||    
T  53528785 gagtttcatataat 53528772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 26996514 - 26996420
Alignment:
Q  34 gacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatata---acaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||   ||||| ||||||||||||||| || ||||||||    
T  26996514 gacatcacaatcattctagtacataatcaattagatttgtccatataaccatttatataacaacaaattttagaatctcttcatgatttctaata 26996420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 12747377 - 12747475
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| |||||||||||||||| || ||||||||||| ||||||||| ||||   || ||||||||||||| ||||||||||| ||||| |||||||||    
T  12747377 atcaagtgacatcacaatcattttattacataatcaactagatttgttcatatcgacctttatataacaaattttagaatctcatcaggtgttctaata 12747475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 19569733 - 19569625
Alignment:
Q  132 cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaag 230  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||||  |||| |||||| |||||||||| || | |   ||||||||||||||| |    
T  19569733 cgattataacaaattcatttctaaatcctaaaaatggacaaatgatgtccccttttcaatagttttgatagtatgtcttaggaaaatgaaatccttcagg 19569634  T
Q  231 tagtttcat 239  Q
     ||||||||    
T  19569633 gagtttcat 19569625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 13999197 - 13999086
Alignment:
Q  132 cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaag 230  Q
    |||||||||  |||| ||||| ||||||||||||||| |||| ||||||||||||  ||||  |||||||||| || | || |||||||||||||||| |    
T  13999197 cgattataacgaatttatttccaaatccttaaaatgggcaaacgatgtcatctttttaataattttgatagtatgtattacgcaaatgaaatccttcatg 13999098  T
Q  231 tagtttcatata 242  Q
     |||||||||||    
T  13999097 gagtttcatata 13999086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 13999316 - 13999223
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| |||||||||||||||| || ||||||||||| ||||||||||||||   |||     |||||||||||||||||||||||| || ||||||||    
T  13999316 atcaagtgacatcacaatcattatattacataatcaactagatttgtccatatcaaca-----ataacaaaatttagaatctcttcaagacttctaata 13999223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 2925097 - 2925204
Alignment:
Q  135 ttataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtag 233  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |||||  ||||||| |   | | || |||||||||||||||| | ||    
T  2925097 ttataagaaattcatttccatatctttaaaatggacaaatgatgtcatcttttcaataattttgatattgtctattacacaaatgaaatccttcagggag 2925196  T
Q  234 tttcatat 241  Q
     |||||||    
T  2925197 cttcatat 2925204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 357
Target Start/End: Complemental strand, 12733982 - 12733923
Alignment:
Q  298 ttgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||| ||||||| |||||    ||||||||||||||||    
T  12733982 ttgtatttctctataaatagagctcacatgtaacctaattggttatcacaagagaataat 12733923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 26996394 - 26996283
Alignment:
Q  132 cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaag 230  Q
    |||||||||  |||||||||| ||||||| ||||| || |||||||||||| ||| |||||  |||||||||  || | |  |||||||||||||||| |    
T  26996394 cgattataacgaattcatttccaaatcctaaaaatagataaatgatgtcatattttcaataattttgatagtgtgtattatgcaaatgaaatccttcagg 26996295  T
Q  231 tagtttcatata 242  Q
     |||||||||||    
T  26996294 gagtttcatata 26996283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 53529026 - 53528976
Alignment:
Q  28 tcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    |||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  53529026 tcaagtgacatcacaatcattccagtacataatcaaataaatttgtccata 53528976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 53528970 - 53528910
Alignment:
Q  65 tagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    |||||||||||| |   ||||||||||||||||  |||||||||||||| |||||||||||    
T  53528970 tagatttgtccacattaacatttatataacaaatgttagaatctcttcatgagttctaata 53528910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 19569833 - 19569758
Alignment:
Q  51 agtacataatcaattagatttgtccataaacacatttatataacaaaat-ttagaatctcttcaggagttctaata 125  Q
    |||| |||||||| |||||||| |||||   || ||||||||| ||||  ||||||||||||||||||||||||||    
T  19569833 agtatataatcaactagatttgcccatatcaacttttatataaaaaaaaattagaatctcttcaggagttctaata 19569758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 3019604 - 3019674
Alignment:
Q  56 ataatcaattagatttgtccataa-acacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    |||||||| |||||||||||||   | | |||||||||||||| ||||||||| ||||||||||| |||||    
T  3019604 ataatcaactagatttgtccatttcaaatatttatataacaaattttagaatcccttcaggagttataata 3019674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 12747510 - 12747611
Alignment:
Q  142 aaattcatttcaa-atccttaaaatgg-acaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcat 239  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||| |||||  |||||||||   | | || |||||||||||||||| | || |||||    
T  12747510 aaattcatttccatatctttaaaatgggacaaatgatgtcatcttttcaataattttgatagtgtctattacacaaatgaaatccttcagggagcttcat 12747609  T
Q  240 at 241  Q
    ||    
T  12747610 at 12747611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 357
Target Start/End: Complemental strand, 28295303 - 28295239
Alignment:
Q  292 aagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||| ||||| ||||||||||||||||||||| ||||||| || || |||| |||| |||||||||    
T  28295303 aagttattgtctttctctataaatagagctcacatgtaacatacttgtaca-cacatgagaataat 28295239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 2925029 - 2925069
Alignment:
Q  85 tttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||||||||| ||||||||||| ||||| |||||||||    
T  2925029 tttatataacaaattttagaatctcatcaggtgttctaata 2925069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 9725508 - 9725753
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9725508 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 9725607  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9725608 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 9725707  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9725708 caagtagtttcatataatacaaataaattgtagcacattttcatat 9725753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 23343711 - 23343466
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23343711 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 23343612  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23343611 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 23343512  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23343511 caagtagtttcatataatacaaataaattgtagcacattttcatat 23343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 13990167 - 13989922
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13990167 atcaagtgacatcacaatcattctagtacataatcaattagatatgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 13990068  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13990067 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttcctatagatttgatagtacgtttcactcaaatgaaatcctt 13989968  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13989967 caagtagtttcatataatacaaataaattgtagcacattttcatat 13989922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 2169475 - 2169720
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2169475 atcaagtgacatcacaatcattctagtacataatcaattagatatgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 2169574  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2169575 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatatttccaatagatttgatagtacatttcactcaaatgaaatcctt 2169674  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2169675 caagtagtttcatataatacaaataaattgtagcacattttcatat 2169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 13981502 - 13981692
Alignment:
Q  82 acatttatataacaaaatttagaatctcttcaggagttctaatatatatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13981502 acatttatataacaaaatttagaatctcttcaggagttctaatatatatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcat 13981601  T
Q  182 ctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13981602 atttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatataattcaaataaattgtagcacattttcatat 13981692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 3110597 - 3110514
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3110597 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 3110514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 3112214 - 3112131
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3112214 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 3112131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 40802650 - 40802567
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40802650 atattgtgcttgcttcccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 40802567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 2174306 - 2174223
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2174306 atattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 2174223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 13990903 - 13990986
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13990903 atattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 13990986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 23338900 - 23338983
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  23338900 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatagatcacaagagaataat 23338983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 23344447 - 23344530
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  23344447 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatagatcacaagagaataat 23344530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 40800726 - 40800643
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  40800726 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacataacaagagaataat 40800643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 2168739 - 2168656
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  2168739 atattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtagcctaattatacatcacaagagaataat 2168656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 13985331 - 13985414
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13985331 atattgtgtttgctccccaagtcattgtatttctctataaatagagatcatatgtaacctaattatacatcacaagagaataat 13985414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 9730401 - 9730318
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  9730401 atattgtgcttgctccccaaatcattgtatttctctataaatagagctcatatgtaatctaattatacatgacaagagaataat 9730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 48216424 - 48216341
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  48216424 atattttggttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatatatcacaagagaataat 48216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 13980744 - 13980661
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||  ||||||||||||    
T  13980744 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaatctaattgtacataccaagagaataat 13980661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 13925880 - 13925644
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttc---taa 123  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||   || ||||||||||||| ||||||||||| |||||| |||   |||    
T  13925880 atcaagtgacatcacaatcattctattacataatcaactagatttgttcatatcaacctttatataacaaattttagaatctcatcaggatttctaataa 13925781  T
Q  124 tatatatac---------------gattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
    ||| |||||               |||||||| ||||||| ||| | ||||||||||||||||||||||||||||||| |||||  |||||||||| ||     
T  13925780 tatttatacgattatcataaaattgattataagaaattcaattcgatatccttaaaatggacaaatgatgtcatcttttcaataactttgatagtatgtc 13925681  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatataat 244  Q
    | || ||||| |||||||||| | ||||| |||||||    
T  13925680 ttacgcaaataaaatccttcagggagtttaatataat 13925644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 13992076 - 13991993
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||  ||||||||||| ||| | ||||||||||||||||||| ||| |||||||||||  ||||||||||||    
T  13992076 atattgtgcttgctcttcaagtcattgtgtttatgtataaatagagctcatatgcaacctaattatacatatcaagagaataat 13991993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 338
Target Start/End: Complemental strand, 34578905 - 34578841
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaatta 338  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  34578905 atattgtacttattccccaagtcattgtatttctctataaatagagcttatatgtaacctaatta 34578841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 9724712 - 9724670
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaata 316  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9724712 atattgtgcttgctccccaagtcattgtatttctctataaata 9724670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 26830064 - 26829968
Alignment:
Q  149 tttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatataata 245  Q
    ||||||||  ||||||||||||||||||||||||| | |||||| ||| |||||| || | ||  |||| ||||||||| || |||| |||||||||    
T  26830064 tttcaaatatttaaaatggacaaatgatgtcatctcttcaatagttttaatagtatgtctaacggaaattaaatccttcgaggagttccatataata 26829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 17032468 - 17032370
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| |||||||||||| |||||| ||||||||||| || ||||||||||    || ||| ||||||||| |||||||| | |||| |||||| ||||    
T  17032468 atcaagtgacatcacaattattctattacataatcaactacatttgtccatctcaacctttgtataacaaattttagaatttattcaagagttccaata 17032370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 17032345 - 17032293
Alignment:
Q  132 cgattataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatct 183  Q
    ||||||||| ||||||||||| | ||| |||||||||||||||||||||||||    
T  17032345 cgattataagaaattcatttccatatcattaaaatggacaaatgatgtcatct 17032293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 21882774 - 21882723
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||| |||||||||||||||| ||||||| | |||||||||| ||||||||    
T  21882774 atcaagtgacatcacaatcattatagtacacagtcaattagatgtgtccata 21882723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 26830318 - 26830275
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatt 70  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||    
T  26830318 atcaagtgacatcataatcattctagtacataatcaaatagatt 26830275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 7462271 - 7462235
Alignment:
Q  37 atcacaatcattctagtacataatcaattagatttgt 73  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  7462271 atcacaatcattctagtgcataatcaaatagatttgt 7462235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 9721612 - 9721568
Alignment:
Q  313 aatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||| ||||||||||||   |||||||||||||||||||||||||    
T  9721612 aataaagctcatatgtactctaattatacatcacaagagaataat 9721568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 19307787 - 19307751
Alignment:
Q  295 tcattgtatttctctataaatagagctcatatgtaac 331  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  19307787 tcattgtatttctctataaatagagatcacatgtaac 19307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 7910787 - 7911032
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7910787 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 7910886  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7910887 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 7910986  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7910987 caagtagtttcatataatacaaataaattgtagcacattttcatat 7911032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 22429681 - 22429436
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22429681 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 22429582  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22429581 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 22429482  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22429481 caagtagtttcatataatacaaataaattgtagcacattttcatat 22429436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 22435275 - 22435030
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22435275 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 22435176  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22435175 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 22435076  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22435075 caagtagtttcatataatacaaataaattgtagcacattttcatat 22435030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 635617 - 635372
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  635617 atcaagtgacatcacaatcattctagtacataatcaattagatatgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 635518  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  635517 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 635418  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  635417 caagtagtttcatataatacaaataaattgtagcacattttcatat 635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 14898118 - 14897873
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14898118 atcaagtgacatcacaatcattctagtacataatcaattagatatgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 14898019  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14898018 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 14897919  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14897918 caagtagtttcatataatacaaataaattgtagcacattttcatat 14897873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 1525067 - 1524822
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1525067 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaatatttatataacaaaatttagaatctcttcaggagttctaatat 1524968  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1524967 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatatttccaatagatttgatagtacgtttcactcaaatgaaatcctt 1524868  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1524867 caagtagtttcatataatacaaataaattgtagcacattttcatat 1524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 43776325 - 43776080
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43776325 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 43776226  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43776225 atataatattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 43776126  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43776125 caagtagtttcatataatacaaataaattgtagcacattttcatat 43776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 630802 - 630885
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  630802 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 630885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 636353 - 636436
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  636353 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 636436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 7910051 - 7909968
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7910051 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 7909968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 7917506 - 7917423
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7917506 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 7917423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 22430419 - 22430502
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22430419 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 22430502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 22436013 - 22436096
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22436013 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 22436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 43777062 - 43777145
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43777062 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 43777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 14893302 - 14893384
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14893302 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 14893384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 26694225 - 26694306
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26694225 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 26694306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 26702321 - 26702402
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26702321 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 26702402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 22425049 - 22425132
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  22425049 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacccaattatacatcacaagagaataat 22425132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 14898854 - 14898937
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14898854 atattgtgcttgctccctaaatcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 14898937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 43771536 - 43771617
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  43771536 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacctaattatacatcacaagagaataat 43771617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 25230032 - 25229921
Alignment:
Q  134 attataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagta 232  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||  |||||||||| || | || |||||||||||||||||| |    
T  25230032 attataagaaattcatttccatatccttaaaatggacaaatgatgtcatcttttcaataactttgatagtatgtcttacgcaaatgaaatccttcaagga 25229933  T
Q  233 gtttcatataat 244  Q
    |||| |||||||    
T  25229932 gtttgatataat 25229921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 16444168 - 16444404
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata- 125  Q
    ||||| |||||||||||||||| || ||||||||||| || |||||||||||   || ||||||||| |||||||| |||||| ||| |||||||||||     
T  16444168 atcaagtgacatcacaatcattatattacataatcaactaaatttgtccatatcaacctttatataaaaaaatttaaaatctcatcacgagttctaataa 16444267  T
Q  126 --tatatacgattat---------------aaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
      | |||||||||||               || |||||||||| || ||||||||||||||||||||||||||||||| |||||  |||||||||| ||     
T  16444268 tatttatacgattatcataaaattgattataagaaattcattttcatatccttaaaatggacaaatgatgtcatcttttcaataactttgatagtatgtc 16444367  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatataat 244  Q
    | |  |||||||||||||||| | ||||| |||||||    
T  16444368 ttatgcaaatgaaatccttcagggagtttaatataat 16444404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 19911626 - 19911392
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata- 125  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||   || ||| ||||||||| ||||||||||  |||||||||||||||     
T  19911626 atcaagtgacatcacaatcattctattacataatcaactagatttgttcatatcaacttttctataacaaattttagaatctaatcaggagttctaataa 19911527  T
Q  126 --tatatac---------------gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
      | |||||               |||||||| |||||||||| || |||||| |||||||||||||||||||||||| |||||  |||||||||| ||     
T  19911526 tgtttatacgattatcataaacttgattataagaaattcatttccatatccttgaaatggacaaatgatgtcatcttttcaataactttgatagtatgtc 19911427  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatata 242  Q
    | || ||||||||||| |||| | ||||| |||||    
T  19911426 ttacgcaaatgaaatctttcatggagtttaatata 19911392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 11311401 - 11311169
Alignment:
Q  33 tgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaata---- 125  Q
    |||||||||||||| | || ||||||||||||||||||||||||||   ||||||||   |||||||| ||||||||||||| |||| ||||||||        
T  11311401 tgacatcacaatcaatataatacataatcaattagatttgtccatatcaacatttatataataacaaattttagaatctctttaggatttctaataatat 11311302  T
Q  126 tatata---------------cgattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttc 209  Q
    | ||||               |||||||||  |||| |||| |||||||||||||||||||||||||||||||||| |||||  |||||||||| || |     
T  11311301 tttataccattatcataaaatcgattataacgaatttatttccaaatccttaaaatggacaaatgatgtcatcttttcaataattttgatagtatgtatt 11311202  T
Q  210 actcaaatgaaatccttcaagtagtttcatata 242  Q
    || ||||||||||| |||| | |||||||||||    
T  11311201 acacaaatgaaatctttcaggaagtttcatata 11311169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 19088824 - 19088723
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaa 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||   |||||||| |||| ||||| || |||| ||||||    
T  19088824 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccatatccccatttataagataacaaattttataatctatttaggatttctaa 19088725  T
Q  124 ta 125  Q
    ||    
T  19088724 ta 19088723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 1519213 - 1519300
Alignment:
Q  274 atattgtgcttgctccccaagtcat----tgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||| |||||| | ||  ||||||||||||    
T  1519213 atattgtgcttgctccccaagtcattcattgtatttctctataaatagagctcatatgtaacctaattagagataccaagagaataat 1519300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 21290398 - 21290510
Alignment:
Q  133 gattataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    |||||||| |||||| |||| | ||| ||||||||||||||||||||||||||| |||||  |||||||||| || | || |||||||||||||||| |     
T  21290398 gattataagaaattcttttccatatctttaaaatggacaaatgatgtcatcttttcaataactttgatagtatgtcttacacaaatgaaatccttcaggg 21290497  T
Q  232 agtttcatataat 244  Q
    ||||| |||||||    
T  21290498 agtttaatataat 21290510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 7385617 - 7385851
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataa---caaaatttagaatctcttcaggagttctaa 123  Q
    ||||| |||||||||||||||||||  | ||||| |||||||||||||||||   ||||||||||||   |||| |||||||| |||||| || ||||||    
T  7385617 atcaagtgacatcacaatcattctaagatataattaattagatttgtccatatcaacatttatataataacaaattttagaatatcttcaagatttctaa 7385716  T
Q  124 tatat-atacgattat---aaaa------------aattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
    ||| | |||| |||||   ||||            |||||||||||||||||||||||||||||||| | |||||||| |||||  ||||| |||| ||     
T  7385717 tattttatactattatcataaaatcgactataatgaattcatttcaaatccttaaaatggacaaatggtatcatcttttcaataattttgagagtatgta 7385816  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatata 242  Q
    | ||  |||||||| |||||| | |||||||||||    
T  7385817 ttacgtaaatgaaacccttcagggagtttcatata 7385851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 1525713 - 1525783
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctc------tataaatagagctcatatgtaacttaatta 338  Q
    |||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||| ||||||    
T  1525713 atattgtgcttgctccccaagtcattgtatttctctataaatataaatagagctcatatgtaacctaatta 1525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 21290277 - 21290364
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcag 114  Q
    ||||| |||||||||||||||| || ||||||||||| |||||||||  ||| | || ||||||||||||| ||| ||||||| ||||    
T  21290277 atcaagtgacatcacaatcattttattacataatcaactagatttgtttatatagacctttatataacaaatttttgaatctcatcag 21290364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 19088696 - 19088586
Alignment:
Q  133 gattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    ||||||||  |||||||||| |||| ||||||||||| |||||||||||| ||| |||||  |||||||||  || | || ||| |||||||||||| |     
T  19088696 gattataacgaattcatttccaaattcttaaaatggaaaaatgatgtcatattttcaataattttgatagtttgtattacgcaagtgaaatccttcaggg 19088597  T
Q  232 agtttcatata 242  Q
    |||||||||||    
T  19088596 agtttcatata 19088586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 25231340 - 25231289
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  25231340 atcaagtgacatcacaatcattctattacataatcaactagatttgttcata 25231289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 14188410 - 14188470
Alignment:
Q  295 tcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaata 355  Q
    |||||||| ||||||||||||||||  || ||||||| ||||| |||| ||||||||||||    
T  14188410 tcattgtacttctctataaatagagaccacatgtaacataattgtacaccacaagagaata 14188470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 19052411 - 19052381
Alignment:
Q  295 tcattgtatttctctataaatagagctcata 325  Q
    |||||||||||||||||||||||||||||||    
T  19052411 tcattgtatttctctataaatagagctcata 19052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 17320372 - 17320421
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtcca 76  Q
    ||||| |||||||  ||||||||| |||||||||||| ||||||||||||    
T  17320372 atcaagtgacatcgtaatcattctcgtacataatcaactagatttgtcca 17320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 25230098 - 25230058
Alignment:
Q  85 tttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||||||||| ||||||||||| ||| |||||||||||    
T  25230098 tttatataacaaattttagaatctcgtcaagagttctaata 25230058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 15715957 - 15715712
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15715957 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 15715858  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15715857 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 15715758  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15715757 caagtagtttcatataatacaaataaattgtagcacattttcatat 15715712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 33493760 - 33493994
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  33493760 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaagagttctaatat 33493859  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||           ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33493860 atatacgattataacaaattcatttcaaatccttaa-----------gatgtcatctttcgaatagatttgatagtatgtttcactcaaatgaaatcctt 33493948  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  33493949 caagtagtttcatataattcaaataaattgtagcacattttcatat 33493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 15716695 - 15716778
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15716695 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacgtaattatacatcacaagagaataat 15716778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 27179058 - 27178975
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27179058 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 27178975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 27195059 - 27194976
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27195059 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 27194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 15711114 - 15711197
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15711114 atattgtgcttgctccccaagtcattgtatttctttataaatagagctcatatgtaacgtaattatacatcacaagagaataat 15711197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 26711565 - 26711482
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  26711565 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattagacatcacaagagaataat 26711482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 33498508 - 33498424
Alignment:
Q  273 tatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  33498508 tatattgtgcttgctccccaagtcattgtatttctctataaatggagcttatatgtaacctaattatacatcacaagagaataat 33498424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 22577009 - 22577110
Alignment:
Q  40 acaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttc---taatatatatacgatt 136  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||| |||||||||||||||||   ||||||||||||||||    
T  22577009 acaatcattctagtacataatcaattagatttgtccatatcaacatttatataacaaactttaaaatctcttcaggagttctaataatatatatacgatt 22577108  T
Q  137 at 138  Q
    ||    
T  22577109 at 22577110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 146187 - 146423
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata- 125  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||| || |   || ||||||||||||| ||||||||||| ||||| |||||||||     
T  146187 atcaagtgacatcacaagcattctattacataatcaattagatttgttcagatcgacctttatataacaaattttagaatctcatcaggtgttctaataa 146286  T
Q  126 --tatatacgattat---------------aaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
      | |||||||||||               || ||||||||||| ||||| ||||||| ||||||||||||||||||| |||||  |||||||||| |||    
T  146287 tatttatacgattatcataaaattgattataagaaattcatttccaaatctttaaaattgacaaatgatgtcatcttttcaataactttgatagtatgtt 146386  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatataat 244  Q
    | || |||| |||||| |||||| ||||| |||||||    
T  146387 ttacgcaaacgaaatcattcaaggagtttaatataat 146423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 3617643 - 3617753
Alignment:
Q  133 gattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagta 232  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||  || |||| |||||||||||||||  | |    
T  3617643 gattataacaaattcatttcaaatccttaaaatagacaaatgatgtcatctttcaaatagttttgat-gtgtgtctcacacaaatgaaatccttctggga 3617741  T
Q  233 gtttcatataat 244  Q
    ||||||||||||    
T  3617742 gtttcatataat 3617753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 17720993 - 17720881
Alignment:
Q  133 gattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    ||||| || ||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||| |  || |||| |||||||||||||||| |     
T  17720993 gattacaacaaattcatttcgaaatccttaaaattgacaaatgatgtcatccttccaatagttttgataatgtgtgtcacacaaatgaaatccttcaggg 17720894  T
Q  232 agtttcatataat 244  Q
    |||||||||||||    
T  17720893 agtttcatataat 17720881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 40275053 - 40275157
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaaca--catttat---ataacaaaatttagaatctcttcaggagttct 121  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |  |||||||   |||||||| |||||||||||||||||| ||||    
T  40275053 atcaagtgacatcacaatcattctagtacataatcaattaaatttgtccatatataaccatttatataataacaaattttagaatctcttcaggatttct 40275152  T
Q  122 aatat 126  Q
    |||||    
T  40275153 aatat 40275157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 17721823 - 17721893
Alignment:
Q  287 tccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  17721823 tccccaagtcattatatttctctataaatagagctcgtatgtaacctaattgtacatcacaagagaataat 17721893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 27420550 - 27420660
Alignment:
Q  133 gattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||| || |||||  |||||||||| || | || |||||||||||| ||| |     
T  27420550 gattataacaaattcatttctaaatccttaaaatggacaaatgatgtcatcatttcaataattttgatagtatgtataacgcaaatgaaatccgtcaggg 27420649  T
Q  232 agtttcatata 242  Q
    |||||||||||    
T  27420650 agtttcatata 27420660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 29544366 - 29544257
Alignment:
Q  134 attataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagta 232  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||  |||||||||| || | || ||||| |||||||| | | |    
T  29544366 attataaagaattcatttccaaatccttaaaatggacaaatgatgtcatcttttcaataattttgatagtatgtattacacaaataaaatcctttaggga 29544267  T
Q  233 gtttcatata 242  Q
    ||||||||||    
T  29544266 gtttcatata 29544257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 33493026 - 33492967
Alignment:
Q  273 tatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaact 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33493026 tatattgtgcttgctccctaagtcattgtatttctctataaatagagcttatatgtaact 33492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 11442498 - 11442610
Alignment:
Q  133 gattataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    |||||||| ||||||||||| | |||||||||||||||||||||| |||||||| |||||  |||||||||| || | || |||||||| ||||||| |     
T  11442498 gattataagaaattcatttccatatccttaaaatggacaaatgatatcatcttttcaataactttgatagtatgtcttacgcaaatgaagtccttcaggg 11442597  T
Q  232 agtttcatataat 244  Q
    ||||| |||||||    
T  11442598 agtttaatataat 11442610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 15552085 - 15551974
Alignment:
Q  132 cgattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaag 230  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||   || |||||| || | |  ||||| |||||||||| |    
T  15552085 cgattataacaaattcattttcaaatccttaaaatggacaaatgatgtcatcttttcaataatgttaatagtatgtattatgcaaatcaaatccttcagg 15551986  T
Q  231 tagtttcatata 242  Q
     |||||||||||    
T  15551985 gagtttcatata 15551974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 29544484 - 29544395
Alignment:
Q  40 acaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaatat 126  Q
    |||||||||||||||||||||||||||||||||||||||   |||||| |   |||||||| ||||||||||||| |||| |||||||||    
T  29544484 acaatcattctagtacataatcaattagatttgtccatatcaacatttgtataataacaaattttagaatctctttaggatttctaatat 29544395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 40275156 - 40275243
Alignment:
Q  155 atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||  || | || |||||||||||||||| | |||||||||||    
T  40275156 atccttaaaatggacaaatgatgtcatcttttcaataattttgatagtttgtgttacgcaaatgaaatccttcagggagtttcatata 40275243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 3615145 - 3615231
Alignment:
Q  33 tgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagtt 119  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||   ||||||||||||||||  ||||||||| |||| |||||    
T  3615145 tgacaacacaatcattctagtacataatcaaccagatttgtccatatcaacatttatataacaaatgttagaatcttttcatgagtt 3615231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 26028077 - 26027982
Alignment:
Q  33 tgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||   ||||||||   |||||||| |||||||| ||||||||| ||||||||    
T  26028077 tgacatcacaatcattctaatacacaatcaattagatttgtctatatcaacatttatataataacaaattttagaatatcttcaggatttctaata 26027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 26027935 - 26027847
Alignment:
Q  154 aatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
    |||||||||||||||||||||||||||||||| |||||  ||| ||| || || | |||||||||||||| |||| | |||||||||||    
T  26027935 aatccttaaaatggacaaatgatgtcatcttttcaataattttaataatatgtattactcaaatgaaatcgttcagggagtttcatata 26027847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 15552214 - 15552163
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  15552214 atcaagtgacatcacaatcattctattacataatcaattagatttgtccata 15552163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 16498796 - 16498729
Alignment:
Q  290 ccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||  | | ||||||||||||||    
T  16498796 ccaagtcattgtatctctctataaatagagctcatatgtaacctaattgcataccacaagagaataat 16498729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 357
Target Start/End: Complemental strand, 3343955 - 3343878
Alignment:
Q  280 tgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||| || ||||||||||||||||||| |||||||||| || ||||||||| |||||||| || |||||| ||||||    
T  3343955 tgcttccttcccaagtcattgtatttctatataaatagaacttatatgtaacctaattatatataacaagaaaataat 3343878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 17721111 - 17721019
Alignment:
Q  33 tgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||     |||||||||||| ||  |||||||||||||  |||||||||||    
T  17721111 tgacatctcaatcattctagtatataatcaattaaatttgtccatgttagcatttatataacgaatgttagaatctcttcgtgagttctaata 17721019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 22577143 - 22577231
Alignment:
Q  155 atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatataa 243  Q
    ||||||||||||||||||||||||||||| | |||||| |||||| ||| || | |  |||||||||||||| | | | ||||||||||    
T  22577143 atccttaaaatggacaaatgatgtcatctcttcaatagttttgattgtatgtcttatgcaaatgaaatcctttagggactttcatataa 22577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 27420423 - 27420523
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaa 123  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||||||||||   ||||||||   |||||||| |||| || |||||| ||| ||||||    
T  27420423 atcaagtgacatcacaatcatcc-agtacatgatcaattagatttgtccatatcaacatttatagaataacaaattttaaaaactcttcgggatttctaa 27420521  T
Q  124 ta 125  Q
    ||    
T  27420522 ta 27420523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 16168178 - 16168081
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| ||||||||||||||||||| || |||||||  || |||||| || |   || ||||||||||||| ||||||||||||||| ||||| |||||    
T  16168178 atcaagtgacatcacaatcattctattatataatcatctaaatttgttca-atcgacctttatataacaaattttagaatctcttcaagagttataata 16168081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 9088672 - 9088715
Alignment:
Q  287 tccccaagtcattgtatttctctataaatagagctcatatgtaa 330  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||    
T  9088672 tccccaaatcattatatttctctataaatagagcttatatgtaa 9088715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 29644986 - 29645039
Alignment:
Q  295 tcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaa 348  Q
    |||||||| ||||||||||||| |  ||| ||||||| ||||||||||||||||    
T  29644986 tcattgtacttctctataaataaaaatcacatgtaacataattatacatcacaa 29645039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 13413 - 13658
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  13413 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaagtatttatataacaaaatttagaatctcttcaggagttctaatat 13512  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13513 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagcacgtttcactcaaatgaaatcctt 13612  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  13613 caagaagtttcatataatacaaataaattgtagcacattttcatat 13658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 1532490 - 1532735
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1532490 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 1532589  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  1532590 atatacgattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatattttcaatagatttgatagtacgtttccctcaaatgaaatcctt 1532689  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1532690 caagtagtttcatataatacaaataaattgtagcacattttcatat 1532735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 30958348 - 30958593
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30958348 atcaagtgacatcacaatcattctagtacataatcaattagatttttccataaaaacatttatataacaaaatttagaatctcttcaagagttctaatat 30958447  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30958448 atatacgattataacaaattcagttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 30958547  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30958548 caagtagtttcatataatacaaataaattgtagcacattttcatat 30958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 27 - 272
Target Start/End: Original strand, 28367807 - 28368051
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  28367807 atcaagtgacatcacaatcattatagtacataatcaattagatttgtccataaaaatatttatataacaaaatttagaatctcttcaggagttctaatat 28367906  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28367907 atataatattataacaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatg-aatcctt 28368005  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28368006 caagtagtttcatataatacaaataaattgtagcacattttcatat 28368051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 28367069 - 28366986
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28367069 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 28366986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 28375809 - 28375726
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28375809 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 28375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 30963260 - 30963179
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30963260 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacttaattatacatcacaagagaataat 30963179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 30927469 - 30927388
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  30927469 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacttaattatacatcacaaaagaataat 30927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 34648023 - 34647939
Alignment:
Q  273 tatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  34648023 tatattgtgcttgctccccaaatcattgtatttctgtataaattgagctcatatgtaacctaattgtacatcacaagagaataat 34647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 1536643 - 1536560
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||  ||||||||||||    
T  1536643 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattagagataccaagagaataat 1536560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 24214221 - 24214316
Alignment:
Q  133 gattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttc 227  Q
    ||||||||  |||||||||| ||||||||||||| ||||||||||||||||||| |||||   ||||||||| || | ||||||||||||||||||    
T  24214221 gattataacgaattcatttccaaatccttaaaatagacaaatgatgtcatcttttcaataatcttgatagtatgtattactcaaatgaaatccttc 24214316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 24214093 - 24214194
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaa 123  Q
    |||||| |||||| |||||||| ||||||||||| |||||||||||||||||    |||||||   |||||||| |||||||||||||||||| ||| ||    
T  24214093 atcaaaagacatcgcaatcattttagtacataattaattagatttgtccatattgccatttatatgataacaaattttagaatctcttcaggatttcaaa 24214192  T
Q  124 ta 125  Q
    ||    
T  24214193 ta 24214194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 17945197 - 17945095
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataaca----aaatttagaatctcttcaggagttcta 122  Q
    ||||| |||||||||||||||| || ||||||||||| ||||||||| ||||   || ||||||| |||    || ||||||||||||||||||||||||    
T  17945197 atcaagtgacatcacaatcattatattacataatcaactagatttgttcatattgacctttatatgacaaattaattttagaatctcttcaggagttcta 17945098  T
Q  123 ata 125  Q
    |||    
T  17945097 ata 17945095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 18080792 - 18080860
Alignment:
Q  135 ttataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagt 202  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |||||  |||||||||    
T  18080792 ttataagaaattcatttccatatctttaaaatggacaaatgatgtcatcttttcaataattttgatagt 18080860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 14664064 - 14664032
Alignment:
Q  291 caagtcattgtatttctctataaatagagctca 323  Q
    |||||||||||||||||||||||||||||||||    
T  14664064 caagtcattgtatttctctataaatagagctca 14664032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 23775275 - 23775335
Alignment:
Q  295 tcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaata 355  Q
    |||||||| |||||||||||||||| ||| ||||||  ||||| ||||||| |||||||||    
T  23775275 tcattgtacttctctataaatagagatcacatgtaagataattgtacatcagaagagaata 23775335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 23862229 - 23862289
Alignment:
Q  295 tcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaata 355  Q
    |||||||| |||||||||||||||| ||| ||||||  ||||| ||||||| |||||||||    
T  23862229 tcattgtacttctctataaatagagatcacatgtaagataattgtacatcagaagagaata 23862289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 17945068 - 17945002
Alignment:
Q  134 attataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgat 199  Q
    ||||||| ||||||||||| | || ||||||||| |||||||||||||||| | |||||| ||||||    
T  17945068 attataagaaattcatttccatattcttaaaatgaacaaatgatgtcatctcttcaatagttttgat 17945002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 54502 - 54442
Alignment:
Q  297 attgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||| ||||||||||| ||| |||||||  |||| |||| |||||| |||||||    
T  54502 attgtatttctatataaatagagttcacatgtaacacaattgtacaacacaagtgaataat 54442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 14851977 - 14851732
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaatat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14851977 atcaagtgacatcacaatcattctagtacataatcaattagatttgtccataaaaacatttatataacaaaatttagaatctcttcaggagttctaatat 14851878  T
Q  127 atatacgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatcctt 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  14851877 atatacgattataataaattcatttcaaatccttaaaatggacaaatgatgtcatctttctaatagatttgatattatgtttcactcaaatgaaatcctt 14851778  T
Q  227 caagtagtttcatataatacaaataaattgtagcacattttcatat 272  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14851777 caagtagtttcatataatacaaataaattgtagcacatttttatat 14851732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 14856008 - 14856091
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14856008 atattgtgcttgctccccacgtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 14856091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 26680643 - 26680723
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26680643 tattgtgcttgctccc-aagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 26680723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 14847150 - 14847233
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  14847150 atattgtgattgctccccacgtcattgtatttctctataaatagaactcatatgtaacctaattatacatcacaagagaataat 14847233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 6932377 - 6932151
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata- 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||  ||||  ||||||||||||||||||||||||||||||     
T  6932377 atcaaatgacatcacaatcattctagtacataatcaattagatttgttcatatcaacatttgaataa-gaaatttagaatctcttcaggagttctaataa 6932279  T
Q  126 -tat-ata----cgattat---aaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaa 215  Q
     ||| |||     ||||||   || ||||||||||||| ||||||||||||||||||||||||||  | | |||||| |||| | ||  || | || ||     
T  6932278 ttatcataaaattgattataacaacaaattcatttcaatatccttaaaatggacaaatgatgtcacatcttcaatagttttgtttgtgtgtcttacgcag 6932179  T
Q  216 atgaaatccttcaagtagtttcatataa 243  Q
    ||||||||||||| | ||||||||||||    
T  6932178 atgaaatccttcaggaagtttcatataa 6932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 19441910 - 19442148
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaa---tttagaatctcttcaggagttctaa 123  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| |||   |||||||||||| || |   |||||||| ||||||||| ||||||    
T  19441910 atcaagtgacatcacaatcattctattacataatcaattagatttgtctatatcaacatttatataataataaattttagaatatcttcaggatttctaa 19442009  T
Q  124 t-atat--------------ata----cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagta 203  Q
    | ||||              |||    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||  ||| ||||||    
T  19442010 tcatattttataccattatcataaaatcgattataacaaattcatttccaaatccttaaaatggacaaatgatgtcatcttttcaataattttcatagta 19442109  T
Q  204 cgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
     || | |  |||||||||||||||| | |||||||||||    
T  19442110 tgtattatgcaaatgaaatccttcagggagtttcatata 19442148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 17270903 - 17271001
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| |||||||||||||||| || ||||||||||| ||||||||| ||||   || ||||| ||||||| ||||||||||||||||||||| |||||    
T  17270903 atcaagtgacatcacaatcattatattacataatcaactagatttgttcatattaacgtttatgtaacaaattttagaatctcttcaggagttttaata 17271001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 25395066 - 25394828
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataa---caaaatttagaatctcttcaggagttctaa 123  Q
    ||||| |||||| |||| ||||||| |||||||||| |||||||||||||||   ||||||||||||   |||| |||||||||||||||||| ||||||    
T  25395066 atcaagtgacatgacaaacattctaatacataatcatttagatttgtccatatcaacatttatataataacaaattttagaatctcttcaggatttctaa 25394967  T
Q  124 ta------tatata-------------cgattataaaaaattcatttc-aaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagta 203  Q
    ||      |||||              |||||||||  |||| ||||| |||||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  25394966 taatattttatatcattatcataaaatcgattataacgaatttatttccaaatccttaaaatggacaaatgatatcatcttttcaataattttgatagta 25394867  T
Q  204 cgtttcactcaaatgaaatccttcaagtagtttcatata 242  Q
      | | |||||||||||||||||| || | |||||||||    
T  25394866 tatattactcaaatgaaatccttctaggaatttcatata 25394828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 17271028 - 17271138
Alignment:
Q  134 attataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagta 232  Q
    ||||||| ||||||||||| | || |||||||||||||||||||||||||| | |||||| |||||| ||| |  | || |||||||||||||||  | |    
T  17271028 attataagaaattcatttccatattcttaaaatggacaaatgatgtcatctcttcaatagttttgatggtatggcttacgcaaatgaaatccttcgggga 17271127  T
Q  233 gtttcatataa 243  Q
    |||||||||||    
T  17271128 gtttcatataa 17271138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 10345793 - 10345728
Alignment:
Q  291 caagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||| ||||||| ||||||||||| ||| |||||||||||||  ||| ||||||||||||||    
T  10345793 caagtcattctatttctatataaatagagttcacatgtaacttaatt-gacaacacaagagaataat 10345728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 19817350 - 19817400
Alignment:
Q  28 tcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    |||||||||||  ||||||||||||||||||||||  ||||||||||||||    
T  19817350 tcaaatgacattgcaatcattctagtacataatcacctagatttgtccata 19817400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 13466845 - 13466763
Alignment:
Q  277 ttgtgcttgctccccaagtcattgtatttctctataaat-agagctcatatgtaacttaattatac-atcacaagagaataat 357  Q
    ||||||||| |  |||||||||| ||||| ||||||||| ||| ||||||| |||||||||| ||  ||||||||||||||||    
T  13466845 ttgtgcttgttttccaagtcattatatttttctataaatgagatctcatatataacttaattgtatgatcacaagagaataat 13466763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 13462020 - 13461952
Alignment:
Q  291 caagtcattgtatttctctataaat-agagctcatatgtaacttaattata-catcacaagagaataat 357  Q
    ||||| |||||||||||||||||||  ||||||||||| ||| ||||| ||  ||||||||||||||||    
T  13462020 caagttattgtatttctctataaatgggagctcatatgaaacataattgtatgatcacaagagaataat 13461952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 12756250 - 12756167
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12756250 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 12756167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 24052122 - 24052039
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24052122 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataat 24052039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 41043551 - 41043631
Alignment:
Q  275 tattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaata 355  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41043551 tattgtgcttactccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaata 41043631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 8509319 - 8509083
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata- 125  Q
    ||||| ||||||||||||||||||| ||||||||||| |||| |||| ||||   |||||||||||||||| |||||||||||||| ||||||||||||     
T  8509319 atcaagtgacatcacaatcattctattacataatcaactagaattgttcatatcgacatttatataacaaattttagaatctcttccggagttctaataa 8509220  T
Q  126 --tatatac---------------gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
      | ||| |               |||||||| |||||||||| || |||||||||||||| |||||||||||||||| |||||  |||||||||| ||     
T  8509219 tttttattcgattatcataaaatagattataagaaattcatttccatatccttaaaatggataaatgatgtcatcttttcaataattttgatagtatgtc 8509120  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatataat 244  Q
    | || |||||||||||||||| | |||||||||||||    
T  8509119 ttacacaaatgaaatccttcagggagtttcatataat 8509083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 10738323 - 10738089
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataa---caaaatttagaatctcttcaggagttctaa 123  Q
    ||||| |||||| |||||||||||| || |||||||||||||||||||||||   ||||||||||||   |||| |||||||| ||||||||| ||||||    
T  10738323 atcaagtgacatgacaatcattctaatatataatcaattagatttgtccatatcaacatttatataataacaaattttagaatatcttcaggatttctaa 10738224  T
Q  124 tatat------------ata----cgattataaaaaattcatttcaaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
    ||| |            |||    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||  |     
T  10738223 tattttatactattatcataaaatcgattataataaattcatttcaaatccttaaaatggacaaatgatgtcatcttttcaataattttaatagtatata 10738124  T
Q  208 tcactcaaatgaaatccttcaagtagtttcatata 242  Q
    | || ||||||||| |||||| | |||||||||||    
T  10738123 ttacgcaaatgaaacccttcagggagtttcatata 10738089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 41048932 - 41049005
Alignment:
Q  283 ttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 356  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  41048932 ttgctccccaagtcattgtatttatttataaatagagctcatatgtaacctaattatacatcacaagataataa 41049005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 28349145 - 28349245
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaatta--gatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaat 124  Q
    ||||| ||||||||||||||||||| ||||||||||| ||  ||||||| ||||   || ||||||||||||| ||||||||||| ||||||||||||||    
T  28349145 atcaagtgacatcacaatcattctattacataatcaaatatagatttgttcatatcgacctttatataacaaattttagaatctcatcaggagttctaat 28349244  T
Q  125 a 125  Q
    |    
T  28349245 a 28349245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 17909189 - 17909087
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataaca----aaatttagaatctcttcaggagttcta 122  Q
    ||||| |||||||||||||||| || ||||||||||| ||||||||| ||||   || ||||||| |||    || ||||||||||||||||||||||||    
T  17909189 atcaagtgacatcacaatcattatattacataatcaactagatttgttcatattgacctttatatgacaaattaattttagaatctcttcaggagttcta 17909090  T
Q  123 ata 125  Q
    |||    
T  17909089 ata 17909087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 16846527 - 16846578
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccata 78  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  16846527 atcaagtgacatcacaatcattctagcacataatcaattagatttgttcata 16846578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 17909060 - 17908966
Alignment:
Q  134 attataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttc 227  Q
    ||||||| ||||||||||| | || ||||||||||||||||||||  |||| | |||||| |||||| ||| || | || |||||||||||||||    
T  17909060 attataagaaattcatttccatattcttaaaatggacaaatgatgctatctcttcaatagttttgattgtatgtcttacgcaaatgaaatccttc 17908966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 16846601 - 16846644
Alignment:
Q  82 acatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||    
T  16846601 acatttatatagcaaattttagaatctcttcagaagttctaata 16846644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 23428485 - 23428442
Alignment:
Q  159 ttaaaatggacaaatgatgtcatctttccaatagatttgatagt 202  Q
    ||||||||||||||||||||||||||| |||||  |||||||||    
T  23428485 ttaaaatggacaaatgatgtcatcttttcaataattttgatagt 23428442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 23428606 - 23428539
Alignment:
Q  58 aatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    |||||| ||||||||| ||||   || ||||||||||||| ||||||||||| ||||| |||||||||    
T  23428606 aatcaactagatttgttcatatcgacctttatataacaaattttagaatctcatcaggtgttctaata 23428539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 28349280 - 28349367
Alignment:
Q  142 aaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttca 228  Q
    |||||||||| || |||||||||||||||||||||| ||||||||  ||||  |||||||||| || | ||  | |||||||||||||    
T  28349280 aaattcattttcatatccttaaaatggacaaatgatatcatctttttaataactttgatagtatgtcttacgtatatgaaatccttca 28349367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 331
Target Start/End: Complemental strand, 24042924 - 24042894
Alignment:
Q  301 tatttctctataaatagagctcatatgtaac 331  Q
    |||||||||||||||||||||||||||||||    
T  24042924 tatttctctataaatagagctcatatgtaac 24042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 16846679 - 16846742
Alignment:
Q  142 aaattcatttc-aaatccttaaaatggac--aaatgatgtcatctttccaatagatttgatagt 202  Q
    ||||||||||| |||||||||||||||||  |||||||||||| | | |||||| |||||||||    
T  16846679 aaattcatttctaaatccttaaaatggacaaaaatgatgtcatgtcttcaatagttttgatagt 16846742  T

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Target: scaffold0211 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 26975 - 27058
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| | |||||||||||    
T  26975 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacataataaaacataaaaagagaataat 27058  T

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Target: scaffold0169 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 11029 - 11092
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaatt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  11029 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatataacctaatt 11092  T

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Target: scaffold0169; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 8767 - 8823
Alignment:
Q  274 atattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaa 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  8767 atattgtgcttgctccccaagtcattgtatttctctataaatagagattatatgtaa 8823  T

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Target: scaffold0121 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 11509 - 11431
Alignment:
Q  279 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   |||||||||||    
T  11509 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatggtacatactaagagaataat 11431  T

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Target: scaffold0066 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 11256 - 11167
Alignment:
Q  40 acaatcattctagtacataatcaattagatttgtccataaacacatttat---ataacaaaatttagaatctcttcaggagttctaatat 126  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||   |||||||| |||| ||||||||||||| |||||||||    
T  11256 acaatcattctagtacataatcaattagatttgtccatatcaacatttatataataacaaattttataatctcttcaggatttctaatat 11167  T

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Target: scaffold0066; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 11130 - 11030
Alignment:
Q  143 aattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagtagtttcatat 241  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||  ||||||||||  | | || |||||||||||||| | | ||||||||||    
T  11130 aattcattttcaaatccttaaaatggataaatgatgtcatcttttcaataattttgatagtatatattacacaaatgaaatcctttagggagtttcatat 11031  T
Q  242 a 242  Q
    |    
T  11030 a 11030  T

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Target: scaffold0124 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 39540 - 39618
Alignment:
Q  279 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataat 357  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||   |||||||||||    
T  39540 gtgcttgctcctcaagtcattgtatttctctataaatagagctcatatgtaacctaatggtacatactaagagaataat 39618  T

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Target: scaffold0062 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 39441 - 39343
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttctaata 125  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| ||||   |  ||||||||||||| ||||||||||| ||| |||||||||||    
T  39441 atcaagtgacatcacaatcattctattacataatcaattatatttgttcatatcaatctttatataacaaattttagaatctcatcatgagttctaata 39343  T

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Target: scaffold0062; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 19284 - 19064
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttct---aa 123  Q
    ||||| |||||||| |||||||||| |||||||||||||  |||||| ||||   |  ||||||||||||| ||||||||||| |||||||||||   ||    
T  19284 atcaagtgacatcaaaatcattctattacataatcaattgaatttgttcatatcaatctttatataacaaattttagaatctcatcaggagttctaataa 19185  T
Q  124 tatatatac---------------gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
    ||| | |||               ||||||||||||||||||| || ||||||||| ||||||||||||||||||||  |||||  |||||||||| ||     
T  19184 tatttctacgattatcataaaattgattataaaaaattcatttccatatccttaaactggacaaatgatgtcatcttgtcaataactttgatagtatgtc 19085  T
Q  208 tcactcaaatgaaatccttca 228  Q
    | || ||||||||||||||||    
T  19084 ttacgcaaatgaaatccttca 19064  T

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Target: scaffold0062; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 29452 - 29232
Alignment:
Q  27 atcaaatgacatcacaatcattctagtacataatcaattagatttgtccataaacacatttatataacaaaatttagaatctcttcaggagttct---aa 123  Q
    ||||| |||||||| |||||||||| |||||||||||||  |||||| ||||   |  ||||||||||||| ||||||||||| |||||||||||   ||    
T  29452 atcaagtgacatcaaaatcattctattacataatcaattgaatttgttcatatcaatctttatataacaaattttagaatctcatcaggagttctaataa 29353  T
Q  124 tatatatac---------------gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtt 207  Q
    ||| | |||               ||||||||||||||||||| || ||||||||| ||||||||||||||||||||  |||||  |||||||||| ||     
T  29352 tatttctacgattatcataaaattgattataaaaaattcatttccatatccttaaactggacaaatgatgtcatcttgtcaataactttgatagtatgtc 29253  T
Q  208 tcactcaaatgaaatccttca 228  Q
    | || ||||||||||||||||    
T  29252 ttacgcaaatgaaatccttca 29232  T

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Target: scaffold0062; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 39317 - 39221
Alignment:
Q  133 gattataaaaaattcatttcaa-atccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttca 228  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||||||  |||||  |||||||||| || | || ||||||||||||||||    
T  39317 gattataaaaaattcatttccatatatttaaaatggacaaatgatgtcatcttgtcaataactttgatagtatgtcttacgcaaatgaaatccttca 39221  T

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Target: scaffold0020 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 122404 - 122294
Alignment:
Q  133 gattataaaaaattcattt-caaatccttaaaatggacaaatgatgtcatctttccaatagatttgatagtacgtttcactcaaatgaaatccttcaagt 231  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||||||||||||| |||||  |||||||||| || | ||  ||||||||||||| | |     
T  122404 gattataacaaattcattttcaaattcttaaaatggataaatgatgtcatcttttcaataattttgatagtatgtattacgtaaatgaaatcctttagga 122305  T
Q  232 agtttcatata 242  Q
    |||||||||||    
T  122304 agtttcatata 122294  T

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