View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9211_low_12 (Length: 257)
Name: NF9211_low_12
Description: NF9211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9211_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 44416780 - 44417008
Alignment:
| Q |
16 |
gatacaatgctttggactgaaatcaattctcacgccagtagaaaacttcagagaactaggctcgaatgacggcatagttgacacgtccatggagactaat |
115 |
Q |
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| T |
44416780 |
gatacaatgctttggactgaaatcaattctcacgccagtagaaaacttcagagaactaggctcgaatgacggcatagttgacacgtccatggagactaat |
44416879 |
T |
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| Q |
116 |
tttggaagaaggggtaaaaaggaaagcaaaagaagatcacctccaatatggaacattagaaacttatttcaaaataataattatttgacaagagcaattg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44416880 |
tttggaagaaggggtaaaaaggaaagcaaaagaagatcacctccaatatggaacattagaaacttatttcaaaataataattatttgacaagagcaattg |
44416979 |
T |
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| Q |
216 |
atagtatacaacaaatatattgcaacaaa |
244 |
Q |
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| T |
44416980 |
atagtatacaacaaatatattgcaacaaa |
44417008 |
T |
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