View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9215_low_2 (Length: 430)
Name: NF9215_low_2
Description: NF9215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9215_low_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 17 - 430
Target Start/End: Complemental strand, 35651054 - 35650637
Alignment:
| Q |
17 |
attattactatactgcatggggggtataaaagacaaggtagagctaagggtgataggttagtttatggtgtttccatgttcttttgtctctctaagttag |
116 |
Q |
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| T |
35651054 |
attattactatactgcatggggtgtataaaagacaaggtagagctaagggtgataggttagtttatggtgtttccatgttcttttgtctctctaagttag |
35650955 |
T |
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| Q |
117 |
ttactccaaaggtgcacatgggaatgcacatgtgaggtgtccacatgtccttttcattctactaattcacaatcacatgaagattgatcaaatatttgct |
216 |
Q |
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| T |
35650954 |
ttactccaaaggtgcacatgggaatgcacatgtgaggtgtccacatgtccttttcattctactacttcacaatcacatgaagattgatcaaatatttgct |
35650855 |
T |
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| Q |
217 |
atgattcttttaannnnnnnnactgtttaaaatagttcatataggtaagttaatggcttagggaatgacaagcttgtaaaatgcaaatgtcttttgtgtg |
316 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35650854 |
atgattcttttaattttttttactgtttaaaatagttcatataggtaagttaatggcttagggaatgacaagcttgtaaaatgcaaatgtcttttgtgtg |
35650755 |
T |
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| Q |
317 |
tagactttgtgactaaaataatgttgctacaatgcgccacatttcatctataaaagacacaagcctcatttgcctata----atataacttacactcttc |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
35650754 |
tagactttgtgactaaaataatgttgctacaatgcgccacatttcatctataaaagacacaagcctcatttgcctataatatatataacttacactcttc |
35650655 |
T |
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| Q |
413 |
tcttctttaacaccaaac |
430 |
Q |
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| T |
35650654 |
tcttctttaagaccaaac |
35650637 |
T |
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