View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9203_low_6 (Length: 606)

Name: NF9203_low_6
Description: NF9203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9203_low_6
NF9203_low_6
[»] chr4 (37 HSPs)
chr4 (18-594)||(27725249-27725822)
chr4 (22-158)||(27737379-27737514)
chr4 (488-580)||(53315375-53315467)
chr4 (490-583)||(2996619-2996712)
chr4 (526-583)||(6987708-6987765)
chr4 (488-572)||(6428075-6428159)
chr4 (489-567)||(27123282-27123360)
chr4 (492-561)||(18628486-18628555)
chr4 (522-579)||(52419581-52419638)
chr4 (490-577)||(3549486-3549573)
chr4 (540-583)||(28749888-28749931)
chr4 (492-570)||(8328052-8328130)
chr4 (526-572)||(19429479-19429525)
chr4 (490-564)||(21157833-21157907)
chr4 (488-566)||(24370880-24370958)
chr4 (489-571)||(25896842-25896924)
chr4 (490-572)||(46187840-46187922)
chr4 (526-583)||(11264347-11264404)
chr4 (526-583)||(41097223-41097280)
chr4 (494-567)||(56007741-56007814)
chr4 (491-571)||(4691906-4691986)
chr4 (532-572)||(21953005-21953045)
chr4 (488-572)||(33534098-33534182)
chr4 (478-582)||(54277242-54277346)
chr4 (542-581)||(2874607-2874646)
chr4 (491-582)||(7063539-7063630)
chr4 (477-572)||(7730657-7730751)
chr4 (490-569)||(25717653-25717732)
chr4 (491-582)||(47970343-47970434)
chr4 (488-546)||(2811554-2811612)
chr4 (491-569)||(25583652-25583730)
chr4 (478-572)||(32071925-32072014)
chr4 (488-570)||(45128239-45128321)
chr4 (526-579)||(28406962-28407015)
chr4 (490-571)||(29375961-29376042)
chr4 (491-572)||(51560221-51560302)
chr4 (540-572)||(14986958-14986990)
[»] chr2 (42 HSPs)
chr2 (489-562)||(3973609-3973682)
chr2 (488-572)||(28803459-28803543)
chr2 (487-583)||(43985255-43985351)
chr2 (490-575)||(4350744-4350829)
chr2 (489-582)||(43456637-43456730)
chr2 (528-583)||(11344739-11344794)
chr2 (488-563)||(22878164-22878239)
chr2 (477-572)||(30552561-30552656)
chr2 (527-580)||(4550796-4550849)
chr2 (478-563)||(14277812-14277897)
chr2 (528-580)||(1494415-1494467)
chr2 (478-582)||(32821856-32821960)
chr2 (513-583)||(1741986-1742056)
chr2 (488-582)||(9478346-9478440)
chr2 (524-566)||(43808621-43808663)
chr2 (519-572)||(12785920-12785973)
chr2 (491-580)||(17221472-17221561)
chr2 (493-569)||(1318296-1318371)
chr2 (491-582)||(787379-787470)
chr2 (489-572)||(5759505-5759587)
chr2 (540-583)||(10285906-10285949)
chr2 (491-570)||(29430817-29430896)
chr2 (495-550)||(34927042-34927097)
chr2 (489-551)||(6988197-6988259)
chr2 (538-572)||(9878661-9878695)
chr2 (540-582)||(12215854-12215896)
chr2 (489-539)||(17775396-17775446)
chr2 (488-582)||(43529787-43529881)
chr2 (530-571)||(1830103-1830144)
chr2 (488-573)||(9996794-9996879)
chr2 (513-550)||(10190345-10190382)
chr2 (492-565)||(13866942-13867015)
chr2 (529-566)||(15120246-15120283)
chr2 (490-563)||(25609862-25609935)
chr2 (526-583)||(34652003-34652060)
chr2 (537-582)||(43065428-43065473)
chr2 (490-582)||(33192249-33192340)
chr2 (546-582)||(36852519-36852555)
chr2 (478-573)||(37276802-37276895)
chr2 (528-572)||(39962268-39962312)
chr2 (489-572)||(43141928-43142012)
chr2 (491-547)||(45425293-45425349)
[»] chr5 (39 HSPs)
chr5 (488-572)||(14980566-14980650)
chr5 (488-572)||(29590559-29590642)
chr5 (488-582)||(11297125-11297219)
chr5 (491-582)||(32172700-32172791)
chr5 (527-572)||(38047847-38047892)
chr5 (488-572)||(11457155-11457239)
chr5 (489-572)||(35960470-35960552)
chr5 (488-566)||(499660-499738)
chr5 (490-572)||(36639579-36639661)
chr5 (491-572)||(11095427-11095508)
chr5 (490-575)||(25720348-25720433)
chr5 (488-572)||(16016355-16016439)
chr5 (528-572)||(16944944-16944988)
chr5 (490-582)||(34117479-34117570)
chr5 (490-574)||(39257325-39257409)
chr5 (513-572)||(10152391-10152450)
chr5 (488-571)||(12459930-12460013)
chr5 (492-571)||(35095720-35095798)
chr5 (491-582)||(37611147-37611238)
chr5 (491-582)||(37787877-37787968)
chr5 (537-572)||(40499704-40499739)
chr5 (489-559)||(12407660-12407730)
chr5 (528-582)||(28586735-28586789)
chr5 (490-572)||(40534256-40534338)
chr5 (530-580)||(41052917-41052967)
chr5 (490-572)||(42646948-42647029)
chr5 (491-552)||(7550450-7550511)
chr5 (537-582)||(11700356-11700401)
chr5 (532-565)||(12242683-12242716)
chr5 (493-582)||(29336677-29336766)
chr5 (488-553)||(37968953-37969018)
chr5 (478-547)||(38028618-38028687)
chr5 (532-572)||(2569668-2569708)
chr5 (490-562)||(5377128-5377200)
chr5 (490-566)||(10125649-10125725)
chr5 (496-572)||(13781812-13781888)
chr5 (532-572)||(14364279-14364319)
chr5 (484-572)||(30217139-30217226)
chr5 (488-572)||(34205298-34205382)
[»] chr6 (30 HSPs)
chr6 (491-583)||(8420129-8420221)
chr6 (488-583)||(2455856-2455951)
chr6 (491-569)||(733109-733187)
chr6 (488-572)||(32917254-32917338)
chr6 (529-572)||(9027635-9027678)
chr6 (489-567)||(2460081-2460159)
chr6 (513-583)||(27595521-27595591)
chr6 (488-565)||(30865547-30865624)
chr6 (488-572)||(31338033-31338118)
chr6 (478-572)||(8348283-8348377)
chr6 (500-582)||(34538159-34538241)
chr6 (526-575)||(2027765-2027814)
chr6 (490-583)||(9833042-9833134)
chr6 (526-583)||(27693406-27693463)
chr6 (491-572)||(27857415-27857496)
chr6 (491-572)||(32848528-32848609)
chr6 (526-582)||(32171350-32171406)
chr6 (493-573)||(33385585-33385665)
chr6 (535-582)||(725631-725678)
chr6 (488-566)||(3180998-3181076)
chr6 (530-568)||(32577957-32577995)
chr6 (530-568)||(34939574-34939612)
chr6 (526-575)||(9202957-9203006)
chr6 (531-568)||(31594356-31594393)
chr6 (532-569)||(34404600-34404637)
chr6 (488-572)||(281777-281861)
chr6 (534-582)||(740861-740909)
chr6 (532-568)||(10616514-10616550)
chr6 (543-583)||(27615257-27615297)
chr6 (501-573)||(33067214-33067286)
[»] chr8 (42 HSPs)
chr8 (529-580)||(30987961-30988012)
chr8 (490-582)||(43709309-43709403)
chr8 (488-583)||(12361238-12361335)
chr8 (490-566)||(30191072-30191148)
chr8 (528-583)||(31875564-31875619)
chr8 (528-582)||(4055585-4055639)
chr8 (529-582)||(8558707-8558760)
chr8 (493-570)||(21130671-21130748)
chr8 (526-582)||(14949913-14949969)
chr8 (488-567)||(4560564-4560643)
chr8 (493-551)||(24326109-24326167)
chr8 (488-572)||(5069754-5069836)
chr8 (529-582)||(6509273-6509326)
chr8 (489-582)||(9700048-9700141)
chr8 (525-566)||(37461205-37461246)
chr8 (488-569)||(39551138-39551219)
chr8 (488-568)||(7008660-7008739)
chr8 (488-544)||(11059658-11059714)
chr8 (488-572)||(40071806-40071890)
chr8 (488-539)||(3634613-3634664)
chr8 (479-582)||(4511075-4511178)
chr8 (497-572)||(11569395-11569470)
chr8 (524-583)||(27645950-27646009)
chr8 (488-583)||(43368629-43368724)
chr8 (530-572)||(9540967-9541009)
chr8 (526-572)||(9572927-9572973)
chr8 (491-561)||(18931230-18931300)
chr8 (494-563)||(25881350-25881419)
chr8 (536-581)||(29168642-29168687)
chr8 (537-582)||(37740405-37740449)
chr8 (488-572)||(4763951-4764035)
chr8 (488-572)||(6950379-6950463)
chr8 (490-566)||(11376766-11376842)
chr8 (490-578)||(11415205-11415293)
chr8 (488-544)||(14926911-14926967)
chr8 (544-572)||(25869251-25869279)
chr8 (501-569)||(26410340-26410408)
chr8 (488-572)||(26479842-26479926)
chr8 (543-583)||(29262858-29262898)
chr8 (530-566)||(30600320-30600356)
chr8 (526-566)||(32156971-32157011)
chr8 (490-566)||(44865497-44865573)
[»] chr7 (40 HSPs)
chr7 (488-582)||(48157049-48157143)
chr7 (490-582)||(36598287-36598379)
chr7 (488-582)||(1418468-1418560)
chr7 (488-567)||(39542229-39542308)
chr7 (490-572)||(33894684-33894766)
chr7 (491-575)||(8427067-8427151)
chr7 (488-572)||(23214912-23214996)
chr7 (488-580)||(27626052-27626144)
chr7 (526-582)||(44808205-44808261)
chr7 (491-570)||(30748966-30749045)
chr7 (537-579)||(5269536-5269578)
chr7 (488-566)||(25670515-25670593)
chr7 (489-582)||(30751566-30751659)
chr7 (494-583)||(45078324-45078413)
chr7 (489-572)||(24048599-24048680)
chr7 (488-564)||(31341200-31341276)
chr7 (488-572)||(39551477-39551561)
chr7 (531-579)||(47427275-47427323)
chr7 (488-563)||(34754739-34754814)
chr7 (538-573)||(44989908-44989943)
chr7 (532-566)||(3500940-3500974)
chr7 (490-564)||(3836614-3836688)
chr7 (488-582)||(12234818-12234912)
chr7 (530-572)||(36537965-36538007)
chr7 (526-572)||(39360080-39360126)
chr7 (491-568)||(2727290-2727367)
chr7 (513-582)||(12834916-12834985)
chr7 (490-575)||(20547321-20547406)
chr7 (526-575)||(25422380-25422429)
chr7 (489-566)||(28727693-28727770)
chr7 (542-583)||(29290379-29290420)
chr7 (535-572)||(33645937-33645974)
chr7 (543-572)||(39568308-39568337)
chr7 (538-583)||(44686976-44687021)
chr7 (490-566)||(8094369-8094445)
chr7 (500-580)||(22387837-22387917)
chr7 (491-547)||(25014031-25014087)
chr7 (492-564)||(27121527-27121599)
chr7 (532-564)||(31149705-31149737)
chr7 (532-564)||(31167997-31168029)
[»] chr3 (43 HSPs)
chr3 (489-575)||(21872225-21872311)
chr3 (488-580)||(25182919-25183008)
chr3 (490-551)||(22667481-22667542)
chr3 (490-551)||(22724120-22724181)
chr3 (478-583)||(52323813-52323918)
chr3 (490-582)||(24624257-24624349)
chr3 (493-551)||(11041160-11041218)
chr3 (492-582)||(33965421-33965511)
chr3 (526-572)||(37273191-37273237)
chr3 (489-559)||(50211805-50211875)
chr3 (477-582)||(36646300-36646405)
chr3 (491-572)||(41724269-41724350)
chr3 (488-567)||(11039707-11039786)
chr3 (532-583)||(49465909-49465960)
chr3 (501-583)||(20192548-20192630)
chr3 (479-572)||(24281104-24281197)
chr3 (488-565)||(40880877-40880954)
chr3 (526-570)||(1810036-1810080)
chr3 (490-558)||(24158447-24158515)
chr3 (491-563)||(27792938-27793010)
chr3 (488-572)||(36200153-36200237)
chr3 (492-572)||(37155058-37155138)
chr3 (492-572)||(37200413-37200493)
chr3 (495-566)||(50004715-50004787)
chr3 (527-566)||(2606278-2606317)
chr3 (491-566)||(10540425-10540500)
chr3 (529-572)||(14598523-14598566)
chr3 (529-572)||(42817192-42817235)
chr3 (526-572)||(11039306-11039352)
chr3 (526-572)||(21574547-21574593)
chr3 (530-572)||(31403075-31403117)
chr3 (526-572)||(49772635-49772681)
chr3 (490-547)||(25699129-25699186)
chr3 (500-569)||(53735913-53735982)
chr3 (488-568)||(1395700-1395780)
chr3 (488-572)||(2923535-2923619)
chr3 (488-572)||(11040543-11040627)
chr3 (491-547)||(20210860-20210916)
chr3 (489-565)||(24625272-24625348)
chr3 (490-546)||(27795944-27796000)
chr3 (526-582)||(29113509-29113565)
chr3 (530-582)||(31010449-31010501)
chr3 (484-556)||(47584523-47584595)
[»] chr1 (46 HSPs)
chr1 (490-580)||(1662622-1662712)
chr1 (488-569)||(23373242-23373323)
chr1 (490-582)||(15581301-15581393)
chr1 (490-573)||(4549472-4549555)
chr1 (527-570)||(38867799-38867842)
chr1 (498-572)||(44422756-44422830)
chr1 (532-581)||(11560535-11560584)
chr1 (488-572)||(5591896-5591979)
chr1 (492-572)||(32515374-32515454)
chr1 (488-571)||(4033946-4034029)
chr1 (525-572)||(15579539-15579586)
chr1 (488-547)||(27807197-27807256)
chr1 (488-583)||(30259415-30259510)
chr1 (488-582)||(3597210-3597304)
chr1 (488-566)||(28467496-28467574)
chr1 (490-572)||(43420315-43420397)
chr1 (491-580)||(14737658-14737747)
chr1 (536-577)||(17631079-17631120)
chr1 (526-571)||(23407489-23407534)
chr1 (491-564)||(26679419-26679492)
chr1 (489-582)||(45327627-45327720)
chr1 (526-571)||(49692019-49692064)
chr1 (488-572)||(10199337-10199421)
chr1 (488-572)||(12564428-12564512)
chr1 (489-582)||(17628646-17628735)
chr1 (488-572)||(27140535-27140619)
chr1 (490-582)||(31517671-31517763)
chr1 (488-564)||(51929391-51929467)
chr1 (488-551)||(6279477-6279540)
chr1 (488-575)||(16980857-16980944)
chr1 (488-583)||(29723535-29723630)
chr1 (478-517)||(33204313-33204352)
chr1 (488-571)||(34536216-34536299)
chr1 (529-572)||(37941955-37941998)
chr1 (530-573)||(49521776-49521819)
chr1 (491-572)||(4868457-4868537)
chr1 (488-561)||(5157140-5157213)
chr1 (475-520)||(6292601-6292646)
chr1 (537-582)||(27145589-27145634)
chr1 (532-572)||(6262795-6262835)
chr1 (490-566)||(15709912-15709988)
chr1 (536-572)||(19412574-19412610)
chr1 (538-582)||(27145968-27146012)
chr1 (488-572)||(28075761-28075845)
chr1 (533-581)||(43771885-43771933)
chr1 (488-571)||(48282182-48282263)
[»] scaffold0024 (1 HSPs)
scaffold0024 (494-565)||(27640-27711)
[»] scaffold0110 (1 HSPs)
scaffold0110 (490-560)||(4154-4224)
[»] scaffold0012 (1 HSPs)
scaffold0012 (543-572)||(38649-38678)


Alignment Details
Target: chr4 (Bit Score: 462; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 18 - 594
Target Start/End: Complemental strand, 27725822 - 27725249
Alignment:
Q  18 attaggaatttaaaggggctatactccaacaaggacaaggcagtgaatatgaaacaaaattgaattcttattaatattttatttgcgttttagatgtaaa 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  27725822 attaggaatttaaagggactatactccaacaaggacaaggcagtgaatatgaaacaaaattgaattcttataaatattttatttgtgttttagatgtaaa 27725723  T
Q  118 aactaaatgaactgacaaaatgtttgtctgtcaaaaacaaagatgaatcttcccaggtattttttgctacnnnnnnnnnnnnnnnnnnnnnnnttgagct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                        |||||||    
T  27725722 aactaaatgaactgacaaaatgtttgtctgtcaaaaacaaagatgaatcttcccaggtattttttgctaaaaaaaaataaaacaaacaaaaaattgagct 27725623  T
Q  218 catggactccatcaacttcaccaaccaaatcactactagctcaactcatccacacttcacttggattgcaagcgtcttcacaatatctggacaaccatca 317  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27725622 catggactccatcaacttcaccaaccaaatcacta---gctcaactcatccacacttcacttggattgcaagcgtcttcacaacatctggacaaccatca 27725526  T
Q  318 ttgccaccggtgaaagttgctttgaccattggaaccgaacaagttggttttcctaagcatagctgctcaaattacagtcacacagaacatgttatttatc 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27725525 ttgccaccggtgaaagttgctttgaccattggaaccgaacaagttggttttcctaagcatagctgctcaaattacagtcacacagaacatgttatttatc 27725426  T
Q  418 accttcatatttgtcacaacatataaaacagaaaatgataaaaataaaagagaaagagtttgtttagaccgacttatttgagcttatctactgagataag 517  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27725425 accttcatatttgtcacagcatataaaacagaaaatgataaaaataaaagagaaagagtttgtttagaccgacttatttgagcttatctactgagataag 27725326  T
Q  518 cacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatgtccat 594  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27725325 cacatatacgactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 27725249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 27737514 - 27737379
Alignment:
Q  22 ggaatttaaaggggctatactccaacaaggacaaggcagtgaatatgaaacaaaattgaattcttattaatattttatttgcgttttagatgtaaaaact 121  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  27737514 ggaatttaaagggact-tactccaacaaggacaaggcagtgaatatgaaacaaaattgaattcttataaattttttatttgtgttttagatgtaaaaact 27737416  T
Q  122 aaatgaactgacaaaatgtttgtctgtcaaaaacaaa 158  Q
    ||||||||| ||||||||||||| ||||||| |||||    
T  27737415 aaatgaactaacaaaatgtttgtttgtcaaatacaaa 27737379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 580
Target Start/End: Complemental strand, 53315467 - 53315375
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    |||||||||||||||||| ||||  |||||||||||||||||| |||| ||||||||||| ||| ||| ||| |||||||||||| |||||||    
T  53315467 gacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccataagctatttt 53315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 490 - 583
Target Start/End: Complemental strand, 2996712 - 2996619
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||| ||||| || ||| |||||||| | | |||||||||||||||||||||| ||| |||||||||||||||||||| || |||||||    
T  2996712 cttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaa 2996619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 6987708 - 6987765
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  6987708 agactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaa 6987765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 6428159 - 6428075
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||| || ||  |||||||| | | |||| ||||||||||| ||||| ||| ||||||||||||||||||||    
T  6428159 gacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataa 6428075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 567
Target Start/End: Original strand, 27123282 - 27123360
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||    
T  27123282 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 27123360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 561
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 561  Q
    |||||||||||||||||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 579
Target Start/End: Original strand, 52419581 - 52419638
Alignment:
Q  522 tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattt 579  Q
    ||||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  52419581 tataagactgtttgagagaccttatgaaaacaacttattacatgttcataaactattt 52419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 577
Target Start/End: Original strand, 3549486 - 3549573
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 577  Q
    ||||||| || ||||||| ||  |||||||| ||| ||||||||||||||| |||||| |||||   ||||||||||||| |||||||    
T  3549486 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 3549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 28749888 - 28749931
Alignment:
Q  540 agcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  28749888 agcttatggaaataacttattacatgtccataaactgttttcaa 28749931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 570
Target Start/End: Original strand, 8328052 - 8328130
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    |||||||||||||||| ||  |||||||| ||| ||||||||||  | |||||||| ||| || |||||||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtccat 8328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 572
Target Start/End: Original strand, 19429479 - 19429525
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  19429479 agactgtttgggagagcttatggagaaaacttatgacatgtccataa 19429525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 21157907 - 21157833
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||||  ||||||||  |||| | ||||||||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacat 21157833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 566
Target Start/End: Original strand, 24370880 - 24370958
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||||||||| |   |||||||||| | ||| ||||||| | | |||||||||| ||||||||||||||    
T  24370880 gacttatttgagcttatctattcgcataagcacatgtgagaatgtttgataaaacttatggaaacaacttatgacatgt 24370958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 25896924 - 25896842
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||||||| |||||||||   || ||||| | | |||||||||  |||||||||| |||||| |||||||||||||||||    
T  25896924 acttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccata 25896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 572
Target Start/End: Original strand, 46187840 - 46187922
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||  |||| ||| ||| ||||||||| |||| | ||||||||| || |||||| ||||| ||||    
T  46187840 cttatttgagcttatctactggcataaacacttatgagactgtttaagagggtttatggaaacaatttatgatatgtctataa 46187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 583
Target Start/End: Complemental strand, 11264404 - 11264347
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||| |||||||    
T  11264404 agactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaa 11264347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 41097223 - 41097280
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||| | |||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  41097223 agactgttcgggagagcttatagaaacaactaatgacatgtccataagctattttcaa 41097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 56007814 - 56007741
Alignment:
Q  494 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    ||||| |||||||||||  |||| ||| | |||||||||||||||||||| ||  || ||||||||||||||||    
T  56007814 tttgaacttatctactggcataatcacttgtaagactgtttgagagagctaatacaagtaacttatgacatgtc 56007741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 571
Target Start/End: Complemental strand, 4691986 - 4691906
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||||||||||||||||  | || ||| | | ||||| ||||||| | |||||||||| ||||||||||||| |||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccata 4691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 572
Target Start/End: Complemental strand, 21953045 - 21953005
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  21953045 tttgggagagcttatggaaagaacttatgacatgtccataa 21953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 33534098 - 33534182
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||| ||| ||||| || | | ||| | |||||||||||||||| ||| || || |||||| |||||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataa 33534182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 582
Target Start/End: Original strand, 54277242 - 54277346
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 577  Q
    ||||||||  ||||||||||| |||||||| ||| |||| ||| ||| |||||||| | |||||||||  |||| | ||||| |||||| |||||  |||    
T  54277242 tgtttagattgacttatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttacagaaacagcttatcacatgttcataagttat 54277341  T
Q  578 tttca 582  Q
    |||||    
T  54277342 tttca 54277346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 2874607 - 2874646
Alignment:
Q  542 cttatggaaataacttatgacatgtccataaactattttc 581  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  2874607 cttatggaaacaacttatgacatgtccataatctattttc 2874646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 7063630 - 7063539
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||| ||||| ||| ||| | || | | ||||||||| ||||| ||||||| || || ||||||||| ||||||| |||||||||    
T  7063630 ttatttgagctcatctaatgatataggtacttgtgagactgtttaagagatcttatgggaacaatttatgacatttccataagctattttca 7063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 572
Target Start/End: Complemental strand, 7730751 - 7730657
Alignment:
Q  477 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||| || ||||||||||||||| ||||| ||| |||| |||   | ||||| |||  ||||||||| ||||| ||||||||||||||||||||    
T  7730751 ttgtttggatcgacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccataa 7730657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 569
Target Start/End: Complemental strand, 25717732 - 25717653
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||||||||||||| ||| || |||||||| | | | | ||||||  |||||||||||||| |||||||||| ||||||    
T  25717732 cttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 47970434 - 47970343
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||||||||| |||||||| | | | ||||||   || ||||||||||||  |||| |||||| |||||||| | ||||||    
T  47970434 ttatttgagcttatctactgacataagcacttgtgaaactgttatggaaagcttatggaaactacttgtgacatttccataaattgttttca 47970343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 546
Target Start/End: Complemental strand, 2811612 - 2811554
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat 546  Q
    |||||||||||| ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  2811612 gacttatttgaggttatctactggcataagcatttatgagactgtttgagagagattat 2811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 569
Target Start/End: Complemental strand, 25583730 - 25583652
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||||||| |||||| |||| |||| ||  | | |||||||||| ||| ||||||| ||| |||||||||||||||||    
T  25583730 ttatttgagtttatcttctgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcca 25583652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 572
Target Start/End: Complemental strand, 32072014 - 32071925
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||| ||| |||||||||||| ||||||| ||| |||||||| | | |||| |||||||     ||||||||| ||||||||||| ||||||||    
T  32072014 tgtttggactgacttatttgagtttatctattgacataagcacttgtgagacagtttgag-----ttatggaaacaacttatgacacgtccataa 32071925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 570
Target Start/End: Original strand, 45128239 - 45128321
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    ||||||||||| ||||||||| |  |||| ||||| | | | |||||||||||||||||||||| |||| ||  |||||||||    
T  45128239 gacttatttgaacttatctaccggcataaccacatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccat 45128321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 579
Target Start/End: Complemental strand, 28407015 - 28406962
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattt 579  Q
    |||||| ||||||||||||| ||||| |||| ||||||| | ||||||||||||    
T  28407015 agactggttgagagagcttacggaaacaactcatgacatattcataaactattt 28406962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 571
Target Start/End: Complemental strand, 29376042 - 29375961
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||||| |||||||| ||| |||||||| | | |  || ||| |||||||||||||||| | ||||||||| |||||||    
T  29376042 cttatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccata 29375961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 572
Target Start/End: Original strand, 51560221 - 51560302
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||| |||||||||||||||  |||||||| ||| ||||| |||| |||| |||||| ||| | ||||| |||||| |||||    
T  51560221 ttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacaccttatcacatgttcataa 51560302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 572
Target Start/End: Original strand, 14986958 - 14986990
Alignment:
Q  540 agcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| ||||||||||||||||||||||||    
T  14986958 agcttatgaaaataacttatgacatgtccataa 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 3973682 - 3973609
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgac 562  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  3973682 acttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttatgac 3973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 28803459 - 28803543
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||| |  |||||||||| | ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  28803459 gacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataa 28803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 583
Target Start/End: Complemental strand, 43985351 - 43985255
Alignment:
Q  487 cgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||| || ||||||||||| |||| ||| | ||| |||||||||||||| |||  |||| |||||||||||||||||||| || |||||||    
T  43985351 cgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaa 43985255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 490 - 575
Target Start/End: Complemental strand, 4350829 - 4350744
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    ||||||||||||| |||||||| |||||||| ||  ||| ||||||||||| |||||| ||| | |||||||||||| ||||||||    
T  4350829 cttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcataaact 4350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 43456637 - 43456730
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||| ||||| |||| | |||| ||| | ||||||||||||| ||||||| || ||| |||| |||||||||||||||||| ||||||    
T  43456637 acttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttca 43456730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 11344739 - 11344794
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||    
T  11344739 actgtttgacagaccttatggaaacaacttatgacatgtccataaactgttttcaa 11344794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 22878239 - 22878164
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    |||||||||||||||||| ||||| |||||||| | | |||||||||| |||| |||||||||| || ||||||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgaca 22878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 477 - 572
Target Start/End: Original strand, 30552561 - 30552656
Alignment:
Q  477 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||  ||| |||||||||||||||||||  |||||||| | | | ||||||||||| || |||| |||| ||||||||||||||| ||||    
T  30552561 ttgtttagattgacatatttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaataa 30552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 580
Target Start/End: Complemental strand, 4550849 - 4550796
Alignment:
Q  527 gactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 14277812 - 14277897
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    |||||||||||||||||||||| |||||||| || ||||| || | | ||| ||||||  |||||| ||||||| |||||||||||    
T  14277812 tgtttagaccgacttatttgagtttatctacggacataagtacttgtgagagtgtttggaagagctcatggaaacaacttatgaca 14277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 580
Target Start/End: Original strand, 1494415 - 1494467
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttt 1494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 582
Target Start/End: Complemental strand, 32821960 - 32821856
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 577  Q
    ||||||||  |||||||||||||||||||||  |  ||||||  |  |||||||||||  |||| |||| |||| |||||||||||||||||||| || |    
T  32821960 tgtttagattgacttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgt 32821861  T
Q  578 tttca 582  Q
    |||||    
T  32821860 tttca 32821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 583
Target Start/End: Original strand, 1741986 - 1742056
Alignment:
Q  513 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||  || ||||| |||| ||||||||||||||| |||||||||||||| ||||| |||| |||||    
T  1741986 ataagcacccatgagactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaa 1742056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 9478440 - 9478346
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||| |||||||||  | ||||| || | |  ||||||||||||||| ||||| ||| ||||||| |||||||||||| || ||||||    
T  9478440 gacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttca 9478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 524 - 566
Target Start/End: Complemental strand, 43808663 - 43808621
Alignment:
Q  524 taagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  43808663 taagactatttgagagagcttatgaaaataacttatgacatgt 43808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 519 - 572
Target Start/End: Complemental strand, 12785973 - 12785920
Alignment:
Q  519 acatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||| |||||| |||||||||||||| ||||| |||||| |||||||||||||    
T  12785973 acataaaagactatttgagagagcttacggaaacaacttacgacatgtccataa 12785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 580
Target Start/End: Original strand, 17221472 - 17221561
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||||||  ||||||||||  || ||||| | | |||||||| |  |||||||||||||||| |||||||||| |||||||||| ||||    
T  17221472 ttatttgaaattatctactgtcattagcacttctgagactgttcggaagagcttatggaaatatcttatgacatatccataaactttttt 17221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 569
Target Start/End: Complemental strand, 1318371 - 1318296
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||||| ||||||||||  |||||||| | | |||||||||| ||||||||||| ||| | |||||||||||||||    
T  1318371 atttgagattatctactgc-ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 787470 - 787379
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||| |||| |||||||||  |||||||| | | | |||||||| |||| |||||| ||| | |||||||||||||||||| || ||||||    
T  787470 ttattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttca 787379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 572
Target Start/End: Original strand, 5759505 - 5759587
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| ||||||| ||  ||||| || | | |||||||||| ||||||||||||||| | |||| |||||||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataa 5759587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Complemental strand, 10285949 - 10285906
Alignment:
Q  540 agcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||| |||||||||||||||||||||||| || |||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaa 10285906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 570
Target Start/End: Complemental strand, 29430896 - 29430817
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    ||||||||||||||||||||| |||| ||| | |  |||| ||||  ||| |||||| ||||| ||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 550
Target Start/End: Complemental strand, 34927097 - 34927042
Alignment:
Q  495 ttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaa 550  Q
    |||||||||| |||||| |||||||| ||||||||||||||  ||| |||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttatggaa 34927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 551
Target Start/End: Complemental strand, 6988259 - 6988197
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    |||||||||| |||||||||||| |||| ||| ||  ||| ||||||||||||||||| ||||    
T  6988259 acttatttgaacttatctactgatataatcacctacgagattgtttgagagagcttatagaaa 6988197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 572
Target Start/End: Original strand, 9878661 - 9878695
Alignment:
Q  538 agagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||| ||||||||||||||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataa 9878695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 12215896 - 12215854
Alignment:
Q  540 agcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||| |||||||||||||||||| || ||||||    
T  12215896 agcttatggaaatagcttatgacatgtccataagctgttttca 12215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 539
Target Start/End: Original strand, 17775396 - 17775446
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagag 539  Q
    |||||||||||| |||||||||| |||||| | | ||||||||||||||||    
T  17775396 acttatttgagcatatctactgacataagctcttttaagactgtttgagag 17775446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 43529787 - 43529881
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||||| ||  |||||||| | | | |||||||| ||||  ||||| ||| | |||||| ||||| ||||| |||||||||    
T  43529787 gacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagctattttca 43529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 571
Target Start/End: Complemental strand, 1830144 - 1830103
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  1830144 tgtttgggagagcttatggaaacatcttatgacatgtccata 1830103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 573
Target Start/End: Complemental strand, 9996879 - 9996794
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    |||||||||||||||||| |||   ||||| || | | |||||| ||| |||||||||| |||| ||||||||||||  |||||||    
T  9996879 gacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaa 9996794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 10190382 - 10190345
Alignment:
Q  513 ataagcacatataagactgtttgagagagcttatggaa 550  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  10190382 ataaacacttataagactgtttgagagagcttatggaa 10190345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 565
Target Start/End: Complemental strand, 13867015 - 13866942
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 565  Q
    |||||||||||||||||||  |||| ||| | | ||||||||||||||| |||| | ||| ||| |||||||||    
T  13867015 tatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 566
Target Start/End: Complemental strand, 15120283 - 15120246
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 25609935 - 25609862
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    |||||||||||||||||||| | ||||| || | | |||||| |||  | |||||||||||| |||||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgaca 25609862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 34652003 - 34652060
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||| ||| |||| ||||||| |||| |||||||||||||||||||| || |||||||    
T  34652003 agacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaa 34652060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 43065428 - 43065473
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttca 43065473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 582
Target Start/End: Complemental strand, 33192340 - 33192249
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||||| |||| |||| |||  || ||||||||||| ||| |||||| ||| |  ||||||||| ||||||| || ||||||    
T  33192340 cttatttgagcttatctgctgacataaacactcatgagactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttca 33192249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 36852555 - 36852519
Alignment:
Q  546 tggaaataacttatgacatgtccataaactattttca 582  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  36852555 tggatataacttatgacatgtctataaactattttca 36852519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 573
Target Start/End: Complemental strand, 37276895 - 37276802
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    ||||| || |||||||||| || ||||||||| | |||||||| | | |||||||||| ||| |  ||| |||||| |||||||||||| ||||||    
T  37276895 tgtttggatcgacttatttaagtttatctactaatataagcacttgtgagactgtttgggaggg--tatagaaatagcttatgacatgttcataaa 37276802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 572
Target Start/End: Original strand, 39962268 - 39962312
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| |||||||||| |||| || |||||||||||||||||    
T  39962268 actgtttgggagagcttatagaaacaatttatgacatgtccataa 39962312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 572
Target Start/End: Complemental strand, 43142012 - 43141928
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat-ggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||| | |||||||  | | | || |||||| || |||||| ||||| ||||||||||||| ||||||    
T  43142012 acttatttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataa 43141928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 547
Target Start/End: Complemental strand, 45425349 - 45425293
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    |||||||||||||| ||||| ||||| ||| ||| | |||||||||||||| |||||    
T  45425349 ttatttgagcttatttactgggataaacacttatgaaactgtttgagagagtttatg 45425293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 14980650 - 14980566
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatata-agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||  |||| ||||||||||||| |||||    
T  14980650 gacttatttgagcttatctactggcataagcac-tatagagactgtttgagagagcttataaaaatgacttatgacatgtacataa 14980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 29590559 - 29590642
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||| || |||||||| ||| ||||||||||||  |||||||||| | |||||||||| |||||||||    
T  29590559 gacttatttgagcttatctacagacataagcac-tatgagactgtttgagttagcttatggacaaaacttatgacttgtccataa 29590642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 11297125 - 11297219
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||| |||||||||| ||  |||| ||| | ||||||||||||| |||||||||||||| |||||| |||||||| || | |||||||||    
T  11297125 gacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagctattttca 11297219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 32172791 - 32172700
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||| ||||   |||||||| | | |||  ||||| ||||||||||||||| |||||||||||||||||||| | |||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttca 32172700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 572
Target Start/End: Original strand, 38047847 - 38047892
Alignment:
Q  527 gactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  38047847 gactgtttgggagagcttatggaaacaacttatgacatgtccataa 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 11457239 - 11457155
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||| ||  | || ||| | | |||||||||   |||||||||||||| ||||||||||||||||||||    
T  11457239 gacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataa 11457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 572
Target Start/End: Complemental strand, 35960552 - 35960470
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||| | ||  ||||||| || | ||||| |||||||||||||||||||  |||||| |||||||||||||    
T  35960552 acttatttgagcttatcaattggcataagca-atgtcagactatttgagagagcttatggaagcaacttacgacatgtccataa 35960470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 566
Target Start/End: Original strand, 499660 - 499738
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||||| ||||||| |||||||| | | || ||||||| |||| |||||| ||| | ||||||||||||    
T  499660 gacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt 499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 36639661 - 36639579
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||| |||| ||| | | |||||||| ||||||||||||||||||| |||| | ||||  |||||||| |||||||||    
T  36639661 cttatttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaattgcttatgacgtgtccataa 36639579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 572
Target Start/End: Original strand, 11095427 - 11095508
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||| |||||||||||||| |||| ||| | | | | ||||||||||| ||| |||||| | ||||||||||||||||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataa 11095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 575
Target Start/End: Original strand, 25720348 - 25720433
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    |||||||||| ||||||||||  |||||||| | | ||||||| |||||||||||||  ||| || | ||||||||| ||||||||    
T  25720348 cttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcataaact 25720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 16016355 - 16016439
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||| | ||| |||||||| | | ||||||||| | | |||| || |||||||||||||| ||| ||||||    
T  16016355 gacttatttgagcttatcaaatgacataagcacttgtcagactgttttacaaagctaatagaaataacttatgaaatgcccataa 16016439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 572
Target Start/End: Original strand, 16944944 - 16944988
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||    
T  16944944 actgtttgagagaggtcatggaaataacttatgatatgtccataa 16944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 582
Target Start/End: Original strand, 34117479 - 34117570
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||| ||||||||||||||  |||| ||| | | ||||||| || ||||||||||||| | ||||||||||||| |||||| || ||||||    
T  34117479 cttattggagcttatctactggcataaacacttgttagactgtctg-gagagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 574
Target Start/End: Original strand, 39257325 - 39257409
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaac 574  Q
    ||||||| |||||||||||| | |||||||| | | ||||||| || || ||||||  |||| |||| |||||||||||||||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagactgtgtgcgaaagcttagagaaacaactaatgacatgtccataaac 39257409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 572
Target Start/End: Complemental strand, 10152450 - 10152391
Alignment:
Q  513 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| | ||||| |||  ||||||||||| ||| ||||||||||||||||||||    
T  10152450 ataagcacatgtgagactattttggagagcttatgaaaacaacttatgacatgtccataa 10152391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 571
Target Start/End: Original strand, 12459930 - 12460013
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    |||||||||  |||||||| |||| |||||||| | | |||||||||| |||| | |||| ||| |||||||||||||| ||||    
T  12459930 gacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcata 12460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 571
Target Start/End: Original strand, 35095720 - 35095798
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    |||||||| ||||||||| | |||| |||  || ||||||||||  |||||||||||||||| |||||||||||| ||||    
T  35095720 tatttgagtttatctactaa-ataaacactaatgagactgtttggaagagcttatggaaatatcttatgacatgtacata 35095798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 582
Target Start/End: Original strand, 37611147 - 37611238
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttca 37611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 582
Target Start/End: Original strand, 37787877 - 37787968
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttca 37787968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 40499704 - 40499739
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40499704 gagagcttatggaaacaacttatgacatgtccataa 40499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 559
Target Start/End: Original strand, 12407660 - 12407730
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 559  Q
    |||||||||| |||||||| ||| |||| ||| | | |||| ||||||||||||||||| |||| ||||||    
T  12407660 acttatttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaatgacttat 12407730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 528 - 582
Target Start/End: Original strand, 28586735 - 28586789
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| ||||||||||||||||| |||||||||| ||| ||| || ||||||    
T  28586735 actgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttca 28586789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 40534338 - 40534256
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| |||| |||||| |||| ||| | | | |||||||  |||||||||||||| || |||||||||||| |||||    
T  40534338 cttatttgagtttatttactgacataaacacttgtgatactgtttaggagagcttatggaagtagcttatgacatgttcataa 40534256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 580
Target Start/End: Complemental strand, 41052967 - 41052917
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    |||||| |||||||||| |||| ||| |||||||||| |||||||||||||    
T  41052967 tgtttgggagagcttatagaaacaacctatgacatgttcataaactatttt 41052917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 42647029 - 42646948
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||| || ||||| |  |||||| ||||  ||| |||||| ||||| |||||||||||| |||||    
T  42647029 cttatttgagcttatctactgacattagcac-ttgaagactatttggaagaacttatgaaaatagcttatgacatgttcataa 42646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 552
Target Start/End: Original strand, 7550450 - 7550511
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaat 552  Q
    ||||||||||||||| ||||| ||||  || | | ||||| |||||||||||||||||||||    
T  7550450 ttatttgagcttatccactgacataattacttgtgagactctttgagagagcttatggaaat 7550511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 11700356 - 11700401
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||    
T  11700356 gagagtttatggaaacaacttatgacatgtccataagctgttttca 11700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 12242683 - 12242716
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatg 565  Q
    |||||||||||||||||||| |||||||||||||    
T  12242683 tttgagagagcttatggaaaaaacttatgacatg 12242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 582
Target Start/End: Complemental strand, 29336766 - 29336677
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||| ||||||| ||  | |||||| | | |||||| ||||||||||||||||||| |||||||| |||  ||||||| | ||||||    
T  29336766 atttgagtttatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatggcatacccataaaatgttttca 29336677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 37969018 - 37968953
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaata 553  Q
    ||||| |||||||||||||||||| ||||| || | | | ||||||||||||| |||||| |||||    
T  37969018 gacttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaata 37968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 38028687 - 38028618
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    ||||| |||||||||||||||||||||||||||  || |  || ||| ||||| ||| ||||||||||||    
T  38028687 tgtttggaccgacttatttgagcttatctactggtatgaaaacttatgagactatttcagagagcttatg 38028618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 572
Target Start/End: Original strand, 2569668 - 2569708
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  2569668 tttgagattgcttatggaaatagcttatgacatgtccataa 2569708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 5377128 - 5377200
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgac 562  Q
    |||||||||||||||||| ||| |||||||| | |||||||||| | || | |||||| ||| | ||||||||    
T  5377128 cttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttatgac 5377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 566
Target Start/End: Original strand, 10125649 - 10125725
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||| |||||||||||||| || ||||| | | | | ||| ||||||| |||||| ||| ||||||||||||||    
T  10125649 cttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgt 10125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 572
Target Start/End: Original strand, 13781812 - 13781888
Alignment:
Q  496 tgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||| | ||||| || | | ||||||||||  ||||||| | |||||| |||||||||||| |||||    
T  13781812 tgagcttatctactaacataagtacttgtgagactgtttggtagagcttgtagaaatagcttatgacatgtgcataa 13781888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 572
Target Start/End: Complemental strand, 14364319 - 14364279
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||| |||||||||||| | ||||||||||||||||||    
T  14364319 tttgagaaagcttatggaaacagcttatgacatgtccataa 14364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 572
Target Start/End: Complemental strand, 30217226 - 30217139
Alignment:
Q  484 gaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||| | ||||||| | |  |||||||| | | |||||||||  |||||||||||||| || |||||| |||||||||||    
T  30217226 gaccgacttatttcaacttatcttccggtataagcacttgtgagactgtttaggagagcttatggaattatcttatg-catgtccataa 30217139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 34205382 - 34205298
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| ||||| |||||| |||||||  |||   ||| |||  ||||||||||||||| |||||||| ||||| |||||    
T  34205382 gacttatttgaacttatttactgacataagcatttatggaactattttggagagcttatggaaacaacttatgtcatgttcataa 34205298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 491 - 583
Target Start/End: Original strand, 8420129 - 8420221
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||||||||||| ||| |||| ||| | | |||||||| | |||||||||| |||||| ||||||||||||||| || ||||||||||    
T  8420129 ttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaa 8420221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 2455951 - 2455856
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||||||||||||||| |  |||||||| |   ||| |||||   |||||||||||||| ||||||||||||| |||||||||||||||||    
T  2455951 gacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaa 2455856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 569
Target Start/End: Original strand, 733109 - 733187
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    |||||||||||||||||||   |||||||| ||||  ||| ||||| |||||| |||||||||||||||||||||||||    
T  733109 ttatttgagcttatctactaccataagcacttatagaactctttgatagagctgatggaaataacttatgacatgtcca 733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 32917338 - 32917254
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| ||||||| |||||   |||| ||| | | |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32917338 gacttattagagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataa 32917254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 572
Target Start/End: Complemental strand, 9027678 - 9027635
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataa 9027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 567
Target Start/End: Original strand, 2460081 - 2460159
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||    
T  2460081 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 2460159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 583
Target Start/End: Original strand, 27595521 - 27595591
Alignment:
Q  513 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||| ||| |||||||||| ||||  ||||||||| |||||||||||||| ||||| ||||||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttcaa 27595591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 30865624 - 30865547
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 565  Q
    |||||||||||||||||||  | | |||| ||| | | |||| |||| ||||||||||||||||||||||||||||||    
T  30865624 gacttatttgagcttatctgttaacataaacacttgttagacagtttaagagagcttatggaaataacttatgacatg 30865547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 31338118 - 31338033
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgttt-gagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||||   |||||||| || || ||| ||| | ||||||||||| ||| ||||||||||||||||||||    
T  31338118 gacttatttgagcttatctactagcataagcacgtacaaaactcttttgtgagagcttatgaaaacaacttatgacatgtccataa 31338033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 572
Target Start/End: Complemental strand, 8348377 - 8348283
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| |||||||||| ||||||||||| || |||| ||  | | | |||||||||||||||||| | ||| ||||||| ||||| ||||||    
T  8348377 tgtttagatcgacttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataacatgaccataa 8348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 582
Target Start/End: Original strand, 34538159 - 34538241
Alignment:
Q  500 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||| | |||||||| | | ||||| ||||||||| |||||  ||| | |||| |||||||||||||||||||||||    
T  34538159 cttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttca 34538241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 2027765 - 2027814
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    |||||||||| |||||||||| |||| ||||||||||||||| |||||||    
T  2027765 agactgtttgggagagcttatagaaacaacttatgacatgtcaataaact 2027814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 583
Target Start/End: Original strand, 9833042 - 9833134
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||| ||||||| ||   |||| || ||| ||||| ||||||||| |||||||||| ||| |||| |||||||||||| |||||||||    
T  9833042 cttatttgagtttatctattggcgtaagtacttatgagactatttgagagatcttatggaaa-aacatatggcatgtccataaattattttcaa 9833134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 27693406 - 27693463
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||| ||||||||||    
T  27693406 agactatttgagagaatttatggaaacaacttatgacatgttcataagctattttcaa 27693463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 572
Target Start/End: Complemental strand, 27857496 - 27857415
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||| ||||||||||| |||  ||| | | | |||||||| ||||||||||| ||| |||||||||||| |||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataa 27857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 572
Target Start/End: Original strand, 32848528 - 32848609
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||| |||||||  | | || | ||| | ||||||||||||||||| ||||||| || |||||||    
T  32848528 ttatttgagcttatctactgacataagcatttgtgagtccgttggggagagcttatggaaatagcttatgatatttccataa 32848609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 526 - 582
Target Start/End: Original strand, 32171350 - 32171406
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||| || |||||||||    
T  32171350 agactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttca 32171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 573
Target Start/End: Complemental strand, 33385665 - 33385585
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    |||||| |||||||||||| |||||||| | | | ||||||||  |||| ||||||||| | || ||||||||||||||||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 33385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 582
Target Start/End: Original strand, 725631 - 725678
Alignment:
Q  535 gagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgtagactattttca 725678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 566
Target Start/End: Original strand, 3180998 - 3181076
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||||||| ||||||||| || |||||||| | | ||||| ||||| |||||| ||| ||| ||||||||| ||||    
T  3180998 gacttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttatgaaatgt 3181076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 32577957 - 32577995
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtcc 32577995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Complemental strand, 34939612 - 34939574
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtcc 34939574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 9202957 - 9203006
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    ||||||||||||||| |||||| |||||||| ||| ||||| ||||||||    
T  9202957 agactgtttgagagaacttatgaaaataactcatggcatgttcataaact 9203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 31594356 - 31594393
Alignment:
Q  531 gtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  31594356 gtttgagagaggttatggaaacaacttatgacatgtcc 31594393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 569
Target Start/End: Complemental strand, 34404637 - 34404600
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtcca 569  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  34404637 tttgggagagcttatggaaacaacttatgacatgtcca 34404600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 281777 - 281861
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||| ||||| |||| || ||| ||||| || | | |||||||||| ||||||| ||||||  ||||||||||||||| ||||    
T  281777 gacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataa 281861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 534 - 582
Target Start/End: Original strand, 740861 - 740909
Alignment:
Q  534 tgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||| |||||| |||||||||||||| |||||  ||||||||    
T  740861 tgagagagcttgtggaaacaacttatgacatgttcataagttattttca 740909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 568
Target Start/End: Original strand, 10616514 - 10616550
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtcc 10616550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 27615257 - 27615297
Alignment:
Q  543 ttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||| |||||||||||||| ||||| ||||||||||    
T  27615257 ttatggaaacaacttatgacatgttcataagctattttcaa 27615297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 573
Target Start/End: Complemental strand, 33067286 - 33067214
Alignment:
Q  501 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    ||||||||||| |||||||| | |||||||| ||| |||||||||||| || |  ||| || |||||||||||    
T  33067286 ttatctactgacataagcacttgtaagactgattgggagagcttatggcaacagtttaggaaatgtccataaa 33067214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 30987961 - 30988012
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30987961 ctgtttgagagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 582
Target Start/End: Complemental strand, 43709403 - 43709309
Alignment:
Q  490 cttatttgagcttatctactgagataagcaca--tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||| || || | |||||  ||| ||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  43709403 cttatttgagcttatctattgtgacatgcacacttatgagagtgtttgggtgagcttatggaaataacttatgacatgtctataagctattttca 43709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 12361335 - 12361238
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagag--cttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||||| |||||||||||| ||||| || | | ||||| ||||||||||  ||||| |||||| |||||||||||||||||| || |||||||    
T  12361335 gacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgttttcaa 12361238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 566
Target Start/End: Original strand, 30191072 - 30191148
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||| ||||||| ||  |||||||| | | |||||||||| ||||||||||||||| ||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 31875564 - 31875619
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| | ||||||||    
T  31875564 actgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaa 31875619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 528 - 582
Target Start/End: Original strand, 4055585 - 4055639
Alignment:
Q  528 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||    
T  4055585 actgtttgggagagtttatagaaataacttatgacatgtccataaactgttttca 4055639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 8558760 - 8558707
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||    
T  8558760 ctgtttgggagagcttatggaaacaacttgtgacatgtccatcaactattttca 8558707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 570
Target Start/End: Complemental strand, 21130748 - 21130671
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    |||||||||||| | |||| ||||  || | | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  21130748 atttgagcttatgtgctgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccat 21130671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 14949969 - 14949913
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| || ||||||    
T  14949969 agactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttca 14949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 4560643 - 4560564
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    |||||||||||||||||||| ||| |||||||| | | ||  ||||||  ||| |||||||||||||||||| |||||||    
T  4560643 gacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtc 4560564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 24326167 - 24326109
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    ||||||||||||||||||  |||||||| | | |||||||||| |||||||||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaa 24326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 5069836 - 5069754
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||||||||| | ||  || ||  |||||||||||||||||||||||||| | ||||| |||||| |||||    
T  5069836 gacttatttgtgcttatctactgacagaatgacgta--agactgtttgagagagcttatggaaacatcttataacatgttcataa 5069754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 6509273 - 6509326
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||| |||| | ||||||||||| | ||||||||||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttca 6509326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 9700141 - 9700048
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||||||   |||| ||| | | ||||| ||||||||||||| || ||  || ||||||||||||||||| || ||||||    
T  9700141 acttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttca 9700048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 525 - 566
Target Start/End: Complemental strand, 37461246 - 37461205
Alignment:
Q  525 aagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  37461246 aagactgtatgagagagtttatggaaataacttatgacatgt 37461205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 569
Target Start/End: Original strand, 39551138 - 39551219
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    |||||||||||| |||||||| || |||||||  | | | |||||||| ||||  ||||||||| |||||||||||||||||    
T  39551138 gacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtcca 39551219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 568
Target Start/End: Complemental strand, 7008739 - 7008660
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||||||||||| ||||||||||  |||||||| | | |||| ||| |||||||||||| |||| ||| ||||||||||||    
T  7008739 gacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttatagaaacaacctatgacatgtcc 7008660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 544
Target Start/End: Original strand, 11059658 - 11059714
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagctt 544  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||| || ||||||||    
T  11059658 gacttatgtgagcttatctaatgacataagcacttataagactgtctgggagagctt 11059714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 40071890 - 40071806
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||| ||||||||||||| ||   ||| | |||| | ||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  40071890 gacttctttgagcttatctcctaccatatgaacatgtgagagtgtttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 539
Target Start/End: Original strand, 3634613 - 3634664
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagag 539  Q
    ||||||||||||||||||| |||| ||| |||| | ||||||||||||||||    
T  3634613 gacttatttgagcttatctgctgacatatgcacttgtaagactgtttgagag 3634664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 4511178 - 4511075
Alignment:
Q  479 gtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatt 578  Q
    |||| ||||||||| ||| |||||||||||||  |||||||| | | ||||| || || ||| |||||| ||| |||||| |||||| || ||| |||||    
T  4511178 gtttggaccgacttgttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctatt 4511079  T
Q  579 ttca 582  Q
    ||||    
T  4511078 ttca 4511075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 572
Target Start/End: Original strand, 11569395 - 11569470
Alignment:
Q  497 gagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| |||  |||| ||| | | ||||||||| |||||||||||||||| | |||||||||||| |||||    
T  11569395 gagcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataa 11569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 583
Target Start/End: Complemental strand, 27646009 - 27645950
Alignment:
Q  524 taagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||| ||||||||||||||||| | | |||||||||||| || |||| ||||||||||    
T  27646009 taagaccgtttgagagagcttatgcatacaacttatgacatatctataagctattttcaa 27645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 43368629 - 43368724
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||||| |||||||||| | |||||||  | | |||||| |||  | |||||||| ||| |||||||||||||| ||| | ||||||||||    
T  43368629 gacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgttcattagctattttcaa 43368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 572
Target Start/End: Original strand, 9540967 - 9541009
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||| ||||||||||||||| | ||||||||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccataa 9541009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 572
Target Start/End: Complemental strand, 9572973 - 9572927
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| |||| |||| | ||||||||||||||||||||||||    
T  9572973 agactgtttgtgagaacttacgaaaataacttatgacatgtccataa 9572927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 561
Target Start/End: Original strand, 18931230 - 18931300
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 561  Q
    |||||||||||||||||  || ||||||||  |  ||||||||| |||||||||||||||  |||||||||    
T  18931230 ttatttgagcttatctatagacataagcactcaagagactgtttaagagagcttatggaagaaacttatga 18931300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 563
Target Start/End: Original strand, 25881350 - 25881419
Alignment:
Q  494 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    |||||| ||||||||||| ||||| || | | ||||||||||| ||||||||  |||| |||||||||||    
T  25881350 tttgagtttatctactgacataagtacttgtgagactgtttgaaagagcttagagaaacaacttatgaca 25881419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 581
Target Start/End: Original strand, 29168642 - 29168687
Alignment:
Q  536 agagagcttatggaaataacttatgacatgtccataaactattttc 581  Q
    |||||||||||| ||| | |||||||||||||||||| ||||||||    
T  29168642 agagagcttatgaaaacagcttatgacatgtccataagctattttc 29168687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 37740405 - 37740449
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  37740405 gagagtttatggaaacaacttatgacatgtccat-aactattttca 37740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 4764035 - 4763951
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| |||||| |||   |||||||| ||| ||||| ||| ||||||||| || ||| | || |||||||||||||||    
T  4764035 gacttatttgaacttatccactagcataagcacctatgagactatttaagagagcttttgaaaacatctaatgacatgtccataa 4763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 6950463 - 6950379
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||| ||||||||||  |||| ||  | | ||| |||||| ||||||||||| ||| ||| ||||||||||| ||||    
T  6950463 gacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataa 6950379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 566
Target Start/End: Complemental strand, 11376842 - 11376766
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||||||||||| |||||  | | | ||||| |||| |||| |||||| ||||| ||| ||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacatgt 11376766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 578
Target Start/End: Complemental strand, 11415293 - 11415205
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatt 578  Q
    |||||||| |||||| |||| | ||||| || | | ||| ||||| |||||| ||||||||| | ||||| |||||||||||| |||||    
T  11415293 cttatttgtgcttatttactaacataagtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccataagctatt 11415205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 544
Target Start/End: Original strand, 14926911 - 14926967
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagctt 544  Q
    ||||||||||| ||||| |||||  |||||||| | | |||||||||||||||||||    
T  14926911 gacttatttgaacttatttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 572
Target Start/End: Original strand, 25869251 - 25869279
Alignment:
Q  544 tatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||||||||||    
T  25869251 tatggaaataacttatgacatgtccataa 25869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 569
Target Start/End: Complemental strand, 26410408 - 26410340
Alignment:
Q  501 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||| ||||| |||||||| | | |||||| ||| ||||||||||||||| | || ||||||||||||    
T  26410408 ttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 26479926 - 26479842
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||| |||||||||| ||| | ||| || | | | ||| |||| ||||||||||||||| |||||||| |||||| ||||    
T  26479926 gacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtctataa 26479842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 29262858 - 29262898
Alignment:
Q  543 ttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||||| |||||||||||||| ||||| ||||||||||    
T  29262858 ttatggaaacaacttatgacatgttcataagctattttcaa 29262898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 530 - 566
Target Start/End: Original strand, 30600320 - 30600356
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||||||||||| |||| |||||||||    
T  30600320 tgtttgagagagcttatggaaacaactcatgacatgt 30600356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 32156971 - 32157011
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||| | ||||||||||||||||| ||||||    
T  32156971 agactgtttgagagggtttatggaaataacttattacatgt 32157011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 566
Target Start/End: Original strand, 44865497 - 44865573
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||| |||||||||||||||  |||||||| | ||| |||| ||  ||||||||||| |||| | |||||||||||    
T  44865497 cttatctgagcttatctactggtataagcacttgtaaaactgcttaggagagcttatgaaaatgatttatgacatgt 44865573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 48157049 - 48157143
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||||| ||||||  ||||||  | | |||||||||| |||||||||| |||| |||||||| ||||||||||| || ||||||    
T  48157049 gacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttca 48157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 582
Target Start/End: Original strand, 36598287 - 36598379
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||| |||| ||||||| |||||||  | | ||| |||||||||||||||||||||| | |||||||||||| ||||| || ||||||    
T  36598287 cttatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttca 36598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 1418560 - 1418468
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||||||||||||  |||||||| ||| || ||||||| |||||||||| |||| |  |||   |||||||||||||||||||||    
T  1418560 gacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttatagaaaca--ttacaccatgtccataaactattttca 1418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 567
Target Start/End: Original strand, 39542229 - 39542308
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    |||||||||||| |||||||||   |||||||| |   |||| |||| ||||||||||||||||||||||||||||||||    
T  39542229 gacttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgacatgtc 39542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 33894766 - 33894684
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||| | ||| |||||||| | | |||||||||| ||||||||||| ||| | | ||||||||||||||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataa 33894684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 575
Target Start/End: Complemental strand, 8427151 - 8427067
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    ||||||||||||||||||| | ||||| || | | |||||||||| | |||| |||||||| |||||| ||| ||||||||||||    
T  8427151 ttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaacttacgacgtgtccataaact 8427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 23214996 - 23214912
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| ||||||||||   |||| ||| ||| |||||||||||||||  ||||| ||| |||||||||||| |||||||    
T  23214996 gacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataa 23214912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 580
Target Start/End: Original strand, 27626052 - 27626144
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||| ||| ||||||||||||||  | ||| | | | ||| ||||||||| |||||||||||| | ||||||||||||||||||||| ||||    
T  27626052 gacttgtttcagcttatctactgacgtcagctcttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgtttt 27626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 44808261 - 44808205
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||| || ||||||    
T  44808261 agactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttca 44808205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 570
Target Start/End: Original strand, 30748966 - 30749045
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    ||||||||||||||||||||| ||||||  || | ||||||||||||||| |||||| ||| ||  ||| ||||||||||    
T  30748966 ttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaatctataacatgtccat 30749045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 579
Target Start/End: Complemental strand, 5269578 - 5269536
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataaactattt 579  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  5269578 gagagcttatggaaatagcttacgacatgtccataaactattt 5269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 566
Target Start/End: Original strand, 25670515 - 25670593
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||| ||||||||||||| ||| |||||| | | | ||||||||||||| | |||||| ||| ||||||||||||||    
T  25670515 gacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 30751659 - 30751566
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| | |||||||||||| |||||||| | |  ||||||||| |||||||||| |||| |  ||||  |||||||||||||| ||||||    
T  30751659 acttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacagtttatagcatgtccataaactgttttca 30751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 583
Target Start/End: Complemental strand, 45078413 - 45078324
Alignment:
Q  494 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||| ||||||||||| |||||||| | |  ||| |||   |||| ||||| ||||||||||||||||||||||||| || |||||||    
T  45078413 tttgagtttatctactgatataagcacttgtgtgacagttcaggagaacttatagaaataacttatgacatgtccataagctgttttcaa 45078324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 572
Target Start/End: Complemental strand, 24048680 - 24048599
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| ||||||||||| ||||| || || |||||||||||  ||||||||||  | || |||||| |||||||||||    
T  24048680 acttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatg--attagcttatgtcatgtccataa 24048599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 564
Target Start/End: Complemental strand, 31341276 - 31341200
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    ||||||||||||||| ||||||   |||| ||| | |||||||||||| ||||| ||||||||| |||| |||||||    
T  31341276 gacttatttgagcttttctacttgcataaacacttttaagactgtttgggagagtttatggaaacaactaatgacat 31341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 39551477 - 39551561
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||| || |||||| | ||||  || ||||| | ||| ||| |||| ||||||||| ||||||||||||||||||||    
T  39551477 gacttatttgagtttttctacttacataatgacttataaaattgtctgaaagaggttatggaaacaacttatgacatgtccataa 39551561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 47427275 - 47427323
Alignment:
Q  531 gtttgagagagcttatggaaataacttatgacatgtccataaactattt 579  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctattt 47427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 34754739 - 34754814
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    ||||| |||||||||||||| ||| | || ||| ||| |||||||||||||||||||| | ||| | |||||||||    
T  34754739 gacttgtttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgaca 34754814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 538 - 573
Target Start/End: Original strand, 44989908 - 44989943
Alignment:
Q  538 agagcttatggaaataacttatgacatgtccataaa 573  Q
    |||||||||||||||| |||||||||||||||||||    
T  44989908 agagcttatggaaatagcttatgacatgtccataaa 44989943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 566
Target Start/End: Original strand, 3500940 - 3500974
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgt 566  Q
    |||| ||||||||||||||||||||||||||||||    
T  3500940 tttgtgagagcttatggaaataacttatgacatgt 3500974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 3836614 - 3836688
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    |||||||||||||||||||||   ||||||| | | | |||||||| |||| |||||| ||||| ||||||||||    
T  3836614 cttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 12234818 - 12234912
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||| ||||||||||||||||  || ||||| | | |||||| |||  | ||||||| |||| ||||||||||||||| |||| || ||||||    
T  12234818 gacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttttca 12234912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 572
Target Start/End: Complemental strand, 36538007 - 36537965
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| |||||||||| |||||||||||||| |||||    
T  36538007 tgtttgagagaacttatggaaacaacttatgacatgttcataa 36537965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 572
Target Start/End: Complemental strand, 39360126 - 39360080
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  39360126 agactgtttgatagagtttatggaaacaacttatgacatatccataa 39360080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 568
Target Start/End: Original strand, 2727290 - 2727367
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||||||| |||||||||||| |||||||| | | |   |||||||||||||||||| |||||  ||| |||||||||    
T  2727290 ttatttgaacttatctactgacataagcacgtgtcaatttgtttgagagagcttatgaaaataggttacgacatgtcc 2727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 582
Target Start/End: Original strand, 12834916 - 12834985
Alignment:
Q  513 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||| | | |||||| |||  |||| ||||||||| | ||||||||||||||||||||| ||||||    
T  12834916 ataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttca 12834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 575
Target Start/End: Original strand, 20547321 - 20547406
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    ||||||| || ||||||| ||| |||| ||| | | | |||||||||||||||||||||| | | | ||||||||||| |||||||    
T  20547321 cttattttagtttatctaatgacataaacacttgtgatactgtttgagagagcttatggagacagcctatgacatgtcgataaact 20547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 25422429 - 25422380
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    |||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  25422429 agactgtttgggagagcttatggaaacaccttatgacatgtttataaact 25422380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 28727693 - 28727770
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||||||||||||||  |||  |||| || |   ||||||||||||||||||||||||||   ||||||||||||    
T  28727693 acttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 29290420 - 29290379
Alignment:
Q  542 cttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||| |||||||||||||||||||| || |||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttcaa 29290379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 33645937 - 33645974
Alignment:
Q  535 gagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataa 33645974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 572
Target Start/End: Original strand, 39568308 - 39568337
Alignment:
Q  543 ttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||||||||||||    
T  39568308 ttatggaaataacttatgacatgtccataa 39568337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 583
Target Start/End: Complemental strand, 44687021 - 44686976
Alignment:
Q  538 agagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||||||| |||||||||||||||||| | || |||||||    
T  44687021 agagcttatggaaacaacttatgacatgtccatgagctgttttcaa 44686976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 566
Target Start/End: Complemental strand, 8094445 - 8094369
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||||||||||||||||   |||||||| | | ||||| |||||||||  ||||| ||| | ||||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgt 8094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 580
Target Start/End: Original strand, 22387837 - 22387917
Alignment:
Q  500 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||| |||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||| |||||  ||||||| ||||    
T  22387837 cttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttt 22387917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 547
Target Start/End: Complemental strand, 25014087 - 25014031
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    ||||||||  ||||||||||| | |||||| | |||||||||||||||||| |||||    
T  25014087 ttatttgaatttatctactgacacaagcacttgtaagactgtttgagagagtttatg 25014031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 564
Target Start/End: Original strand, 27121527 - 27121599
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    ||||||||||||| |||| | |||||||  | | ||| |||||| ||||| ||||||||||| ||||||||||    
T  27121527 tatttgagcttatttactaatataagcatctgtgagattgtttgggagagtttatggaaatagcttatgacat 27121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 564
Target Start/End: Complemental strand, 31149737 - 31149705
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacat 564  Q
    |||||||||||||||| ||||||||||||||||    
T  31149737 tttgagagagcttatgaaaataacttatgacat 31149705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 564
Target Start/End: Complemental strand, 31168029 - 31167997
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacat 564  Q
    |||||||||||||||| ||||||||||||||||    
T  31168029 tttgagagagcttatgaaaataacttatgacat 31167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 575
Target Start/End: Original strand, 21872225 - 21872311
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    |||||||||| |||||||||||| |||||||| | | ||||||||||  | ||||| || ||||| |||||||||||||||||||||    
T  21872225 acttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaact 21872311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 580
Target Start/End: Original strand, 25182919 - 25183008
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    |||||||||||||||| |||||   ||||| || | | |||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||    
T  25182919 gacttatttgagcttacctact---ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccataagctatttt 25183008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 22667542 - 22667481
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22667481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 22724181 - 22724120
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 478 - 583
Target Start/End: Original strand, 52323813 - 52323918
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 577  Q
    ||||||||  |||||| ||||| | ||||||| | |||||||| |  ||||||||||| |||||||||| ||||||| |||||||| |||||||| || |    
T  52323813 tgtttagattgacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgt 52323912  T
Q  578 tttcaa 583  Q
    ||||||    
T  52323913 tttcaa 52323918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 582
Target Start/End: Complemental strand, 24624349 - 24624257
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||| |||| |||||||||| | || ||||| | ||||||||||||  |||||||||| ||| | ||||||||||||||||||||| ||||||    
T  24624349 cttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttca 24624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 551
Target Start/End: Original strand, 11041160 - 11041218
Alignment:
Q  493 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    ||||||||||||||||| |||||||||| | |  |||||||||||||||||||||||||    
T  11041160 atttgagcttatctactaagataagcacttgtgggactgtttgagagagcttatggaaa 11041218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 492 - 582
Target Start/End: Original strand, 33965421 - 33965511
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||||||||  ||| ||||| | |||||||||  |||| |||||||||||| | ||||||||| ||||||  ||||||||    
T  33965421 tatttgagcttatctactgacttaaacacatgtgagactgtttaggagaccttatggaaatagcatatgacatgcccataagttattttca 33965511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 572
Target Start/End: Complemental strand, 37273237 - 37273191
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  37273237 agactgtttgggagagcttatggaaacaacttatgacatgtccataa 37273191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 559
Target Start/End: Complemental strand, 50211875 - 50211805
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 559  Q
    |||||||| |||||||||||| | |||||||| | ||||||||||||||||| |||||| ||| |||||||    
T  50211875 acttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 36646300 - 36646405
Alignment:
Q  477 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaacta 576  Q
    |||||| || |||||||||| ||| |||||| ||  ||| |||| | ||||||| |||| |||||||||||||||  ||||||| ||||||||||| ||     
T  36646300 ttgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctg 36646399  T
Q  577 ttttca 582  Q
    ||||||    
T  36646400 ttttca 36646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 572
Target Start/End: Complemental strand, 41724350 - 41724269
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| |||||||||||| ||||| || | | |||| ||||| || | |||||||||| ||||||||||||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccataa 41724269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 567
Target Start/End: Original strand, 11039707 - 11039786
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 567  Q
    ||||||| |||||||| ||||| |||||| ||||| |||| |||||||||||||| | |||||| |||| || |||||||    
T  11039707 gacttatctgagcttagctactaagataaacacatgtaaggctgtttgagagagcatttggaaacaactaataacatgtc 11039786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 583
Target Start/End: Original strand, 49465909 - 49465960
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||| |||||||||| |||| |||||||||||||||||| ||||||||||||    
T  49465909 tttgtgagagcttatagaaacaacttatgacatgtccatgaactattttcaa 49465960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 583
Target Start/End: Original strand, 20192548 - 20192630
Alignment:
Q  501 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    ||||||| ||| |||||||| | | | ||||| ||||||||||||| |||| | |||||||||||||||||| || |||||||    
T  20192548 ttatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaa 20192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 572
Target Start/End: Complemental strand, 24281197 - 24281104
Alignment:
Q  479 gtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||  ||||||||||||  |||||||||  |||||||| | |  || |||||||||||||||||| ||| ||||||||| || |||||||    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataa 24281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 565
Target Start/End: Original strand, 40880877 - 40880954
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 565  Q
    ||||||||| |||||||||| ||| || | || |  | |||||||||||||||||||||| ||| |||||||||||||    
T  40880877 gacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 40880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 526 - 570
Target Start/End: Complemental strand, 1810080 - 1810036
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  1810080 agactatttgagagagcttacggaaacaacttatgacatgtccat 1810036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 24158447 - 24158515
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataactta 558  Q
    ||||||| |||||||||||||| ||||| || | | | |||||||| ||||||||||||||| ||||||    
T  24158447 cttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 563
Target Start/End: Complemental strand, 27793010 - 27792938
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 563  Q
    ||||||||||||||||| ||| |||| ||||  | ||||||||||| |||| ||||||||||| ||| |||||    
T  27793010 ttatttgagcttatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgaca 27792938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 36200237 - 36200153
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||| ||| |  ||||| | | ||| |||| ||||||| || || ||| ||||||||||||||||||||    
T  36200237 gacttatttgagcttatctaatgaaaacagcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccataa 36200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 572
Target Start/End: Complemental strand, 37155138 - 37155058
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37155138 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37155058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 572
Target Start/End: Complemental strand, 37200493 - 37200413
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37200493 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37200413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 566
Target Start/End: Complemental strand, 50004787 - 50004715
Alignment:
Q  495 ttgagcttatctactgagataagcacatataagactgtttgagagagc-ttatggaaataacttatgacatgt 566  Q
    ||||| |||| |||||| |||||||  | |||||||||||||||| || ||||||||| ||||||||||||||    
T  50004787 ttgagtttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgt 50004715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 566
Target Start/End: Original strand, 2606278 - 2606317
Alignment:
Q  527 gactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  2606278 gactgtttgagagatcttatggaaacaacttatgacatgt 2606317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 566
Target Start/End: Original strand, 10540425 - 10540500
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    ||||||||| ||||||| | | |||||||| ||| ||||| |||  ||||||||||||||| || |||||||||||    
T  10540425 ttatttgagtttatctattcacataagcacttatcagactctttaggagagcttatggaaacaatttatgacatgt 10540500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 14598523 - 14598566
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||    
T  14598523 ctgtttgggggagtttatggaaataacttatgacatgtccataa 14598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 42817192 - 42817235
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||||| | | ||||||||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccataa 42817235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 572
Target Start/End: Original strand, 11039306 - 11039352
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||    
T  11039306 agactgtttgaaagagcttatggaaacatattatgacatgtccataa 11039352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 572
Target Start/End: Complemental strand, 21574593 - 21574547
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataa 21574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 572
Target Start/End: Complemental strand, 31403117 - 31403075
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  31403117 tgtttgagagagcttatggaaacaacttattacatgtctataa 31403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 572
Target Start/End: Original strand, 49772635 - 49772681
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  49772635 agactgtttaggagagcttatggaaacaacttatgagatgtccataa 49772681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 547
Target Start/End: Original strand, 25699129 - 25699186
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    |||||||||| ||||||| ||| |||||||| ||| |||||  |||||||||||||||    
T  25699129 cttatttgagtttatctattgacataagcacttatgagacttcttgagagagcttatg 25699186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 53735913 - 53735982
Alignment:
Q  500 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||| |||||| |||| |||  || ||| ||||||||||| ||||| |||| |||||||||||||||||    
T  53735913 cttatttactgacataaacactaatgagattgtttgagagaacttattgaaacaacttatgacatgtcca 53735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 568
Target Start/End: Complemental strand, 1395780 - 1395700
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 568  Q
    |||||||||||||||||||  |||  ||||||| |   ||||||||||||||||||||   ||| |||||| |||||||||    
T  1395780 gacttatttgagcttatcttatgacgtaagcacttgcgagactgtttgagagagcttacaaaaacaacttaagacatgtcc 1395700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 2923619 - 2923535
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| ||||||||||| ||| ||||| || |  |||||||||||  ||| ||||| |||| ||||||  ||||||||||||    
T  2923619 gacttattcgagcttatctattgacataagtacttgaaagactgtttggaagaacttatagaaacaacttactacatgtccataa 2923535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 11040543 - 11040627
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||| |||||||||||||| | |||| ||| | ||| |||| |||||||||| |||| ||| |   ||||||||||||||||    
T  11040543 gacttatatgagcttatctactcacataaacacttctaatactgattgagagagcatatgaaaacagagtatgacatgtccataa 11040627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 547
Target Start/End: Original strand, 20210860 - 20210916
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    ||||||||| ||||||||||| |||| ||| | | ||||||||||||||| ||||||    
T  20210860 ttatttgaggttatctactgacataaccacttgtgagactgtttgagagatcttatg 20210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 565
Target Start/End: Original strand, 24625272 - 24625348
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 565  Q
    |||| ||||||||||| |||||  |||||||| | |||| ||| ||||||||||||||  ||| || ||||||||||    
T  24625272 acttgtttgagcttatttactggcataagcacttgtaaggctgattgagagagcttattaaaacaatttatgacatg 24625348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 27795944 - 27796000
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat 546  Q
    |||||||||||||||||||||  |||||||| | | | ||||||| |||||||||||    
T  27795944 cttatttgagcttatctactggcataagcacttgtgaaactgtttaagagagcttat 27796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 29113565 - 29113509
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||||||||  |||| ||||||| ||||| | |||| |||||||||    
T  29113565 agactgtttgagagagcttacagaaacaacttataacatgcctataagctattttca 29113509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 530 - 582
Target Start/End: Complemental strand, 31010501 - 31010449
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||| || ||||||| |||| |||||||||||||||||||| || ||||||    
T  31010501 tgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttca 31010449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 47584595 - 47584523
Alignment:
Q  484 gaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataact 556  Q
    |||||||| |||||| | |||||| ||| |||||||| | | ||||| |||||||||||||||| ||| ||||    
T  47584595 gaccgactcatttgaacctatctattgacataagcacttgtgagactatttgagagagcttatgaaaagaact 47584523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 580
Target Start/End: Complemental strand, 1662712 - 1662622
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    ||||||||||||||||||||   ||||| ||||   ||||| |||| ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatgtccataaaatatttt 1662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 569
Target Start/End: Original strand, 23373242 - 23373323
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 569  Q
    ||||||||||| ||| |||||||| |||||||| | | ||| |||||| |||||||||| |||| |||||||||||||||||    
T  23373242 gacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 582
Target Start/End: Complemental strand, 15581393 - 15581301
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||| |||||||||||||| |||||||| | | ||| ||||||  |||||| ||||||| ||||||||||||||| |||| || ||||||    
T  15581393 cttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttca 15581301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 573
Target Start/End: Original strand, 4549472 - 4549555
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    |||||||||| ||||||||||  |||||||  | | |||||||||| |||||||||| |||| ||||||||||||||| |||||    
T  4549472 cttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaa 4549555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 570
Target Start/End: Original strand, 38867799 - 38867842
Alignment:
Q  527 gactgtttgagagagcttatggaaataacttatgacatgtccat 570  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38867799 gactgtttgagagagcttatggaaataacttatgatatgtccat 38867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 498 - 572
Target Start/End: Complemental strand, 44422830 - 44422756
Alignment:
Q  498 agcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||| ||||| ||| | | ||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  44422830 agcttatctactgggataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataa 44422756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 11560535 - 11560584
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataaactattttc 581  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  11560535 tttgatagagcttatggaaacaacttatgacatatccataaactattttc 11560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 5591896 - 5591979
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||||  |||||||  | || ||||||||||||||||||||| ||| | ||||||||| || |||||    
T  5591896 gacttatttgagcttatctactggtataagcatgtgta-gactgtttgagagagcttatgaaaacagcttatgacacgtgcataa 5591979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 492 - 572
Target Start/End: Original strand, 32515374 - 32515454
Alignment:
Q  492 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||| ||||||||| | |||||||| | | |||||||||| ||||||||||||||| | | ||||||||||| ||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataa 32515454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 571
Target Start/End: Original strand, 4033946 - 4034029
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    |||| |||||| ||| |||||||  |||| ||| | | ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  4033946 gactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaataacttatgacttgtccata 4034029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 525 - 572
Target Start/End: Complemental strand, 15579586 - 15579539
Alignment:
Q  525 aagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15579586 aagactgtttgggagagcttgtggaaacaacttatgacatgtccataa 15579539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 27807256 - 27807197
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 547  Q
    ||||||||||| ||| |||||||| |||||||  | ||||||||||||||||||||||||    
T  27807256 gacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatg 27807197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 30259415 - 30259510
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||||||||||| ||| |||| |  |||| ||||| |||| |||||||| ||||||||| |||| |||||| |||||||| ||||| | |||||||    
T  30259415 gacttatttgagtttacctaccggcataaacacatttaaggctgtttgaaagagcttatagaaacaacttacgacatgtcaataaattgttttcaa 30259510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 582
Target Start/End: Original strand, 3597210 - 3597304
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||| ||||||| ||| |||| ||| | | ||||||||||  |||| | ||  ||||||||||||||||| |||||| |||||||||    
T  3597210 gacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccataagctattttca 3597304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 566
Target Start/End: Complemental strand, 28467574 - 28467496
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||||||||||| |||| ||||   || ||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||    
T  28467574 gacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataacttatgacatgt 28467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 43420397 - 43420315
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||| || |||| ||| | | |||||| ||| |||| |||||||||| | |||||||||||| |||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgttcataa 43420315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 580
Target Start/End: Original strand, 14737658 - 14737747
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 580  Q
    |||||||||||||| ||||   |||||||| | | |||||||||| || | ||| || ||||||||||| |||||||||||| |||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataacatgtccataagctatttt 14737747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 577
Target Start/End: Original strand, 17631079 - 17631120
Alignment:
Q  536 agagagcttatggaaataacttatgacatgtccataaactat 577  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  17631079 agagagcttatggaaacaacttatgacatgtccataagctat 17631120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 571
Target Start/End: Complemental strand, 23407534 - 23407489
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  23407534 agactgtctgagagagcttattgaaatagcttatgacatgtccata 23407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 26679492 - 26679419
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    ||||||||||||||||||||  || |||||   |||||| ||||| ||||||||||||||| | ||||||||||    
T  26679492 ttatttgagcttatctactgtcattagcactggtaagacagtttgcgagagcttatggaaaaatcttatgacat 26679419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 45327720 - 45327627
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||| ||||||||||||||  |  ||||| | | |||||  ||| | ||||||||||||| ||||||||||||||||||||| | ||||||    
T  45327720 acttattggagcttatctactggcacgagcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaattgttttca 45327627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 571
Target Start/End: Original strand, 49692019 - 49692064
Alignment:
Q  526 agactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  49692019 agactgtttgagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 10199337 - 10199421
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||| | |||||||| | | | ||| |||| |||| || ||| ||||| |||||||||||| |||||    
T  10199337 gacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataa 10199421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 12564428 - 12564512
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||| |||||| |||||||| | |  ||||||||| ||||||||| | | ||| ||||||||| ||| ||||    
T  12564428 gacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataa 12564512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 17628735 - 17628646
Alignment:
Q  489 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||| ||||||| ||||||| | |||||| | | |||||||| |||    |||||||||| |||||||||||||||||||| || ||||||    
T  17628735 acttattggagcttacctactgacacaagcacttgtgagactgttggag----cttatggaaacaacttatgacatgtccataagctgttttca 17628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 27140619 - 27140535
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||| |||||||||||| ||| |||| ||  | |||| || |||||||||| ||| ||||| | ||||||||||||||||||    
T  27140619 gacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataa 27140535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 582
Target Start/End: Original strand, 31517671 - 31517763
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||| |||||  |||||||| | | |||||||||| |||| |||||  ||| |||| ||||||||| ||||| || ||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttca 31517763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 51929391 - 51929467
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 564  Q
    ||||| |||||||||||||||||| |||||||| | | | ||||||| ||||| |||||| ||| | ||||||||||    
T  51929391 gacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 551
Target Start/End: Complemental strand, 6279540 - 6279477
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 551  Q
    ||||||||| |||||| ||||||| |||||||| | |  | |||||||||||||||||||||||    
T  6279540 gacttatttcagcttaactactgacataagcacttgtgtggctgtttgagagagcttatggaaa 6279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 16980944 - 16980857
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 575  Q
    ||||||||||| ||||| |||  | ||||| || | | ||||| |||||||||||||||||||| |||||| ||||| | ||||||||    
T  16980944 gacttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaacttacgacattttcataaact 16980857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 29723630 - 29723535
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 583  Q
    |||| |||||||||||| ||||   |||||||| | | | || |||||| ||| || ||||||| | ||||||||||||||||||||| |||||||    
T  29723630 gactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgttttcaa 29723535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 33204313 - 33204352
Alignment:
Q  478 tgtttagaccgacttatttgagcttatctactgagataag 517  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  33204313 tgtttagatcgacttatttgagcttatctactgacataag 33204352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 571
Target Start/End: Complemental strand, 34536299 - 34536216
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    ||||||||||| | |||||| ||| |||| ||| | | |||||||||||||  ||||||| ||| | |||||||||||||||||    
T  34536299 gacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccata 34536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 37941955 - 37941998
Alignment:
Q  529 ctgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||| |||| || |||||||||||||||||    
T  37941955 ctgtttgagagagcttatagaaacaatttatgacatgtccataa 37941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 573
Target Start/End: Original strand, 49521776 - 49521819
Alignment:
Q  530 tgtttgagagagcttatggaaataacttatgacatgtccataaa 573  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||    
T  49521776 tgtttgagagagcttgtggaaacaacttatgacatgttcataaa 49521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 572
Target Start/End: Complemental strand, 4868537 - 4868457
Alignment:
Q  491 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    ||||||||  ||||||| ||| ||| |||| | | |||||||||||||||| |||| |||| ||||||||||||||| ||||    
T  4868537 ttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttat-gaaacaacttatgacatgtcaataa 4868457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 561
Target Start/End: Complemental strand, 5157213 - 5157140
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 561  Q
    ||||||||||| ||||||||| || |||| ||| | | | |||||||| |||||||||| |||| |||||||||    
T  5157213 gacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 6292646 - 6292601
Alignment:
Q  475 gtttgtttagaccgacttatttgagcttatctactgagataagcac 520  Q
    |||||||| ||  |||||||||||||||||||||||| ||||||||    
T  6292646 gtttgtttggattgacttatttgagcttatctactgacataagcac 6292601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 27145634 - 27145589
Alignment:
Q  537 gagagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    ||||||||||||||| | ||||||||||||||||||  ||||||||    
T  27145634 gagagcttatggaaaaagcttatgacatgtccataagttattttca 27145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 572
Target Start/End: Complemental strand, 6262835 - 6262795
Alignment:
Q  532 tttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||| ||||||||||| ||||||||||||| ||||||||||    
T  6262835 tttgggagagcttatgaaaataacttatgatatgtccataa 6262795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 566
Target Start/End: Complemental strand, 15709988 - 15709912
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 566  Q
    |||| ||||| |||||||||   |||||||| | | |||||||||| |||| |||| ||||||| ||||||||||||    
T  15709988 cttacttgaggttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgacatgt 15709912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 572
Target Start/End: Original strand, 19412574 - 19412610
Alignment:
Q  536 agagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  19412574 agagagtttatggaaacaacttatgacatgtccataa 19412610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 582
Target Start/End: Complemental strand, 27146012 - 27145968
Alignment:
Q  538 agagcttatggaaataacttatgacatgtccataaactattttca 582  Q
    |||||||||||||| | ||||||||||||||||||  ||||||||    
T  27146012 agagcttatggaaacagcttatgacatgtccataagttattttca 27145968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 572
Target Start/End: Complemental strand, 28075845 - 28075761
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 572  Q
    |||||||||||||||||||||| | ||||| || | | || |||||||||  | ||| || ||| |||||||||| |||||||||    
T  28075845 gacttatttgagcttatctactaatataagaacttgtgaggctgtttgagttaacttgtgaaaacaacttatgacgtgtccataa 28075761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 581
Target Start/End: Complemental strand, 43771933 - 43771885
Alignment:
Q  533 ttgagagagcttatggaaataacttatgacatgtccataaactattttc 581  Q
    ||||||||||| ||||||| || ||||||||||||| |||||| |||||    
T  43771933 ttgagagagctcatggaaacaatttatgacatgtccgtaaactgttttc 43771885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 571
Target Start/End: Complemental strand, 48282263 - 48282182
Alignment:
Q  488 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 571  Q
    |||| ||||||||||| ||||||  ||||| || | | |||||  ||||||||||||||| |||||  ||||||||||||||||    
T  48282263 gactaatttgagcttacctactggcataagtacctgtgagact--ttgagagagcttatgaaaataggttatgacatgtccata 48282182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 27711 - 27640
Alignment:
Q  494 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 565  Q
    |||||||| ||||||||| ||| | || | | |||||||||| ||||||||||||||||| |||||||||||    
T  27711 tttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatg 27640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 560
Target Start/End: Original strand, 4154 - 4224
Alignment:
Q  490 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatg 560  Q
    ||||||||||||| |||||||| |||||||| | | ||  |||||| ||||| ||||||||| ||||||||    
T  4154 cttatttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatg 4224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 572
Target Start/End: Complemental strand, 38678 - 38649
Alignment:
Q  543 ttatggaaataacttatgacatgtccataa 572  Q
    ||||||||||||||||||||||||||||||    
T  38678 ttatggaaataacttatgacatgtccataa 38649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University