View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9219_high_9 (Length: 413)
Name: NF9219_high_9
Description: NF9219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9219_high_9 |
 |  |
|
| [»] chr5 (9 HSPs) |
 |  |
|
| [»] chr4 (2 HSPs) |
 |  |
|
| [»] chr2 (2 HSPs) |
 |  |
|
| [»] chr3 (2 HSPs) |
 |  |
|
| [»] chr6 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 56 - 413
Target Start/End: Complemental strand, 42119183 - 42118813
Alignment:
| Q |
56 |
atcatgatgagagctctgctctgcttcagtttaagtcctccttcactataatcgatagt------------tatgaatctctgaataaaacaacaacatg |
143 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | | | || ||| || |||||| ||||||| |
|
|
| T |
42119183 |
atcatgatgagagctctgctctgcttcagttcaagtcctccttcactatagaagatattacttattatatttttaaacctccgagtaaaactgcaacatg |
42119084 |
T |
 |
| Q |
144 |
gaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggctttgaacgccttaca |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42119083 |
gaaaaatgggactgattgctgctcatcatggcatggtgtcgcgtgtgtcagagtctctggtcacgtgattggtctcaaccttggcttttaacgccttact |
42118984 |
T |
 |
| Q |
244 |
ggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcgttttcattctaagt |
343 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
42118983 |
ggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccgcttctcgttttcattctaagt |
42118884 |
T |
 |
| Q |
344 |
ttggtggttttttgagtcttacacatcttgacttgtctcata-cttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
42118883 |
ttggtggttttttgagtcttacacatcttgacttgtctcatagttttctttaaaggtgaaattccaactca |
42118813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 130 - 409
Target Start/End: Complemental strand, 42125695 - 42125419
Alignment:
| Q |
130 |
aaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggct |
229 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||| ||||||||||||| ||||| ||||||| |
|
|
| T |
42125695 |
aaaacagcaacatggaaaaatgggactgattgctgctcat---ggaatggtgtcacgtgtgataccatcactcgtcacgtgattggcctcaatcttggct |
42125599 |
T |
 |
| Q |
230 |
ttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcg |
329 |
Q |
| |
|
|||| ||||| ||||||| |||||||||||| |||||||||| ||||||||||||| |||||||| |||||| | |||| ||||||| ||||| |
|
|
| T |
42125598 |
gtgaaggccttcaaggtaaactacatcctaacagtacccttttcaatcttgttcatcttcaaacactcaacctttctaacaatgatttctcttactctca |
42125499 |
T |
 |
| Q |
330 |
ttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaa |
409 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| |||||||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
42125498 |
ttttcattctaagtttggtgggtttatgagtcttgcacatcttgacttgtctcgtagtttctttaaaggtgaaattccaa |
42125419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 129 - 413
Target Start/End: Complemental strand, 42130921 - 42130640
Alignment:
| Q |
129 |
taaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggc |
228 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
42130921 |
taaaacagcaacatggaaaaatgggactgattgctgctcat---ggaatggcgtcacgtgtgacacagtctctggtcacgtgattgacctcaaccttggc |
42130825 |
T |
 |
| Q |
229 |
tttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctc |
328 |
Q |
| |
|
| |||| |||||||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||| |||||| | | |||| |||||| | ||||| |
|
|
| T |
42130824 |
tgtgaaggccttacaggtacattcaatcctaatagtaccctttttcatcttgttcatctccaaacactcaacctttcttacaatgatttctttgactctc |
42130725 |
T |
 |
| Q |
329 |
gttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
|||||||| ||||||| |||| ||| ||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||| |
|
|
| T |
42130724 |
attttcattataagttttgtggatttcagagtcttacacatcttgacttgtctgatagtaacttagaaggtgaaattccaactca |
42130640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 130 - 409
Target Start/End: Original strand, 41711694 - 41711970
Alignment:
| Q |
130 |
aaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggct |
229 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||| ||| |||||||| ||||||| ||| ||||| |||| |||| ||||||||||||| |
|
|
| T |
41711694 |
aaaacaacaacatggaaaaatgagactgattgttgctcat---ggcccggtgtcacatgtgacaccgtctatggtcgcgtggttggcctcaaccttggct |
41711790 |
T |
 |
| Q |
230 |
ttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcg |
329 |
Q |
| |
|
||| ||||| ||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||| | | |||| ||||||| ||| | |
|
|
| T |
41711791 |
gtgatggccttcaaggtatattccatcctaataatactcttttccatcttgttcatctccaaacactcaacctttcttacaatgatttctcttactccca |
41711890 |
T |
 |
| Q |
330 |
ttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaa |
409 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| ||||||||||| ||||| ||| || |||| ||||||||||||||| |
|
|
| T |
41711891 |
ttttcattctaagtttggtcggtttttgagtcttgcacatcttgacatgtcttatagttactttgaaggtgaaattccaa |
41711970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 51 - 387
Target Start/End: Original strand, 34238683 - 34239019
Alignment:
| Q |
51 |
atgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcactataatcgatagttatg---aatctctgaataaaacaacaacatggaaa |
147 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| |||||||||||||||||| | || || |||||| | |||||| ||||||||||| |
|
|
| T |
34238683 |
atgtcatcatgatgagagctttgctttgcttcagttcaagtcctccttcactatagatactccttgtgttaaatctcctatgaaaacagcaacatggaaa |
34238782 |
T |
 |
| Q |
148 |
aatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggctttgaacgccttacaggta |
247 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||| || |||||||| | |||| || || ||||| |
|
|
| T |
34238783 |
aatgggactgattgctgctcat---ggcatggtgtcacgtgtgacaccgtatctggtcacgtcattggccttaaccttggttgtgaaggctttcaaggta |
34238879 |
T |
 |
| Q |
248 |
aattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcgttttcattctaagtttgg |
347 |
Q |
| |
|
| | |||||||| | |||||||||| || ||||||||||||||||||| |||||| | |||| ||||| || || |||| ||||||||||||| |
|
|
| T |
34238880 |
tactccatcctaatagtacccttttcaatattgttcatctccaaacactcaacctttctaacaatggtttctatggttcctattttgattctaagtttgg |
34238979 |
T |
 |
| Q |
348 |
tggttttttgagtcttacacatcttgacttgtctcatact |
387 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
34238980 |
caggtttacgagtcttacacatcttgacttgtctaatact |
34239019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 381
Target Start/End: Original strand, 34230628 - 34230970
Alignment:
| Q |
51 |
atgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcactataatcgatagttatg---aatctctgaataaaacaacaacatggaaa |
147 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| |||||||||||||||||| | || || |||||| | |||||| ||||||||||| |
|
|
| T |
34230628 |
atgtcatcatgatgagagctttgctttgcttcagttcaagtcctccttcactatagatactccttgtgttaaatctcctatgaaaacagcaacatggaaa |
34230727 |
T |
 |
| Q |
148 |
aatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggctttgaacgccttacaggta |
247 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||| || |||||||||| |||| || || ||||| |
|
|
| T |
34230728 |
aatgggactgattgctgctcat---ggcatggtgtcacgtgtgacaccgtatctggtcacgtcattggccttaaccttggctgtgaaggctttcaaggta |
34230824 |
T |
 |
| Q |
248 |
aattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctcc------------ggctctcgttttca |
335 |
Q |
| |
|
| | |||||||| | ||||||||||||||||| ||| || |||| || |||||| | |||| ||||||| ||||| | |||||| |
|
|
| T |
34230825 |
tactccatcctaatagtacccttttccatcttgctcaccttcaaatgctcaacctttcgaacaattatttctctaacgatttctctggctcccattttca |
34230924 |
T |
 |
| Q |
336 |
ttctaagtttggtggttttttgagtcttacacatcttgacttgtct |
381 |
Q |
| |
|
|||||||||||| || ||| |||||||||||||||| ||||||||| |
|
|
| T |
34230925 |
ttctaagtttggcgggtttatgagtcttacacatctcgacttgtct |
34230970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 169 - 381
Target Start/End: Original strand, 41569960 - 41570172
Alignment:
| Q |
169 |
tcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggctttgaacgccttacaggtaaattacatcctaacaataccc |
268 |
Q |
| |
|
|||||||||||||||||||| ||| ||| |||||| ||||||||||||| ||||||||| |||| ||||| ||||||| | |||||||||| || | |
|
|
| T |
41569960 |
tcatggcatggtgtcacgtgcgacgctgtctctggtcgcgtgattggtctcgaccttggctgtgaatgccttcaaggtaaaatttatcctaacaacactc |
41570059 |
T |
 |
| Q |
269 |
ttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcgttttcattctaagtttggtggttttttgagtcttacaca |
368 |
Q |
| |
|
|||| ||||||| |||||||||| |||| |||||| | |||| |||||| | ||| ||| |||||| |||||||||| ||| |||||||||||| |
|
|
| T |
41570060 |
tttttcatcttgctcatctccaatcactcaacctttctcacaatgatttcttcaactccaatttgcattctcagtttggtggatttaagagtcttacaca |
41570159 |
T |
 |
| Q |
369 |
tcttgacttgtct |
381 |
Q |
| |
|
||||||||||||| |
|
|
| T |
41570160 |
tcttgacttgtct |
41570172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 42125788 - 42125745
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttcagtt |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42125788 |
aatttttcatgtcatcatgatgagagctctgctttgcttcagtt |
42125745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 42131010 - 42130948
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcactata |
105 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||| |||||||||| ||||| ||||||| |||| |
|
|
| T |
42131010 |
aatttttcatgccatcataatgacagctctgctttgcttcagttcaagtcatccttcattata |
42130948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 136; Significance: 8e-71; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 132 - 413
Target Start/End: Complemental strand, 11120467 - 11120189
Alignment:
| Q |
132 |
aacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggcttt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| || |||||| ||||||||| ||||| ||||||| | |
|
|
| T |
11120467 |
aacaacaacatggaaaaatgggactgattgctgctcat---ggaatggtgtcacgtgcgacaccatctctggtcgcgtgattggcctcaatcttggctgt |
11120371 |
T |
 |
| Q |
232 |
gaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcgtt |
331 |
Q |
| |
|
||| | ||| ||| | ||||||||| || | ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |
|
|
| T |
11120370 |
gaaggtcttcaaggcatattacatccgaatagtacccttttccatcttgttcatctccaaacactcaaccttgtatacaataatttctccggctctcgtt |
11120271 |
T |
 |
| Q |
332 |
ttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||| |||||||| ||| | | || | ||||||||||||||||| |
|
|
| T |
11120270 |
ttcattctaagtttggtgggtttcagagtcttacacatctttacttgtcttatagtaacatttatggtgaaattccaactca |
11120189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 11120574 - 11120516
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcac |
101 |
Q |
| |
|
||||||||||| ||||| |||||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
11120574 |
aatttttcatgccatcacgatgagagctttgctttgcttcagttcgagtcctccttcac |
11120516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 123 - 413
Target Start/End: Complemental strand, 12250523 - 12250236
Alignment:
| Q |
123 |
tctgaataaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaac |
222 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| | || |||||| |||||||| ||| || |
|
|
| T |
12250523 |
tctgaataaaacagcaacatggcaaaatgggactgattgctgctcat---ggcatggtgtcacatgtgacacaatctatggtcatgtgattggcctcgac |
12250427 |
T |
 |
| Q |
223 |
cttggctttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccg |
322 |
Q |
| |
|
|||||| |||| ||||| |||| |||||| ||||| | |||||||||| |||||| ||||||||||||||| |||||| | |||||| ||||||| |
|
|
| T |
12250426 |
cttggcgatgaaggccttgatggtatattacaacctaatagtacccttttcgatcttgctcatctccaaacactcaacctttcttccaatgatttctcaa |
12250327 |
T |
 |
| Q |
323 |
gctctcgttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
||| | ||||||||||||||||||||| || || | |||||||||||||||||||||| ||| || ||||||||||||| |||||||||| |
|
|
| T |
12250326 |
actcccattttcattctaagtttggtggattctttaatcttacacatcttgacttgtctaatagtttctttaaaggtgaagttccaactca |
12250236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 12250561 - 12250522
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttc |
82 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12250561 |
aatttttcatgtcatcatgacgagagctctgctctgcttc |
12250522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 130 - 413
Target Start/End: Complemental strand, 8525150 - 8524870
Alignment:
| Q |
130 |
aaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttggct |
229 |
Q |
| |
|
|||||| ||||||||||||||| || |||||||||||||| || |||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
8525150 |
aaaacagcaacatggaaaaatgagattgattgctgctcat---gggatggtgtcacgtgtgacaccatcagtggtcacgtgattggcctcaaccttggct |
8525054 |
T |
 |
| Q |
230 |
ttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctctcg |
329 |
Q |
| |
|
|||| | ||| ||| | | | ||||||||| ||||||||||||||||| | || | |||| ||| |||||||| |||| ||||||| |||||| |
|
|
| T |
8525053 |
gtgaaggtcttcaaggcatactcaatcctaacagtacccttttccatcttgcttatattcaaaaactcaaccttgctaacaatgatttctctggctctta |
8524954 |
T |
 |
| Q |
330 |
ttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
8524953 |
ttttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcatagttaccttaaaggtgaaattccaactca |
8524870 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 8525261 - 8525198
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcactataa |
106 |
Q |
| |
|
|||||||| || |||||| |||||||||||||| ||||||| || ||||| ||||||||||||| |
|
|
| T |
8525261 |
aatttttcttgccatcattatgagagctctgctttgcttcatttcaagtcatccttcactataa |
8525198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 413
Target Start/End: Original strand, 25520828 - 25521210
Alignment:
| Q |
43 |
aatttttcatgtcatcatgatgagagctctgctctgcttcagtttaagtcctccttcactataa--tc-ga------------tagttatgaatctctga |
127 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| || || | || |||||||||| |
|
|
| T |
25520828 |
aatttttcatgccatcgtgatgagagctctgctctgcttcagtttaaatcctccttcactataaattctgaatcttcttatccttgtgatgaatctcttc |
25520927 |
T |
 |
| Q |
128 |
ataaaacaacaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcacgtgtgacagagtcactggtcacgtgattggtctcaaccttgg |
227 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || |||| ||||| ||||||||| ||||||||||| |
|
|
| T |
25520928 |
tgaaaacagcaacatggaaatatgggactgattgctgctcat---ggcatggtgtcacatgcgacaccacttttggtcgcgtgattggcctcaaccttgg |
25521024 |
T |
 |
| Q |
228 |
ctttgaacgccttacaggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccggctct |
327 |
Q |
| |
|
|| |||| |||| ||||| ||| |||||||| | ||| ||||||||||||| |||| | |||| ||| |||||| | | |||| ||||| | ||||| |
|
|
| T |
25521025 |
ctgtgaaggcctccaaggtatattccatcctaatagtactcttttccatcttgctcatattcaaaaactcaacctttcttacaatgatttcactggctcc |
25521124 |
T |
 |
| Q |
328 |
cgttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatacttcctttaaaggtgaaattccaactca |
413 |
Q |
| |
|
| ||||||| ||||||||||||| ||| |||||||||||||||| |||||||| || || |||||||||| ||||||||||||| |
|
|
| T |
25521125 |
cattttcatgctaagtttggtgggtttcagagtcttacacatctttacttgtctggtagtttctttaaaggtaaaattccaactca |
25521210 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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