View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9208_low_12 (Length: 249)
Name: NF9208_low_12
Description: NF9208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9208_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 16492635 - 16492872
Alignment:
| Q |
10 |
attattctcccttaaaatttctgtattacatttgtcaacctaattttcctgcactatatgacactattatgaatggaatagttggttttggatatcaatt |
109 |
Q |
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| T |
16492635 |
attattctcccttaaaatttctgtattacatttgtcaacctaattttcctgcaatgtatgacactattatgaatggaatagttggttttggatatcaatt |
16492734 |
T |
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| Q |
110 |
ttcatcttctggttgagaatgttgggattggtttaagattatatctgtatattaattatttggtttaagtataagaaattgtgatttttagaatatttgg |
209 |
Q |
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| T |
16492735 |
ttcatcttctggttgacaatgttgggattggtttaagattatatctgtatattaattatttggtttaagtataagaaattgtgatttttagaatatttgg |
16492834 |
T |
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| Q |
210 |
tttgatctgattatgctcttcatcaagctactacttgg |
247 |
Q |
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| T |
16492835 |
tttgatctgattatgctcttcatcaagctactacttgg |
16492872 |
T |
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