View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9211_low_6 (Length: 305)
Name: NF9211_low_6
Description: NF9211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9211_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 7499028 - 7499321
Alignment:
| Q |
1 |
aatatgttttgtgaaaggcatcaatgttggggccacattggaatccaatggcaacagaagtagcagtggtgttggaaggggaaggaatggtaagagtggt |
100 |
Q |
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| T |
7499028 |
aatatgttttgtgaaaggcatcaatgttggggccacattggaatccaatggcaacagaagtagcagtggtgttggaaggggaaggaatggtaagagtggt |
7499127 |
T |
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| Q |
101 |
atgtggaagcaacaatgatgacaaatgcaaaaacaagaggtttagagttcagcaaggagatgtttttgtggtgcctaggtttcatccaatggctcaaatg |
200 |
Q |
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| T |
7499128 |
atgtggaagcaacaatgatgacaaatgcaaaaacaagaggtttagagttcagcaaggagatgtttttgtggtgcctaggtttcatccaatggctcaaatg |
7499227 |
T |
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| Q |
201 |
tcatttgttaatcagacacttgtttttatgggattcagcactgctgcaaagaaaaatcatcctcagtttttggctggtaaagaatctgtgctgc |
294 |
Q |
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| T |
7499228 |
tcatttgttaatcagccacttgtttttatgggattcagcactgctgcaaagaaaaatcatcctcagtttttggctggtaaagaatctgtgctgc |
7499321 |
T |
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