View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9198_high_2 (Length: 477)

Name: NF9198_high_2
Description: NF9198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9198_high_2
NF9198_high_2
[»] chr4 (64 HSPs)
chr4 (70-462)||(10243713-10244106)
chr4 (15-275)||(10243613-10243873)
chr4 (61-300)||(10217649-10217888)
chr4 (15-275)||(10243493-10243753)
chr4 (121-279)||(10243539-10243697)
chr4 (55-260)||(10254414-10254619)
chr4 (67-257)||(10217595-10217785)
chr4 (67-200)||(10217235-10217368)
chr4 (330-462)||(10217936-10218071)
chr4 (55-246)||(10254384-10254575)
chr4 (55-242)||(10254474-10254661)
chr4 (67-200)||(10217145-10217278)
chr4 (67-200)||(10217325-10217458)
chr4 (46-179)||(10243779-10243912)
chr4 (58-194)||(10217706-10217842)
chr4 (64-272)||(10264716-10264924)
chr4 (15-230)||(10217648-10217863)
chr4 (58-272)||(10217556-10217770)
chr4 (22-182)||(10254171-10254331)
chr4 (22-230)||(10243695-10243918)
chr4 (85-242)||(10254099-10254256)
chr4 (70-260)||(10243443-10243633)
chr4 (56-242)||(10254130-10254316)
chr4 (55-177)||(10264827-10264949)
chr4 (130-279)||(10243428-10243577)
chr4 (65-182)||(10254589-10254706)
chr4 (55-275)||(10217103-10217323)
chr4 (58-266)||(10217466-10217674)
chr4 (67-201)||(10217415-10217549)
chr4 (65-246)||(10254454-10254635)
chr4 (61-197)||(10217079-10217215)
chr4 (118-230)||(10264620-10264732)
chr4 (61-197)||(10264803-10264939)
chr4 (67-214)||(10254366-10254513)
chr4 (55-182)||(10264767-10264894)
chr4 (55-181)||(10264617-10264743)
chr4 (67-279)||(10217505-10217717)
chr4 (85-209)||(10243428-10243552)
chr4 (15-99)||(10243838-10243922)
chr4 (61-212)||(10217289-10217440)
chr4 (58-197)||(10217346-10217485)
chr4 (22-204)||(10243740-10243922)
chr4 (22-99)||(10217790-10217867)
chr4 (190-257)||(10217283-10217350)
chr4 (58-200)||(10217256-10217398)
chr4 (193-275)||(10254477-10254559)
chr4 (70-200)||(10254534-10254664)
chr4 (65-227)||(10264957-10265119)
chr4 (55-152)||(10265157-10265254)
chr4 (61-197)||(10217379-10217515)
chr4 (52-140)||(10254096-10254184)
chr4 (67-279)||(10254306-10254518)
chr4 (58-134)||(10254612-10254688)
chr4 (55-179)||(10265067-10265191)
chr4 (58-197)||(10254327-10254466)
chr4 (190-260)||(10264647-10264717)
chr4 (61-199)||(10264923-10265061)
chr4 (67-200)||(10217055-10217188)
chr4 (171-236)||(10243349-10243414)
chr4 (82-179)||(10265124-10265221)
chr4 (190-242)||(10217373-10217425)
chr4 (200-276)||(10254454-10254530)
chr4 (66-242)||(10254515-10254691)
chr4 (68-152)||(10265140-10265224)


Alignment Details
Target: chr4 (Bit Score: 354; Significance: 0; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 70 - 462
Target Start/End: Original strand, 10243713 - 10244106
Alignment:
Q  70 aagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccag 169  Q
    |||||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10243713 aagccacctgtttacaagcccccagtctacaagccaccagtagtgaagccacctgtatacaagcctccagtctacaagccacccgtttacaagcctccag 10243812  T
Q  170 ttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagcc 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243813 ttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagcc 10243912  T
Q  270 accagtttacggacctcctcaccacccataggactctcggatgtttttaagtaaataagttaaataagagata-ataaagtttccaaagcaaggattata 368  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  10243913 accagtttacggacctcctcaccacccataggactctcggatgcttttaagtaaataagttaaataagagatatataatgtttccaaagcaaggattata 10244012  T
Q  369 tattcttggaatcttcattttagtcttttgtttacaaatcctattaccaagataagaatgtgaaagaaaatggtgcatttgtactccaagttat 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10244013 tattcttggaatcttcattttagtcttttgtttacaaatcctattaccaagataagaatgtgaaagaaaatggtgcatttgtactccaagttat 10244106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 10243613 - 10243873
Alignment:
Q  15 acctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtg 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243613 acctgtatacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtg 10243712  T
Q  115 aagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccag 214  Q
    |||||||||||||||||||| ||||||||||||||||| ||    ||||| || ||  | |||||||| |||||||||||||| ||||||||||| ||||    
T  10243713 aagccacctgtttacaagcccccagtctacaagccaccagtagtgaagccacctgtatacaagcctccagtctacaagccacccgtttacaagcctccag 10243812  T
Q  215 ttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagt 275  Q
    ||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || |||||    
T  10243813 ttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagt 10243873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 61 - 300
Target Start/End: Original strand, 10217649 - 10217888
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    ||||| |||||||| ||||| ||||| || || || ||||| || || |||| |||||| || ||||||||||| || || ||||| || || |||||||    
T  10217649 cctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttaca 10217748  T
Q  161 agcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagt 260  Q
    |||| ||||| |||||||| || || |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10217749 agccaccagtagagaagccacctgtgtacaagcctccggtctacaaacccccagttgagaaacctccagtttacaagccaccggtttacaagcctccagt 10217848  T
Q  261 cgagaagccaccagtttacggacctcctcaccacccatag 300  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10217849 cgagaagccaccagtttacggaccacctcaccacccatag 10217888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 10243493 - 10243753
Alignment:
Q  15 acctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||| ||||||||||| |||||||||| |    
T  10243493 acctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagag 10243592  T
Q  115 aagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccag 214  Q
    ||||| || ||||||||||| || || ||||| || || ||    || || |||||  | || ||||| || ||||||||||| ||| | ||||| ||||    
T  10243593 aagcccccagtttacaagccacctgtatacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccag 10243692  T
Q  215 ttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagt 275  Q
    || | || || |||||    |||||||| ||||||||||| |||||| | |||||||||||    
T  10243693 tttacaagccaccagtagtgaagccacctgtttacaagcccccagtctacaagccaccagt 10243753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 10243539 - 10243697
Alignment:
Q  121 cctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgaga 220  Q
    |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||||| || || |||||||||||||| ||||| |||||||| | ||    
T  10243539 cctgtttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagagaagcccccagtttacaagccacctgtatacaaacccccagtagtga 10243638  T
Q  221 aacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagtttac 279  Q
    |||| ||||||||||| || || ||||||||||| ||||| |||||||| |||||||||    
T  10243639 aacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttac 10243697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 10254414 - 10254619
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    ||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||| |||||||| |||||  | ||||| || |    
T  10254414 aaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccag 10254513  T
Q  155 tttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcc 254  Q
     ||||||||| |||||||||||||| || ||  | || ||||| || |||||||| || |||||||| || ||| | ||||| ||||| ||| | |||||    
T  10254514 cttacaagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcc 10254613  T
Q  255 tccagt 260  Q
    ||||||    
T  10254614 tccagt 10254619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 10217595 - 10217785
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||| |||||||| |||||| | || || || || ||||| ||||    
T  10217595 tacaagccacctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgtacaagcccccagtcgagaaacccccggtctacaaacctc 10217694  T
Q  167 cagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctcc 257  Q
    | || ||||||||||| || ||||||||||| || ||||| || |||||| | || || |||||  | |||||||| || |||||||||||    
T  10217695 ctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttacaagccaccagtagagaagccacctgtgtacaagcctcc 10217785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 10217235 - 10217368
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||||||||||||||| |||||||| || ||||| ||||| |||| ||||||||||||||||||||| || ||  | || ||||| || |||||||| |    
T  10217235 tacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaaccaccagtgtacaagccac 10217334  T
Q  167 cagttgagaagcctccggtctacaagccacctgt 200  Q
    ||||||||||||||||||||||||| ||||||||    
T  10217335 cagttgagaagcctccggtctacaaaccacctgt 10217368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 330 - 462
Target Start/End: Original strand, 10217936 - 10218071
Alignment:
Q  330 taaataagagata-ataaagtttccaaagcaaggattatatattcttggaa-tcttcattttagtcttttgtttacaaatcctattaccaagataagaat 427  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||||| |||||| || | |||| ||||||||||| ||||| |||||| |||| |    
T  10217936 taaataagagatatataaactttccaaagcaaggatcatatattcttggaaatcttcaattcaatcttatgtttacaaatgctattgccaagacaagagt 10218035  T
Q  428 gtgaaagaaaatggtg-catttgtactccaagttat 462  Q
    |||||||||||||||| |||||||||| ||| ||||    
T  10218036 gtgaaagaaaatggtgccatttgtacttcaaattat 10218071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 55 - 246
Target Start/End: Original strand, 10254384 - 10254575
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    ||||| || ||||| ||||||||||| ||||| || || || |||||||||||||| | |||||| ||  |||||||||| |||||  | || ||||| |    
T  10254384 aaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctg 10254483  T
Q  155 tttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtt 246  Q
    | |||||||| ||||||||||||||||| |  ||||||||||| ||| | ||||| || || |||||||| ||||| |||||||||||||||    
T  10254484 tatacaagccaccagttgagaagcctccagcttacaagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccaccggtt 10254575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 10254474 - 10254661
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||  | || || ||||| ||||||||||| |    
T  10254474 aaaccacctgtatacaagccaccagttgagaagcctccagcttacaagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccaccgg 10254573  T
Q  155 tttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 242  Q
    || | ||||| ||| || | || || || ||  | ||||| || || |||||||| || ||||||||||| || ||||||||||||||    
T  10254574 ttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgagaaaccacctgtctacaagccacc 10254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 10217145 - 10217278
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||||||||||||||||||||| || || ||||| || || |||| |||||| |||||||||||||| |||||  | || ||||| || |||||||| |    
T  10217145 tacaagccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctgtttacaagccaccagtagagaaaccaccagtgtacaagccac 10217244  T
Q  167 cagttgagaagcctccggtctacaagccacctgt 200  Q
    ||||||| ||||||||||||||||| ||||||||    
T  10217245 cagttgaaaagcctccggtctacaaaccacctgt 10217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 10217325 - 10217458
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||| ||||||||||||||| ||||| || ||  | || ||||| || |||||||| |    
T  10217325 tacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaaccaccagtgtacaagccac 10217424  T
Q  167 cagttgagaagcctccggtctacaagccacctgt 200  Q
    ||||||||||||| ||||||||||| || |||||    
T  10217425 cagttgagaagcccccggtctacaaaccccctgt 10217458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 10243779 - 10243912
Alignment:
Q  46 ccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctaca 145  Q
    ||||||||||| || || ||||||||||| ||||||||||||||||| || ||||||||||| ||    ||||| || ||| | || |||||||||||||    
T  10243779 ccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctaca 10243878  T
Q  146 agccacccgtttacaagcctccagttgagaagcc 179  Q
    ||||||| ||||||||||||||||| ||||||||    
T  10243879 agccaccggtttacaagcctccagtcgagaagcc 10243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 10217706 - 10217842
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    ||||| |||||||||||||| ||  | || ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| || || |||     
T  10217706 cctccagtttacaagccaccggtgtacaaacctccagtttacaagccaccagtagagaagccacctgtgtacaagcctccggtctacaaacccccagttg 10217805  T
Q  158 acaagcctccagttgagaagcctccggtctacaagcc 194  Q
    | || ||||||||| | ||||| ||||| ||||||||    
T  10217806 agaaacctccagtttacaagccaccggtttacaagcc 10217842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 64 - 272
Target Start/End: Original strand, 10264716 - 10264924
Alignment:
Q  64 gtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagc 163  Q
    |||||||| || ||||| |||||||||| |||  ||||||||||||| |  || ||||||||  ||||||| |||||  | |||| ||| ||||||||||    
T  10264716 gtttacaaacctccagtagagaagcctctagtgcacaagccaccagttgataaaccacctgtacacaagccaccagttgagaagctacctgtttacaagc 10264815  T
Q  164 ctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcga 263  Q
    | || || ||||| |||||||| ||||||||||| ||| | |||||||||||| | |||||||||||  | ||||| || ||| |||| |||| ||| ||    
T  10264816 cacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccagttcacaaacctccagtagagaagcctccagttcacaaacctcaagtgga 10264915  T
Q  264 gaagccacc 272  Q
    |||||||||    
T  10264916 gaagccacc 10264924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 10217648 - 10217863
Alignment:
Q  15 acctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtg 114  Q
    |||||||||||| |||||||| | ||||||||| |||||||||||||||||  | ||||| |||||| | ||||| || || ||||| || |||||        
T  10217648 acctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttac 10217747  T
Q  115 aagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccag 214  Q
    |||||||| ||  | ||||| || || |||||||| || || ||||| || ||||||||||| ||||| || ||||||||||| ||||||||||| ||||    
T  10217748 aagccaccagtagagaagccacctgtgtacaagcctccggtctacaaacccccagttgagaaacctccagtttacaagccaccggtttacaagcctccag 10217847  T
Q  215 ttgagaaacctccagt 230  Q
    | ||||| || |||||    
T  10217848 tcgagaagccaccagt 10217863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 58 - 272
Target Start/End: Original strand, 10217556 - 10217770
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    |||||| | |||||||||||||| ||||| || ||||| ||||||||||| || | |||||| || ||||| ||||| |||||  | |||||||| || |    
T  10217556 cctcctatctacaagccaccagtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgt 10217655  T
Q  158 acaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctcc 257  Q
    ||||||| ||||| ||||| || ||||||||||| || |||||  | ||||| |||||| | || || || || ||||| || || ||||||||||| ||    
T  10217656 acaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttacaagccacc 10217755  T
Q  258 agtcgagaagccacc 272  Q
    ||| |||||||||||    
T  10217756 agtagagaagccacc 10217770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 10254171 - 10254331
Alignment:
Q  22 tacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccac 121  Q
    ||||| || ||||||| |||||| || || ||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||  |||||||    
T  10254171 tacaagccaccagtagagaaacctcctgtttaccaacctcctgtttacaagcccccagttgagaaacctccagtgtacaagccacctgtagaaaagccac 10254270  T
Q  122 ctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctcc 182  Q
    | || |||||||| || ||  | |||||||| || |||||||| || || || ||||||||    
T  10254271 cagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagcctcc 10254331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 10243695 - 10243918
Alignment:
Q  22 tacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccac 121  Q
    ||||| || ||||||||||| || || || ||||| || || || |||||||||||||| | |||||| || || |||||||| |||||    |||||||    
T  10243695 tacaagccaccagtagtgaagccacctgtttacaagcccccagtctacaagccaccagtagtgaagccacctgtatacaagcctccagtctacaagccac 10243794  T
Q  122 ctgtttacaagcctcca---------------gtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaa 206  Q
    | |||||||||||||||               |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  10243795 ccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaa 10243894  T
Q  207 gcccccagttgagaaacctccagt 230  Q
    ||| ||||| ||||| || |||||    
T  10243895 gcctccagtcgagaagccaccagt 10243918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 10254099 - 10254256
Alignment:
Q  85 aagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccgg 184  Q
    |||||||| || ||||| |||||||||| | | || || || || ||||| |||||  | ||||| ||  |||||||||| ||||| ||||| ||||| |    
T  10254099 aagcctcctgtatacaaaccaccagtagagcaacctcccgtctataagccaccagtagagaagcctccaatttacaagccaccagtagagaaacctcctg 10254198  T
Q  185 tctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 242  Q
    | ||| | || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  10254199 tttaccaacctcctgtttacaagcccccagttgagaaacctccagtgtacaagccacc 10254256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 70 - 260
Target Start/End: Original strand, 10243443 - 10243633
Alignment:
Q  70 aagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccag 169  Q
    ||||||||||| |||||||||||||||||||| ||||| ||    ||||||||||| ||||| || |||||    || || || || ||||| ||||| |    
T  10243443 aagccaccagtagagaagcctccagtttacaaaccaccggtgtacaagccacctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctg 10243542  T
Q  170 ttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagt 260  Q
    || | ||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||||| ||||||||||| || ||||| || |||||    
T  10243543 tttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagagaagcccccagtttacaagccacctgtatacaaacccccagt 10243633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 10254130 - 10254316
Alignment:
Q  56 aacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgt 155  Q
    ||||||| || || ||||||||||| |||||||||||| |||||||||||||||||| ||| || ||||||||| | ||||| || |||||||| || ||    
T  10254130 aacctcccgtctataagccaccagtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaacctcctgtttacaagcccccagt 10254229  T
Q  156 ttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 242  Q
    | | || ||||||||  | ||||| || ||  | |||||||| || |||||||| || || || || || ||||| |||||||||||    
T  10254230 tgagaaacctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacc 10254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 10264827 - 10264949
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    |||||||| || ||||||||||||||||||||||| |||||| |||| || ||||||| |||||| || ||| |||| |||| |||  | |||||||| |    
T  10264827 aaacctccggtgtacaagccaccagttgagaagcccccagttcacaaacctccagtagagaagcctccagttcacaaacctcaagtggagaagccacctg 10264926  T
Q  155 tttacaagcctccagttgagaag 177  Q
    | |||||||| ||||||||||||    
T  10264927 tatacaagccaccagttgagaag 10264949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 279
Target Start/End: Original strand, 10243428 - 10243577
Alignment:
Q  130 aagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccag 229  Q
    ||||| ||||| || |||||||| ||  | |||||||||||| | || || ||||| |||||||||||||| ||||| |||||||| | |||||| ||||    
T  10243428 aagccaccagtatataagccaccagtagagaagcctccagtttacaaaccaccggtgtacaagccacctgtgtacaaacccccagtagtgaaacccccag 10243527  T
Q  230 tctacaagccaccggtttacaagcctccagtcgagaagccaccagtttac 279  Q
    ||||||| || || ||||||||||| || ||  | |||||||||||||||    
T  10243528 tctacaaacctcctgtttacaagccaccggtgtacaagccaccagtttac 10243577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 10254589 - 10254706
Alignment:
Q  65 tttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcc 164  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| || | ||| |||||||| |||||||| || ||  | || ||||| |||||||||||    
T  10254589 tttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgagaaaccacctgtctacaagccacctgtagaaaatccacctgtttacaagcc 10254688  T
Q  165 tccagttgagaagcctcc 182  Q
     ||| ||||||| |||||    
T  10254689 accatttgagaaacctcc 10254706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 10217103 - 10217323
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    |||||||| |||||||| ||||| || ||||| || ||||| |||||||||||||| | |||||| || || ||||| ||||| ||  | ||||| || |    
T  10217103 aaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctg 10217202  T
Q  155 tttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcc 254  Q
    |||||||||| ||||| ||||| || || || ||||||||||| ||| | ||||| || ||  | ||||| || ||  | |||||||| |||||||||||    
T  10217203 tttacaagccaccagtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagcc 10217302  T
Q  255 tccagtcgagaagccaccagt 275  Q
     || || ||||| ||||||||    
T  10217303 acctgtagagaaaccaccagt 10217323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 10217466 - 10217674
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    |||||||| |||||||||||||| ||||| || ||||| |||||||||||||| | ||| || || || ||||| || || ||  | ||||| ||  | |    
T  10217466 cctcctgtctacaagccaccagtagagaaaccgccagtgtacaagccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatct 10217565  T
Q  158 acaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctcc 257  Q
    ||||||| ||||| ||||| || || || ||||||||||||||| | ||||| |||||| | || || |||||  | |||||||| || |||||||| ||    
T  10217566 acaagccaccagtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgtacaagccccc 10217665  T
Q  258 agtcgagaa 266  Q
    |||||||||    
T  10217666 agtcgagaa 10217674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 201
Target Start/End: Original strand, 10217415 - 10217549
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||||||||||||||||||||| || || ||||| || || |||| |||||| ||||| |||||||| |||||  | || || || || |||||||| |    
T  10217415 tacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaagccaccagtagagaaaccgccagtgtacaagccac 10217514  T
Q  167 cagttgagaagcctccggtctacaagccacctgtt 201  Q
    |||||||||| || ||||||||||| || ||||||    
T  10217515 cagttgagaaacccccggtctacaaaccccctgtt 10217549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 10254454 - 10254635
Alignment:
Q  65 tttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcc 164  Q
    |||||||||||||||| ||||| || || || |||||||||||||| | |||||| || | ||||||||| |||||  | |||||||| ||  | || ||    
T  10254454 tttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccagcttacaagccaccagttgagaagccacctgtagagaaacc 10254553  T
Q  165 tccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtt 246  Q
     |||||  | ||||| |||||  | ||||| ||  ||||||| || ||||||||||| |||||||| |||||||||||||||    
T  10254554 accagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggtt 10254635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 10217079 - 10217215
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    ||||| || |||||||| || || || |||||||||||||| ||||| |||| ||| ||||| || |||||||| |||||  | ||||| ||||| ||||    
T  10217079 cctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctaca 10217178  T
Q  161 agcctccagttgagaagcctccggtctacaagccacc 197  Q
    | ||||| || ||||||||||| || |||||||||||    
T  10217179 aacctcctgtagagaagcctcctgtttacaagccacc 10217215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 10264620 - 10264732
Alignment:
Q  118 ccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttg 217  Q
    ||||||||  ||||||| |||||  | |||| ||| ||||||||||| || || ||||| |||||||| ||||||||||||||| | ||||||||||||     
T  10264620 ccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagttt 10264719  T
Q  218 agaaacctccagt 230  Q
    | |||||||||||    
T  10264720 acaaacctccagt 10264732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 10264803 - 10264939
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    ||||||||||||||||| || ||||| ||||| || |||||||||||||| | |||||| || ||| |||| ||||||||  | ||||| || ||| |||    
T  10264803 cctgtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccagttcacaaacctccagtagagaagcctccagttcaca 10264902  T
Q  161 agcctccagttgagaagcctccggtctacaagccacc 197  Q
    | |||| ||| |||||||| || || |||||||||||    
T  10264903 aacctcaagtggagaagccacctgtatacaagccacc 10264939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 10254366 - 10254513
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||| ||||| |||||||| || || ||||| ||||||||||||| ||| |||||||| |||||||| |||||  | ||||| ||  |||||||||| |    
T  10254366 tacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccac 10254465  T
Q  167 cagttgagaagcctccggtctacaagccacctgtttacaagcccccag 214  Q
    |||| ||||| || || || ||||||||||| ||| | ||||| ||||    
T  10254466 cagtagagaaaccacctgtatacaagccaccagttgagaagcctccag 10254513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 10264767 - 10264894
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    ||||| |||||  |||||||||||||||||||||  || |||||||||||||| |||| ||| || || || |||||||| |||||  | ||||| || |    
T  10264767 aaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccag 10264866  T
Q  155 tttacaagcctccagttgagaagcctcc 182  Q
    || |||| |||||||| |||||||||||    
T  10264867 ttcacaaacctccagtagagaagcctcc 10264894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 10264617 - 10264743
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    ||||| |||||  |||||||||||||||||||||  || |||||||||||||| |||| ||| || || || |||||||| || ||  | ||||| || |    
T  10264617 aaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccag 10264716  T
Q  155 tttacaagcctccagttgagaagcctc 181  Q
    ||||||| |||||||| ||||||||||    
T  10264717 tttacaaacctccagtagagaagcctc 10264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 279
Target Start/End: Original strand, 10217505 - 10217717
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    |||||||||||||||||||| || || || ||||| || || || | |||||| ||| | |||||||| |||||  | || ||||| || |||||||| |    
T  10217505 tacaagccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatctacaagccaccagtagagaaaccaccagtgtacaagccac 10217604  T
Q  167 cagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaa 266  Q
    | |||||||||||||| || || |||||||| ||| | ||||| || ||  | || || |||||| | || || ||||| ||||| ||||| || |||||    
T  10217605 ctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaa 10217704  T
Q  267 gccaccagtttac 279  Q
    ||| |||||||||    
T  10217705 gcctccagtttac 10217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 10243428 - 10243552
Alignment:
Q  85 aagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccgg 184  Q
    ||||| ||||| || ||||||||||||| |||||| || |||||||| || || || ||||||||||| || ||||| || ||||| | ||| || || |    
T  10243428 aagccaccagtatataagccaccagtagagaagcctccagtttacaaaccaccggtgtacaagccacctgtgtacaaacccccagtagtgaaacccccag 10243527  T
Q  185 tctacaagccacctgtttacaagcc 209  Q
    ||||||| || ||||||||||||||    
T  10243528 tctacaaacctcctgtttacaagcc 10243552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 10243838 - 10243922
Alignment:
Q  15 acctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttac 99  Q
    |||||| ||||| |||||||| | |||||| ||||||||||| || || ||||||||||| ||||| |||||||| |||||||||    
T  10243838 acctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagtttac 10243922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 10217289 - 10217440
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    ||||||||||||||||| || ||||| || ||||| |||||||||||||| | |||||| || || ||||| || || ||  | |||||||| ||||| |    
T  10217289 cctgtttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgtttata 10217388  T
Q  161 agcctccagttgagaagcctccggtctacaagccacctgtttacaagccccc 212  Q
    |||| || || ||||| || || || ||||||||||| ||| | ||||||||    
T  10217389 agccacctgtagagaaaccaccagtgtacaagccaccagttgagaagccccc 10217440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 10217346 - 10217485
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    ||||| || ||||| ||||| || |||||||| || ||||| |||||||| |||| ||| ||||| || |||||||| |||||  | ||||| || || |    
T  10217346 cctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcccccggtct 10217445  T
Q  158 acaagcctccagttgagaagcctccggtctacaagccacc 197  Q
    |||| || || || ||||||||||| ||||||||||||||    
T  10217446 acaaaccccctgtagagaagcctcctgtctacaagccacc 10217485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 10243740 - 10243922
Alignment:
Q  22 tacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccac 121  Q
    ||||| || ||||||||||| || || || ||||| ||||| || ||||||||||| ||| | |||||||||||| | ||||| || ||    |||||||    
T  10243740 tacaagccaccagtagtgaagccacctgtatacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccac 10243839  T
Q  122 ctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgtttac 204  Q
    ||||||||||||| |||||  | || || || || |||||||| || ||| | |||||||| ||| | |||||||| ||||||    
T  10243840 ctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagtttac 10243922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10217790 - 10217867
Alignment:
Q  22 tacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttac 99  Q
    |||||||||||||| | |||||| ||||| ||||| || || ||||||||||| ||||| |||||||| |||||||||    
T  10217790 tacaaacccccagttgagaaacctccagtttacaagccaccggtttacaagcctccagtcgagaagccaccagtttac 10217867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 10217283 - 10217350
Alignment:
Q  190 aagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctcc 257  Q
    |||||||||||||||||||| || || |||||||| ||||| ||||||||||| ||| | ||||||||    
T  10217283 aagccacctgtttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctcc 10217350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 10217256 - 10217398
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    ||||| || ||||| ||||| || |||||||| || |||||||||||||| |||| ||| ||||| || |||||||| |||||  | ||||| || || |    
T  10217256 cctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtct 10217355  T
Q  158 acaagcctccagttgagaagcctccggtctacaagccacctgt 200  Q
    |||| || || || |||||||| || || || |||||||||||    
T  10217356 acaaaccacctgtagagaagccacctgtttataagccacctgt 10217398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 10254477 - 10254559
Alignment:
Q  193 ccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagt 275  Q
    |||||||| |||||||| ||||||||||| |||||||  ||||||||||| ||| | ||||| || || ||||| ||||||||    
T  10254477 ccacctgtatacaagccaccagttgagaagcctccagcttacaagccaccagttgagaagccacctgtagagaaaccaccagt 10254559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 10254534 - 10254664
Alignment:
Q  70 aagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccag 169  Q
    |||||||| || ||||| || ||||| ||||||||||| || | |||||| ||  ||||||| || |||||  | ||||| || || |||||||| || |    
T  10254534 aagccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccgg 10254633  T
Q  170 ttgagaagcctccggtctacaagccacctgt 200  Q
    ||||||| || || |||||||||||||||||    
T  10254634 ttgagaaaccacctgtctacaagccacctgt 10254664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 10264957 - 10265119
Alignment:
Q  65 tttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcc 164  Q
    ||||||| || | ||| ||||||||||||||  ||||||||| ||| | ||| ||||||||  ||||||| |||||  | |||| |||  ||||||||||    
T  10264957 tttacaaacctctagtagagaagcctccagtgcacaagccacgagttgagaaaccacctgtacacaagccaccagttgagaagctacctttttacaagcc 10265056  T
Q  165 tccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctcc 227  Q
     || |   |||| |||||||| ||||||||||| ||| | ||| |||||||| | ||||||||    
T  10265057 acctgcaaagaaacctccggtgtacaagccaccagttgagaagtccccagtttacaaacctcc 10265119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 10265157 - 10265254
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacc 152  Q
    ||||| ||||| |||||||||||| |||||||||| |||||| ||||||| ||| | | |||||||||  ||||||  |||||| |||| | ||||||    
T  10265157 aaaccacctgtatacaagccaccaattgagaagcccccagttcacaagcctccattcgagaagccaccgatttacacacctccattctagatgccacc 10265254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 10217379 - 10217515
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    |||||||| |||||||| || ||||| || ||||| |||||||||||||| | |||||| || || ||||| || || ||  | ||||| || || ||||    
T  10217379 cctgtttataagccacctgtagagaaaccaccagtgtacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctaca 10217478  T
Q  161 agcctccagttgagaagcctccggtctacaagccacc 197  Q
    |||| ||||| ||||| || || || |||||||||||    
T  10217479 agccaccagtagagaaaccgccagtgtacaagccacc 10217515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 10254096 - 10254184
Alignment:
Q  52 tacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagt 140  Q
    ||||| |||||||| ||||| |||||||| ||| | ||||| || || ||||||||||||| |||||| ||  |||||||||| |||||    
T  10254096 tacaagcctcctgtatacaaaccaccagtagagcaacctcccgtctataagccaccagtagagaagcctccaatttacaagccaccagt 10254184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 279
Target Start/End: Original strand, 10254306 - 10254518
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    ||||||||||| || || ||||||||  | ||||| |||||||||| ||| ||||| || ||||| || || ||  | || || || ||||| ||||| |    
T  10254306 tacaagccacctgtagaaaagcctcctatatacaaaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccac 10254405  T
Q  167 cagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaa 266  Q
    |||| ||||| || || || ||||||||||| ||| | ||||||||| || | || || |||||  | || ||||| || |||||||| ||||| |||||    
T  10254406 cagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaa 10254505  T
Q  267 gccaccagtttac 279  Q
    ||| |||| ||||    
T  10254506 gcctccagcttac 10254518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 10254612 - 10254688
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcc 134  Q
    ||||| || ||||||||||| |||||||| || || || ||||||||||| ||||  || |||||||||||||||||    
T  10254612 cctccagtgtacaagccaccggttgagaaaccacctgtctacaagccacctgtagaaaatccacctgtttacaagcc 10254688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 10265067 - 10265191
Alignment:
Q  55 aaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccg 154  Q
    |||||||| || ||||||||||||||||||||| | ||||||||||| || ||  ||| |||||| || ||  ||||||| || ||  | || ||||| |    
T  10265067 aaacctccggtgtacaagccaccagttgagaagtccccagtttacaaacctccgttagagaagcctccagtgcacaagccaccggttgagaaaccacctg 10265166  T
Q  155 tttacaagcctccagttgagaagcc 179  Q
    | |||||||| ||| ||||||||||    
T  10265167 tatacaagccaccaattgagaagcc 10265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 10254327 - 10254466
Alignment:
Q  58 cctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgttt 157  Q
    |||||| | ||||| |||||||| ||||| || ||||| ||||| ||||| || | ||| || || ||||| ||||| |||||  | || ||||| || |    
T  10254327 cctcctatatacaaaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgt 10254426  T
Q  158 acaagcctccagttgagaagcctccggtctacaagccacc 197  Q
    ||||||| |||||||||||||| ||  | |||||||||||    
T  10254427 acaagccaccagttgagaagcccccaatttacaagccacc 10254466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 10264647 - 10264717
Alignment:
Q  190 aagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagt 260  Q
    |||| ||||||||||||||| || || ||||||||||| || ||||||||||| ||| | ||||| |||||    
T  10264647 aagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagt 10264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 10264923 - 10265061
Alignment:
Q  61 cctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttaca 160  Q
    ||||| |||||||||||||||||||||  |||| ||||||| || | ||||| |||||| || ||  ||||||| | |||  | || ||||| ||  |||    
T  10264923 cctgtatacaagccaccagttgagaagtttccaatttacaaacctctagtagagaagcctccagtgcacaagccacgagttgagaaaccacctgtacaca 10265022  T
Q  161 agcctccagttgagaagcctccggtctacaagccacctg 199  Q
    |||| |||||||||||||  ||  | |||||||||||||    
T  10265023 agccaccagttgagaagctacctttttacaagccacctg 10265061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 10217055 - 10217188
Alignment:
Q  67 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctc 166  Q
    |||||||| || ||||||||||| || || || |||||||| ||||  || || || |||||||| || || ||  | || ||||| || |||||||| |    
T  10217055 tacaagccccctgttgagaagccacctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccac 10217154  T
Q  167 cagttgagaagcctccggtctacaagccacctgt 200  Q
    ||||||||||||| || |||||||| || |||||    
T  10217155 cagttgagaagccccccgtctacaaacctcctgt 10217188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 10243349 - 10243414
Alignment:
Q  171 tgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaa 236  Q
    ||||||||||||||| ||| | ||||| || || ||||| |||||||||||||| || ||||||||    
T  10243349 tgagaagcctccggtttaccaaccaccggtgtataagccaccagttgagaaacccccggtctacaa 10243414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 10265124 - 10265221
Alignment:
Q  82 gagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcc 179  Q
    ||||||||||||||  |||||||||| || | ||| |||||||| |||||||| ||| |  | ||||| || ||| ||||||||||| | ||||||||    
T  10265124 gagaagcctccagtgcacaagccaccggttgagaaaccacctgtatacaagccaccaattgagaagcccccagttcacaagcctccattcgagaagcc 10265221  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 10217373 - 10217425
Alignment:
Q  190 aagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 242  Q
    |||||||||||||| ||||| || || |||||||| ||||| |||||||||||    
T  10217373 aagccacctgtttataagccacctgtagagaaaccaccagtgtacaagccacc 10217425  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 10254454 - 10254530
Alignment:
Q  200 tttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagtt 276  Q
    |||||||||| ||||| |||||||| || || ||||||||||| ||| | ||||||||||   | ||||||||||||    
T  10254454 tttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccagcttacaagccaccagtt 10254530  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 10254515 - 10254691
Alignment:
Q  66 ttacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacccgtttacaagcct 165  Q
    |||||||||||||||||||||||| || ||  | || ||||||||    |||||||| ||| | ||||| ||| | ||||| ||||| ||| | ||||||    
T  10254515 ttacaagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcct 10254614  T
Q  166 ccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 242  Q
    |||||  | ||||| |||||  | || |||||||| |||||||| || || || || || || || |||||||||||    
T  10254615 ccagtgtacaagccaccggttgagaaaccacctgtctacaagccacctgtagaaaatccacctgtttacaagccacc 10254691  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 10265140 - 10265224
Alignment:
Q  68 acaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcctccagtctacaagccacc 152  Q
    |||||||||| |||||||| || || || |||||||||||| | | |||||| || ||| ||||||||||| || | ||||||||    
T  10265140 acaagccaccggttgagaaaccacctgtatacaagccaccaattgagaagcccccagttcacaagcctccattcgagaagccacc 10265224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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