View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9210_low_4 (Length: 511)
Name: NF9210_low_4
Description: NF9210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9210_low_4 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 366; Significance: 0; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 12 - 495
Target Start/End: Original strand, 5136106 - 5136590
Alignment:
| Q |
12 |
tttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaag |
111 |
Q |
| |
|
|||||||||||| | ||||||| |||| | |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| |||| |||| |
|
|
| T |
5136106 |
tttttaaggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttctaaag |
5136205 |
T |
|
| Q |
112 |
ttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaat |
211 |
Q |
| |
|
|||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5136206 |
ttacagaagaaccttccgaaagaaaggttaaccaatttggataactatcaccaggaagcaaacaaccaccacttctattgacatctatattctgcaaaat |
5136305 |
T |
|
| Q |
212 |
ttcatcgaaatgtatgttaacttcaacttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttgacgttacagag |
311 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5136306 |
ttcattgaaatgtatgttaacttcaacttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttgacgttacagag |
5136405 |
T |
|
| Q |
312 |
aaatatttgcttggattcataaaaccaactatcagtcctacttatgaactccatacataccaaaataatagtgagggaaaataacgatagtaacaaattt |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5136406 |
aaatatttgcttggattcataaaaccaactatcagtcctacttatgaactccatacataccaaaataatagtgagggaaaataacgatagtaacaaattt |
5136505 |
T |
|
| Q |
412 |
taccgctctaaaatgcgctttttgaagcctgtaagtttgtaacag-nnnnnnnnncttcataaaaacaaagttcatacaaatgat |
495 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5136506 |
taccgctctaaaatgcgctttttgaagcctgtaagtttgtaacagttttttttttcttcataaaaacaaagttcatacaaatgat |
5136590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 495
Target Start/End: Original strand, 5100994 - 5101489
Alignment:
| Q |
1 |
tcactaatacgtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgagg |
100 |
Q |
| |
|
||||||| || |||||||||||| | ||||||| |||| | |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
5100994 |
tcactaacacatttttaaggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagg |
5101093 |
T |
|
| Q |
101 |
aacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctata |
200 |
Q |
| |
|
|||| |||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5101094 |
gacttctaaagttacagaagaaccttccgaaagaaaggttaaccaatttggataactatcaccaggaagcaaacaaccaccactactattgacatctata |
5101193 |
T |
|
| Q |
201 |
ttctgcaaaatttcatcgaaatgtatgttaacttcaacttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttg |
300 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5101194 |
ttctgcaaaattacattgaaatgtatgttaacttcaacttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttg |
5101293 |
T |
|
| Q |
301 |
acgttacagagaaatatttgcttggattcataaaaccaactatcagtcctacttatgaactccatacataccaaaataatagtgagggaaaataacgata |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5101294 |
acgttacagagaaatatttgcttggattcataaaaccaactatcagtcctacttatgaactccatacataccaaaataatagtgagggaaaataacgata |
5101393 |
T |
|
| Q |
401 |
gtaacaaattttaccgctctaaaatgcgctttttgaagcctgtaagtttgtaacag-nnnnnnnnncttcataaaaacaaagttcatacaaatgat |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5101394 |
gtaacaaattttaccgctctaaaatgcgctttttgaagcctgtaagtttgtaacagttttttttttcttcataaaaacaaagttcatacaaatgat |
5101489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 45 - 347
Target Start/End: Original strand, 5283432 - 5283750
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||||| | |||||||| || | ||||||||||||||||||||| |||||| | || |||| |
|
|
| T |
5283432 |
gttgaagtatagacaatgcacatcattgacttcaagttacacccttcaacttgagggacatcaaaagttacagaagaaccttctgaactaaaggtcaacc |
5283531 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg-----------------caaaatttcatcgaaatgtatg |
227 |
Q |
| |
|
||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| || || | |||| |
|
|
| T |
5283532 |
aatctggataactatcaccaggaagcaaacaatcaccactcctattgacatccatattctgtaaaagtaaggtatgctcaaaattttattgacaagtata |
5283631 |
T |
|
| Q |
228 |
ttaacttcaacttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttgacgttacagagaaatatttgcttggat |
327 |
Q |
| |
|
| || ||| |||||||||||||||||||| ||||| |||| || ||| |||||||| ||||||||||||||| |||||| | |||||||||||||||| |
|
|
| T |
5283632 |
taaatatcactttatcatttattcaacaattgaagatataac-ttcccttataaggtagttaatcatattttgatgttacaaataaatatttgcttggat |
5283730 |
T |
|
| Q |
328 |
tcataaaaccaactatcagt |
347 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
5283731 |
tcataaaacagactatcagt |
5283750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 5398165 - 5397962
Alignment:
| Q |
1 |
tcactaatacgtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgagg |
100 |
Q |
| |
|
||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||| |
|
|
| T |
5398165 |
tcactaacatgtttttaaggccactagatgttacattatccagagttgaagtatacacaatgcacatcattgtcttcaagttacgcccttccacatgagg |
5398066 |
T |
|
| Q |
101 |
aacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctata |
200 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | || || |||||||||||| ||| |||| |||| ||| |
|
|
| T |
5398065 |
aacttcaaaagttaaagaagaaccctcagaactataagttaaccaatttggataactatcgctggggaggaaacaaccaccattcccattgccatcgata |
5397966 |
T |
|
| Q |
201 |
ttct |
204 |
Q |
| |
|
|||| |
|
|
| T |
5397965 |
ttct |
5397962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 5427007 - 5426807
Alignment:
| Q |
13 |
ttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagt |
112 |
Q |
| |
|
||||||||||| | ||| ||||| || | | |||||||||||| | |||||||| |||||||||| ||||| |||| ||||||| |||||||||||||| |
|
|
| T |
5427007 |
ttttaaggccacttgatattacattaccaggggttgaagtatagactatgcacataattgtcttcaggttacgcccttccacttgtggaacttgaaaagt |
5426908 |
T |
|
| Q |
113 |
tacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaatt |
212 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
5426907 |
tacagaagaaccttcagaactataggttaaccactttggataactgtcaccaggaagcaaaaaactaccactcctattgagatccatattctgcaaaatt |
5426808 |
T |
|
| Q |
213 |
t |
213 |
Q |
| |
|
| |
|
|
| T |
5426807 |
t |
5426807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5351519 - 5351299
Alignment:
| Q |
1 |
tcactaatacgtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgagg |
100 |
Q |
| |
|
||||||| | ||||||||||||| | |||||||| || | | |||||||||||| | |||||||||||||||||||||| || |||| |||||||||| |
|
|
| T |
5351519 |
tcactaacatgtttttaaggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgagg |
5351420 |
T |
|
| Q |
101 |
aacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctata |
200 |
Q |
| |
|
||||| ||| | ||||||||| |||| ||| || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |
|
|
| T |
5351419 |
aacttcaaatttcacagaagaaacttctgaaataaaggttaaccaatttggataactatcaccaggaagcaaacaaccactactcctattgagatccata |
5351320 |
T |
|
| Q |
201 |
ttctgcaaaatttcatcgaaa |
221 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
5351319 |
ttctgcaaaatttaatcgaaa |
5351299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 5156199 - 5156398
Alignment:
| Q |
11 |
gtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaa |
110 |
Q |
| |
|
||||||||||||| || |||||||| |||| | |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| ||| |
|
|
| T |
5156199 |
gtttttaaggccactacatgttacattatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaat |
5156298 |
T |
|
| Q |
111 |
gttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
| |||||||||||||||||| |||| ||||||||||||||||||||||||| || || |||||||||||||||| |||| |||| |||||||| |||| |
|
|
| T |
5156299 |
ttcacagaagaaccttcagaattataggttaaccaatttggataactatcactggggaggaaacaaccaccactcccattgccatccatattctggaaaa |
5156398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 5372206 - 5372011
Alignment:
| Q |
11 |
gtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaa |
110 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| ||||||||||| || || ||||||| |||||||||||||||| |||| ||||||||||||||| ||| |
|
|
| T |
5372206 |
gtttttaaggccactagatgttacattatccggagttgaagtacagacattgcacataattgtcttcaagttacgcccttccacttgaggaacttcaaat |
5372107 |
T |
|
| Q |
111 |
gttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgc |
206 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
5372106 |
ttcacagaagaaccttcagaactataggttaaccaatttggataactatcattggggaggaaacaaccaccactcccgttgccatccatattctgc |
5372011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 5439094 - 5438926
Alignment:
| Q |
37 |
tatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactata |
136 |
Q |
| |
|
||||| ||||||||| |||| |||||||||||| || | |||| |||| |||| |||||||||| |||||||||||||||||||||||||||||| || | |
|
|
| T |
5439094 |
tatccggagttgaagaatagacaatgcacatcaatgacatcaaattacgcccttccacttgagggacttgaaaagttacagaagaaccttcagaattaaa |
5438995 |
T |
|
| Q |
137 |
agttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
|||||||||||||||||||||||||| || || |||| |||| |||||| ||||||||| |||||||| |
|
|
| T |
5438994 |
ggttaaccaatttggataactatcaccggggagaaaacgaccatcactcccattgacatccatattctg |
5438926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 5448717 - 5448547
Alignment:
| Q |
12 |
tttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaag |
111 |
Q |
| |
|
|||||||||||| ||||||||||| |||| | |||||||||||| |||||||||||| || | |||| | || | || |||||||||| |||| ||||| |
|
|
| T |
5448717 |
tttttaaggccactagatgttacattatctggggttgaagtatagacaatgcacatcaatgacgtcaattgacgctcttccacttgagggacttcaaaag |
5448618 |
T |
|
| Q |
112 |
ttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccacca |
182 |
Q |
| |
|
|||||||||||||||||||| || | |||||||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
5448617 |
ttacagaagaaccttcagaattaaaggttaaccaatctggataactatcaccgggaaggaaacaaccacca |
5448547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 5334297 - 5334090
Alignment:
| Q |
1 |
tcactaatacgtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgagg |
100 |
Q |
| |
|
||||||| | ||||||||||||| | ||||| ||| |||| | |||||| ||||| |||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
5334297 |
tcactaacatgtttttaaggccacttgatgt-acattatctggggttgaattatagaaaatgcacatcattgtcttcaagttacccccttccacttgagg |
5334199 |
T |
|
| Q |
101 |
aacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctata |
200 |
Q |
| |
|
||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||| | | |||||||||||||||| |||| |||| ||| |
|
|
| T |
5334198 |
aacttcaaatttcacagaagaaccttcagaattatagcttaaccaatttggataactatcactgg---ggaaacaaccaccactcccattgccatccata |
5334102 |
T |
|
| Q |
201 |
ttctgcaaaatt |
212 |
Q |
| |
|
||||| |||||| |
|
|
| T |
5334101 |
ttctggaaaatt |
5334090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 45 - 173
Target Start/End: Original strand, 5256370 - 5256498
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||| | ||||||||| |||| | |||| || |||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5256370 |
gttgaagtatagacaatgcacatcattgacatcaagttacgcccttcaacttcggggacttcaaaagttacagaagaaccttcagaactataggttaacc |
5256469 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaa |
173 |
Q |
| |
|
||||||||| ||||||||||||||||||| |
|
|
| T |
5256470 |
aatttggatgactatcaccaggaagcaaa |
5256498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 5353083 - 5353243
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataa-gttaac |
143 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||| |||| |||| |||| || ||||||||||||||||||||||||| | || || |||||| |
|
|
| T |
5353083 |
gttgacgtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcag-agtagaaggttaac |
5353181 |
T |
|
| Q |
144 |
caatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||| | ||| ||||| |||||||| |
|
|
| T |
5353182 |
caatttggataactatcaccagggaggaaacaaccaccacttccattaacatccatattctg |
5353243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 5098286 - 5098126
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||||| | | ||||||| |
|
|
| T |
5098286 |
gttgaagtatagacaatgcacatcattgttttcaagctacggccttccacttggggaacttgaaaagttaccgaagaaccttcagaatgaaaggttaacc |
5098187 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
||| |||||||| |||| |||||||||||| |||| |||| ||||| ||| |||||||| |
|
|
| T |
5098186 |
aatctggataaccatcagtgggaagcaaacaatcaccgctcccattgagatccatattctg |
5098126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 5346077 - 5345941
Alignment:
| Q |
69 |
attgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaa |
168 |
Q |
| |
|
||||||||||| | | |||| ||||||||||||||| |||||| |||||||||||||||||| | |||||||||||| ||||||||| |||||||||| |
|
|
| T |
5346077 |
attgtcttcaacattcgcccttccacttgaggaacttcaaaagtaacagaagaaccttcagaattgaaagttaaccaatctggataactgtcaccaggaa |
5345978 |
T |
|
| Q |
169 |
gcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
|||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
5345977 |
gcaaacaaccaccactcccattctcatccatattctg |
5345941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 5180960 - 5181154
Alignment:
| Q |
11 |
gtttttaaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaa |
110 |
Q |
| |
|
||||||||||||| | ||||||||| ||| |||||||| ||||| ||| | |||||||||||||||||||| ||| |||| ||| |||| |||| |
|
|
| T |
5180960 |
gtttttaaggccacttgatgttacattatgtggagttgaattatagacaacgagcatcattgtcttcaagttacgtccttccaccaaagggacttcaaaa |
5181059 |
T |
|
| Q |
111 |
gttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||||||||||||||||||| || || ||| |||||||||| ||||||||| |||||||| |
|
|
| T |
5181060 |
gttacagaagaaccttcagaattaaaggttaaccaatttggataactatcactggggaggaaataaccaccactttcattgacatccatattctg |
5181154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 5242759 - 5242895
Alignment:
| Q |
69 |
attgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaa |
168 |
Q |
| |
|
||||||||||| | | |||| |||||||||| |||| |||||| |||||||||||||||||| | |||||||||| ||||||||| |||||||||| |
|
|
| T |
5242759 |
attgtcttcaacattcgcccttccacttgagggacttcaaaagtaacagaagaaccttcagaatcgaaggttaaccaatctggataactgtcaccaggaa |
5242858 |
T |
|
| Q |
169 |
gcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
|||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
5242859 |
gcaaacaaccaccactcccattctcatccatattctg |
5242895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 2939020 - 2938888
Alignment:
| Q |
11 |
gtttttaaggccagtagatgttacaatatccagagttgaagtata--ggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaa |
108 |
Q |
| |
|
||||||||||||| ||||||||||| |||| | ||| ||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| || |
|
|
| T |
2939020 |
gtttttaaggccactagatgttacattatctggggtttaagtatatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaa |
2938921 |
T |
|
| Q |
109 |
aagttacagaagaaccttcagaactataagtta |
141 |
Q |
| |
|
| | |||||||||| ||||||| |||| |||| |
|
|
| T |
2938920 |
atttcacagaagaacattcagaattataggtta |
2938888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 270 - 407
Target Start/End: Original strand, 5181236 - 5181370
Alignment:
| Q |
270 |
ttttcctcataaggtaattaatcatattttgacgttacagagaaatatttgcttggattcataaaaccaactatcagtcctacttatgaactccatacat |
369 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| ||| | | |||||||| |
|
|
| T |
5181236 |
tttttctcataaggcaattaatcatattttgacgttacaaagaaatctttgcttggattcataaaacagactatcaatccaactgaaaagctccatacca |
5181335 |
T |
|
| Q |
370 |
accaaaataatagtgagggaaaataacgatagtaacaa |
407 |
Q |
| |
|
||||| |||| |||||||| |||| ||||||||||| |
|
|
| T |
5181336 |
accaa---aatattgagggaagataatgatagtaacaa |
5181370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 456
Target Start/End: Complemental strand, 5371970 - 5371768
Alignment:
| Q |
250 |
tcaacaattaaagatttaacttttcctcataaggtaattaatcatattttgacgttacagagaaatatttgcttggattcataaaaccaactatcagtcc |
349 |
Q |
| |
|
||||||||| ||||| ||| ||||||| ||||||||||||||||||||||| |||||| | |||||||| | | || || |||||| || |||||||| |
|
|
| T |
5371970 |
tcaacaatttaagatataa-ttttccttataaggtaattaatcatattttgttgttacaaataaatattttcattgactcgtaaaacatacaatcagtcc |
5371872 |
T |
|
| Q |
350 |
tacttatgaactccatacataccaaaataatagtgagggaaaataacgatagtaacaaattttaccgctctaaaatgcgctttttgaagcctgtaagttt |
449 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||||| |||| |||| | ||| | ||||| ||||||||| ||| ||||||| |||||||||| |
|
|
| T |
5371871 |
cacttaaaaactccataccatccaa---aatagtgagggaagataatgatactgacataggttaccaatctaaaatgtgctatttgaagactgtaagttt |
5371775 |
T |
|
| Q |
450 |
gtaacag |
456 |
Q |
| |
|
||||||| |
|
|
| T |
5371774 |
gtaacag |
5371768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 5177842 - 5177646
Alignment:
| Q |
17 |
aaggccagtagatgttacaatatccagagttgaagtataggcaatgca---catcattgtcttcaagttacaccctcccacttgaggaacttgaaaagtt |
113 |
Q |
| |
|
||||||| | ||||||| | ||||||| ||||||| |||| ||||||| |||||||||||| || | |||||| |||||||||| |||| ||| || |
|
|
| T |
5177842 |
aaggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcattgtctttaaagtgcacccttccacttgagggacttcaaacatt |
5177743 |
T |
|
| Q |
114 |
acagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
|| ||||||||||| || | | |||||||||| |||| ||||||||| ||||| |||||||||||||| || ||| |||| |||||||| |||| |
|
|
| T |
5177742 |
accgaagaaccttcgcaattgaaggttaaccaatctggacaactatcactaggaaacaaacaaccaccacacccattctcatccatattctgtaaaa |
5177646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 204
Target Start/End: Original strand, 23127530 - 23127689
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||| | ||| ||||| |||||||||| |||| |||| ||||||||||| ||| |||| ||||||||||||||||| ||| || ||||| |
|
|
| T |
23127530 |
gttgaagtattgacaacacacattattgtcttcacgttatgcccttccacttgaggagcttcaaaacttacagaagaaccttcaaaaccgaaacctaacc |
23127629 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattct |
204 |
Q |
| |
|
| | |||||||||||| ||| || ||||||||||||| | ||||||||||||||||| |
|
|
| T |
23127630 |
agtctggataactatcttcagtgagaaaacaaccaccacatccattgacatctatattct |
23127689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 5126899 - 5127017
Alignment:
| Q |
92 |
cacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattg |
191 |
Q |
| |
|
||||||||| |||| ||||||||| ||||||||||| || | | | |||||||| |||||||||||||||||||||||||| |||||||| || | || |
|
|
| T |
5126899 |
cacttgaggtacttcaaaagttaccgaagaaccttcggagttgaaggctaaccaatatggataactatcaccaggaagcaaactaccaccacaccaactg |
5126998 |
T |
|
| Q |
192 |
acatctatattctgcaaaa |
210 |
Q |
| |
|
|||| |||||||| |||| |
|
|
| T |
5126999 |
gcatccatattctgtaaaa |
5127017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 347
Target Start/End: Original strand, 5256578 - 5256686
Alignment:
| Q |
238 |
cttatcatttattcaacaattaaagatttaacttttcctcataaggtaattaatcatattttgacgttacagagaaatatttgcttggattcataaaacc |
337 |
Q |
| |
|
||||||||||||| ||||||| || || |||||| ||| |||||||| |||||||||||||| ||||||| | ||| |||| |||||||||||||||| |
|
|
| T |
5256578 |
cttatcatttattgaacaattgaatatataacttc-ccttataaggtagttaatcatattttggcgttacaaataaagattttcttggattcataaaaca |
5256676 |
T |
|
| Q |
338 |
aactatcagt |
347 |
Q |
| |
|
||||||||| |
|
|
| T |
5256677 |
gactatcagt |
5256686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 5279667 - 5279476
Alignment:
| Q |
17 |
aaggccagtagatgttacaatatccagagttgaagtataggcaatgcacatcat---tgtcttcaagttacaccctcccacttgaggaacttgaaaagtt |
113 |
Q |
| |
|
||||||| | ||||||| | ||||||| ||||||| |||| ||||||| ||||| |||||| || | |||||| |||||||||| |||| ||| || |
|
|
| T |
5279667 |
aaggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcaatgtctttaaagtgcacccttccacttgagggacttcaaacatt |
5279568 |
T |
|
| Q |
114 |
acagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctg |
205 |
Q |
| |
|
|| ||||||||||| || | | |||||||||| |||| ||||||||| |||| |||||||||||||| || ||| |||| |||||||| |
|
|
| T |
5279567 |
accgaagaaccttcgcaattgaaggttaaccaatctggacaactatcacttggaaacaaacaaccaccacacccattctcatccatattctg |
5279476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 5689167 - 5689291
Alignment:
| Q |
86 |
ccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaaccaccactc |
185 |
Q |
| |
|
|||| |||||||||| |||| ||| |||| ||||||||||| || | | |||||||||| |||| ||||||||| ||||| |||||||||||||| | |
|
|
| T |
5689167 |
cccttccacttgagggacttcaaacattaccgaagaaccttcgcaattgaaggttaaccaatctggacaactatcactaggaaacaaacaaccaccacac |
5689266 |
T |
|
| Q |
186 |
ctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
| ||| |||| |||||||| |||| |
|
|
| T |
5689267 |
ccattctcatccatattctgtaaaa |
5689291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 86; Significance: 7e-41; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 47985613 - 47985778
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| || | |||||||||| |||| ||||||||| ||||||||||||||| || | ||||||| |
|
|
| T |
47985613 |
gttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaaccttcagaattaaaggttaacc |
47985712 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||| ||| ||| | |||||||| |||| |
|
|
| T |
47985713 |
aatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaaa |
47985778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 47994900 - 47995065
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| || | |||||||||| |||| ||||||||| ||||||||||||||| || | ||||||| |
|
|
| T |
47994900 |
gttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaaccttcagaattaaaggttaacc |
47994999 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||| ||| ||| | |||||||| |||| |
|
|
| T |
47995000 |
aatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaaa |
47995065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 48004187 - 48004352
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| || | |||||||||| |||| ||||||||| ||||||||||||||| || | ||||||| |
|
|
| T |
48004187 |
gttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaaccttcagaattaaaggttaacc |
48004286 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||| ||| ||| | |||||||| |||| |
|
|
| T |
48004287 |
aatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaaa |
48004352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 48013472 - 48013637
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| || | |||||||||| |||| ||||||||| ||||||||||||||| || | ||||||| |
|
|
| T |
48013472 |
gttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaaccttcagaattaaaggttaacc |
48013571 |
T |
|
| Q |
145 |
aatttggataactatcaccaggaagcaaacaaccaccactcctattgacatctatattctgcaaaa |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||| ||| ||| | |||||||| |||| |
|
|
| T |
48013572 |
aatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaaa |
48013637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 8879604 - 8879486
Alignment:
| Q |
45 |
gttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacc |
144 |
Q |
| |
|
||||| |||||| ||||||||||||| | ||||||||| | |||| | ||||||||||||| |||||||||| ||| ||||||| |||| ||||||||| |
|
|
| T |
8879604 |
gttgatgtatagacaatgcacatcatcgacttcaagtttctcccttcaacttgaggaactttaaaagttacacaaggaccttcacaactgaaagttaacc |
8879505 |
T |
|
| Q |
145 |
aatttggataactatcacc |
163 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
8879504 |
aatttggataattatcacc |
8879486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 4319523 - 4319604
Alignment:
| Q |
46 |
ttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttc |
127 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||| ||| ||| |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
4319523 |
ttgaagaatagacaatgcacattattgtcttcaagctacgtccttccacttgagggacttcaaaaattacagaagaaccttc |
4319604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 4362626 - 4362489
Alignment:
| Q |
46 |
ttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacca |
145 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||| |||| ||| |||||||||| |||| |||| |||||||| |||||| | | || ||||||| |
|
|
| T |
4362626 |
ttgaagaatagacaatgcacattattgtcttcaagctacatccttccacttgagggacttcaaaaattacagaataacctttggcgttgaaacttaacca |
4362527 |
T |
|
| Q |
146 |
atttggataactatcaccaggaagcaaacaaccaccac |
183 |
Q |
| |
|
|||||| ||| ||||||||| |||||| ||| ||||| |
|
|
| T |
4362526 |
atttgggtaatcatcaccagggagcaaaaaactaccac |
4362489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 4336976 - 4336896
Alignment:
| Q |
46 |
ttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaacctt |
126 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||| ||| |||| ||||| |||| |||| |||||||| |||||| |
|
|
| T |
4336976 |
ttgaagaatagacaatgcacatcattgtcttcaagctacgtccttccacatgagggacttcaaaatttacagaataacctt |
4336896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 4346430 - 4346293
Alignment:
| Q |
46 |
ttgaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaacca |
145 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||| || ||| |||||||||| |||| ||| |||||||| |||||| || | ||||| |||| |
|
|
| T |
4346430 |
ttgaagaatagacaatgcacattattgtcttcaagctatgtccttccacttgagggacttcaaagattacagaataacctttggagttgaaagttgacca |
4346331 |
T |
|
| Q |
146 |
atttggataactatcaccaggaagcaaacaaccaccac |
183 |
Q |
| |
|
|||||| ||| ||||||| || |||||| ||| ||||| |
|
|
| T |
4346330 |
atttgggtaattatcaccggggagcaaaaaactaccac |
4346293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 7884381 - 7884456
Alignment:
| Q |
48 |
gaagtataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaac |
123 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||| || ||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
7884381 |
gaagaataggcaatgcacatgattgtcttcaaagaacgcccgtccacttgaggtacttcgaaagttacagaagaac |
7884456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 4122872 - 4122929
Alignment:
| Q |
53 |
ataggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaa |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| ||| |||||||||| |||| |||| |
|
|
| T |
4122872 |
atagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttcaaaa |
4122929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 22583567 - 22583644
Alignment:
| Q |
102 |
acttgaaaagttacagaagaaccttcagaactataagttaaccaatttggataactatcaccaggaagcaaacaacca |
179 |
Q |
| |
|
|||| |||||||||||||||||||| || | | ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22583567 |
actttaaaagttacagaagaaccttggcaattgaagtttaaccaatttggataattatcaccaggaagcaaacaacca |
22583644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 8104 - 8232
Alignment:
| Q |
55 |
aggcaatgcacatcattgtcttcaagttacaccctcccacttgaggaacttgaaaagttacagaagaaccttcagaactataagttaaccaatttggata |
154 |
Q |
| |
|
||||||||||||||| || ||| |||||| | || |||||||||| | | |||| ||||||||||||| ||| || | | ||||||| |||||||| |
|
|
| T |
8104 |
aggcaatgcacatcaatgactttaagttatgctcttccacttgaggggcattaaaaattacagaagaaccatcacaattgaagcttaaccagtttggata |
8203 |
T |
|
| Q |
155 |
actatcaccaggaagcaaacaaccaccac |
183 |
Q |
| |
|
||||||||| || || | ||||||||||| |
|
|
| T |
8204 |
actatcacccgggagaacacaaccaccac |
8232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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