View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9206_low_20 (Length: 239)

Name: NF9206_low_20
Description: NF9206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9206_low_20
NF9206_low_20
[»] chr7 (45 HSPs)
chr7 (1-223)||(5174448-5174670)
chr7 (56-116)||(6269374-6269434)
chr7 (63-116)||(18111615-18111668)
chr7 (56-116)||(41430155-41430215)
chr7 (56-116)||(42584810-42584870)
chr7 (56-193)||(35822902-35823038)
chr7 (56-114)||(46829487-46829545)
chr7 (56-116)||(34108858-34108918)
chr7 (56-160)||(41189502-41189606)
chr7 (56-114)||(1471296-1471354)
chr7 (56-193)||(40854582-40854718)
chr7 (56-116)||(9363395-9363455)
chr7 (64-116)||(24532946-24532998)
chr7 (56-116)||(26018048-26018108)
chr7 (56-116)||(28081786-28081845)
chr7 (56-116)||(33212050-33212109)
chr7 (56-116)||(44496806-44496866)
chr7 (56-116)||(47012573-47012633)
chr7 (56-116)||(47644713-47644772)
chr7 (83-179)||(3062365-3062460)
chr7 (61-116)||(29855239-29855294)
chr7 (56-103)||(36352603-36352650)
chr7 (56-114)||(10014961-10015018)
chr7 (68-114)||(35586778-35586824)
chr7 (55-116)||(3143958-3144017)
chr7 (84-113)||(31274547-31274576)
chr7 (55-116)||(41458904-41458964)
chr7 (56-116)||(2790185-2790244)
chr7 (56-116)||(7295458-7295518)
chr7 (56-103)||(17479012-17479060)
chr7 (56-103)||(17483447-17483495)
chr7 (56-116)||(17500705-17500764)
chr7 (56-116)||(17552450-17552509)
chr7 (56-103)||(17569719-17569767)
chr7 (56-103)||(17574154-17574202)
chr7 (56-116)||(23034063-23034123)
chr7 (78-114)||(29723932-29723968)
chr7 (56-116)||(31398132-31398191)
chr7 (80-116)||(34978328-34978364)
chr7 (78-114)||(35452578-35452614)
chr7 (56-116)||(38259071-38259131)
chr7 (56-116)||(38340386-38340446)
chr7 (56-116)||(41815153-41815212)
chr7 (56-116)||(42598211-42598271)
chr7 (56-116)||(43079636-43079695)
[»] chr6 (19 HSPs)
chr6 (68-223)||(13422988-13423142)
chr6 (61-116)||(28630111-28630166)
chr6 (56-116)||(1376372-1376432)
chr6 (56-116)||(1384120-1384180)
chr6 (56-116)||(16368050-16368110)
chr6 (62-116)||(16337926-16337980)
chr6 (56-114)||(34570600-34570658)
chr6 (70-116)||(33651042-33651088)
chr6 (56-109)||(27102123-27102175)
chr6 (56-109)||(27143945-27143997)
chr6 (56-116)||(16743270-16743329)
chr6 (56-116)||(25127836-25127896)
chr6 (66-116)||(21968895-21968945)
chr6 (83-116)||(5028269-5028302)
chr6 (80-116)||(2242025-2242061)
chr6 (80-116)||(2689067-2689103)
chr6 (56-116)||(7693323-7693382)
chr6 (56-116)||(19789080-19789139)
chr6 (68-116)||(20822871-20822919)
[»] chr5 (39 HSPs)
chr5 (56-223)||(4088451-4088617)
chr5 (56-116)||(6758794-6758854)
chr5 (56-114)||(6940155-6940213)
chr5 (56-116)||(40829422-40829482)
chr5 (56-193)||(16690507-16690643)
chr5 (63-116)||(38293362-38293415)
chr5 (56-116)||(22098263-22098323)
chr5 (78-116)||(14051320-14051358)
chr5 (56-114)||(18695326-18695384)
chr5 (55-116)||(8087806-8087866)
chr5 (63-116)||(32510836-32510889)
chr5 (68-116)||(189706-189754)
chr5 (80-160)||(1079911-1079992)
chr5 (66-114)||(8726390-8726437)
chr5 (68-116)||(19481185-19481233)
chr5 (56-116)||(39191838-39191897)
chr5 (69-116)||(19839989-19840036)
chr5 (69-116)||(32912059-32912106)
chr5 (64-115)||(34379469-34379520)
chr5 (78-116)||(3674852-3674890)
chr5 (56-102)||(21012576-21012622)
chr5 (70-116)||(26686903-26686949)
chr5 (70-116)||(26956634-26956680)
chr5 (78-115)||(11954461-11954498)
chr5 (78-115)||(14532534-14532571)
chr5 (56-109)||(31748344-31748397)
chr5 (76-116)||(884469-884509)
chr5 (56-104)||(1293101-1293149)
chr5 (56-116)||(4719658-4719718)
chr5 (83-164)||(6446473-6446554)
chr5 (68-116)||(6517732-6517780)
chr5 (56-112)||(20125397-20125452)
chr5 (56-116)||(20985533-20985592)
chr5 (76-116)||(23929525-23929565)
chr5 (124-223)||(27487963-27488060)
chr5 (56-116)||(31708378-31708437)
chr5 (68-116)||(34124641-34124689)
chr5 (56-116)||(36416066-36416125)
chr5 (56-116)||(40364576-40364636)
[»] chr3 (61 HSPs)
chr3 (62-223)||(52485486-52485646)
chr3 (68-223)||(24095304-24095457)
chr3 (64-116)||(26772384-26772436)
chr3 (56-193)||(1436824-1436960)
chr3 (56-185)||(52963251-52963379)
chr3 (163-223)||(9653380-9653440)
chr3 (64-116)||(26550253-26550305)
chr3 (64-116)||(27168685-27168737)
chr3 (56-116)||(28300294-28300353)
chr3 (56-116)||(28920053-28920113)
chr3 (56-116)||(37894246-37894306)
chr3 (56-116)||(45186555-45186615)
chr3 (54-116)||(21660112-21660174)
chr3 (56-114)||(29573361-29573419)
chr3 (78-116)||(31157681-31157719)
chr3 (56-193)||(52714741-52714877)
chr3 (56-97)||(349435-349476)
chr3 (71-116)||(3953478-3953523)
chr3 (72-116)||(1261090-1261134)
chr3 (78-114)||(4494242-4494278)
chr3 (56-116)||(26452726-26452786)
chr3 (83-223)||(35376979-35377118)
chr3 (80-116)||(36671018-36671054)
chr3 (56-116)||(41369605-41369664)
chr3 (56-116)||(49021719-49021779)
chr3 (56-116)||(51137039-51137099)
chr3 (168-223)||(9644672-9644727)
chr3 (64-115)||(10811151-10811202)
chr3 (55-193)||(54099284-54099421)
chr3 (78-116)||(3521428-3521466)
chr3 (56-193)||(36755978-36756114)
chr3 (83-116)||(3281719-3281752)
chr3 (50-115)||(3648581-3648646)
chr3 (55-116)||(29917027-29917088)
chr3 (55-116)||(29966180-29966241)
chr3 (63-116)||(42672251-42672304)
chr3 (83-116)||(43169757-43169790)
chr3 (56-97)||(51230630-51230671)
chr3 (64-116)||(288741-288793)
chr3 (56-116)||(622464-622523)
chr3 (56-116)||(1295340-1295399)
chr3 (56-116)||(9311048-9311108)
chr3 (64-116)||(14207261-14207313)
chr3 (64-116)||(14215009-14215061)
chr3 (56-116)||(16479640-16479699)
chr3 (80-116)||(20080105-20080141)
chr3 (64-116)||(33939252-33939303)
chr3 (68-112)||(34057960-34058004)
chr3 (64-116)||(34064109-34064160)
chr3 (56-116)||(35425676-35425735)
chr3 (68-116)||(39697225-39697273)
chr3 (80-116)||(42358642-42358678)
chr3 (56-116)||(42424218-42424277)
chr3 (64-116)||(42672838-42672890)
chr3 (56-116)||(43409366-43409425)
chr3 (56-116)||(48353004-48353064)
chr3 (56-116)||(48405418-48405478)
chr3 (56-116)||(49761190-49761249)
chr3 (83-160)||(49761342-49761419)
chr3 (56-116)||(52100269-52100328)
chr3 (68-116)||(55400019-55400067)
[»] chr8 (45 HSPs)
chr8 (64-197)||(43285886-43286018)
chr8 (56-116)||(45405539-45405599)
chr8 (56-193)||(35067168-35067304)
chr8 (56-116)||(42786663-42786723)
chr8 (56-116)||(25830249-25830309)
chr8 (56-116)||(28756543-28756603)
chr8 (64-116)||(33100472-33100524)
chr8 (56-223)||(38675611-38675777)
chr8 (70-116)||(7777183-7777229)
chr8 (56-116)||(67164-67224)
chr8 (56-116)||(12655930-12655990)
chr8 (56-116)||(14548827-14548886)
chr8 (56-116)||(20473787-20473846)
chr8 (163-223)||(36969572-36969632)
chr8 (56-116)||(43715883-43715942)
chr8 (64-116)||(44061733-44061785)
chr8 (68-160)||(4658222-4658314)
chr8 (64-115)||(45405988-45406039)
chr8 (78-116)||(2733018-2733056)
chr8 (56-114)||(6825283-6825340)
chr8 (56-114)||(10344332-10344389)
chr8 (56-114)||(10644807-10644865)
chr8 (78-116)||(10692468-10692506)
chr8 (56-114)||(11089584-11089641)
chr8 (78-116)||(12898933-12898971)
chr8 (56-114)||(22960422-22960480)
chr8 (125-193)||(6972232-6972298)
chr8 (69-110)||(28756682-28756723)
chr8 (83-116)||(37449429-37449462)
chr8 (83-116)||(41541892-41541925)
chr8 (56-116)||(295553-295613)
chr8 (124-184)||(3413129-3413187)
chr8 (70-114)||(5924832-5924875)
chr8 (62-114)||(5925069-5925120)
chr8 (64-116)||(23754710-23754762)
chr8 (64-116)||(25987790-25987842)
chr8 (56-116)||(27630905-27630964)
chr8 (68-116)||(31596968-31597016)
chr8 (56-116)||(33279552-33279612)
chr8 (56-116)||(33863252-33863311)
chr8 (64-116)||(35818953-35819004)
chr8 (56-116)||(36969680-36969740)
chr8 (56-116)||(41304986-41305045)
chr8 (56-116)||(42716328-42716387)
chr8 (84-116)||(42768241-42768273)
[»] chr1 (49 HSPs)
chr1 (56-223)||(49020303-49020467)
chr1 (56-116)||(52437502-52437562)
chr1 (56-116)||(1689399-1689459)
chr1 (56-116)||(21433404-21433464)
chr1 (55-103)||(38114292-38114340)
chr1 (56-114)||(46281444-46281502)
chr1 (56-116)||(30535999-30536059)
chr1 (137-211)||(40699746-40699819)
chr1 (70-223)||(44723382-44723536)
chr1 (56-116)||(11947803-11947863)
chr1 (64-116)||(47642610-47642662)
chr1 (56-116)||(49596243-49596302)
chr1 (64-115)||(4213088-4213139)
chr1 (61-116)||(30744999-30745054)
chr1 (61-116)||(30766450-30766505)
chr1 (56-115)||(49621371-49621429)
chr1 (78-116)||(5771751-5771789)
chr1 (56-114)||(43056724-43056781)
chr1 (56-223)||(49446691-49446861)
chr1 (56-114)||(49699758-49699815)
chr1 (56-114)||(51193137-51193194)
chr1 (83-116)||(16836119-16836152)
chr1 (83-116)||(30735297-30735330)
chr1 (55-116)||(31088188-31088248)
chr1 (64-116)||(649784-649836)
chr1 (56-116)||(2492421-2492481)
chr1 (56-116)||(3919308-3919367)
chr1 (64-116)||(9566964-9567016)
chr1 (68-116)||(10890049-10890097)
chr1 (56-116)||(12999826-12999885)
chr1 (68-116)||(13489682-13489730)
chr1 (56-116)||(15059647-15059707)
chr1 (64-116)||(15470060-15470112)
chr1 (68-116)||(15705065-15705113)
chr1 (56-116)||(27352638-27352697)
chr1 (56-116)||(30439258-30439317)
chr1 (56-116)||(30973560-30973620)
chr1 (56-116)||(33076127-33076187)
chr1 (56-116)||(34157528-34157586)
chr1 (64-116)||(37619560-37619611)
chr1 (56-116)||(44112462-44112521)
chr1 (56-116)||(44641907-44641966)
chr1 (56-116)||(45042269-45042328)
chr1 (56-116)||(47113282-47113341)
chr1 (56-116)||(49931561-49931621)
chr1 (80-116)||(50775160-50775196)
chr1 (80-116)||(52267235-52267271)
chr1 (68-116)||(52362502-52362550)
chr1 (56-116)||(52369115-52369174)
[»] chr2 (51 HSPs)
chr2 (56-112)||(12784406-12784462)
chr2 (56-223)||(45420143-45420309)
chr2 (54-114)||(2842886-2842946)
chr2 (68-116)||(9634439-9634487)
chr2 (56-116)||(14328389-14328449)
chr2 (56-116)||(14499027-14499087)
chr2 (56-116)||(26290854-26290914)
chr2 (168-223)||(9936248-9936303)
chr2 (56-193)||(21738545-21738679)
chr2 (63-116)||(14500895-14500948)
chr2 (56-116)||(24766160-24766220)
chr2 (70-116)||(4657323-4657369)
chr2 (70-116)||(34431830-34431876)
chr2 (66-116)||(42532742-42532792)
chr2 (69-223)||(1415936-1416089)
chr2 (56-193)||(6336260-6336394)
chr2 (55-103)||(1907780-1907828)
chr2 (56-112)||(35334528-35334584)
chr2 (64-116)||(40210071-40210123)
chr2 (64-116)||(41042270-41042321)
chr2 (64-116)||(43057080-43057132)
chr2 (61-179)||(44050028-44050144)
chr2 (56-112)||(45259292-45259348)
chr2 (56-111)||(7502436-7502491)
chr2 (69-116)||(11091362-11091409)
chr2 (64-115)||(19916671-19916722)
chr2 (56-114)||(5031931-5031989)
chr2 (78-116)||(5054638-5054676)
chr2 (80-114)||(6895927-6895961)
chr2 (56-102)||(12070857-12070903)
chr2 (66-116)||(29449229-29449279)
chr2 (82-116)||(31578468-31578502)
chr2 (63-109)||(40358122-40358168)
chr2 (56-114)||(44484662-44484719)
chr2 (68-109)||(9936365-9936406)
chr2 (83-116)||(9990725-9990758)
chr2 (56-113)||(42075366-42075423)
chr2 (83-116)||(42866785-42866818)
chr2 (64-153)||(43487395-43487484)
chr2 (56-116)||(4723574-4723633)
chr2 (68-116)||(6999071-6999119)
chr2 (56-116)||(7497995-7498054)
chr2 (64-116)||(9760033-9760085)
chr2 (56-116)||(11980659-11980718)
chr2 (80-116)||(12498639-12498675)
chr2 (56-116)||(12600056-12600115)
chr2 (80-116)||(22888825-22888861)
chr2 (80-116)||(25881576-25881612)
chr2 (56-116)||(31635814-31635873)
chr2 (56-116)||(34373013-34373072)
chr2 (141-200)||(44987647-44987707)
[»] chr4 (44 HSPs)
chr4 (56-116)||(31468992-31469052)
chr4 (61-223)||(19165329-19165485)
chr4 (56-116)||(34363561-34363621)
chr4 (56-112)||(34995328-34995384)
chr4 (56-114)||(40721970-40722027)
chr4 (56-110)||(47288090-47288144)
chr4 (67-116)||(49585013-49585062)
chr4 (56-116)||(9472517-9472576)
chr4 (68-116)||(13139168-13139216)
chr4 (80-116)||(29175258-29175294)
chr4 (64-116)||(39158121-39158173)
chr4 (56-116)||(40308449-40308508)
chr4 (56-116)||(44257733-44257793)
chr4 (56-116)||(52895235-52895295)
chr4 (78-153)||(149450-149526)
chr4 (168-223)||(2575688-2575743)
chr4 (55-114)||(15985264-15985323)
chr4 (61-116)||(24990127-24990181)
chr4 (56-114)||(3078913-3078971)
chr4 (56-114)||(15522362-15522420)
chr4 (56-114)||(37514137-37514195)
chr4 (64-114)||(38519809-38519859)
chr4 (56-114)||(42815412-42815470)
chr4 (56-114)||(45548790-45548847)
chr4 (78-116)||(46212999-46213037)
chr4 (56-114)||(54165167-54165224)
chr4 (90-200)||(624232-624341)
chr4 (55-116)||(1799557-1799618)
chr4 (135-200)||(54802596-54802660)
chr4 (56-116)||(1795985-1796045)
chr4 (62-94)||(3218648-3218680)
chr4 (56-116)||(5249876-5249936)
chr4 (56-116)||(17805460-17805519)
chr4 (64-116)||(27051090-27051141)
chr4 (80-116)||(32546360-32546396)
chr4 (56-112)||(34114125-34114180)
chr4 (56-116)||(35332714-35332773)
chr4 (56-116)||(36444399-36444458)
chr4 (140-223)||(37295057-37295138)
chr4 (68-116)||(40609630-40609678)
chr4 (64-116)||(42916666-42916718)
chr4 (84-116)||(48326576-48326608)
chr4 (56-116)||(55609169-55609228)
chr4 (80-116)||(56474767-56474803)
[»] scaffold0002 (1 HSPs)
scaffold0002 (56-116)||(469641-469701)
[»] scaffold0053 (1 HSPs)
scaffold0053 (61-116)||(12510-12565)
[»] scaffold0504 (1 HSPs)
scaffold0504 (56-116)||(10739-10798)
[»] scaffold0178 (1 HSPs)
scaffold0178 (56-116)||(9784-9844)
[»] scaffold0160 (1 HSPs)
scaffold0160 (64-116)||(26437-26489)
[»] scaffold0291 (1 HSPs)
scaffold0291 (63-116)||(20084-20136)
[»] scaffold0001 (1 HSPs)
scaffold0001 (56-109)||(404756-404808)
[»] scaffold0204 (1 HSPs)
scaffold0204 (56-116)||(27347-27406)
[»] scaffold0154 (1 HSPs)
scaffold0154 (56-116)||(4323-4382)
[»] scaffold0018 (1 HSPs)
scaffold0018 (56-116)||(36010-36069)
[»] scaffold0014 (1 HSPs)
scaffold0014 (56-116)||(199274-199333)
[»] scaffold0013 (1 HSPs)
scaffold0013 (124-191)||(94811-94876)
[»] scaffold0003 (1 HSPs)
scaffold0003 (56-116)||(366302-366361)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5174670 - 5174448
Alignment:
Q  1 tcatcaatttctagggaagcaacgataaataaaacaaacatattattttaaataaatatatgtacaaccattttataataatttttgtgacaactttttc 100  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  5174670 tcatcaatttctacggaagcaatgatacataaaacaaacatattattttaaataaatatatgtacaaccattttataacaatttttgtgacaactttctc 5174571  T
Q  101 tcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaaataagtt 200  Q
    ||||||||||||||||         |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  5174570 tcttatactcacattatttttattcttctttttatattgctttagttttcgtgccaatacatatatctttctttgtaaaaatatggttgtcaaatagatt 5174471  T
Q  201 atcaaataaatagatgttcaaat 223  Q
    |||||||||||||||||||||||    
T  5174470 atcaaataaatagatgttcaaat 5174448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 6269374 - 6269434
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  6269374 atatttgtacaaccattttataacaatttttgtgacaactttctctctcatactcacatta 6269434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 18111668 - 18111615
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  18111668 tacaaccattttataataatttttgtgacaattttctctctcatactcacatta 18111615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 41430215 - 41430155
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||| ||||||||||| ||| || ||||||||||||||| ||||||||||||||||||    
T  41430215 atatatggacaaccattttctaacaacttttgtgacaactttctctcttatactcacatta 41430155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 42584810 - 42584870
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  42584810 atatatgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacatta 42584870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 35823038 - 35822902
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||| ||||||| ||| ||||||| |||||||||| ||||| | |||| |||||        |||||| ||| |||||||||  |||||||||    
T  35823038 atatttgtacatccattttctaacaatttttatgacaactttctctctcacactcgcattatatttttactttctctctctattgctttgatttttgtgc 35822939  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||||||  |||| ||||||||||||||||| ||||||||    
T  35822938 caatac--atatttttctttgtaaaaatatggttgtcaa 35822902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 46829487 - 46829545
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||    
T  46829487 atatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactcacat 46829545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 34108918 - 34108858
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||| ||||||||||||    
T  34108918 atatatgtacaaccattttctaacaacttttgtgacaattttctctctcatactcacatta 34108858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 41189606 - 41189502
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    ||||||| ||||||||||| || ||||||||||||||||||| | ||| ||||||||||||        |||||| ||| |||||||||||||||||||     
T  41189606 atatatgaacaaccatttttta-taatttttgtgacaactttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgt 41189508  T
Q  155 caatac 160  Q
    ||||||    
T  41189507 caatac 41189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 1471354 - 1471296
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  1471354 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacat 1471296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 40854718 - 40854582
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||| ||||||| ||| || ||||||||||| ||| ||||| ||||||||||||        |||||| ||| |||||||||  |||||||||    
T  40854718 atatctgtacatccattttctaacaacttttgtgacaattttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtgc 40854619  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||  ||||||||||||||||| ||||||||    
T  40854618 ca--acacatacttttctttgtaaaaatatggttgtcaa 40854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 9363395 - 9363455
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||||||| || ||||||||||||||| ||||| |||| |||||||    
T  9363395 atatttgtacaatcattttataacaacttttgtgacaactttatctctaatacacacatta 9363455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 24532998 - 24532946
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||| | |||||||||||||||| ||||||||| ||||||||||||    
T  24532998 acaactattttctgataatttttgtgacaattttttctctcatactcacatta 24532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 26018048 - 26018108
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| ||||||||||||| |||||||||||| || ||||| ||| ||||||||    
T  26018048 atatttgtacaatcattttataataacttttgtgacaacattatctctcatattcacatta 26018108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 28081845 - 28081786
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||||||||||| | |||||||| ||||| ||||||||||||    
T  28081845 atatttgtacaaccattttgtaataattttt-ttacaactttctctctcatactcacatta 28081786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 33212050 - 33212109
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| ||||||| |||||||||| ||||| ||||||||||||    
T  33212050 atatttgtacaaccattttctaacaattttt-tgacaactttatctctcatactcacatta 33212109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 44496866 - 44496806
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||| ||| ||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  44496866 atatttgtataactattttctaacaatttttgtgacaactttctctctcatactcacatta 44496806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 47012633 - 47012573
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||| |||||||||||||||||| ||| ||||| ||| ||||||||    
T  47012633 atatttgtacaatcattttctaataatttttgtgacaattttatctctcatattcacatta 47012573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 47644713 - 47644772
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  47644713 atatttgtacaaccactttattataattttt-tgacaactttctctctcatactcacatta 47644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 3062365 - 3062460
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaa 179  Q
    ||||||||||||||| ||||||||||||||||||       |||| | ||| ||||| ||| |||||||||| ||||| ||| | ||||||||||||    
T  3062365 ttttgtgacaactttctctcttatactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctat-tttttctttgtaaa 3062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 29855239 - 29855294
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||| ||||||||| | |||| ||||||||||| ||||| ||||||||||||    
T  29855239 tgtacaactattttataacatttttagtgacaactttctctctcatactcacatta 29855294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 36352650 - 36352603
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctct 103  Q
    ||||||||||||||||||| ||| || ||||||||||||||| |||||    
T  36352650 atatatgtacaaccattttgtaacaacttttgtgacaactttctctct 36352603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 10015018 - 10014961
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||| ||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  10015018 atatttgtacaactattttatgataatatttg-gacaactttttctctcatactcacat 10014961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 35586824 - 35586778
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||||||    
T  35586824 ccattttatgataacttttgtgacaactttctctctcatactcacat 35586778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 3144017 - 3143958
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||||| |||||||||||||||||| |||||| ||||||| | ||||||||||||    
T  3144017 aatatttgtacaatcattttataataattttt-tgacaa-tttttctttaatactcacatta 3143958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 113
Target Start/End: Complemental strand, 31274576 - 31274547
Alignment:
Q  84 tttgtgacaactttttctcttatactcaca 113  Q
    ||||||||||||||||||||||||||||||    
T  31274576 tttgtgacaactttttctcttatactcaca 31274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 41458964 - 41458904
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||||||||  | ||||||||| |||||||| ||||| ||||||||||||    
T  41458964 aatatttgtacaaccattttagtacaatttttgt-acaactttctctctcatactcacatta 41458904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 2790185 - 2790244
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| ||| ||||||| |||||||||| ||||| ||||||||||||    
T  2790185 atatttgtacaaccactttgtaacaattttt-tgacaactttctctctcatactcacatta 2790244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7295458 - 7295518
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||  | ||||||||  |||||||| ||||| ||||||||||||    
T  7295458 atatttgtacaaccattttagtacaatttttggaacaactttctctctcatactcacatta 7295518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 17479012 - 17479060
Alignment:
Q  56 atatatgtacaa-ccattttataataatttttgtgacaactttttctct 103  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17479012 atatttgtacaatccattttgtaataatttttgtgacaacattttctct 17479060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 17483447 - 17483495
Alignment:
Q  56 atatatgtacaa-ccattttataataatttttgtgacaactttttctct 103  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17483447 atatttgtacaatccattttgtaataatttttgtgacaacattttctct 17483495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 17500705 - 17500764
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| |||| |||| |||||||||| ||||| ||||||||||||    
T  17500705 atatttgtacaaccactttattataactttt-tgacaactttatctctcatactcacatta 17500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 17552509 - 17552450
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| |||| |||| |||||||||| ||||| ||||||||||||    
T  17552509 atatttgtacaaccactttattataactttt-tgacaactttatctctcatactcacatta 17552450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 17569767 - 17569719
Alignment:
Q  56 atatatgtacaa-ccattttataataatttttgtgacaactttttctct 103  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17569767 atatttgtacaatccattttgtaataatttttgtgacaacattttctct 17569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 17574202 - 17574154
Alignment:
Q  56 atatatgtacaa-ccattttataataatttttgtgacaactttttctct 103  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17574202 atatttgtacaatccattttgtaataatttttgtgacaacattttctct 17574154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 23034063 - 23034123
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||| | ||||||||||||| |||||||| || ||||| |||||||||| |||||    
T  23034063 atatttgtacgatcattttataataacttttgtgataattttttttcttatactcgcatta 23034123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 29723968 - 29723932
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacat 114  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  29723968 ataatttttgtgacaactttctctctcatactcacat 29723932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31398132 - 31398191
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||  || |||||||| |||||| ||||| ||||||||||||    
T  31398132 atatttgtacaaccattttatac-aacttttgtgataactttctctctcatactcacatta 31398191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 34978328 - 34978364
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34978328 aatttttgtgacaactttctctctcatactcacatta 34978364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 35452614 - 35452578
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacat 114  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  35452614 ataatttttgtgacaactttctctctcatactcacat 35452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 38259071 - 38259131
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | |||| ||||||||||||||| ||| | ||||| ||||||    
T  38259071 atatttgtacaaccattttttgataacttttgtgacaactttctctttcatactaacatta 38259131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 38340446 - 38340386
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||| || |||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  38340446 atatttgtaaaagcattttttaacaacttttgtgacaactttatctctcatactcacatta 38340386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41815153 - 41815212
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||| ||| ||||||| |||||||||| ||||| ||||||| ||||    
T  41815153 atatatgtacaaccaatttctaacaattttt-tgacaactttctctctcatactcatatta 41815212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 42598271 - 42598211
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| ||| ||||||||||| |||||| ||||| ||||||| ||||    
T  42598271 atatttgtacaactattttttaacaatttttgtgataactttatctctcatactcatatta 42598211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 43079695 - 43079636
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| | |||||||||| ||||||||| ||||| ||||||||||||    
T  43079695 atatttgtacaaccactttgtgataatttttg-gacaactttctctctcatactcacatta 43079636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 13422988 - 13423142
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgccaatacatatat 166  Q
    |||||| |||| |||||||||||||||||| ||||| ||||||||||||        |||||| ||| ||||  |||||||||||||||||||||||| |    
T  13422988 ccatttcataacaatttttgtgacaactttctctctcatactcacattatatttttactttctctctctattattttagtttttgtgccaatacatattt 13423087  T
Q  167 ctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
      ||||||||||||||||||||||| | |  ||| |||||||||| |||||||||||    
T  13423088 --ttctttgtaaaaatatagttgtccacttggttgtcaaataaatggatgttcaaat 13423142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 28630111 - 28630166
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  28630111 tgtacaaccattttatagtaatttttgtgacaactttctctctcatactcacatta 28630166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 1376372 - 1376432
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||    
T  1376372 atatttgtacaaccattttctaacaacttttgtgacaactttctctcttatactcacatta 1376432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 1384120 - 1384180
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||    
T  1384120 atatttgtacaaccattttctaacaacttttgtgacaactttctctcttatactcacatta 1384180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 16368110 - 16368050
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||    
T  16368110 atatttgtacaaccattttataataatttttgtaacaactttctttctcatactcacatta 16368050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 16337980 - 16337926
Alignment:
Q  62 gtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||    
T  16337980 gtacaaccattttataataacttttgtaacaactttctctctcatactcacatta 16337926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 34570658 - 34570600
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||    
T  34570658 atatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactcacat 34570600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 33651042 - 33651088
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  33651042 attttgtaataatttttgtgacaactttctctctaatactcacatta 33651088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 27102123 - 27102175
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||| |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  27102123 atatttgtacaaccattttctaataattttt-tgacaattttttctcttatact 27102175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 27143945 - 27143997
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||| |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  27143945 atatttgtacaaccattttctaataattttt-tgacaattttttctcttatact 27143997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 16743329 - 16743270
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| |||||||||||  ||||||||| ||||| ||||||||||||    
T  16743329 atatttgtacaaccattttttaataattttt-agacaactttctctctcatactcacatta 16743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 25127896 - 25127836
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || |||||||| |||||| ||||| ||||||||||||    
T  25127896 atatttgtacaaccattttgtaacaacttttgtgaaaactttctctctgatactcacatta 25127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 21968945 - 21968895
Alignment:
Q  66 aaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| ||||||||||| ||| |||||| ||| ||||||||||||||    
T  21968945 aaccattttttaataatttttatgataactttctcttttatactcacatta 21968895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 5028302 - 5028269
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||||||||||||||||    
T  5028302 ttttgtgacaactttctctcttatactcacatta 5028269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 2242061 - 2242025
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  2242061 aatttttgtgacaactttctctctcatactcacatta 2242025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 2689103 - 2689067
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  2689103 aatttttgtgacaactttctctctcatactcacatta 2689067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7693323 - 7693382
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| ||||||||| | |||||||| ||||| ||||||||||||    
T  7693323 atatttgtacaaccactttattataattttt-taacaactttctctctcatactcacatta 7693382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 19789139 - 19789080
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | || |||| |||||||||| ||||| ||||||||||||    
T  19789139 atatttgtacaaccattttattacaactttt-tgacaactttctctctcatactcacatta 19789080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 20822919 - 20822871
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  20822919 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 20822871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 4088451 - 4088617
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||| ||||||||||| || ||||||||||||||| ||| | ||||||||||||        |||||||||| ||||||||| ||||| ||||    
T  4088451 atatttgtacatccattttataacaacttttgtgacaactttctctttcatactcacattatatttttactttctttctctattgctttggttttcgtgc 4088550  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
     |||||||| ||  ||||||||||||||||  |||||| ||| ||| ||||| ||||||||||||||||    
T  4088551 taatacatacat--ttctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaat 4088617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 6758854 - 6758794
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  6758854 atatatgtacaaccattttctaacaatttttgtgacaactttctctcttatactcacatta 6758794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 6940213 - 6940155
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  6940213 atatttgtacaaccattttataataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 40829422 - 40829482
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  40829422 atatttgtacaaccattttttaataatttttgtgacaattttttctctcatactcacatta 40829482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 16690507 - 16690643
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||  ||| || ||||||||||||||| ||| | ||||||||||||        |||||||||| ||||||||| ||||||||||    
T  16690507 atatttgtacaaccatttcttaacaacttttgtgacaactttctctttcatactcacattatatttttactttctttctctattgctttggtttttgtgc 16690606  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||  ||||||||||||||||| ||||||||    
T  16690607 ca--acacatacttttctttgtaaaaatatggttgtcaa 16690643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 38293415 - 38293362
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||| |||||||||||||||||| ||| | ||||||||||||    
T  38293415 tacaaccattttataacaatttttgtgacaactttctctatcatactcacatta 38293362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 22098263 - 22098323
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  22098263 atatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacatta 22098323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 14051358 - 14051320
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  14051358 ataatttttgtgacaactttttcttttatactcacatta 14051320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 18695326 - 18695384
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  18695326 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacat 18695384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 8087806 - 8087866
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||| ||| ||||||||||| |||||||||||||||| || |||||||||    
T  8087806 aatatttgtacaaccactttctaataattttt-tgacaactttttctctcatgctcacatta 8087866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 32510889 - 32510836
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||| ||||| |||||||||||||||| ||| || |||||||||||||||    
T  32510889 tacaaccaatttatgataatttttgtgacaattttctcacttatactcacatta 32510836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 189754 - 189706
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  189754 ccattttatgataacttttgtgacaactttctctctcatactcacatta 189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 1079992 - 1079911
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgccaatac 160  Q
    |||||||||||||||||| ||||| ||| ||||||||        |||||||||||||||||||| | ||||||||||||||    
T  1079992 aatttttgtgacaactttctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatac 1079911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 8726437 - 8726390
Alignment:
Q  66 aaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||    
T  8726437 aaccattttgcaataatttttgt-acaactttttctcttatactcacat 8726390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 19481233 - 19481185
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  19481233 ccattttatgataacttttgtgacaactttctctctcatactcacatta 19481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 39191897 - 39191838
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| ||| ||| ||| ||||||| |||||||||| ||||||||||||||||||    
T  39191897 atatatgtacatccactttttaacaattttt-tgacaactttctctcttatactcacatta 39191838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 19840036 - 19839989
Alignment:
Q  69 cattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||| | |||||||||||||||||| ||||| ||||||||||||    
T  19840036 cattttatgacaatttttgtgacaactttctctctcatactcacatta 19839989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 32912059 - 32912106
Alignment:
Q  69 cattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  32912059 cattttatgataatttttgtgacaattttctctctcatactcacatta 32912106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 34379469 - 34379520
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    |||||||||||  ||||||||||||||||| ||| ||||| |||||||||||    
T  34379469 acaaccatttttaaataatttttgtgacaattttctctctcatactcacatt 34379520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 3674890 - 3674852
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  3674890 ataatttttgggacaactttctctcttatactcacatta 3674852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 21012576 - 21012622
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctc 102  Q
    |||| |||||||||||||||| | |||||||||||||||||| ||||    
T  21012576 atatttgtacaaccattttatgacaatttttgtgacaactttctctc 21012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 26686903 - 26686949
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||||||||||||||| ||||| ||| ||||||||    
T  26686903 attttttaataatttttgtgacaactttctctctcatattcacatta 26686949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 26956634 - 26956680
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||||||||||||||| ||||| ||| ||||||||    
T  26956634 attttttaataatttttgtgacaactttctctctcatattcacatta 26956680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 11954461 - 11954498
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatt 115  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  11954461 ataatttttgtgacaactttctctctcatactcacatt 11954498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 14532534 - 14532571
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatt 115  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  14532534 ataatttttgtgacaactttctctctcatactcacatt 14532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 31748344 - 31748397
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||| |||||||| ||||| | | || |||||||||||||||||||||||||||    
T  31748344 atatttgtacaactatttttttacaacttttgtgacaactttttctcttatact 31748397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 884469 - 884509
Alignment:
Q  76 taataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  884469 taataaattttgtgacaactttatctctcatactcacatta 884509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 1293149 - 1293101
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctctt 104  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||||    
T  1293149 atatttgtacaaccattttttaacaacttttgtgacaactttctctctt 1293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4719658 - 4719718
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| | | || |||||||||||| |||||||| ||||||||||||    
T  4719658 atatttgtacaaccaatttttgacaacttttgtgacaaccttttctctcatactcacatta 4719718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 6446554 - 6446473
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatat 164  Q
    ||||||||||||||| ||||| ||||||||||||       |||| ||||| ||||||||| ||||| || | |||||||||    
T  6446554 ttttgtgacaactttctctctcatactcacattactttttactttatttctctattgcttttgttttcgtacaaatacatat 6446473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 6517732 - 6517780
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  6517732 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 6517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 20125397 - 20125452
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| |||||||||| ||||| | ||||||| |||||||||||||||| ||||||||    
T  20125397 atatttgtacaaccactttattacaattttt-tgacaactttttctctaatactcac 20125452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 20985592 - 20985533
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||   ||||||||||| |||||||| ||||| ||||||||||||    
T  20985592 atatttgtacaaccatttttgtataatttttgt-acaactttctctctcatactcacatta 20985533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 23929525 - 23929565
Alignment:
Q  76 taataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||||| ||||  ||||||||    
T  23929525 taataatttttgtgacaactttttcttttatgttcacatta 23929565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 27487963 - 27488060
Alignment:
Q  124 ctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||||| ||| ||||||||| ||||||||||||||  || ||  ||||||||||||| | ||||| ||  | || |||||| | ||||||||||||||||    
T  27487963 ctttctctctctattgctttggtttttgtgccaat--atttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaat 27488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31708378 - 31708437
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||| || |||| |||||||||| ||||| ||||||| ||||    
T  31708378 atatttgtacaaccattttataacaactttt-tgacaactttctctctcatactcatatta 31708437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 34124641 - 34124689
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| ||||||||||||| || ||| ||||| ||||||||||||    
T  34124641 ccattttatgataatttttgtgataattttctctctcatactcacatta 34124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 36416125 - 36416066
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| ||||||| |||||||||| ||||  ||||||||||||    
T  36416125 atatttgtacaaccattttctaacaattttt-tgacaactttctctcacatactcacatta 36416066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 40364576 - 40364636
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||| | ||||||||| || |||| |||||||||| ||||| ||||||||||||    
T  40364576 atatctgtacagctattttataacaacttttatgacaactttctctctcatactcacatta 40364636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 52485486 - 52485646
Alignment:
Q  62 gtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgccaatac 160  Q
    ||||||||||||||||| |||||||| ||||||||| ||| | ||||||||||||        |||| | ||| ||||||||| ||||| ||||||||||    
T  52485486 gtacaaccattttataacaatttttgcgacaactttctctgtcatactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T
Q  161 atatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||  |  |||||||||||||||| |||||| | || ||| ||||| ||||||||||||||||    
T  52485586 atactt--ttctttgtaaaaatatggttgtccattaggttgtcaaacaaatagatgttcaaat 52485646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 24095457 - 24095304
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatatatc 167  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||||       |||| ||||| ||||||||| ||||| |||| ||||| ||  |     
T  24095457 ccattttatgataatttttgtgacaactttctctctcatactcacattattttttactttatttctctattgctttggttttcgtgcaaataccta-ctt 24095359  T
Q  168 tttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||||| ||| ||| ||||||| | ||||| ||||  |||| |||||||||||    
T  24095358 tttctttgt-aaattatggttgtcataaaagttgtcaaccaaatggatgttcaaat 24095304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 26772384 - 26772436
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  26772384 acaaccattttataataatttttgtgacaactttctctctcatattcacatta 26772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 1436824 - 1436960
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||  |||||| ||||| |||||| || ||||||||||||||||||        |||||| ||| ||||| |||| |||||||||    
T  1436824 atatttgtacaaccatttcctaataacttttgagacaacattctctcttatactcacattatatttttactttctctctctattgttttattttttgtgc 1436923  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||  ||||||||||||||||| ||||||||    
T  1436924 ca--acacatacttttctttgtaaaaatatggttgtcaa 1436960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 52963379 - 52963251
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||| ||| || ||||||||||| ||||||||| ||| ||| ||||        |||||||| | |||| ||||||||||||||     
T  52963379 atatttgtacaaccattttttaacaacttttgtgacaattttttctctcatattcatattatatttttactttctttttctattactttagtttttgtgt 52963280  T
Q  155 caatacatatatctttctttgtaaaaatata 185  Q
    ||||||  |||| ||||||||||||||||||    
T  52963279 caatac--atatttttctttgtaaaaatata 52963251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 9653380 - 9653440
Alignment:
Q  163 atatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||||||||||||||||||||||||||||| ||   |  ||||||||||||||||||||||    
T  9653380 atatctttctttgtaaaaatatagttgtcatattgttcgtcaaataaatagatgttcaaat 9653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 26550253 - 26550305
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||    
T  26550253 acaaccattttttaataatttttgtgacaactttctctctcatattcacatta 26550305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 27168737 - 27168685
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||    
T  27168737 acaaccattttttaataatttttgtgacaactttctctctcatactcatatta 27168685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 28300294 - 28300353
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  28300294 atatttgtacaaccattttattataattttt-tgacaactttttcttttatactcaaatta 28300353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 28920113 - 28920053
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||| ||||    
T  28920113 atatttgtacaactatttgataataatttttgtgacaactttctctctcatactcatatta 28920053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 37894306 - 37894246
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  37894306 atatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacatta 37894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 45186615 - 45186555
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| |||||||||||||||||| ||||| || |||||||||    
T  45186615 atatttgtacaaccattttctaacaatttttgtgacaactttctctctcatgctcacatta 45186555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 21660112 - 21660174
Alignment:
Q  54 aaatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| |||||||| ||||||| ||||||||||||| |||||| ||| ||||| ||||||||    
T  21660112 aaatatttgtacaactattttatgataatttttgtgataactttctctattataatcacatta 21660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 29573419 - 29573361
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  29573419 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactcacat 29573361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 31157719 - 31157681
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31157719 ataatttttgtgacaattttttctcttatactcacatta 31157681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 52714741 - 52714877
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||| ||||||| ||| ||||||||||| |||||| ||||| ||||| ||||||        |||||| ||| |||||||||  |||||||||    
T  52714741 atatttgtacatccattttctaacaatttttgtgataactttctctctcatacttacattatatttttactttctctctctattgctttgatttttgtgc 52714840  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||  ||||||||||||||||| ||||||||    
T  52714841 ca--acacatacttttctttgtaaaaatatggttgtcaa 52714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 349476 - 349435
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaacttt 97  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  349476 atatttgtacaaccattttataataatttttgtggcaacttt 349435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 3953523 - 3953478
Alignment:
Q  71 ttttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  3953523 ttttatgataatttttgtgacaactttctctctcatactcacatta 3953478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 1261090 - 1261134
Alignment:
Q  72 tttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||    
T  1261090 tttataataatttttgtggcaactttctcttttatactcacatta 1261134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 4494278 - 4494242
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacat 114  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4494278 ataatttttgtgacaactttctctcttatactcacat 4494242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 26452786 - 26452726
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| |||||||||||| ||| || |||||| |||||||| ||||| ||||||||||||    
T  26452786 atatatatacaaccattttctaacaacttttgttacaactttctctctcatactcacatta 26452726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 35377118 - 35376979
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaa 181  Q
    ||||||||||||||| ||||| | ||||||||||        |||||||||| |||||||||  |||||||||||||||||  || |||||||||||||     
T  35377118 ttttgtgacaactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatacat-cat-tttctttgtaaaat 35377021  T
Q  182 tatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    | | ||||||| | ||||| |||  ||||| |||||||||||    
T  35377020 tttggttgtcacaaaagttgtcatctaaatggatgttcaaat 35376979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 36671054 - 36671018
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36671054 aatttttgtgacaactttttctctcatactcacatta 36671018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41369605 - 41369664
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||||||||||| |||||||||| ||||| | ||||||||||    
T  41369605 atatttgtacaaccattttctaataattttt-tgacaactttctctctcaaactcacatta 41369664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 49021719 - 49021779
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||| ||||||| |||||| ||||||||||||||| | ||| ||||||||||||    
T  49021719 atatttgtacatccattttttaataacttttgtgacaactttctttctcatactcacatta 49021779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 51137099 - 51137039
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| |||||| ||||||||||||||||||||| | ||| ||||||    
T  51137099 atatttgtacaactattttttaataacttttgtgacaactttttctctcagacttacatta 51137039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 9644672 - 9644727
Alignment:
Q  168 tttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||| ||||||||||||||||| ||  ||  ||||||||||||||||||||||    
T  9644672 tttctttataaaaatatagttgtcatattggtcgtcaaataaatagatgttcaaat 9644727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 10811151 - 10811202
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    ||||||||||||| | || ||||||||||||||| ||||| |||||||||||    
T  10811151 acaaccattttatgacaacttttgtgacaactttctctctcatactcacatt 10811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 54099421 - 54099284
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtg 153  Q
    ||||| |||||| ||||||| ||| || ||||||||||||||| |||||||| |||| ||||        |||||| ||| |||||||||  ||||| ||    
T  54099421 aatatttgtacatccattttctaacaacttttgtgacaactttctctcttatgctcatattatatttttactttctctctctattgctttgatttttatg 54099322  T
Q  154 ccaatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    |||  |||||||  |||||||||||||||||  |||||||    
T  54099321 cca--acatatacttttctttgtaaaaatatgattgtcaa 54099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 3521428 - 3521466
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  3521428 ataacttttgtgacaactttttctcttatacttacatta 3521466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 36756114 - 36755978
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnncttt-ctttctatattgctttagtttttgtgc 154  Q
    |||| |||||| ||||||| |||  |||||| ||| |||||||||||| |||||| |||||        ||| || ||| |||||||||  |||||||||    
T  36756114 atatttgtacatccattttctaaccatttttatgataactttttctctcatactcgcattatatttttattttctctctctattgctttgatttttgtgc 36756015  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    |||  ||||||  ||||||||||||||||| ||||||||    
T  36756014 caa--catatacttttctttgtaaaaatatggttgtcaa 36755978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 3281752 - 3281719
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||||||||||||||||    
T  3281752 ttttgtgacaactttctctcttatactcacatta 3281719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 3648581 - 3648646
Alignment:
Q  50 aaataaatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    |||||| ||| || ||||||||||||| |||| ||||||||||| ||| ||||| ||| |||||||    
T  3648581 aaataattatttgaacaaccattttatgataacttttgtgacaattttctctctcatattcacatt 3648646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 29917088 - 29917027
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||||| |||||  ||| || ||||||||||||||| ||||| ||||||||||||    
T  29917088 aatatttgtacaatcatttcctaacaacttttgtgacaactttctctctcatactcacatta 29917027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 29966241 - 29966180
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||||| |||||  ||| || ||||||||||||||| ||||| ||||||||||||    
T  29966241 aatatttgtacaatcatttcctaacaacttttgtgacaactttctctctcatactcacatta 29966180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 42672251 - 42672304
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| || ||| |||||||||||||||||||||| ||||||||| | ||||||    
T  42672251 tacaatcactttttaataatttttgtgacaactttatctcttatatttacatta 42672304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 43169790 - 43169757
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||| ||||||||||||    
T  43169790 ttttgtgacaactttttctctcatactcacatta 43169757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 51230671 - 51230630
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaacttt 97  Q
    |||| |||||||||||||||| |||||||||| |||||||||    
T  51230671 atatttgtacaaccattttatgataatttttgcgacaacttt 51230630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 288741 - 288793
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||| | |||| ||||||||||||||| ||||| ||||||||||||    
T  288741 acaacaatttttttataacttttgtgacaactttctctctcatactcacatta 288793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 622523 - 622464
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | || |||| |||||||||| ||||| ||||||||||||    
T  622523 atatttgtacaaccattttattacaactttt-tgacaactttctctctcatactcacatta 622464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 1295340 - 1295399
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| | |||| ||||| ||||||||||||||| ||||||||||||    
T  1295340 atatttgtacaactattttgtgataacttttg-gacaactttttctctcatactcacatta 1295399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 9311048 - 9311108
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||| | ||||| |||||||||||||| ||||||| ||||| ||||    
T  9311048 atatttgtacaatcattttctgataatatttgtgacaactttctctcttacactcatatta 9311108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 14207313 - 14207261
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  14207313 acaacgattttgtaacaacttttgtgacaactttctctctcatactcacatta 14207261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 14215061 - 14215009
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  14215061 acaacgattttgtaacaacttttgtgacaactttctctctcatactcacatta 14215009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 16479640 - 16479699
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||  || ||||||||||||||| ||||| ||||||||||||    
T  16479640 atatttgtacaaccattttgtac-aacttttgtgacaactttctctctcatactcacatta 16479699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 20080105 - 20080141
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  20080105 aatttttgtgacaactttctctctcatactcacatta 20080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 33939252 - 33939303
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||| ||||||||    
T  33939252 acaaccatttttta-taatttttgtgacaactttctctctcatattcacatta 33939303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 34058004 - 34057960
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||||    
T  34058004 ccattttatgataacttttgtgacaactttctctctcatactcac 34057960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 34064160 - 34064109
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| |||||| |||||| |||||||| ||||| ||||||||||||    
T  34064160 acaaccatttt-taataacttttgtaacaactttatctctcatactcacatta 34064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 35425735 - 35425676
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||| | || |||| |||||||||| ||||| ||||||||||||    
T  35425735 atatatgtacaaccactttattacaactttt-tgacaactttatctctcatactcacatta 35425676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 39697273 - 39697225
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||| | ||||||||||| |||||||| ||||| ||||||||||||    
T  39697273 ccattttgtgataatttttgtaacaactttctctctcatactcacatta 39697225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 42358678 - 42358642
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  42358678 aatttttgtgacaactttctctctcatactcacatta 42358642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 42424218 - 42424277
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||| |||| ||||| |||| |||| |||||||||| ||||||||||||||||||    
T  42424218 atatttgtacgaccactttattataactttt-tgacaactttatctcttatactcacatta 42424277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 42672890 - 42672838
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||||| | |||||||||||||||| ||||||||| ||| ||||||||    
T  42672890 acaactattttttgataatttttgtgacaaatttttctctcatattcacatta 42672838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 43409425 - 43409366
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| | |||||||||| || |||||| ||||||||||||||||||    
T  43409425 atatttgtacaaccactttgtgataatttttg-gaaaactttctctcttatactcacatta 43409366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 48353004 - 48353064
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||| ||||||| ||| || ||||||||||||||| ||||| ||||||| ||||    
T  48353004 atatttgtacatccattttttaacaacttttgtgacaactttctctctcatactcatatta 48353064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 48405418 - 48405478
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | | || |||||| |||||||| ||||| ||||||||||||    
T  48405418 atatttgtacaaccattttgtgacaacttttgtaacaactttctctctcatactcacatta 48405478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 49761249 - 49761190
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| ||||||||| |||||||| ||||| | ||||||||||    
T  49761249 atatttgtacaaccattttctaacaatttttgt-acaactttctctctcacactcacatta 49761190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 49761342 - 49761419
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatac 160  Q
    ||||||||||||||| ||||| ||||||||||||       |||| | ||| ||||||||| |||||||||| |||||    
T  49761342 ttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggtttttgtgcaaatac 49761419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 52100269 - 52100328
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||| | ||||| ||||||    
T  52100269 atatttgtacaaccattttttaataatttttgt-acaactttctctttcatacttacatta 52100328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 55400019 - 55400067
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  55400019 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 55400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 43286018 - 43285886
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgccaatacat 162  Q
    ||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||        |||||| ||| ||||||||| |||||| |  ||||||      
T  43286018 acaaccattttctaataacttttgtgacaactttctctctcatactcacattatatttttactttctctctttattgctttggtttttatatcaatac-- 43285921  T
Q  163 atatctttctttgtaaaaatatagttgtcaaataa 197  Q
    |||| ||||||| ||||||||||||||||||||||    
T  43285920 atatttttctttctaaaaatatagttgtcaaataa 43285886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 45405539 - 45405599
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||    
T  45405539 atatatgtacaaccattttttaataatttttgtgacaactttttctttcatattcacatta 45405599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 35067168 - 35067304
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||  ||| || ||||||||||||||| ||||| ||||||||||||        |||||| ||| ||||||||| ||||||||||    
T  35067168 atatttgtacaaccatttcttaacaacttttgtgacaactttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtgc 35067267  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||  ||||||||||||||||| ||||||||    
T  35067268 ca--acacatacttttctttgtaaaaatatggttgtcaa 35067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 42786723 - 42786663
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | | |||||||||||||||||| ||||||||||||||||||    
T  42786723 atatttgtacaaccattttcttacaatttttgtgacaactttctctcttatactcacatta 42786663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 25830309 - 25830249
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  25830309 atatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacatta 25830249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 28756543 - 28756603
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||| ||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  28756543 atatttgtgcaatcattttataataatttttgtgacaattttatctctcatactcacatta 28756603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 33100524 - 33100472
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| || ||||||||||||||| ||||| ||||||||||||    
T  33100524 acaaccattttataacaacttttgtgacaactttctctctcatactcacatta 33100472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 38675611 - 38675777
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| ||||||||||||||   ||||||||| |||||||||| ||||| |||| |||||||        |||||| ||| |||| |||| ||||||||||    
T  38675611 atatttgtacaaccatttttctataatttttatgacaactttctctctcatacccacattatatttttactttctctctctatttctttggtttttgtgc 38675710  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||  |||  ||||||| ||||  ||| |||||| | |   |||||||||||||||||||||||||    
T  38675711 caatac--atacttttctttttaaagttatggttgtctatttgattatcaaataaatagatgttcaaat 38675777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 7777229 - 7777183
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  7777229 attttttaacaatttttgtgacaactttctctcttatactcacatta 7777183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 67224 - 67164
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| |||| |||||||    
T  67224 atatttgtacaaccattttctaacaacttttgtgacaactttctctctcatacccacatta 67164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 12655930 - 12655990
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||||||||| |||||| | |||||||||||| ||| ||| ||||    
T  12655930 atatttgtacaaccattttataataacttttgtaataactttttctctcatattcatatta 12655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 14548886 - 14548827
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| |||||||||||  ||||||||| ||||| ||||||||||||    
T  14548886 atatttgtacaaccattttttaataattttt-agacaactttctctctcatactcacatta 14548827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 20473787 - 20473846
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||| ||||||| |||||||||| ||| | ||||||||||||    
T  20473787 atatttgtacaaccattttataacaattttt-tgacaactttctctatcatactcacatta 20473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 36969632 - 36969572
Alignment:
Q  163 atatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||| ||||||||||||||||| ||||||  ||||||| ||||| |||| |||||||||||    
T  36969632 atatatttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaat 36969572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 43715883 - 43715942
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  43715883 atatttgtacaaccattttctaa-aacttttgtgacaactttctctctcatactcacatta 43715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 44061733 - 44061785
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||    
T  44061733 acaaccattttttgataacttttgtgacaactttctctctcatactcacatta 44061785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 4658314 - 4658222
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatac 160  Q
    ||||||||| | || ||||||||||||||||||||| ||||| ||||||       |||| | ||| ||||||||| |||||||||| |||||    
T  4658314 ccattttatgacaacttttgtgacaactttttctctcatacttacattactttttactttatctctctattgctttggtttttgtgcaaatac 4658222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 45406039 - 45405988
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    ||||| ||||| ||||||||||||||| || ||||||||| |||||||||||    
T  45406039 acaactattttttaataatttttgtgataattttttctctcatactcacatt 45405988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 2733018 - 2733056
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  2733018 ataacttttgtgacaactttttctctcatactcacatta 2733056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 6825340 - 6825283
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||||||||||| ||||| | | || |||| |||||||||||||||||||||||||||    
T  6825340 atatatgtacaacaattttgtgacaactttt-tgacaactttttctcttatactcacat 6825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 10344332 - 10344389
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||| | |||||||||||||||||| ||||||||| ||||| ||||||||||    
T  10344332 atatttgtacatctattttataataatttttg-gacaactttctctctcatactcacat 10344389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 10644865 - 10644807
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||| ||||||    
T  10644865 atatttgtacaaccattttgtaacaacttttgtgacaactttctctctcataatcacat 10644807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 10692468 - 10692506
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  10692468 ataatttttgtgacaactttatctctcatactcacatta 10692506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 11089584 - 11089641
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||||  ||||||||| |||||||||||||||| | ||||||||    
T  11089584 atatttgtacaaccattttactataattttt-tgacaactttttctctcacactcacat 11089641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 12898971 - 12898933
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  12898971 ataaattttgtgacaactttttctctcatactcacatta 12898933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 22960480 - 22960422
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||||  ||||||| |||||||| ||| ||||| ||||||||||    
T  22960480 atatttgtacaaccattttaggataatttctgtgacaattttatctctcatactcacat 22960422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 6972232 - 6972298
Alignment:
Q  125 tttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||||| ||| ||||||||| ||||||||||||  ||| |||  ||||||||||||||||| ||||||||    
T  6972232 tttctctctctattgctttggtttttgtgcca--acacatacttttctttgtaaaaatatggttgtcaa 6972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 28756682 - 28756723
Alignment:
Q  69 cattttataataatttttgtgacaactttttctcttatactc 110  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||    
T  28756682 cattttataataatttttgtgacaattttatctctcatactc 28756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 37449462 - 37449429
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||| ||||||||||||    
T  37449462 ttttgtgacaactttttctctcatactcacatta 37449429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 41541892 - 41541925
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||||||||||||||||    
T  41541892 ttttgtgacaactttctctcttatactcacatta 41541925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 295553 - 295613
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| ||| |||||| ||||| ||||||||||||    
T  295553 atatttgtacaaccactttatcacaatttttttgataactttctctctcatactcacatta 295613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 3413187 - 3413129
Alignment:
Q  124 ctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatat 184  Q
    |||||||| | ||||||||| ||||||||||||||||||  || |||||||||||||||||    
T  3413187 ctttctttttctattgctttggtttttgtgccaatacat-gat-tttctttgtaaaaatat 3413129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 5924832 - 5924875
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  5924832 attttataataatttttgt-acaactttctctctcatactcacat 5924875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 5925069 - 5925120
Alignment:
Q  62 gtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||| ||||||||||| ||||||||| |||||||| ||||| ||||||||||    
T  5925069 gtacatccattttataacaatttttgt-acaactttatctctcatactcacat 5925120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 23754762 - 23754710
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| |||||| ||||||||||||||| ||| | ||||||| ||||    
T  23754762 acaaccattttttaataacttttgtgacaactttctctttcatactcatatta 23754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 25987842 - 25987790
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | | || ||||||||||||||| ||||| ||||||||||||    
T  25987842 acaaccatttttttacaacttttgtgacaactttatctctcatactcacatta 25987790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 27630905 - 27630964
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||| ||||||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  27630905 atatttgtacatccattttatgacaattttt-tgacaactttctctctcatactcacatta 27630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 31596968 - 31597016
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | |||||||||||||||| | ||||| ||||||||||||    
T  31596968 ccattttatgacaatttttgtgacaactctctctctcatactcacatta 31597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 33279612 - 33279552
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||  ||| || ||||||||||||||| ||||| ||||| ||||||    
T  33279612 atatttgtacaaccatttcttaacaacttttgtgacaactttatctctcatacttacatta 33279552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 33863311 - 33863252
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| | |||||||||  ||||| ||| ||||| ||||||||||||    
T  33863311 atatatgtacaaccattttctgataattttt-agacaattttatctctcatactcacatta 33863252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 35818953 - 35819004
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| ||| ||||||| |||||||||| ||||| ||||||||||||    
T  35818953 acaaccattttctaacaattttt-tgacaactttctctctcatactcacatta 35819004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 36969740 - 36969680
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||| ||| ||||||| | || ||||||||||||| | ||||||||||||||||||    
T  36969740 atatttgtaaaacaattttattacaacttttgtgacaactatctctcttatactcacatta 36969680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 41305045 - 41304986
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||  |||||||||| ||||||||||||||||||    
T  41305045 atatttgtacaaccactttattacaatttta-tgacaactttctctcttatactcacatta 41304986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 42716328 - 42716387
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| | ||||||||| |||||||||| ||||| ||||||||||||    
T  42716328 atatttgtacaaccactttttcataattttt-tgacaactttctctctcatactcacatta 42716387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 42768241 - 42768273
Alignment:
Q  84 tttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| ||||||||||||    
T  42768241 tttgtgacaactttttctctcatactcacatta 42768273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 49020467 - 49020303
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctt--tctatattgctttagtttttgtg 153  Q
    |||| |||||||||||||| ||| || ||||||||||| ||||||||| ||||||||||||        ||||||  ||| ||||| ||| |||||||||    
T  49020467 atatttgtacaaccattttttaacaacttttgtgacaattttttctctcatactcacattatattt---tttctttctctctattgttttggtttttgtg 49020371  T
Q  154 ccaatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||||  |||||| ||||||||||||||||| |||||||| |  ||| ||||  |||| |||||||||||    
T  49020370 ccaat--atatatttttctttgtaaaaatatggttgtcaatttggttgtcaaccaaattgatgttcaaat 49020303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 52437502 - 52437562
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  52437502 atatatatacaaccattttttaataatttttgtgacaactttctctctcatactcacatta 52437562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 1689399 - 1689459
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  1689399 atatttgtacaactattttataacaatttttgtgacaactttctctctcatactcacatta 1689459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 21433464 - 21433404
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||    
T  21433464 atatttgtacaaccattttgtaacaacttttgtgacaactttctctcttatactcacatta 21433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 38114340 - 38114292
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctct 103  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  38114340 aatatatgtacaaccattttataacaatttttgtgacaactttctctct 38114292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 46281444 - 46281502
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||    
T  46281444 atatttgtacaactattttgtaataatttttgtgacaactttctctctcatactcacat 46281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30535999 - 30536059
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  30535999 atatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacatta 30536059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 40699819 - 40699746
Alignment:
Q  137 ttgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaat 211  Q
    |||||||| |||| ||| |||||||||||| ||||||||||||  ||| |||||| ||||||||||||| |||||    
T  40699819 ttgctttaattttcgtgtcaatacatatat-tttctttgtaaatttatggttgtctaataagttatcaactaaat 40699746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 44723382 - 44723536
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgccaatacatatatct 168  Q
    |||||||||||||||||||||||||||| ||||| ||| |||| |||        |||| ||||| ||||| ||| ||||| || |||||||||| |  |    
T  44723382 attttataataatttttgtgacaactttctctctcatattcacgttatatttttactttatttctttattgttttggttttcgtaccaatacataca--t 44723479  T
Q  169 ttctttgtaaaaatatagttgtcaaataagt--tatcaaataaatagatgttcaaat 223  Q
    ||||||||||||||||  |||||| ||| ||  ||  ||| ||||||||||||||||    
T  44723480 ttctttgtaaaaatatgattgtcacataggttgtaaaaaaaaaatagatgttcaaat 44723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 11947803 - 11947863
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | || ||||||||||||||| ||||| ||||| ||||||    
T  11947803 atatttgtacaaccattttatgacaacttttgtgacaactttctctctcatactgacatta 11947863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 47642662 - 47642610
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||    
T  47642662 acaaccattttttgataacttttgtgacaactttctctctcatactcacatta 47642610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 49596243 - 49596302
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  49596243 atatttgtacaaccattttattacaattttt-tgacaactttctctctcatactcacatta 49596302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 4213088 - 4213139
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    ||||||||||| | |||| ||||||||||||||| ||||| |||||||||||    
T  4213088 acaaccattttttgataacttttgtgacaactttctctctcatactcacatt 4213139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 30744999 - 30745054
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||| |||||| ||||||||||||||| ||| | ||||||| ||||    
T  30744999 tgtacaaccattttctaataacttttgtgacaactttctctatcatactcatatta 30745054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 30766450 - 30766505
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||| |||||| ||||||||||||||| ||| | ||||||| ||||    
T  30766450 tgtacaaccattttctaataacttttgtgacaactttctctatcatactcatatta 30766505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 49621371 - 49621429
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    |||| |||||||||||||| |||||||||||  ||||||||| ||||| |||||||||||    
T  49621371 atatttgtacaaccattttgtaataattttt-agacaactttctctctcatactcacatt 49621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 5771789 - 5771751
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  5771789 ataatttttgtgacaactttctctctcatactcacatta 5771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 43056724 - 43056781
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| ||||||||||||||  ||||||||||| ||||||||| ||||| ||||||||||    
T  43056724 atatttgtacaaccattttgcaataatttttg-gacaactttctctctcatactcacat 43056781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 49446861 - 49446691
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||| ||||||||| ||  |||||||||||||||||| ||||| ||||| ||||||        |||||| ||| |||| ||||  | |||||||    
T  49446861 atatttgtaaaaccattttgtaccaatttttgtgacaactttctctctcatacttacattatatttttactttctctctctattactttgatatttgtgc 49446762  T
Q  155 caatacat--atatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||||  |||| ||||||||||||||| |  ||||| | | |||| ||||  |||| |||||||||||    
T  49446761 caatacatacatatttttctttgtaaaaatgtgattgtccatttagttgtcaagcaaattgatgttcaaat 49446691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 49699815 - 49699758
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||||| ||||||||| | |||||||| | ||||||||||||||    
T  49699815 atatttgtacaaccattttatgataattttt-taacaactttctttcttatactcacat 49699758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 51193194 - 51193137
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||| ||||||||||| |||||||| ||||||||| ||||| ||||||||||    
T  51193194 atatttgtacatccattttataacaatttttg-gacaactttctctctcatactcacat 51193137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 16836152 - 16836119
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||| ||||||||||||    
T  16836152 ttttgtgacaactttttctctcatactcacatta 16836119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 30735330 - 30735297
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||| ||||||||||||    
T  30735330 ttttgtgacaactttttctctcatactcacatta 30735297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 31088188 - 31088248
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| || ||||||||||| || ||| |||||||| |||||||||||| ||||||||||||    
T  31088188 aatatttgaacaaccatttttta-taacttttgtgataactttttctctcatactcacatta 31088248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 649784 - 649836
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | | || ||||||||||||||| ||||| ||||||||||||    
T  649784 acaaccatttttttacaacttttgtgacaactttctctctcatactcacatta 649836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 2492421 - 2492481
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | || |||||||| || ||| ||||| ||||||||||||    
T  2492421 atatttgtacaaccattttattacaacttttgtgataattttctctctcatactcacatta 2492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 3919308 - 3919367
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | |||||||||| ||||||||| ||||| |||||| |||||    
T  3919308 atatttgtacaaccattttgttataatttttg-gacaactttctctctcatactcgcatta 3919367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 9567016 - 9566964
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | | || ||||||||||||||| ||||| ||||||||||||    
T  9567016 acaaccattttttgacaacttttgtgacaactttctctctcatactcacatta 9566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 10890097 - 10890049
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  10890097 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 10890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 12999885 - 12999826
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || |||||| |||||||| ||||| ||||||||||||    
T  12999885 atatttgtacaaccattttctaacaacttttgt-acaactttctctctcatactcacatta 12999826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 13489682 - 13489730
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  13489682 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 13489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 15059647 - 15059707
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | ||  ||| |||||||||| ||||| ||||||||||||    
T  15059647 atatttgtacaaccattttattacaaaatttttgacaactttctctctcatactcacatta 15059707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 15470112 - 15470060
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | |||| |||| |||||||||| ||||| ||||||||||||    
T  15470112 acaaccatttttttataacttttttgacaactttctctctcatactcacatta 15470060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 15705113 - 15705065
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  15705113 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 15705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 27352638 - 27352697
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | |||| ||||| ||||||||| ||||| ||||||||||||    
T  27352638 atatttgtacaaccattttgtgataacttttg-gacaactttctctctcatactcacatta 27352697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30439258 - 30439317
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  30439258 atatttgtacaaccaatttatgacaattttt-tgacaactttatctctcatactcacatta 30439317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30973560 - 30973620
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||| |||| ||| |||||||||||||||||| ||| | ||||||| ||||    
T  30973560 atatttgtacaacccttttctaacaatttttgtgacaactttctctttcatactcatatta 30973620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 33076127 - 33076187
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || |||| |||||||||| ||| | ||||||||||||    
T  33076127 atatttgtacaaccattttctaacaacttttatgacaactttctctatcatactcacatta 33076187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 34157528 - 34157586
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||||||||||| | |||||||| ||||| ||||||||||||    
T  34157528 atatttgtacaaccatttt-taataattttt-taacaactttatctctcatactcacatta 34157586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 37619560 - 37619611
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||    
T  37619560 acaaccatttt-tgataacttttgtgacaactttctctctcatactcacatta 37619611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 44112462 - 44112521
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  44112462 atatttgtacaaccactttattacaattttt-tgacaactttctctctcatactcacatta 44112521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 44641966 - 44641907
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  44641966 atatttgtacaaccactttattacaattttt-tgacaactttctctctcatactcacatta 44641907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 45042269 - 45042328
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| ||| ||||||| |||||| ||||||||| ||||||||||||    
T  45042269 atatttgtacaactattttctaacaattttt-tgacaattttttctctcatactcacatta 45042328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 47113282 - 47113341
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| ||||||  ||||||||||| ||||||||| ||||| ||||||||||||    
T  47113282 atatttgtacaatcattttgcaataatttttg-gacaactttctctctcatactcacatta 47113341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 49931561 - 49931621
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||| ||| || ||||||||||||||| ||||| ||| ||||||||    
T  49931561 atatttgtacaatcattttttaacaacttttgtgacaactttctctctcatattcacatta 49931621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 50775196 - 50775160
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  50775196 aatttttgtgacaactttctctctcatactcacatta 50775160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 52267235 - 52267271
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  52267235 aatttttgtgacaactttctctctcatactcacatta 52267271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 52362502 - 52362550
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  52362502 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 52362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 52369174 - 52369115
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| | ||||| |||| |||| |||||||||||||||| ||||||||||||    
T  52369174 atatttgtacaactactttattataactttt-tgacaactttttctctaatactcacatta 52369115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 12784462 - 12784406
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12784462 atatttgtacaaccattttataataatttttgtgacaactttctctctcatactcac 12784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 45420143 - 45420309
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnn-ctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||| ||||||||||| ||| |||||| | ||| ||||||||| ||        |||||||||| |||| ||||  | |||||||    
T  45420143 atatttgtacaaccattttttaataatttttatgataactttctatctcatactcacaatatatttttactttctttctctattactttgatatttgtgc 45420242  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||||||||| |  |||||||||||||| | |||||| | | |||| |||||||||| |||||||||||    
T  45420243 caatacatattt--ttctttgtaaaaatgtggttgtctatttagttgtcaaataaattgatgttcaaat 45420309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 2842946 - 2842886
Alignment:
Q  54 aaatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||||| |||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||    
T  2842946 aaatatttgtacaaccattttgtaataattttggtgacaactttctctctcatactcacat 2842886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 9634487 - 9634439
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  9634487 ccattttatgataatttttgtgacaactttttctctcatactcacatta 9634439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 14328389 - 14328449
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||| ||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  14328389 atatatgtacaacaattttctaacaacttttgtgacaactttttctctcatactcacatta 14328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 14499087 - 14499027
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  14499087 atatttgtacaaccattttataacaatttttgtgacaattttctctcatatactcacatta 14499027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 26290914 - 26290854
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||    
T  26290914 atatttgtacaaccattttttaataatttttgtgataaccttctctcttatactcacatta 26290854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 9936303 - 9936248
Alignment:
Q  168 tttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  9936303 tttctttgtaaaaatatagttgtcacatagattgtcaaataaatagatgttcaaat 9936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 21738679 - 21738545
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgc 154  Q
    |||| |||||||||||||| ||||||||||||||| || ||| ||||| ||||||||||||        |||||||||   |||||||| ||||||||||    
T  21738679 atatttgtacaaccattttctaataatttttgtgataattttctctctcatactcacattatatttttactttctttc--aattgctttggtttttgtgc 21738582  T
Q  155 caatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    ||  ||| |||| |||||||||||||||||  |||||||    
T  21738581 ca--acacatatttttctttgtaaaaatatgattgtcaa 21738545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 14500948 - 14500895
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  14500948 tacaaccattttataacaatttttgtgacaattttttctcatataatcacatta 14500895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24766160 - 24766220
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| |||||| ||||||||||||||| ||||  ||||||||||||    
T  24766160 atatttgtacaaccattttttaataacttttgtgacaactttatctcgcatactcacatta 24766220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 4657323 - 4657369
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  4657323 attttctaataatttttgtgacaattttttctcttatattcacatta 4657369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 34431876 - 34431830
Alignment:
Q  70 attttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  34431876 attttgtaacaatttttgtgacaactttctctcttatactcacatta 34431830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 42532792 - 42532742
Alignment:
Q  66 aaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||| ||||||||||||||| | ||| ||||||||||||    
T  42532792 aaccattttataataacttttgtgacaactttctttctcatactcacatta 42532742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 1416089 - 1415936
Alignment:
Q  69 cattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatatatct 168  Q
    |||||||| |||||||||||||||| ||||||||| ||||| ||||||        ||| | ||| |||||||||||||||||| | ||| | ||| | |    
T  1416089 cattttatgataatttttgtgacaattttttctctcatacttacattactttttaatttatctctctattgctttagtttttgtacaaatgcctattttt 1415990  T
Q  169 ttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    |||||| | ||| ||| ||||||  |||| ||||||| ||||||  |||||||||    
T  1415989 ttctttat-aaattatggttgtcctataaattatcaactaaataattgttcaaat 1415936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 6336260 - 6336394
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgcc 155  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||| ||||        ||| | ||| ||| ||||| |||||||||||    
T  6336260 atatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcatattatatttttattt-tctctctatcgctttggtttttgtgcc 6336358  T
Q  156 aatacatatatctttctttgtaaaaatatagttgtcaa 193  Q
    |  ||| |||  ||||||||||||||||| ||||||||    
T  6336359 a--acacatacttttctttgtaaaaatatggttgtcaa 6336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 1907828 - 1907780
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctct 103  Q
    ||||| |||||||| ||||| |||||||||||||||||||||| |||||    
T  1907828 aatatttgtacaactattttttaataatttttgtgacaactttatctct 1907780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 35334528 - 35334584
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| ||||||||||||||||||||| |||||| |||| | ||||||| ||||||||    
T  35334528 atatttgtacaaccattttataataacttttgtaacaattctttctctcatactcac 35334584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 40210123 - 40210071
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||    
T  40210123 acaactatttttaaataatttttgtgacaactttctctctcatactcacatta 40210071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 41042270 - 41042321
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  41042270 acaaccatttt-taacaacttttgtgacaactttttctctcatactcacatta 41042321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 43057080 - 43057132
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||| ||| ||| || ||||||||||||||| ||||||||||||||||||    
T  43057080 acaaccactttttaacaacttttgtgacaactttctctcttatactcacatta 43057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 44050028 - 44050144
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtgccaata 159  Q
    |||||||||||||||| | || |||||||||||| || ||||| ||||||||||||        |||||||||| ||||||||| ||||  ||| |||||    
T  44050028 tgtacaaccattttatgacaacttttgtgacaaccttctctctcatactcacattatgtttttactttctttctttattgctttggtttccgtgtcaata 44050127  T
Q  160 catatatctttctttgtaaa 179  Q
    |||||   ||||||||||||    
T  44050128 catat---tttctttgtaaa 44050144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 45259348 - 45259292
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| |||||| ||||||| ||| |||||||||||||||||||| ||| ||||||||    
T  45259348 atatttgtacatccattttctaacaatttttgtgacaactttttatctcatactcac 45259292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 7502491 - 7502436
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactca 111  Q
    |||| |||||||||||||| | | |||||||||||||||||| ||||| |||||||    
T  7502491 atatttgtacaaccattttttgacaatttttgtgacaactttctctctcatactca 7502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 11091409 - 11091362
Alignment:
Q  69 cattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||| |||||||| |||||||||||| |||| |||||||    
T  11091409 cattttataataacttttgtgataactttttctctcatacccacatta 11091362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 19916671 - 19916722
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatt 115  Q
    ||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||    
T  19916671 acaaccactttttaataatttttgtgacaactttctctctcatacacacatt 19916722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 5031931 - 5031989
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| || ||||| ||||||||| ||||| ||||||||||    
T  5031931 atatttgtacaaccattttgtaacaacttttgcgacaactttctctctcatactcacat 5031989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 5054638 - 5054676
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  5054638 ataacttttgtgacaactttttctctcatactcacatta 5054676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 6895927 - 6895961
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacat 114  Q
    |||||||||||||||||| ||||||||||||||||    
T  6895927 aatttttgtgacaactttctctcttatactcacat 6895961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 12070857 - 12070903
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctc 102  Q
    |||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  12070857 atatatgtacaatcattttctaacaatttttgtgacaactttctctc 12070903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 29449229 - 29449279
Alignment:
Q  66 aaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||| || |||| |||||||||| ||||| ||||||||||||    
T  29449229 aaccattttataacaacttttatgacaactttctctctcatactcacatta 29449279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Original strand, 31578468 - 31578502
Alignment:
Q  82 tttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||| ||||||||||||    
T  31578468 tttttgtgacaactttttctctcatactcacatta 31578502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 40358168 - 40358122
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||||| ||||| |||||||||||||||||| ||||||||| |||||    
T  40358168 tacaactattttttaataatttttgtgacaattttttctctcatact 40358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 44484719 - 44484662
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| ||| ||||||||| |||||||| ||||| ||||||||||    
T  44484719 atatttgtacaaccattttgtaacaatttttgt-acaactttctctctcatactcacat 44484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 9936406 - 9936365
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||||||||||||||||||||||||||||| | | |||||||    
T  9936406 ccattttataataatttttgtgacaactttcttttttatact 9936365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 9990725 - 9990758
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||||||||||||||||    
T  9990725 ttttgtgacaactttctctcttatactcacatta 9990758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 42075423 - 42075366
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcaca 113  Q
    |||| |||||||| ||| ||||| || ||||||||||||||| |||||||| ||||||    
T  42075423 atatttgtacaacaattctataacaacttttgtgacaactttctctcttattctcaca 42075366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 42866785 - 42866818
Alignment:
Q  83 ttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||| ||||||||||||    
T  42866785 ttttgtgacaactttttctctcatactcacatta 42866818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 43487395 - 43487484
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtg 153  Q
    ||||||||||| || ||||||||||||||||||| ||||| || |||||||||        |||||||||| ||||||||| |||||||||    
T  43487395 acaaccatttttta-taatttttgtgacaactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtg 43487484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4723574 - 4723633
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| ||| || |||| | |||||||| ||||| ||||||||||||    
T  4723574 atatatgtacaaccattttttaacaactttt-ttacaactttctctctcatactcacatta 4723633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 6999119 - 6999071
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| | || ||||||||||||||| ||||| ||||||||||||    
T  6999119 ccattttatgacaacttttgtgacaactttctctctcatactcacatta 6999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 7498054 - 7497995
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| | || |||| |||||||||| ||||| ||||||||||||    
T  7498054 atatttgtacaaccattttattacaactttt-tgacaactttctctctcatactcacatta 7497995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 9760033 - 9760085
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| ||  | |||||||||||||||| ||||| ||||||||||||    
T  9760033 acaaccattttttacaactttttgtgacaactttctctctcatactcacatta 9760085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 11980659 - 11980718
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || |||| |||||||||||| ||| ||||||||||||    
T  11980659 atatttgtacaaccattttctaacaactttt-tgacaactttttatctcatactcacatta 11980718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 12498675 - 12498639
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  12498675 aatttttgtgacaactttttctctcatactcatatta 12498639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 12600056 - 12600115
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||| | |||||||| ||||||||||| ||||| ||||||||||||    
T  12600056 atatttgtacaaccactttgtgataatttt-gtgacaactttctctctcatactcacatta 12600115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 22888861 - 22888825
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  22888861 aatttttgtgacaactttctctctcatactcacatta 22888825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 25881576 - 25881612
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  25881576 aatttttgtgacaactttctctctcatactcacatta 25881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 31635873 - 31635814
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || |||| |||||||||| ||||| ||||||||||||    
T  31635873 atatttgtacaaccattttctaacaactttt-tgacaactttctctctcatactcacatta 31635814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 34373013 - 34373072
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||||   ||||||||||| |||||||| ||||| ||||||||||||    
T  34373013 atatttgtacaaccattttggtataatttttgt-acaactttctctctcatactcacatta 34373072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 44987647 - 44987707
Alignment:
Q  141 tttagtttttgtgccaatacatatatctttctttgtaaaa-atatagttgtcaaataagtt 200  Q
    ||||||||| |||||||||   |||| ||||||||||||| ||| ||||||||||||||||    
T  44987647 tttagttttcgtgccaatatccatatttttctttgtaaaatatacagttgtcaaataagtt 44987707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 31469052 - 31468992
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| |||||||| |||||||||    
T  31469052 atatatgtacaaccattttctaacaatttttgtgacaattttctctcttatgctcacatta 31468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 19165485 - 19165329
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatac 160  Q
    |||||||||||||||||| || |||||||| |||||| ||||  ||||||||||||        || || ||| ||||| ||| ||||||||||||||||    
T  19165485 tgtacaaccattttataacaacttttgtgagaactttatctc--atactcacattatattt---ttactctctctattgttttggtttttgtgccaatac 19165391  T
Q  161 atatatctttctttgtaaaaatatagttgtcaaata-agttatcaaataaatagatgttcaaat 223  Q
      |||| ||||||||||||||||| |||||| | || | || ||||| |||| |||||||||||    
T  19165390 --atatttttctttgtaaaaatatggttgtccattagatttgtcaaacaaattgatgttcaaat 19165329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 34363561 - 34363621
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||| |||||||||||| || |||||||| |||||| ||||| ||||||||||||    
T  34363561 atatatgtacgaccattttataacaacttttgtgataactttatctctcatactcacatta 34363621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 34995328 - 34995384
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| |||||||||||||| ||| || |||||||||| |||||||||||||||||||    
T  34995328 atatttgtacaaccattttgtaacaacttttgtgacatctttttctcttatactcac 34995384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 40722027 - 40721970
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  40722027 atatttgtacatccattttataataatttttg-gacaactttctctctcatactcacat 40721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 47288090 - 47288144
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactc 110  Q
    |||| |||||||||||||| ||| |||||||||||||||||| ||||| ||||||    
T  47288090 atatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactc 47288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 49585013 - 49585062
Alignment:
Q  67 accattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||| |||||||||||| ||||||||| ||||| ||||||||||||    
T  49585013 accattttctaataatttttgggacaactttctctctcatactcacatta 49585062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9472576 - 9472517
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  9472576 atatttgtacaactattttctaataattttt-tgacaactttctctctcatactcacatta 9472517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 13139168 - 13139216
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  13139168 ccattttatgataatttttatgacaactttctctctcatactcacatta 13139216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 29175258 - 29175294
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29175258 aatttttgtgacaactttttctctcatactcacatta 29175294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 39158121 - 39158173
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||| | |||||||||||||||||||| ||||| ||||||||||||    
T  39158121 acaatcattttttgataatttttgtgacaactttctctctcatactcacatta 39158173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 40308449 - 40308508
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||| |||||||||||||||||| |||||||||| ||| | ||||||||||||    
T  40308449 atatttgtacaatcattttataataattttt-tgacaactttctctttcatactcacatta 40308508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 44257793 - 44257733
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||| ||| |||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  44257793 atatttgtgcaatcattttctaacaatttttgtgacaactttctctctcatactcacatta 44257733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 52895235 - 52895295
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||||||| || | |||||||||||||||||| ||||| ||| ||||||||    
T  52895235 atatttgtacaaccatttcatgacaatttttgtgacaactttatctctcataatcacatta 52895295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 149526 - 149450
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta-nnnnnnnctttctttctatattgctttagtttttgtg 153  Q
    |||||||||||||||||||| ||||| ||||||||||||        |||||| ||| |||||||||||||||||||    
T  149526 ataatttttgtgacaactttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtg 149450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 2575743 - 2575688
Alignment:
Q  168 tttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||||||||| | ||||||||| | ||||| ||| ||||||||||||||||||    
T  2575743 tttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaat 2575688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 15985264 - 15985323
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||| |||||||||||||| ||| ||||||||| |||||||| ||||| ||||| ||||    
T  15985264 aatatttgtacaaccattttttaacaatttttgttacaactttctctctcatactaacat 15985323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 24990127 - 24990181
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||| ||||    
T  24990127 tgtacaaccattttaaaataatttt-gtgacaattttttttcttatactcaaatta 24990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 3078971 - 3078913
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| ||||||| |||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  3078971 atatttgtacaatcattttgtaacaacttttgtgacaactttctctctcatactcacat 3078913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 15522362 - 15522420
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||||||||||||||||| ||| || |||||||| |||||| |||||  |||||||||    
T  15522362 atatatgtacaaccattttctaacaacttttgtgataactttctctctcctactcacat 15522420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 37514195 - 37514137
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||| ||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  37514195 atatttgtacatccattttgtaacaacttttgtgacaactttctctctcatactcacat 37514137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 38519809 - 38519859
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    ||||||||||| | | |||||||||||||||||| ||||| ||||||||||    
T  38519809 acaaccattttttgacaatttttgtgacaactttctctctcatactcacat 38519859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 42815412 - 42815470
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||| ||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  42815412 atatttgtacaactattttgtaacaacttttgtgacaactttctctctcatactcacat 42815470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 45548847 - 45548790
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||| | ||||||||| |||||||||||||| | ||||||||||    
T  45548847 atatttgtacaaccattttgtgataattttt-tgacaactttttctttcatactcacat 45548790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 46212999 - 46213037
Alignment:
Q  78 ataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  46212999 ataatttttgtgacaactttttctctcgtactcacatta 46213037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 54165224 - 54165167
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacat 114  Q
    |||| |||||||||||||||  | ||||||| |||||||||||||||| ||||||||||    
T  54165224 atatttgtacaaccattttactacaattttt-tgacaactttttctctcatactcacat 54165167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 624341 - 624232
Alignment:
Q  90 acaactttttctcttatactcacattannnnnnnctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttg 189  Q
    |||||||| ||||| ||||||||||||       |||| | ||| ||||||| | ||||| ||||||||||   | | ||||||||||||||||| ||||    
T  624341 acaactttctctctcatactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttt-tttctttgtaaaaatatggttg 624243  T
Q  190 tcaaataagtt 200  Q
    |||||||||||    
T  624242 tcaaataagtt 624232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 1799618 - 1799557
Alignment:
Q  55 aatatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| | ||||||||| | |||||||| ||| ||||| | ||||||    
T  1799618 aatatatgtacaaccattttttgataatttttataacaactttctcttttatatttacatta 1799557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 54802660 - 54802596
Alignment:
Q  135 tattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaaataagtt 200  Q
    |||||||||| |||| ||| |||||| ||| | ||||||| ||||| |||||||||||||||||||    
T  54802660 tattgctttaattttcgtgtcaatacctattt-tttctttataaaactatagttgtcaaataagtt 54802596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 1796045 - 1795985
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| ||| || |||||||| |||||| ||||| ||||||||||||    
T  1796045 atatttgtacaacaattttttaacaacttttgtgataactttatctctcatactcacatta 1795985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 3218680 - 3218648
Alignment:
Q  62 gtacaaccattttataataatttttgtgacaac 94  Q
    |||||||||||||||||||| ||||||||||||    
T  3218680 gtacaaccattttataataacttttgtgacaac 3218648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 5249876 - 5249936
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||| |||||||||||| | ||  |||||||||||||| ||||| ||||||||||||    
T  5249876 atatttgtgcaaccattttatgacaacatttgtgacaactttctctctcatactcacatta 5249936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 17805460 - 17805519
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| ||||| ||||||||||| |||||| ||| ||||| ||||||||||||    
T  17805460 atatttgtacaactattttttaataattttt-tgacaattttctctctcatactcacatta 17805519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 27051141 - 27051090
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| || |||||||||||| |||||| ||||| ||||||||||||    
T  27051141 acaaccatttttta-taatttttgtgataactttctctctcatactcacatta 27051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 32546396 - 32546360
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  32546396 aatttttgttacaactttttctctcatactcacatta 32546360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 34114180 - 34114125
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcac 112  Q
    |||| |||||||| ||||||| |||| |||| |||||||||||||||| ||||||||    
T  34114180 atatttgtacaactattttattataactttt-tgacaactttttctctcatactcac 34114125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 35332714 - 35332773
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| ||||||||| ||| |||||| ||||| ||||||||||||    
T  35332714 atatttgtacaaccactttatgataattttt-tgataactttctctctcatactcacatta 35332773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 36444458 - 36444399
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| |||| |||| | |||||||| ||||| ||||||||||||    
T  36444458 atatttgtacaaccattttatgataactttt-taacaactttctctctcatactcacatta 36444399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 37295057 - 37295138
Alignment:
Q  140 ctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtcaaataagttatcaaataaatagatgttcaaat 223  Q
    ||||||||||||  ||| |||||| ||  ||||||||||||||||| ||||||  ||  || ||||| ||||||||||||||||    
T  37295057 ctttagtttttgcaccagtacatacat--ttctttgtaaaaatataattgtcacctagattgtcaaacaaatagatgttcaaat 37295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 40609630 - 40609678
Alignment:
Q  68 ccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| || |||| ||||||||||||||| ||||| ||||||||||||    
T  40609630 ccatttaatgataacttttgtgacaactttctctctcatactcacatta 40609678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 42916666 - 42916718
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||||||| || ||||||| ||||||| | ||| ||||||||||||    
T  42916666 acaaccattttataacaacttttgtgtcaactttctttctcatactcacatta 42916718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 48326576 - 48326608
Alignment:
Q  84 tttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||||||||| ||||||||||||    
T  48326576 tttgtgacaactttttctctcatactcacatta 48326608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 55609228 - 55609169
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||  || ||||||||||||||| ||||| ||||||||||||    
T  55609228 atatttgtacaaccattttgtac-aacttttgtgacaactttctctctcatactcacatta 55609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 56474803 - 56474767
Alignment:
Q  80 aatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  56474803 aatttttgtgacaattttctctcttatactcacatta 56474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 469701 - 469641
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||||| | ||||||||||    
T  469701 atatttgtacaaccattttttgataatttttgtgacaactttctctctcacactcacatta 469641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 12510 - 12565
Alignment:
Q  61 tgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| ||||||||| ||| |||||||||||||||||| ||||||||||||| ||||    
T  12510 tgtataaccattttctaacaatttttgtgacaactttctctcttatactcatatta 12565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 10798 - 10739
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||||    
T  10798 atatttgtacaaccactttattacaattttt-tgacaactttttctctcatactcacatta 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 9784 - 9844
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||| | ||||| ||||||    
T  9784 atatttgtacaaccatttttttataatttttgtgacaactttctctttcatacttacatta 9844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 26437 - 26489
Alignment:
Q  64 acaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||| |||||| |||| ||||||||||| ||||| ||||||||||||||||    
T  26437 acaaccgttttatgataacttttgtgacaattttttttcttatactcacatta 26489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 20084 - 20136
Alignment:
Q  63 tacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||||| |||||    
T  20084 tacaaccattttgtaataattttt-tgacaactatttttcttatactcgcatta 20136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 404756 - 404808
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatact 109  Q
    |||| ||||||| |||||| ||| ||||||| ||||||||||||||||||||||    
T  404756 atatgtgtacaatcattttttaacaattttt-tgacaactttttctcttatact 404808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 27347 - 27406
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    ||||||||||| ||||||| | | ||||||| |||||||||| ||||| ||||||||||||    
T  27347 atatatgtacatccattttgtgacaattttt-tgacaactttctctctcatactcacatta 27406  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4323 - 4382
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||||| |||| |||| |||||||||| | ||| ||||||||||||    
T  4323 atatttgtacaaccattttatgataactttt-tgacaactttctatctcatactcacatta 4382  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 36010 - 36069
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||| | ||| | ||||||||| |||||||||| ||||||||||||||||||    
T  36010 atatttgtacaactactttgtgataattttt-tgacaactttctctcttatactcacatta 36069  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 199274 - 199333
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||| ||||| | ||||||| |||||||||| ||||| ||||||||||||    
T  199274 atatttgtacaaccactttattacaattttt-tgacaactttctctctcatactcacatta 199333  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 94876 - 94811
Alignment:
Q  124 ctttctttctatattgctttagtttttgtgccaatacatatatctttctttgtaaaaatatagttgtc 191  Q
    |||||| ||| |||| ||||  ||||||||| ||||||||| |  |||||||||||||||||||||||    
T  94876 ctttctctctctattactttgatttttgtgctaatacatattt--ttctttgtaaaaatatagttgtc 94811  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 366302 - 366361
Alignment:
Q  56 atatatgtacaaccattttataataatttttgtgacaactttttctcttatactcacatta 116  Q
    |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||| ||||||||    
T  366302 atatttgtacaaccatttt-taacaacttttgtgacaactttctctctcatattcacatta 366361  T

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