View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9208_low_1 (Length: 985)

Name: NF9208_low_1
Description: NF9208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9208_low_1
NF9208_low_1
[»] chr3 (9 HSPs)
chr3 (12-894)||(43616161-43617043)
chr3 (223-502)||(43609928-43610206)
chr3 (223-490)||(43603531-43603798)
chr3 (649-811)||(43609698-43609861)
chr3 (641-811)||(43603290-43603461)
chr3 (822-892)||(42914485-42914555)
chr3 (896-934)||(29438417-29438455)
chr3 (894-934)||(43615840-43615880)
chr3 (823-894)||(29313137-29313208)
[»] chr2 (1 HSPs)
chr2 (823-894)||(32532765-32532836)
[»] chr5 (5 HSPs)
chr5 (823-894)||(4870217-4870288)
chr5 (823-894)||(3631947-3632018)
chr5 (852-894)||(13106135-13106177)
chr5 (823-894)||(2977233-2977304)
chr5 (852-894)||(13036145-13036187)
[»] chr8 (2 HSPs)
chr8 (822-894)||(33285070-33285142)
chr8 (894-934)||(25430942-25430982)
[»] chr7 (4 HSPs)
chr7 (893-934)||(31642754-31642795)
chr7 (894-934)||(44598579-44598619)
chr7 (894-931)||(9698211-9698248)
chr7 (851-894)||(23705386-23705429)
[»] chr4 (1 HSPs)
chr4 (894-931)||(13564588-13564625)
[»] chr1 (4 HSPs)
chr1 (894-931)||(171039-171076)
chr1 (894-934)||(52453836-52453876)
chr1 (823-894)||(46906000-46906071)
chr1 (846-879)||(26673786-26673819)
[»] chr6 (1 HSPs)
chr6 (894-934)||(14533644-14533684)


Alignment Details
Target: chr3 (Bit Score: 842; Significance: 0; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 842; E-Value: 0
Query Start/End: Original strand, 12 - 894
Target Start/End: Complemental strand, 43617043 - 43616161
Alignment:
Q  12 gtttggtgttagcttagttgtgagaatttgacattgtaacctttaggaaaagaaattcaaatttcatgttgtaaaattgtcattactctcacttcaatta 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43617043 gtttggtgttagcttagttgtgagaatttgacattgtaacctttaggaaaagaaattcaaatttcatgttgtaaaattgtcattactctcacttcaatta 43616944  T
Q  112 ataattatttttctgttcactaaattttgttnnnnnnnttatcgataacgcagagaattcataatgtaacacaaatgttttcatcattctagaccttata 211  Q
    |||||||||||||||||||||||||||||||       ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616943 ataattatttttctgttcactaaattttgttaaaaaaattatccatgacgcagagaattcataatgtaacacaaatgttttcatcattctagaccttata 43616844  T
Q  212 ccgcaaattgaaattaaattaatggtacctgaagtacaagccacaagctccacatgatggtgcctaggaacaagagtaaagcacccaaaatccatttttt 311  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616843 ccacaaattgaaattaaattaatggtacctgaagtacaagccacaagctccacatgatggtgcctaggaacaagagtaaagcacccaaaatccatttttt 43616744  T
Q  312 gtcatatgattcatgatattcatgttcttgattgttgtgatgatatccagatagaagatgacgcgcgatccgtaattggggtcccttgtaaaatgccaga 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616743 gtcatatgattcatgatattcatgttcttgattgttgtgatgatatccagatagaagatgacgcgcgatccgtaattggggtcccttgtaaaatgccaga 43616644  T
Q  412 atcgctacaccggccatgcacaataatacacttcctatctttgaaattccagattttgtccttaaatttaccttctccactctgcaatataccatgagca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616643 atcgctacaccggccatgcacaataatacacttcctatctttgaaattccagattttgtccttaaatttaccttctccactctgcaatataccatgagca 43616544  T
Q  512 actctaattaattcaccacatcataactcatatcaacattagctatataagtcttacagtattccttcatgtaatcaacattctctttacgaataaaatt 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616543 actctaattaattcaccacatcataactcatatcaacattagctatataagtcttacagtattccttcatgtaatcaacattctctttacgaataaaatt 43616444  T
Q  612 tttatattacttttctgtaatgaagcttagatgaaaattaatgtggttttccaaaatttacctgagcataacagcaaagaagaatgttgaagccggaaga 711  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616443 tttatattacttttctgtaatgaagcttagatgaaaattaatgtggttttccaaaatttacctgagcataacagcaaagaagaatgttgaagccggaaga 43616344  T
Q  712 cagttaacaattgcagcagccaacatagcagacgtgtaagcaagagcaataccattcacattcaaagttaaagtaattctgaaaaacaacaaagtaggat 811  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616343 cagttaacaattgcagcagccaacatagcagacgtgtaagcaagagcaataccattcacattcaaagttaaagtaattctgaaaaacaacaaagtaggat 43616244  T
Q  812 cattgacccgattaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616243 catagacccgattaattcaaggtcctctcaattcttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 43616161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 223 - 502
Target Start/End: Complemental strand, 43610206 - 43609928
Alignment:
Q  223 aattaaattaatggtacctgaagtacaagccacaagctccacatgatggtgcctaggaacaagagtaaagcacccaaaatccattttttgtcatatgatt 322  Q
    |||||||||| || |||||||||||||| |||||| |||||  | |||||   ||||||||||||||||| |||||||||||||||||||||||||||||    
T  43610206 aattaaatta-tgctacctgaagtacaatccacaaactccaggtaatggtagttaggaacaagagtaaagaacccaaaatccattttttgtcatatgatt 43610108  T
Q  323 catgatattcatgttcttgattgttgtgatgatatccagatagaagatgacgcgcgatccgtaattggggtcccttgtaaaatgccagaatcgctacacc 422  Q
    ||  || |||||||| ||||| ||||||||||||||||||| | || ||||| || || || |||||||||||||||||||| |||||||||||||||||    
T  43610107 cactatcttcatgttgttgatagttgtgatgatatccagatgggaggtgacgtgcaattcgcaattggggtcccttgtaaaaggccagaatcgctacacc 43610008  T
Q  423 ggccatgcacaataatacacttcctatctttgaaattccagattttgtccttaaatttaccttctccactctgcaatata 502  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  43610007 ggccatgcacaataaaacactccctatctttgaaattccagattttgtccttatatttaccttctccactctacaatata 43609928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 223 - 490
Target Start/End: Complemental strand, 43603798 - 43603531
Alignment:
Q  223 aattaaattaatggtacctgaagtacaagccacaagctccacatgatggtgcctaggaacaagagtaaagcacccaaaatccattttttgtcatatgatt 322  Q
    |||||||| || |||||||||| ||||| |||||| ||||||||||  ||| ||||||||||||| |||| |||||||||||||||||| |||| |||||    
T  43603798 aattaaataaacggtacctgaaatacaatccacaaactccacatgactgtggctaggaacaagaggaaagaacccaaaatccattttttctcatgtgatt 43603699  T
Q  323 catgatattcatgttcttgattgttgtgatgatatccagatagaagatgacgcgcgatccgtaattggggtcccttgtaaaatgccagaatcgctacacc 422  Q
    ||  || || ||||| ||||| ||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||||||||||||||||||||||| |||||    
T  43603698 cactatctttatgttgttgatagttgtgatgatatccagataggagatgccgcgcaatccgtatttgaggtcccttgtaaaatgccagaatcgcaacacc 43603599  T
Q  423 ggccatgcacaataatacacttcctatctttgaaattccagattttgtccttaaatttaccttctcca 490  Q
     ||||| ||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  43603598 agccatacacaataatacactcactatctttgaaattccagatattgtccttatatttaccttttcca 43603531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 649 - 811
Target Start/End: Complemental strand, 43609861 - 43609698
Alignment:
Q  649 ttaatgtggttttccaaaatttacctgagcataacagcaaagaagaatgttgaagccggaagacagttaacaattgcagcagccaacatagcagacgtgt 748  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||| || ||||||||| || |    
T  43609861 ttaatgtggttttcaaaaatttacctgagcagaacagcaaagaagaatgtcgaagccggaagacaattaacaattgcaccagacagcatagcagaagtat 43609762  T
Q  749 aagcaagagcaataccattcacattcaaagttaaagtaattctgaaaaa-caacaaagtaggat 811  Q
    ||| |||||||| ||||| |||||||| ||||||||||| ||||||||| |||| |||||||||    
T  43609761 aagaaagagcaacaccatgcacattcagagttaaagtaagtctgaaaaagcaaccaagtaggat 43609698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 641 - 811
Target Start/End: Complemental strand, 43603461 - 43603290
Alignment:
Q  641 gatgaaaattaatgtgg-ttttccaaaatttacctgagcataacagcaaagaagaatgttgaagccggaagacagttaacaattgcagcagccaacatag 739  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||  |||| ||||| || |||||||| ||||||||||||  ||    
T  43603461 gatgaaaattaatgttgattttccaaaatttacctgagcagaacagcaaagaagaatgtacaagcaggaaggcaattaacaatagcagcagccaacgaag 43603362  T
Q  740 cagacgtgtaagcaagagcaataccattcacattcaaagttaaagtaattctgaaaaacaacaaagtaggat 811  Q
    |||| |||||| |||| |||||||||| |||||||| || ||||||||||||||||| |||| ||| |||||    
T  43603361 cagaagtgtaaacaagggcaataccatgcacattcagagctaaagtaattctgaaaagcaaccaagaaggat 43603290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 822 - 892
Target Start/End: Original strand, 42914485 - 42914555
Alignment:
Q  822 attaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctcctta 892  Q
    ||||||||||| |||||  |||  ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  42914485 attaattcaagctcctcctaatgcttgacatgtttatgcaactatcattagaaatatcaatgatctcctta 42914555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 896 - 934
Target Start/End: Complemental strand, 29438455 - 29438417
Alignment:
Q  896 ttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29438455 ttttaaatacaatatgcaataatagaagattaaacaagt 29438417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 894 - 934
Target Start/End: Complemental strand, 43615880 - 43615840
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  43615880 ttttttaaatacgatattgaataatagaagattaaacaagt 43615840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 894
Target Start/End: Original strand, 29313137 - 29313208
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    |||||||||| ||| || |||  ||| ||||||||||| |||||||| |||||||| || ||||||||||||    
T  29313137 ttaattcaagctccccttaatgcttgacatgtttatgccactatcatcagaaatattaaggatctccttaat 29313208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 823 - 894
Target Start/End: Complemental strand, 32532836 - 32532765
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32532836 ttaattcaagctcctctcaactcttggcatgtttatgcaactatcattagaaatatcaatgatctccttaat 32532765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 3e-20; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 823 - 894
Target Start/End: Complemental strand, 4870288 - 4870217
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  4870288 ttaattcaagctcctctcaatgcttgacatgtttatgcaactatcattagaaatatcaacaatctccttaat 4870217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 823 - 894
Target Start/End: Complemental strand, 3632018 - 3631947
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||||||||||  |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  3632018 ttaattcaagcccctctcaatgtttgacatgtttatgcaactatcattagaaacatcaacgatctccttaat 3631947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 894
Target Start/End: Complemental strand, 13106177 - 13106135
Alignment:
Q  852 tgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  13106177 tgtttatgcaattatcattagaaatattaacgatctccttaat 13106135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 894
Target Start/End: Original strand, 2977233 - 2977304
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    |||||||||| ||||||||||  ||||||| ||||||| |||||| | | |||| |||| ||||||||||||    
T  2977233 ttaattcaagttcctctcaatgcttggcatttttatgccactatcgtaaaaaatgtcaaggatctccttaat 2977304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 852 - 894
Target Start/End: Complemental strand, 13036187 - 13036145
Alignment:
Q  852 tgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  13036187 tgtttatacaactatcattaaaaatattaacgatctccttaat 13036145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 822 - 894
Target Start/End: Original strand, 33285070 - 33285142
Alignment:
Q  822 attaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||||||| ||| ||||| ||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  33285070 attaatttaagctcctcccaatgcttgacatgtttatgcaactatcattagaaatatcaacgatctgcttaat 33285142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 894 - 934
Target Start/End: Complemental strand, 25430982 - 25430942
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  25430982 tttttttaatacaatatgcaataatagaagattaaacaagt 25430942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 893 - 934
Target Start/End: Complemental strand, 31642795 - 31642754
Alignment:
Q  893 attttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  31642795 attttttaaatacaatatgcaataatagaagattaaacaagt 31642754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 894 - 934
Target Start/End: Complemental strand, 44598619 - 44598579
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  44598619 ttttttaaatacaatatgcaataatagaagattaaacaagt 44598579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 894 - 931
Target Start/End: Original strand, 9698211 - 9698248
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaaca 931  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9698211 ttttttaaatacaatatgcaataatagaagattaaaca 9698248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 851 - 894
Target Start/End: Complemental strand, 23705429 - 23705386
Alignment:
Q  851 atgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  23705429 atgtttatgcaactatcaatagaaatatcaatgatctctttaat 23705386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 894 - 931
Target Start/End: Original strand, 13564588 - 13564625
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaaca 931  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13564588 ttttttaaatacaatatgcaataatagaagattaaaca 13564625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 894 - 931
Target Start/End: Complemental strand, 171076 - 171039
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaaca 931  Q
    |||||||||||| |||||||||||||||||||||||||    
T  171076 ttttttaaatacaatatgcaataatagaagattaaaca 171039  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 894 - 934
Target Start/End: Original strand, 52453836 - 52453876
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  52453836 ttttttaaatacaatatgctataatagaagattaaacaagt 52453876  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 894
Target Start/End: Original strand, 46906000 - 46906071
Alignment:
Q  823 ttaattcaaggtcctctcaattgttggcatgtttatgcaactatcattagaaatatcaacgatctccttaat 894  Q
    ||||||||||  || ||||||| ||||||||||||||| |||| ||| |||||| | || ||||||||||||    
T  46906000 ttaattcaagcccccctcaattcttggcatgtttatgccactaccatcagaaatgttaaggatctccttaat 46906071  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 846 - 879
Target Start/End: Original strand, 26673786 - 26673819
Alignment:
Q  846 ttggcatgtttatgcaactatcattagaaatatc 879  Q
    |||||||||||||||||||| |||||||||||||    
T  26673786 ttggcatgtttatgcaactaacattagaaatatc 26673819  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 894 - 934
Target Start/End: Complemental strand, 14533684 - 14533644
Alignment:
Q  894 ttttttaaatacgatatgcaataatagaagattaaacaagt 934  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  14533684 ttttttaaatacaatatgcaacaatagaagattaaacaagt 14533644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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