View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9220_high_16 (Length: 442)

Name: NF9220_high_16
Description: NF9220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9220_high_16
NF9220_high_16
[»] chr8 (65 HSPs)
chr8 (169-424)||(7289742-7289997)
chr8 (169-424)||(25328095-25328349)
chr8 (261-424)||(6311311-6311474)
chr8 (194-424)||(39784665-39784893)
chr8 (261-424)||(36979391-36979555)
chr8 (261-424)||(30655660-30655824)
chr8 (261-424)||(33037726-33037889)
chr8 (207-424)||(35745405-35745624)
chr8 (261-424)||(18853086-18853251)
chr8 (261-424)||(18870480-18870645)
chr8 (261-424)||(4759994-4760158)
chr8 (261-424)||(10689061-10689226)
chr8 (16-120)||(6311659-6311763)
chr8 (16-120)||(10688771-10688875)
chr8 (207-424)||(10684116-10684335)
chr8 (15-120)||(7289599-7289704)
chr8 (15-120)||(25327835-25327940)
chr8 (261-424)||(1261874-1262037)
chr8 (169-256)||(6311534-6311621)
chr8 (169-256)||(18852941-18853028)
chr8 (261-416)||(31071149-31071304)
chr8 (169-256)||(30655882-30655969)
chr8 (15-120)||(39784496-39784601)
chr8 (172-256)||(18870338-18870422)
chr8 (169-256)||(10688914-10689001)
chr8 (169-270)||(25327969-25328070)
chr8 (169-256)||(33037582-33037669)
chr8 (15-120)||(18852798-18852902)
chr8 (355-424)||(26287915-26287985)
chr8 (355-424)||(26301172-26301242)
chr8 (355-424)||(26313166-26313236)
chr8 (15-119)||(30656008-30656111)
chr8 (342-416)||(4456050-4456125)
chr8 (170-256)||(4759849-4759936)
chr8 (44-120)||(4759735-4759809)
chr8 (15-120)||(35745702-35745807)
chr8 (169-256)||(1261731-1261818)
chr8 (169-256)||(36979613-36979699)
chr8 (16-120)||(18870193-18870296)
chr8 (352-416)||(26403240-26403305)
chr8 (325-416)||(19175737-19175829)
chr8 (342-416)||(7412363-7412438)
chr8 (342-416)||(6127243-6127319)
chr8 (15-120)||(10683910-10684015)
chr8 (342-416)||(23799576-23799652)
chr8 (355-416)||(4696609-4696671)
chr8 (374-416)||(9765852-9765894)
chr8 (67-120)||(33037490-33037543)
chr8 (342-416)||(5702482-5702558)
chr8 (342-416)||(19752394-19752469)
chr8 (198-256)||(31071035-31071093)
chr8 (196-256)||(26288123-26288183)
chr8 (196-256)||(26301380-26301440)
chr8 (196-256)||(26313374-26313434)
chr8 (44-103)||(36979756-36979813)
chr8 (45-83)||(2627426-2627464)
chr8 (48-120)||(3439292-3439361)
chr8 (196-256)||(5702288-5702346)
chr8 (196-237)||(7412588-7412629)
chr8 (374-407)||(18810982-18811015)
chr8 (45-120)||(1261619-1261692)
chr8 (47-83)||(1746664-1746700)
chr8 (342-416)||(9054836-9054912)
chr8 (169-256)||(19752175-19752260)
chr8 (47-83)||(34256950-34256986)
[»] chr6 (48 HSPs)
chr6 (169-424)||(11856988-11857243)
chr6 (169-424)||(22010513-22010768)
chr6 (169-424)||(14737393-14737647)
chr6 (169-424)||(14742253-14742507)
chr6 (188-424)||(28184519-28184757)
chr6 (169-424)||(28155387-28155640)
chr6 (194-424)||(6438515-6438743)
chr6 (207-424)||(6005431-6005650)
chr6 (207-424)||(16838758-16838977)
chr6 (207-424)||(33330297-33330516)
chr6 (15-120)||(11857292-11857396)
chr6 (261-424)||(5674688-5674853)
chr6 (207-424)||(33335794-33336013)
chr6 (15-120)||(14737237-14737342)
chr6 (15-120)||(22010360-22010465)
chr6 (15-120)||(14742097-14742202)
chr6 (169-256)||(5674544-5674631)
chr6 (15-120)||(28155242-28155347)
chr6 (15-120)||(6438807-6438912)
chr6 (15-120)||(16839054-16839159)
chr6 (15-120)||(6005730-6005835)
chr6 (15-120)||(33330104-33330209)
chr6 (342-416)||(5757478-5757553)
chr6 (15-120)||(5343788-5343893)
chr6 (15-120)||(33335601-33335706)
chr6 (342-416)||(5572240-5572316)
chr6 (353-416)||(10077176-10077240)
chr6 (342-416)||(21356058-21356133)
chr6 (342-424)||(21801343-21801428)
chr6 (355-415)||(22709041-22709102)
chr6 (342-416)||(18232867-18232943)
chr6 (67-118)||(5266418-5266469)
chr6 (353-424)||(4629967-4630040)
chr6 (342-424)||(31086472-31086557)
chr6 (342-416)||(31979535-31979611)
chr6 (342-415)||(22963723-22963797)
chr6 (342-415)||(23824596-23824670)
chr6 (48-110)||(16554659-16554720)
chr6 (48-110)||(16631215-16631276)
chr6 (48-110)||(16652902-16652963)
chr6 (45-82)||(411793-411830)
chr6 (261-309)||(22709137-22709185)
chr6 (45-83)||(3073197-3073235)
chr6 (48-110)||(16578835-16578896)
chr6 (48-110)||(16616484-16616545)
chr6 (169-258)||(22709239-22709326)
chr6 (374-416)||(31936609-31936651)
chr6 (355-414)||(5017482-5017542)
[»] chr5 (69 HSPs)
chr5 (169-424)||(1456978-1457233)
chr5 (169-424)||(43592293-43592548)
chr5 (169-424)||(43598738-43598993)
chr5 (169-424)||(43604230-43604485)
chr5 (169-424)||(43609722-43609977)
chr5 (169-424)||(27449828-27450083)
chr5 (169-424)||(27444984-27445239)
chr5 (169-424)||(15044700-15044955)
chr5 (261-424)||(30631420-30631584)
chr5 (207-424)||(28807429-28807643)
chr5 (264-424)||(31180228-31180388)
chr5 (207-424)||(37556478-37556693)
chr5 (207-424)||(37561300-37561515)
chr5 (207-424)||(2785389-2785608)
chr5 (207-424)||(33791330-33791549)
chr5 (261-424)||(38192187-38192350)
chr5 (261-424)||(38219412-38219575)
chr5 (261-424)||(24135862-24136025)
chr5 (207-424)||(31396843-31397064)
chr5 (169-256)||(30631642-30631729)
chr5 (15-120)||(1456809-1456914)
chr5 (15-120)||(15045004-15045109)
chr5 (261-421)||(35387679-35387839)
chr5 (169-256)||(31180449-31180536)
chr5 (207-424)||(31401700-31401921)
chr5 (304-424)||(33768193-33768314)
chr5 (15-120)||(31180573-31180678)
chr5 (15-120)||(27445291-27445395)
chr5 (15-120)||(27450134-27450238)
chr5 (15-119)||(43599043-43599146)
chr5 (15-119)||(43604535-43604638)
chr5 (15-119)||(43610027-43610130)
chr5 (169-256)||(24136082-24136169)
chr5 (15-120)||(43592597-43592701)
chr5 (15-120)||(28807247-28807352)
chr5 (15-120)||(37561118-37561223)
chr5 (15-120)||(33768495-33768600)
chr5 (15-120)||(33791627-33791732)
chr5 (342-416)||(9353332-9353407)
chr5 (342-416)||(36932350-36932425)
chr5 (15-120)||(2785686-2785791)
chr5 (272-416)||(15464554-15464697)
chr5 (39-120)||(37556320-37556401)
chr5 (342-416)||(10281773-10281849)
chr5 (169-256)||(35387895-35387982)
chr5 (342-416)||(3880321-3880397)
chr5 (342-416)||(11916971-11917047)
chr5 (15-120)||(31396661-31396766)
chr5 (15-120)||(31401518-31401623)
chr5 (44-120)||(29751468-29751543)
chr5 (342-412)||(12084175-12084246)
chr5 (342-416)||(14520252-14520327)
chr5 (342-416)||(28832281-28832356)
chr5 (169-256)||(38219631-38219718)
chr5 (352-416)||(17003970-17004035)
chr5 (48-120)||(10593048-10593118)
chr5 (342-416)||(19588768-19588844)
chr5 (45-83)||(9789663-9789701)
chr5 (45-83)||(18442087-18442125)
chr5 (45-82)||(29720073-29720110)
chr5 (45-82)||(29722260-29722297)
chr5 (342-414)||(42127410-42127483)
chr5 (374-416)||(4410241-4410283)
chr5 (43-81)||(25077811-25077849)
chr5 (43-81)||(25135780-25135818)
chr5 (44-120)||(24136208-24136282)
chr5 (45-82)||(30631804-30631841)
chr5 (169-237)||(24553308-24553376)
chr5 (47-83)||(32636510-32636546)
[»] chr3 (83 HSPs)
chr3 (169-424)||(22173011-22173266)
chr3 (169-424)||(18656449-18656702)
chr3 (261-424)||(28503783-28503947)
chr3 (261-424)||(7167258-7167422)
chr3 (261-394)||(28501616-28501750)
chr3 (207-424)||(2676939-2677158)
chr3 (261-424)||(8738982-8739146)
chr3 (261-424)||(9091220-9091384)
chr3 (207-424)||(2672783-2673002)
chr3 (261-424)||(40372715-40372878)
chr3 (261-424)||(8477376-8477542)
chr3 (261-424)||(2671505-2671669)
chr3 (207-424)||(8512231-8512450)
chr3 (207-424)||(8517111-8517330)
chr3 (207-424)||(24968121-24968340)
chr3 (15-120)||(28503490-28503595)
chr3 (261-424)||(26928510-26928674)
chr3 (261-416)||(32143343-32143498)
chr3 (15-120)||(28501323-28501428)
chr3 (169-256)||(28503637-28503725)
chr3 (169-256)||(8738837-8738924)
chr3 (169-256)||(7167480-7167568)
chr3 (169-256)||(2671360-2671447)
chr3 (169-256)||(40372570-40372657)
chr3 (261-424)||(1305962-1306125)
chr3 (261-416)||(27452980-27453135)
chr3 (169-256)||(28501470-28501558)
chr3 (169-256)||(8477600-8477687)
chr3 (169-256)||(9091075-9091162)
chr3 (46-120)||(22172884-22172957)
chr3 (15-120)||(7167607-7167711)
chr3 (319-424)||(32475499-32475603)
chr3 (319-424)||(32480357-32480461)
chr3 (15-120)||(24968428-24968533)
chr3 (15-120)||(2672590-2672695)
chr3 (15-120)||(2676746-2676851)
chr3 (15-120)||(18656752-18656857)
chr3 (15-83)||(22172833-22172900)
chr3 (342-416)||(8370476-8370551)
chr3 (342-416)||(16264372-16264447)
chr3 (15-120)||(27352252-27352356)
chr3 (342-416)||(27974942-27975017)
chr3 (65-120)||(40372476-40372531)
chr3 (67-120)||(2671268-2671321)
chr3 (342-416)||(1736294-1736370)
chr3 (261-416)||(6794624-6794778)
chr3 (342-416)||(18552872-18552948)
chr3 (342-416)||(36029115-36029191)
chr3 (342-416)||(48438236-48438312)
chr3 (65-120)||(8738743-8738798)
chr3 (65-120)||(9090981-9091036)
chr3 (342-416)||(21711245-21711320)
chr3 (355-416)||(27986449-27986511)
chr3 (355-416)||(33386669-33386731)
chr3 (342-416)||(30709779-30709855)
chr3 (15-120)||(8512551-8512656)
chr3 (15-120)||(8517431-8517536)
chr3 (15-120)||(32475795-32475900)
chr3 (342-416)||(3715991-3716067)
chr3 (342-416)||(25795803-25795879)
chr3 (342-416)||(40592771-40592847)
chr3 (342-415)||(26299011-26299086)
chr3 (15-120)||(32480653-32480758)
chr3 (342-416)||(40844674-40844749)
chr3 (342-416)||(37466313-37466388)
chr3 (45-83)||(800793-800831)
chr3 (198-256)||(1306181-1306239)
chr3 (355-416)||(1417493-1417555)
chr3 (355-416)||(39039995-39040057)
chr3 (371-412)||(4386947-4386988)
chr3 (48-120)||(6716290-6716359)
chr3 (342-416)||(47923895-47923971)
chr3 (342-416)||(3323680-3323755)
chr3 (389-424)||(10207948-10207983)
chr3 (43-81)||(25637118-25637156)
chr3 (48-120)||(6718474-6718543)
chr3 (370-407)||(53894082-53894119)
chr3 (47-83)||(3393293-3393329)
chr3 (196-255)||(4386774-4386831)
chr3 (47-83)||(5258590-5258626)
chr3 (44-103)||(8477744-8477801)
chr3 (342-416)||(24695153-24695229)
chr3 (169-237)||(27986226-27986294)
[»] chr7 (62 HSPs)
chr7 (169-424)||(12396925-12397180)
chr7 (184-424)||(12406345-12406585)
chr7 (169-424)||(24024143-24024397)
chr7 (169-424)||(31109399-31109654)
chr7 (207-424)||(19992327-19992544)
chr7 (261-424)||(20357466-20357630)
chr7 (207-424)||(21812092-21812309)
chr7 (261-424)||(2057979-2058144)
chr7 (15-124)||(12397225-12397334)
chr7 (261-424)||(21639822-21639985)
chr7 (261-424)||(1533362-1533527)
chr7 (15-120)||(4873445-4873550)
chr7 (261-424)||(18408777-18408940)
chr7 (15-110)||(12406591-12406686)
chr7 (207-424)||(24266054-24266273)
chr7 (261-424)||(21646020-21646183)
chr7 (169-256)||(4873310-4873397)
chr7 (15-120)||(31109242-31109347)
chr7 (348-424)||(4866744-4866820)
chr7 (261-424)||(18413654-18413816)
chr7 (169-256)||(20357321-20357408)
chr7 (207-424)||(24261175-24261394)
chr7 (169-256)||(1533218-1533305)
chr7 (169-256)||(2058204-2058291)
chr7 (319-424)||(16880087-16880192)
chr7 (319-424)||(16884943-16885048)
chr7 (15-120)||(24023990-24024093)
chr7 (44-120)||(2058330-2058404)
chr7 (15-120)||(16880384-16880489)
chr7 (15-120)||(16885239-16885344)
chr7 (67-120)||(20357231-20357284)
chr7 (15-120)||(21811910-21812015)
chr7 (353-416)||(21983306-21983370)
chr7 (342-416)||(29159825-29159901)
chr7 (342-415)||(44848684-44848758)
chr7 (342-416)||(2647695-2647771)
chr7 (342-416)||(46516309-46516385)
chr7 (342-416)||(49091683-49091759)
chr7 (169-256)||(21640041-21640128)
chr7 (45-118)||(1533106-1533177)
chr7 (342-414)||(33332449-33332523)
chr7 (15-120)||(24265848-24265953)
chr7 (342-416)||(55970-56045)
chr7 (196-256)||(21646239-21646299)
chr7 (342-416)||(2580412-2580487)
chr7 (342-416)||(9190008-9190083)
chr7 (342-416)||(20284111-20284186)
chr7 (354-415)||(35960839-35960901)
chr7 (179-256)||(18408995-18409072)
chr7 (67-120)||(21640167-21640220)
chr7 (15-120)||(24260992-24261097)
chr7 (44-120)||(24789628-24789702)
chr7 (169-256)||(18413871-18413958)
chr7 (374-416)||(28617258-28617300)
chr7 (44-120)||(1562312-1562386)
chr7 (342-416)||(4796666-4796742)
chr7 (354-415)||(2479360-2479421)
chr7 (355-416)||(9185178-9185240)
chr7 (45-83)||(25767400-25767438)
chr7 (45-83)||(43504575-43504613)
chr7 (47-83)||(4178461-4178497)
chr7 (358-416)||(47263700-47263757)
[»] chr4 (53 HSPs)
chr4 (169-424)||(51520471-51520726)
chr4 (169-424)||(9224223-9224478)
chr4 (169-424)||(9229010-9229265)
chr4 (194-424)||(45347658-45347888)
chr4 (169-424)||(3814038-3814291)
chr4 (194-424)||(45357138-45357367)
chr4 (169-424)||(5732679-5732932)
chr4 (261-424)||(24741954-24742118)
chr4 (207-424)||(18855741-18855956)
chr4 (306-424)||(56146664-56146782)
chr4 (261-424)||(29760655-29760820)
chr4 (15-120)||(9228857-9228962)
chr4 (15-120)||(56141683-56141788)
chr4 (169-256)||(18712582-18712669)
chr4 (15-116)||(9224070-9224171)
chr4 (15-120)||(18712426-18712531)
chr4 (15-119)||(5732971-5733075)
chr4 (169-256)||(24742176-24742263)
chr4 (15-120)||(18856033-18856138)
chr4 (15-120)||(45347488-45347593)
chr4 (15-120)||(51520775-51520879)
chr4 (169-256)||(29760876-29760964)
chr4 (15-120)||(3814330-3814435)
chr4 (15-120)||(45356969-45357074)
chr4 (67-120)||(29761002-29761055)
chr4 (261-416)||(31985555-31985708)
chr4 (65-120)||(24742302-24742357)
chr4 (342-416)||(36315229-36315304)
chr4 (342-416)||(36329438-36329513)
chr4 (355-424)||(28468542-28468612)
chr4 (342-416)||(10047401-10047477)
chr4 (342-416)||(39246016-39246092)
chr4 (342-415)||(16623292-16623367)
chr4 (353-416)||(5143281-5143345)
chr4 (342-416)||(5396671-5396746)
chr4 (355-416)||(5269204-5269266)
chr4 (352-416)||(24333831-24333896)
chr4 (352-416)||(38152449-38152514)
chr4 (342-416)||(3796518-3796594)
chr4 (342-416)||(16630679-16630755)
chr4 (169-256)||(28468315-28468402)
chr4 (352-416)||(6743425-6743490)
chr4 (353-416)||(5147699-5147763)
chr4 (342-416)||(3777571-3777646)
chr4 (45-83)||(31495756-31495794)
chr4 (48-120)||(8393187-8393256)
chr4 (48-120)||(8395396-8395465)
chr4 (261-309)||(28468458-28468506)
chr4 (342-416)||(39774304-39774380)
chr4 (43-81)||(7122372-7122410)
chr4 (43-81)||(7124594-7124632)
chr4 (45-83)||(13992733-13992771)
chr4 (47-83)||(5370521-5370557)
[»] scaffold0135 (2 HSPs)
scaffold0135 (169-424)||(34878-35133)
scaffold0135 (15-116)||(34725-34826)
[»] chr1 (51 HSPs)
chr1 (169-420)||(41398254-41398505)
chr1 (169-420)||(41390599-41390850)
chr1 (194-424)||(25444931-25445160)
chr1 (194-424)||(39445514-39445742)
chr1 (194-424)||(44023716-44023944)
chr1 (261-424)||(24787283-24787447)
chr1 (194-424)||(1054854-1055082)
chr1 (261-424)||(24202689-24202852)
chr1 (207-424)||(43988314-43988535)
chr1 (261-424)||(19358763-19358926)
chr1 (15-120)||(41390910-41391015)
chr1 (15-120)||(41398565-41398670)
chr1 (261-424)||(19361352-19361515)
chr1 (261-424)||(19379992-19380155)
chr1 (169-256)||(24787138-24787225)
chr1 (15-120)||(25444763-25444868)
chr1 (15-120)||(39445806-39445911)
chr1 (15-120)||(44023548-44023653)
chr1 (194-332)||(25439738-25439875)
chr1 (15-120)||(1054685-1054790)
chr1 (15-120)||(25439570-25439675)
chr1 (15-120)||(24786996-24787100)
chr1 (15-119)||(24793818-24793921)
chr1 (169-256)||(24202546-24202633)
chr1 (342-416)||(26644897-26644972)
chr1 (352-416)||(47703946-47704011)
chr1 (342-416)||(16124515-16124591)
chr1 (342-416)||(19072950-19073026)
chr1 (342-416)||(19120840-19120916)
chr1 (342-416)||(27104371-27104447)
chr1 (342-416)||(3281730-3281805)
chr1 (352-416)||(29651833-29651898)
chr1 (15-120)||(43988120-43988225)
chr1 (169-256)||(19366085-19366172)
chr1 (342-415)||(13604623-13604697)
chr1 (342-407)||(21536569-21536635)
chr1 (352-416)||(775694-775759)
chr1 (352-416)||(9476283-9476348)
chr1 (352-416)||(13598420-13598485)
chr1 (345-416)||(37069792-37069864)
chr1 (342-416)||(32889461-32889536)
chr1 (342-416)||(47098824-47098899)
chr1 (48-120)||(9036208-9036277)
chr1 (45-82)||(20622676-20622713)
chr1 (45-82)||(21053647-21053684)
chr1 (261-309)||(19366228-19366276)
chr1 (44-120)||(20622544-20622619)
chr1 (45-83)||(9986893-9986931)
chr1 (179-256)||(19361220-19361296)
chr1 (45-82)||(40282066-40282103)
chr1 (47-83)||(20762358-20762394)
[»] chr2 (54 HSPs)
chr2 (169-424)||(39811804-39812059)
chr2 (194-422)||(32246804-32247031)
chr2 (292-424)||(44312563-44312695)
chr2 (261-424)||(11098846-11099010)
chr2 (261-424)||(14291502-14291666)
chr2 (207-424)||(19344435-19344655)
chr2 (207-424)||(19349293-19349513)
chr2 (261-424)||(9296320-9296484)
chr2 (261-424)||(3491764-3491927)
chr2 (261-424)||(25398509-25398672)
chr2 (261-424)||(25403647-25403810)
chr2 (15-120)||(39811648-39811753)
chr2 (15-124)||(32247093-32247202)
chr2 (169-256)||(11098701-11098788)
chr2 (261-407)||(25407653-25407799)
chr2 (169-256)||(9296176-9296263)
chr2 (169-256)||(14291724-14291811)
chr2 (44-120)||(14291850-14291924)
chr2 (44-120)||(11098588-11098662)
chr2 (342-416)||(13569350-13569426)
chr2 (352-424)||(8040073-8040147)
chr2 (15-120)||(19344733-19344838)
chr2 (15-120)||(19349591-19349696)
chr2 (342-416)||(10445443-10445519)
chr2 (342-416)||(34388880-34388956)
chr2 (342-416)||(28259177-28259252)
chr2 (355-424)||(40738857-40738926)
chr2 (342-424)||(21629957-21630041)
chr2 (342-416)||(20522242-20522318)
chr2 (342-416)||(34682333-34682409)
chr2 (342-414)||(17865227-17865301)
chr2 (342-416)||(8390149-8390225)
chr2 (342-416)||(10707251-10707327)
chr2 (342-416)||(14699007-14699082)
chr2 (196-256)||(25409862-25409922)
chr2 (352-415)||(31056067-31056131)
chr2 (15-120)||(9296033-9296137)
chr2 (342-416)||(42039669-42039744)
chr2 (353-416)||(33118158-33118222)
chr2 (342-416)||(39482953-39483029)
chr2 (342-416)||(23078470-23078545)
chr2 (45-83)||(6266382-6266420)
chr2 (352-416)||(16940219-16940284)
chr2 (352-416)||(17010884-17010949)
chr2 (196-256)||(39483164-39483222)
chr2 (196-256)||(3491983-3492043)
chr2 (342-416)||(33528620-33528696)
chr2 (354-416)||(27149306-27149369)
chr2 (354-416)||(36757774-36757837)
chr2 (43-81)||(12647824-12647862)
chr2 (261-307)||(40738963-40739009)
chr2 (342-416)||(2869692-2869768)
chr2 (196-236)||(20522471-20522511)
chr2 (169-237)||(40739082-40739150)
[»] scaffold0355 (3 HSPs)
scaffold0355 (223-424)||(9514-9713)
scaffold0355 (169-351)||(3664-3845)
scaffold0355 (15-120)||(3508-3613)
[»] scaffold0464 (2 HSPs)
scaffold0464 (194-424)||(377-605)
scaffold0464 (15-120)||(669-774)
[»] scaffold0188 (4 HSPs)
scaffold0188 (261-424)||(17872-18035)
scaffold0188 (261-424)||(23965-24128)
scaffold0188 (169-256)||(17729-17816)
scaffold0188 (169-256)||(23822-23909)
[»] scaffold0197 (4 HSPs)
scaffold0197 (207-424)||(14161-14380)
scaffold0197 (207-424)||(19017-19236)
scaffold0197 (15-120)||(13955-14060)
scaffold0197 (15-120)||(18835-18940)
[»] scaffold0259 (2 HSPs)
scaffold0259 (207-424)||(2103-2322)
scaffold0259 (15-120)||(1910-2015)
[»] scaffold0028 (2 HSPs)
scaffold0028 (207-424)||(148808-149027)
scaffold0028 (15-120)||(148615-148720)
[»] scaffold0140 (2 HSPs)
scaffold0140 (342-416)||(8419-8494)
scaffold0140 (169-237)||(8198-8266)
[»] scaffold0009 (2 HSPs)
scaffold0009 (369-424)||(181980-182035)
scaffold0009 (15-120)||(176621-176726)
[»] scaffold0148 (1 HSPs)
scaffold0148 (342-416)||(10751-10827)
[»] scaffold0036 (1 HSPs)
scaffold0036 (342-424)||(85696-85780)
[»] scaffold0087 (2 HSPs)
scaffold0087 (342-416)||(43961-44036)
scaffold0087 (342-416)||(36832-36907)
[»] scaffold0006 (3 HSPs)
scaffold0006 (342-415)||(133280-133354)
scaffold0006 (352-416)||(2514-2579)
scaffold0006 (352-416)||(5705-5770)
[»] scaffold0098 (1 HSPs)
scaffold0098 (355-415)||(45276-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (342-415)||(17286-17361)
[»] scaffold0674 (1 HSPs)
scaffold0674 (43-81)||(4167-4205)
[»] scaffold0665 (1 HSPs)
scaffold0665 (15-45)||(8091-8121)
[»] scaffold0565 (1 HSPs)
scaffold0565 (43-81)||(3042-3080)
[»] scaffold0154 (1 HSPs)
scaffold0154 (374-407)||(11500-11533)
[»] scaffold0014 (1 HSPs)
scaffold0014 (47-83)||(80946-80982)
[»] scaffold0002 (1 HSPs)
scaffold0002 (47-83)||(434218-434254)


Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 7289742 - 7289997
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  7289742 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 7289841  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289842 atattgtgagagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 7289941  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289942 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 7289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 25328095 - 25328349
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||| | ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  25328095 acttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 25328194  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25328195 atgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttct 25328293  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328294 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 25328349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 6311474 - 6311311
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||    
T  6311474 tagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 6311376  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311375 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 6311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 39784665 - 39784893
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| ||||||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  39784665 atggggtgtgtgcctttgatgagagagtctcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39784764  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39784765 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 39784861  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  39784862 ctcccccagattaggccatattggctgaactg 39784893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 36979555 - 36979391
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  36979555 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 36979457  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979456 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 36979391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 30655824 - 30655660
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  30655824 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 30655726  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655725 acactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactg 30655660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 33037726 - 33037889
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||||||| |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  33037726 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 33037824  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037825 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 33037889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 35745624 - 35745405
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||      
T  35745624 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg- 35745527  T
Q  304 tctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35745526 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 35745428  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  35745427 attaggccacattggctgaactg 35745405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 18853086 - 18853251
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaacc-ttttgt 358  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||| ||||||| ||||  ||| ||||||||| ||||||    
T  18853086 tagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttttgt 18853184  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18853185 aacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactg 18853251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 18870480 - 18870645
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaacc-ttttgt 358  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| ||||  ||| ||||||||| ||||||    
T  18870480 tagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttttgt 18870578  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18870579 aacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactg 18870645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 4759994 - 4760158
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||||| | |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  4759994 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 4760092  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4760093 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactg 4760158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 10689061 - 10689226
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaa-gggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgt 358  Q
    |||||||||| ||||||||||||||||||| || | ||||||||||||||| | |||| ||||||| ||||||||||||  ||| ||||||||| | |||    
T  10689061 tagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctctgt 10689159  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10689160 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 10689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 6311763 - 6311659
Alignment:
Q  16 ataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttct 115  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6311763 ataaggacttgtcaaccttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttct 6311664  T
Q  116 tgtgc 120  Q
    |||||    
T  6311663 tgtgc 6311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 10688771 - 10688875
Alignment:
Q  16 ataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttct 115  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10688771 ataaggacttgtcaaccttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttct 10688870  T
Q  116 tgtgc 120  Q
    |||||    
T  10688871 tgtgc 10688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 10684116 - 10684335
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  10684116 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 10684213  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10684214 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 10684312  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  10684313 attaggccacattggctgaactg 10684335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 7289599 - 7289704
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| ||||||| || | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289599 gataaggacttgtctaccttggatcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 7289698  T
Q  115 ttgtgc 120  Q
    ||||||    
T  7289699 ttgtgc 7289704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 25327835 - 25327940
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25327835 gataaggacttgtcaaccttgggtccgttgcagctcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 25327934  T
Q  115 ttgtgc 120  Q
    ||||||    
T  25327935 ttgtgc 25327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 1261874 - 1262037
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | || | ||||||| ||||| | ||||   ||||||||||| |||||||    
T  1261874 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgtacttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 1261972  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  1261973 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactg 1262037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 6311621 - 6311534
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6311621 acttggatagcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 6311534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 18852941 - 18853028
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18852941 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 18853028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 261 - 416
Target Start/End: Original strand, 31071149 - 31071304
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  31071149 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 31071247  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  31071248 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 31071304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 30655969 - 30655882
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30655969 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 30655882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 39784496 - 39784601
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39784496 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 39784595  T
Q  115 ttgtgc 120  Q
    ||||||    
T  39784596 ttgtgc 39784601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 18870338 - 18870422
Alignment:
Q  172 tggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18870338 tggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 18870422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 10688914 - 10689001
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  10688914 acttggataacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 10689001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 25327969 - 25328070
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||| | ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  25327969 acttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 25328068  T
Q  269 at 270  Q
    ||    
T  25328069 at 25328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 33037582 - 33037669
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  33037582 acttggattacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 33037669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 18852798 - 18852902
Alignment:
Q  15 gataaggacttgtca-accttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| |||| |||||||||| |  ||| ||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18852798 gataaggactggtcataccttgggtcagacgcagatcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtt 18852895  T
Q  114 cttgtgc 120  Q
    |||||||    
T  18852896 cttgtgc 18852902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 26287985 - 26287915
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26287915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 26301242 - 26301172
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26301172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 26313236 - 26313166
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26313166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 30656111 - 30656008
Alignment:
Q  15 gataaggacttgtcaa-ccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| ||||| ||||||||| |  |||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30656111 gataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtt 30656014  T
Q  114 cttgtg 119  Q
    ||||||    
T  30656013 cttgtg 30656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 4456125 - 4456050
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4456125 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 4456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 4759849 - 4759936
Alignment:
Q  170 cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg-aaaaatattgtaatcaccttgg 256  Q
    ||||||| |||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||    
T  4759849 cttggattgcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatcaccttgg 4759936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 4759735 - 4759809
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4759735 gcaaatcgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 4759809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 35745807 - 35745702
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  35745807 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 35745708  T
Q  115 ttgtgc 120  Q
    ||||||    
T  35745707 ttgtgc 35745702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 1261731 - 1261818
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  1261731 acttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 1261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 36979699 - 36979613
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  ||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||    
T  36979699 acttggattacaaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggttggg-aaaacattgtaatcaccttgg 36979613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 18870193 - 18870296
Alignment:
Q  16 ataaggacttgtca-accttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||| |||| |||||||||| |  ||| ||||||||||||||   | |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18870193 ataaggactggtcataccttgggtcagacgcagatcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttc 18870290  T
Q  115 ttgtgc 120  Q
    ||||||    
T  18870291 ttgtgc 18870296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 26403240 - 26403305
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26403240 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 26403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 19175737 - 19175829
Alignment:
Q  325 aagcttgaaggctagagttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||||   ||||||||||  |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  19175737 aagcttgcaggctatttttcttgtaactctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattgg 19175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 7412438 - 7412363
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  7412438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 7412363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 6127319 - 6127243
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| ||||||||    
T  6127319 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattgg 6127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 10683910 - 10684015
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  10683910 gataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 10684009  T
Q  115 ttgtgc 120  Q
    ||||||    
T  10684010 ttgtgc 10684015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 23799576 - 23799652
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||| |||||| ||||||||    
T  23799576 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattgg 23799652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 4696609 - 4696671
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 4696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 9765852 - 9765894
Alignment:
Q  374 tggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattgg 9765894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 33037490 - 33037543
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||| ||||||| ||||||| | |||||||||||||||||||||||||||    
T  33037490 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgc 33037543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 5702482 - 5702558
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| |||||  ||||||||| | |||||||||||||| |||||| ||||||||    
T  5702482 ttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattgg 5702558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 19752394 - 19752469
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  19752394 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattgg 19752469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 31071035 - 31071093
Alignment:
Q  198 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgg 31071093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 26288183 - 26288123
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||| ||||||| ||||||||    
T  26288183 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgg 26288123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 26301440 - 26301380
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||| ||||||| ||||||||    
T  26301440 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgg 26301380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 26313434 - 26313374
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||| ||||||| ||||||||    
T  26313434 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgg 26313374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 36979813 - 36979756
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtat 103  Q
    |||||||||||||||||    |||||||||||||||||| |||||||||||| |||||||    
T  36979813 gcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtat 36979756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 2627426 - 2627464
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  2627426 caaatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 3439292 - 3439361
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||| |||||||| || |||||||| |||||||||  |||||||||||||||||| |  ||||||||||||    
T  3439292 atcgtggcacgattg-ggaaaatcgtgacacgatttcaacagaggaagactagtataaa--gtgttcttgtgc 3439361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 5702288 - 5702346
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  5702288 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaatattgtaaacaccttgg 5702346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 7412629 - 7412588
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaa 237  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  7412629 gggttgagtgtctttgtagagaggatctcttgggttgggaaa 7412588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 407
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  374 tggattggagagctgctctctcccccagattagg 407  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 1261619 - 1261692
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    ||||||||||||||||    |||||||||| ||||||||  |||||||||| ||||||| ||  ||||||||||||    
T  1261619 caaatcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgc 1261692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1746700 - 1746664
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  1746700 aatcgtgacacgattttgggaaatcgtgacacgattt 1746664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 9054836 - 9054912
Alignment:
Q  342 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||  |||||| ||||||| || || |||||| |||||||||||||||| ||||| |||| ||||||||    
T  9054836 ttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattgg 9054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 19752175 - 19752260
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||||||| |  ||||||||||| ||||||||    
T  19752175 acttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtg--aaatattgtaaacaccttgg 19752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 34256986 - 34256950
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  34256986 aatcgtgacacgattttgggaaatcgtgacacgattt 34256950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 11857243 - 11856988
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  11857243 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 11857144  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857143 atattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 11857044  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11857043 catattggattggagagctgctctctcccccatattaggccatattggctgaactg 11856988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 22010513 - 22010768
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  22010513 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 22010612  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010613 atattgtgagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 22010712  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010713 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 22010768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 14737393 - 14737647
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  14737393 acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 14737492  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14737493 atagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttct 14737591  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737592 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 14737647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 14742253 - 14742507
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||    
T  14742253 acttggataacaaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcactttgggttttagggttc 14742352  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14742353 atagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttct 14742451  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14742452 catattggattggagagctgctctctcccccaaattaggtcatattggctgaactg 14742507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 188 - 424
Target Start/End: Complemental strand, 28184757 - 28184519
Alignment:
Q  188 gaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg---aaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggg 284  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||   ||||| || ||||||||||||| || ||||||||||  ||||||||||||    
T  28184757 gaacaaatgggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggttttagggttcatagtgtgagagtggg 28184658  T
Q  285 gaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggaga 384  Q
     ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  28184657 aaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtg-ttgtaaccttttgtaacactttctcatattagattggaga 28184559  T
Q  385 gctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28184558 gctgctctctcccccagattaggccatattggctgaactg 28184519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 28155387 - 28155640
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||| | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| |||||||||||| ||||||||||||||||  | ||||||||    
T  28155387 acttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttc 28155486  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  28155487 atagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaa-ttcttgtaaccttttgtaacactttct 28155584  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28155585 catattggattggagagctgctctctcccccagattaggccacattggctgaactg 28155640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 194 - 424
Target Start/End: Complemental strand, 6438743 - 6438515
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  6438743 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 6438644  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6438643 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 6438547  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  6438546 ctcccccagattaggccatattggctgaactg 6438515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 6005650 - 6005431
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||      
T  6005650 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg- 6005553  T
Q  304 tctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  6005552 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 6005454  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  6005453 attaggccacattggctgaactg 6005431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 16838977 - 16838758
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | ||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  16838977 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 16838879  T
Q  305 ctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    |||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  16838878 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 16838780  T
Q  403 ttaggccatattggctgaactg 424  Q
    ||| |||| |||||||||||||    
T  16838779 ttaagccacattggctgaactg 16838758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 33330297 - 33330516
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | ||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  33330297 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33330395  T
Q  305 ctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    ||||||||   ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33330396 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 33330494  T
Q  403 ttaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||    
T  33330495 ttaggccacattggctgaactg 33330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 11857396 - 11857292
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857396 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgatt-tgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 11857298  T
Q  115 ttgtgc 120  Q
    ||||||    
T  11857297 ttgtgc 11857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 5674688 - 5674853
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttttgt 358  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||| | ||||||| ||||| | ||||  ||| ||||||||| |||||    
T  5674688 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgt 5674786  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674787 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 5674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 33335794 - 33336013
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | ||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  33335794 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33335892  T
Q  305 ctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    ||||||||   ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33335893 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 33335991  T
Q  403 ttaggccatattggctgaactg 424  Q
    ||||| || |||||||||||||    
T  33335992 ttaggtcacattggctgaactg 33336013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 14737237 - 14737342
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14737237 gataaggacttgtcaaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 14737336  T
Q  115 ttgtgc 120  Q
    ||||||    
T  14737337 ttgtgc 14737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 22010360 - 22010465
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22010360 gataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttc 22010459  T
Q  115 ttgtgc 120  Q
    ||||||    
T  22010460 ttgtgc 22010465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 14742097 - 14742202
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14742097 gataaggacttgtcaaccttgggtccgttgcagatcgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 14742196  T
Q  115 ttgtgc 120  Q
    ||||||    
T  14742197 ttgtgc 14742202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 5674544 - 5674631
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  5674544 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 5674631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 28155242 - 28155347
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   ||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  28155242 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttc 28155341  T
Q  115 ttgtgc 120  Q
    ||||||    
T  28155342 ttgtgc 28155347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 6438912 - 6438807
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||  |||||||| |||||||||||||   ||||||||||| |||||||||||||| | | ||||||||||||||||||||    
T  6438912 gataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttc 6438813  T
Q  115 ttgtgc 120  Q
    ||||||    
T  6438812 ttgtgc 6438807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 16839159 - 16839054
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||   ||||||||||| |||||||||||||| | | ||||||||||||  ||||||    
T  16839159 gataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttc 16839060  T
Q  115 ttgtgc 120  Q
    ||||||    
T  16839059 ttgtgc 16839054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 6005835 - 6005730
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  6005835 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 6005736  T
Q  115 ttgtgc 120  Q
    ||||||    
T  6005735 ttgtgc 6005730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 33330104 - 33330209
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  33330104 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 33330203  T
Q  115 ttgtgc 120  Q
    ||||||    
T  33330204 ttgtgc 33330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 5757478 - 5757553
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5757478 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 5757553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 5343893 - 5343788
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| |   ||||||||||||  ||||||    
T  5343893 gataaggactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttc 5343794  T
Q  115 ttgtgc 120  Q
    ||||||    
T  5343793 ttgtgc 5343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 33335601 - 33335706
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  33335601 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 33335700  T
Q  115 ttgtgc 120  Q
     |||||    
T  33335701 atgtgc 33335706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 5572240 - 5572316
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  5572240 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgg 5572316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 10077176 - 10077240
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  10077176 ttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 10077240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 21356133 - 21356058
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  || ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  21356133 ttcttgtaactcttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 21356058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 21801343 - 21801428
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    |||||||||| |||||||||||||||  || || |||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  21801343 ttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactg 21801428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 22709102 - 22709041
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattg 22709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 18232943 - 18232867
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| || ||||||| | ||||||||||||||||||||| ||||||||    
T  18232943 ttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 5266469 - 5266418
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgt 118  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  5266469 aaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 424
Target Start/End: Complemental strand, 4630040 - 4629967
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactg 4629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 31086472 - 31086557
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    |||||||||| | |||||||||||||| ||||| |||||||||||| |||||||||||| |||||||  |||||||| ||||||||    
T  31086472 ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactg 31086557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 31979611 - 31979535
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||| ||||||||| || || |||||||||| ||||||||||||||||||||| | ||||||||    
T  31979611 ttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattgg 31979535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 22963797 - 22963723
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||    
T  22963797 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattg 22963723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 23824596 - 23824670
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||    
T  23824596 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattg 23824670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 16554659 - 16554720
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||| |||||    
T  16554659 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaaggctagtataaattgt 16554720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 16631215 - 16631276
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||| |||||    
T  16631215 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaaggctagtataaattgt 16631276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 16652902 - 16652963
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||| |||||    
T  16652902 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaaggctagtataaattgt 16652963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 411793 - 411830
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    |||||||||||||||||||||||||||||| |||||||    
T  411793 caaatcgtgacacgattgtgggaaatcgtgacacgatt 411830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 22709185 - 22709137
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagg 309  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||    
T  22709185 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactagg 22709137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 3073235 - 3073197
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  3073235 caaatcgtgacacgattgttggaaatcgtgacacgattt 3073197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 16578896 - 16578835
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| |||||||||||| |||||||||  |||||||||  ||||||| |||||    
T  16578896 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaagggtagtataaattgt 16578835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 16616484 - 16616545
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| |||||||||||| |||||||||  |||||||||  ||||||| |||||    
T  16616484 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaagggtagtataaattgt 16616545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 22709326 - 22709239
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggat 258  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||| ||||||| ||||||||||    
T  22709326 acttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 22709239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 31936651 - 31936609
Alignment:
Q  374 tggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||||||||| |||||| |||| ||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattgg 31936609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 5017482 - 5017542
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt 414  Q
    ||||||||||||| ||||| | |||||||| | |||||||||||| |||||||| ||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatt 5017542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 1456978 - 1457233
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  1456978 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 1457077  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457078 atattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 1457177  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1457178 catattggattggagagctgctctctcccccagattaggccacattggctgaactg 1457233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 43592548 - 43592293
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  43592548 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 43592449  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592448 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 43592349  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592348 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 43592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 43598993 - 43598738
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  43598993 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 43598894  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598893 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 43598794  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598793 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 43598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 43604485 - 43604230
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  43604485 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 43604386  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604385 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 43604286  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604285 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 43604230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 43609977 - 43609722
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  43609977 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 43609878  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609877 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 43609778  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609777 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 43609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 27450083 - 27449828
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  27450083 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 27449984  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449983 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 27449884  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27449883 catattggattggagagctgctctctcccccagattaggctatattggctgaactg 27449828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 27445239 - 27444984
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  27445239 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 27445140  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445139 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 27445040  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27445039 catattggattggagagctgctctctcccccagattaggctatattgcctgaactg 27444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 15044955 - 15044700
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtt-gggaaaaatattgtaatcaccttggattatagggtt 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || |||||||    
T  15044955 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggttttagggtt 15044856  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
    |||  |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  15044855 catagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttc 15044757  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15044756 tcatattggattggagagctgctctctcccccatattaggccatattggctgaactg 15044700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 30631584 - 30631420
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  30631584 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctttgta 30631485  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30631484 acactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactg 30631420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 28807429 - 28807643
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 306  Q
    ||||| ||||||||| |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||||||||||| |||    
T  28807429 ctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtaga-tct 28807527  T
Q  307 agggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattag 406  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  28807528 agggtttgttcatgtgtaaagcttgaaagctaga-ttcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattag 28807625  T
Q  407 gccatattggctgaactg 424  Q
    |||| |||||||||||||    
T  28807626 gccacattggctgaactg 28807643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 264 - 424
Target Start/End: Complemental strand, 31180388 - 31180228
Alignment:
Q  264 ggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgtaaca 362  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  31180388 ggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaaccctttgtaaca 31180290  T
Q  363 ctttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180289 ctttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 31180228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 37556478 - 37556693
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 306  Q
    ||||| || |||||| |||| |||||||||||  ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||||||||||  |||    
T  37556478 ctttgatgtgagtgtttcttaggttgggaaaac-attgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37556575  T
Q  307 agggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 405  Q
    |||||| ||||||||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37556576 agggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 37556674  T
Q  406 ggccatattggctgaactg 424  Q
    ||||| |||||||||||||    
T  37556675 ggccacattggctgaactg 37556693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 37561300 - 37561515
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 306  Q
    ||||| || |||||| |||| |||||||||||  ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||||||||||  |||    
T  37561300 ctttgatgtgagtgtttcttaggttgggaaaac-attgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37561397  T
Q  307 agggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 405  Q
    |||||| ||||||||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37561398 agggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 37561496  T
Q  406 ggccatattggctgaactg 424  Q
    ||||| |||||||||||||    
T  37561497 ggccacattggctgaactg 37561515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 2785608 - 2785389
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||      
T  2785608 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg- 2785511  T
Q  304 tctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    ||||||||| ||||||| ||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2785510 tctagggtttgttcatgagtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 2785412  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  2785411 attaggccacattggctgaactg 2785389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 33791549 - 33791330
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||      
T  33791549 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg- 33791452  T
Q  304 tctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  33791451 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctttcccccag 33791353  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  33791352 attaggccacattggctgaactg 33791330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 38192350 - 38192187
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  38192350 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 38192252  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38192251 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 38192187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 38219575 - 38219412
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  38219575 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 38219477  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38219476 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 38219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 24136025 - 24135862
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  24136025 tagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24135927  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| || || || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  24135926 cactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactg 24135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 31396843 - 31397064
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| |||  ||||||||||||     
T  31396843 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggatgggaaaatgccaaagggtaga- 31396940  T
Q  304 tctagggttagtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccc 399  Q
    |||||||||  ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  31396941 tctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccc 31397039  T
Q  400 agattaggccatattggctgaactg 424  Q
    ||||||||||| |||||||||||||    
T  31397040 agattaggccacattggctgaactg 31397064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 30631729 - 30631642
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30631729 acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 30631642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 1456809 - 1456914
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| |||||||||| | |||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1456809 gataaggacttgtctaccttgggtcagatgcaaatcgtgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttc 1456908  T
Q  115 ttgtgc 120  Q
    ||||||    
T  1456909 ttgtgc 1456914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 15045109 - 15045004
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15045109 gataaggactggtcaacctggggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 15045010  T
Q  115 ttgtgc 120  Q
    ||||||    
T  15045009 ttgtgc 15045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 421
Target Start/End: Complemental strand, 35387839 - 35387679
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  |  ||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  35387839 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttattcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 35387741  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaa 421  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  35387740 cactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaa 35387679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 31180536 - 31180449
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31180536 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 31180449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 31401700 - 31401921
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| |||  ||||||||||||     
T  31401700 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggatgggaaaatgccaaagggtaga- 31401797  T
Q  304 tctagggttagtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccc 399  Q
    ||||| |||  ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  31401798 tctagagttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccc 31401896  T
Q  400 agattaggccatattggctgaactg 424  Q
    | ||||||||| |||||||||||||    
T  31401897 atattaggccacattggctgaactg 31401921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 33768314 - 33768193
Alignment:
Q  304 tctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  33768314 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctcccccccag 33768216  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  33768215 attaggccacattggctgaactg 33768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 31180678 - 31180573
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||||||||| |  ||||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31180678 gataaggactggtcaaccttgggtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttc 31180579  T
Q  115 ttgtgc 120  Q
    ||||||    
T  31180578 ttgtgc 31180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 27445395 - 27445291
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27445395 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttc 27445297  T
Q  115 ttgtgc 120  Q
    ||||||    
T  27445296 ttgtgc 27445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 27450238 - 27450134
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27450238 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttc 27450140  T
Q  115 ttgtgc 120  Q
    ||||||    
T  27450139 ttgtgc 27450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 43599146 - 43599043
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  43599146 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttc 43599048  T
Q  115 ttgtg 119  Q
    |||||    
T  43599047 ttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 43604638 - 43604535
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  43604638 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttc 43604540  T
Q  115 ttgtg 119  Q
    |||||    
T  43604539 ttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 43610130 - 43610027
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  43610130 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttc 43610032  T
Q  115 ttgtg 119  Q
    |||||    
T  43610031 ttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 24136169 - 24136082
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  24136169 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatcaccttgg 24136082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 43592701 - 43592597
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| |  |||||||||||||||||| |||||||||||| ||||||| |||| ||||||| ||||||||||||||||||    
T  43592701 gataaggactggtctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttc 43592603  T
Q  115 ttgtgc 120  Q
    ||||||    
T  43592602 ttgtgc 43592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 28807247 - 28807352
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   ||||| |||||||||||||||||||| | | |||||||||||||| |||||    
T  28807247 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttc 28807346  T
Q  115 ttgtgc 120  Q
    ||||||    
T  28807347 ttgtgc 28807352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 37561118 - 37561223
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| || ||||| ||| |||||||| ||||||||| |||   |||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  37561118 gataaggactggttaacctggggaccgttgcagatcgtgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttc 37561217  T
Q  115 ttgtgc 120  Q
    ||||||    
T  37561218 ttgtgc 37561223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 33768600 - 33768495
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  33768600 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttc 33768501  T
Q  115 ttgtgc 120  Q
    ||||||    
T  33768500 ttgtgc 33768495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 33791732 - 33791627
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  33791732 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 33791633  T
Q  115 ttgtgc 120  Q
    ||||||    
T  33791632 ttgtgc 33791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 9353332 - 9353407
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9353332 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 9353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 36932350 - 36932425
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36932350 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36932425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 2785791 - 2785686
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| |||  ||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  2785791 gataaggactggtcaacctggggagcgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 2785692  T
Q  115 ttgtgc 120  Q
    ||||||    
T  2785691 ttgtgc 2785686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 416
Target Start/End: Complemental strand, 15464697 - 15464554
Alignment:
Q  272 ttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc-tca 370  Q
    ||||||||||||| |||||| || ||||||||  ||||  | |||| ||||||| ||||| | ||||   ||||||||||  |||||||||||||| |||    
T  15464697 ttgtgagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaactctttgtaacactttcatca 15464600  T
Q  371 tattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    || |||||||||||||||||||||||||||||||||  ||||||||    
T  15464599 tagtggattggagagctgctctctcccccagattagatcatattgg 15464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 37556320 - 37556401
Alignment:
Q  39 ccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||| |||||||||||||   |||||||| ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  37556320 ccgttgcagatcgtgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 37556401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 10281849 - 10281773
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  10281849 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattgg 10281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 35387982 - 35387895
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||    
T  35387982 acttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgg 35387895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 3880397 - 3880321
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||| ||||||||    
T  3880397 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattgg 3880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 11916971 - 11917047
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  11916971 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattgg 11917047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 31396661 - 31396766
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   ||| ||||||| |||||||||||||| | | |||| |||| ||  ||||||    
T  31396661 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttc 31396760  T
Q  115 ttgtgc 120  Q
    ||||||    
T  31396761 ttgtgc 31396766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 31401518 - 31401623
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   ||| ||||||| |||||||||||||| | | |||| |||| ||  ||||||    
T  31401518 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttc 31401617  T
Q  115 ttgtgc 120  Q
    ||||||    
T  31401618 ttgtgc 31401623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 29751543 - 29751468
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||| ||| |||||||| ||||||| ||| |||||||| ||||||||||  ||||||||||||    
T  29751543 gcaaatcgtgacacgatt-tggaaaatcgtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgc 29751468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 12084175 - 12084246
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccata 412  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| ||||    
T  12084175 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcata 12084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 14520327 - 14520252
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| ||||||| |||||||||||| |||| |||||||| ||||||||    
T  14520327 ttcttgtaactctttgtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattgg 14520252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 28832356 - 28832281
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| ||||||||    
T  28832356 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattgg 28832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 38219718 - 38219631
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||    
T  38219718 acttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgg 38219631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 17003970 - 17004035
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||| || |||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  17003970 cttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattgg 17004035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 10593048 - 10593118
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||||||||||| ||  ||||||||||||    
T  10593048 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaagactagtatgta-agtgttcttgtgc 10593118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 19588844 - 19588768
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||  ||||||||    
T  19588844 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattgg 19588768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 9789701 - 9789663
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  9789701 caaatcgtgacacgattgtgggaaatcgtgacacgattt 9789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 18442125 - 18442087
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18442125 caaatcgtgacacgattgtgggaaatcgtgacacgattt 18442087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 29720073 - 29720110
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29720073 caaatcgtgacacgattgtgggaaatcgtgacacgatt 29720110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 29722260 - 29722297
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29722260 caaatcgtgacacgattgtgggaaatcgtgacacgatt 29722297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 42127410 - 42127483
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt 414  Q
    ||||||||||   ||||||||||||| || || |||||||| | ||||||||||||||||||||||| ||||||    
T  42127410 ttcttgtaactcattgtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatatt 42127483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 4410241 - 4410283
Alignment:
Q  374 tggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattgg 4410283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 25077811 - 25077849
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  25077811 tgcaaatcgtgtcacgattgtgggaaatcgtgacacgat 25077849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 25135780 - 25135818
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  25135780 tgcaaatcgtgtcacgattgtgggaaatcgtgacacgat 25135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 24136282 - 24136208
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||    ||||||||||||||||||   |||||||||  ||||||||||  ||||||||||||    
T  24136282 gcaaatcgtgacacgatct--ggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgc 24136208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 30631841 - 30631804
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  30631841 caaatcgtgacacgattttgggaaatcgtgacacgatt 30631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 24553308 - 24553376
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 237  Q
    ||||||||  ||||||||| |||  | ||||||||||||||||| | |||  |||||||||||||||||    
T  24553308 acttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttgggaaa 24553376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 32636510 - 32636546
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  32636510 aatcgtgacacgattttgggaaaacgtggcacgattt 32636546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 22173011 - 22173266
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  22173011 acttggatagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 22173110  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173111 atattaggagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 22173210  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173211 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 22173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 18656702 - 18656449
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg-attatagggtt 267  Q
    ||||||| | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| |||||||||||| |||||||||||||||| |||| ||||||    
T  18656702 acttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatta-agggtt 18656604  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
     ||  |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18656603 tatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagt-cttgtaaccttttgtaacactttc 18656506  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656505 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 18656449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 28503783 - 28503947
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  28503783 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 28503882  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28503883 acactttctcatattggattggagagctgctctcttccccagattaggccatattggctgaactg 28503947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 7167422 - 7167258
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  7167422 tagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 7167324  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7167323 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 7167258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 261 - 394
Target Start/End: Original strand, 28501616 - 28501750
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagag-ttcttgtaaccttttgta 359  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  28501616 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 28501715  T
Q  360 acactttctcatattggattggagagctgctctct 394  Q
    |||||||||||||||||||||||||||||||||||    
T  28501716 acactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 2676939 - 2677158
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | ||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  2676939 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2677037  T
Q  305 ctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    ||||||||   ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2677038 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 2677136  T
Q  403 ttaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||    
T  2677137 ttaggccacattggctgaactg 2677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 8738982 - 8739146
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||| ||  | ||||||||||||||| | |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 8739080  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8739081 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 8739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 9091220 - 9091384
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||| ||  | ||||||||||||||| | |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 9091318  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9091319 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 9091384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 2672783 - 2673002
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | || |||||||  ||||||  |||| ||| ||||||||||||| |    
T  2672783 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttaaggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2672881  T
Q  305 ctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    ||||||||   ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2672882 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 2672980  T
Q  403 ttaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||    
T  2672981 ttaggccacattggctgaactg 2673002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 40372715 - 40372878
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| || |||||||||||||||||  | ||||||||||||||| | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  40372715 tagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 40372813  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372814 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 40372878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 8477542 - 8477376
Alignment:
Q  261 tagggttcatgttgtgagagtgggg-aaacaccaaagggtagaatctagggttagttcat-gtgtaaagcttgaaggctagagtt-cttgtaaccttttg 357  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||  | ||| || |||||| ||||| | ||||  ||| ||||||||| ||||    
T  8477542 tagggttcatattgtgagagtgggggaaacaccaaagggtagaatctaggtcttgtttattgtgtaa-gcttgcaagctattgtttcttgtaaccctttg 8477444  T
Q  358 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477443 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 8477376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 2671505 - 2671669
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||||| | | || ||||||| ||||| |  |||  ||| ||||||||| ||||||    
T  2671505 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaa-gcttgcaatctattgtttcttgtaaccctttgta 2671603  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671604 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 2671669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 8512450 - 8512231
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  8512450 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 8512353  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  8512352 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 8512254  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  8512253 attaggccacattggctgaactg 8512231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 8517330 - 8517111
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  8517330 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 8517233  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  8517232 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 8517134  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  8517133 attaggccacattggctgaactg 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 24968340 - 24968121
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||  | ||||||||||  ||||||  |||| ||  ||||||||||||| |    
T  24968340 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaagtaccaaagggtaga-t 24968242  T
Q  305 ctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    || ||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||| | |    
T  24968241 ctcgggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctccccaaaa 24968143  T
Q  403 ttaggccatattggctgaactg 424  Q
    ||| |||| |||||||||||||    
T  24968142 ttaagccacattggctgaactg 24968121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 28503490 - 28503595
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28503490 gataaggacttgtcaaccttgggtcagacgcaaatcgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttc 28503589  T
Q  115 ttgtgc 120  Q
    ||||||    
T  28503590 ttgtgc 28503595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 26928510 - 26928674
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   || ||||||||| ||||||    
T  26928510 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctattttttcttgtaaccctttgta 26928608  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  26928609 acactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactg 26928674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 261 - 416
Target Start/End: Complemental strand, 32143498 - 32143343
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  32143498 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 32143400  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32143399 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 32143343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 28501323 - 28501428
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||||||||||||| |  ||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  28501323 gataaggacttgtcaaccttgggtcagacgcaaatcatgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtac 28501422  T
Q  115 ttgtgc 120  Q
    ||||||    
T  28501423 ttgtgc 28501428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 28503637 - 28503725
Alignment:
Q  169 acttggatagcaaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28503637 acttggataacaaaggagggaaccaaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 28503725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 8738837 - 8738924
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  8738837 acttggattgcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgg 8738924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 7167568 - 7167480
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga-aaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  7167568 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaacattgtaatcaccttgg 7167480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 2671360 - 2671447
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2671360 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 2671447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 40372570 - 40372657
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  40372570 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 40372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 1306125 - 1305962
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || |||||||| ||| |  | |||| ||||||| ||||| |  |||   ||||||||||| |||||||    
T  1306125 tagggttcatattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 1306027  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| || || ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1306026 cactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactg 1305962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 416
Target Start/End: Complemental strand, 27453135 - 27452980
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || ||||||||  ||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  27453135 tagggttcatattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 27453037  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  27453036 cactttcatcatagtggattggagagctgctctctcccccggattaggtcatattgg 27452980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 28501470 - 28501558
Alignment:
Q  169 acttggatagcaaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28501470 acttggataacaaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 28501558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 8477687 - 8477600
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  || ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8477687 acttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 8477600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 9091075 - 9091162
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  9091075 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgg 9091162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 22172884 - 22172957
Alignment:
Q  46 aaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172884 aaatcgtggcacgatt-tgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 22172957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 7167711 - 7167607
Alignment:
Q  15 gataaggacttgtca-accttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| |||| |||||||||| |  ||||||||||||||||||   | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7167711 gataaggactggtcataccttgggtcagacgcaaatcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgtt 7167614  T
Q  114 cttgtgc 120  Q
    |||||||    
T  7167613 cttgtgc 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 32475603 - 32475499
Alignment:
Q  319 tgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggc 417  Q
    |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32475603 tgtgtaaagcttgataagctaga-ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagattaggccacattggc 32475506  T
Q  418 tgaactg 424  Q
    |||||||    
T  32475505 tgaactg 32475499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 32480461 - 32480357
Alignment:
Q  319 tgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggc 417  Q
    |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32480461 tgtgtaaagcttgataagctaga-ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagattaggccacattggc 32480364  T
Q  418 tgaactg 424  Q
    |||||||    
T  32480363 tgaactg 32480357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 24968533 - 24968428
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||||||   |||||||||||||||||||||||||| | ||||||||||| ||  ||||||    
T  24968533 gataaggactggtcaacctggggaccgttgcaaatcgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttc 24968434  T
Q  115 ttgtgc 120  Q
    ||||||    
T  24968433 ttgtgc 24968428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 2672590 - 2672695
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  2672590 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 2672689  T
Q  115 ttgtgc 120  Q
    ||||||    
T  2672690 ttgtgc 2672695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 2676746 - 2676851
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  2676746 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 2676845  T
Q  115 ttgtgc 120  Q
    ||||||    
T  2676846 ttgtgc 2676851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 18656857 - 18656752
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  18656857 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 18656758  T
Q  115 ttgtgc 120  Q
    ||||||    
T  18656757 ttgtgc 18656752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 22172833 - 22172900
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  22172833 gataaggactggtcaaccttggttccgttgcaaatcgtgacacgatt-tgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 8370476 - 8370551
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8370476 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 8370551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 16264447 - 16264372
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  16264447 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 16264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 27352252 - 27352356
Alignment:
Q  15 gataaggacttgtca-accttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| |||| |||||||| | |  ||||||||||||||||||   |||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  27352252 gataaggactggtcataccttgggacggacgcaaatcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaaggctaatatatattgtgtt 27352349  T
Q  114 cttgtgc 120  Q
    |||||||    
T  27352350 cttgtgc 27352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 27974942 - 27975017
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27974942 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 27975017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 40372476 - 40372531
Alignment:
Q  65 ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40372476 ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 40372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 2671268 - 2671321
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2671268 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 2671321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 1736294 - 1736370
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  1736294 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 1736370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 416
Target Start/End: Original strand, 6794624 - 6794778
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||  | ||| || ||||||||  ||||  | |||| ||||||| ||||| | ||||   ||||||||||  |||||||    
T  6794624 tagggttcatattgtgagagtgggtga-cacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctaattttcttgtaactctttgtaa 6794721  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  6794722 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 6794778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 18552872 - 18552948
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  18552872 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 18552948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 36029191 - 36029115
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  36029191 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattgg 36029115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 48438312 - 48438236
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  48438312 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 48438236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 8738743 - 8738798
Alignment:
Q  65 ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  8738743 ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgc 8738798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 9090981 - 9091036
Alignment:
Q  65 ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  9090981 ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgc 9091036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 21711320 - 21711245
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  21711320 ttcttgtaactctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattgg 21711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 27986449 - 27986511
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 27986511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 33386669 - 33386731
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 33386731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 30709779 - 30709855
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  30709779 ttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 30709855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 8512656 - 8512551
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  8512656 gataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 8512557  T
Q  115 ttgtgc 120  Q
    ||||||    
T  8512556 ttgtgc 8512551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 8517536 - 8517431
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  8517536 gataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 8517437  T
Q  115 ttgtgc 120  Q
    ||||||    
T  8517436 ttgtgc 8517431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 32475900 - 32475795
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||| | | ||| |||||||| |||||||||||||   |||||||||||||||||||||||| | | | ||||||||| ||  ||||||    
T  32475900 gataaggactggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttc 32475801  T
Q  115 ttgtgc 120  Q
    ||||||    
T  32475800 ttgtgc 32475795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 3715991 - 3716067
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| || |||||||| ||||||||    
T  3715991 ttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattgg 3716067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 25795879 - 25795803
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||| ||||||||||| || || | |||||||||||||||||||||||||||||||| ||||||||    
T  25795879 ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattgg 25795803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 40592771 - 40592847
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||||| ||||||||| ||||||||    
T  40592771 ttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattgg 40592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 26299086 - 26299011
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| | |||||||    
T  26299086 ttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattg 26299011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 32480758 - 32480653
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||| | | ||| |||||||| |||||||||||||   ||||||||||||||||||||||||   | | ||||||||| ||  ||||||    
T  32480758 gataaggactggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttc 32480659  T
Q  115 ttgtgc 120  Q
    ||||||    
T  32480658 ttgtgc 32480653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 40844749 - 40844674
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||| |||||||||| |||||||||||| ||||||||    
T  40844749 ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattgg 40844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 37466388 - 37466313
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||| ||||||||||||||||||| ||||||||    
T  37466388 ttcttgtaactcattgtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattgg 37466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 800793 - 800831
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  800793 caaatcgtgacacgattgtgggaaatcgtgacacgattt 800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 1306239 - 1306181
Alignment:
Q  198 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||    
T  1306239 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgg 1306181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 1417493 - 1417555
Alignment:
Q  355 ttgtaacactttct-catattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||| | || |||||||||| | ||||||||||||||||||||| ||||||||    
T  1417493 ttgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattgg 1417555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 39039995 - 39040057
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||| ||||| |||||||||||| || ||||| |||||||||||| ||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattgg 39040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 4386947 - 4386988
Alignment:
Q  371 tattggattggagagctgctctctcccccagattaggccata 412  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  4386947 tattggattggagagctgctctctcccccagagtaggtcata 4386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 6716290 - 6716359
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||| ||| |||||||| |||||||||  |||||||||||||||||| |  ||||||||||||    
T  6716290 atcgtgacacgatt-tggaaaatcgtgacacgatttcaacagaggaagactagtataaa--gtgttcttgtgc 6716359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 47923895 - 47923971
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||| ||||||| ||||| | ||||| || |||||||||||||| |||||||| ||||||||    
T  47923895 ttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattgg 47923971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 3323680 - 3323755
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||| |||||| ||||||||||| ||||||||    
T  3323680 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 424
Target Start/End: Complemental strand, 10207983 - 10207948
Alignment:
Q  389 ctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||| |||||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactg 10207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 25637118 - 25637156
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  25637118 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 25637156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 6718474 - 6718543
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||| ||  |||||||| |||||||||  |||||||||||||||||| |  ||||||||||||    
T  6718474 atcgtgacacgatt-tgaaaaatcgtgacacgatttcaacagaggaagactagtataaa--gtgttcttgtgc 6718543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 407
Target Start/End: Complemental strand, 53894119 - 53894082
Alignment:
Q  370 atattggattggagagctgctctctcccccagattagg 407  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  53894119 atattggattggagggctgctctctcccccagactagg 53894082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 3393293 - 3393329
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  3393293 aatcgtgacacgattttgggaaatcgtgacacgattt 3393329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 4386774 - 4386831
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttg 255  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||| |||||||||||||||    
T  4386774 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcaccttg 4386831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 5258626 - 5258590
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  5258626 aatcgtgacacgattttgggaaatcgtgacacgattt 5258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 8477801 - 8477744
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtat 103  Q
    |||||||||||||||||    |||||||||| ||||||| |||||||||||| |||||||    
T  8477801 gcaaatcgtgacacgatct--ggaaatcgtgacacgattgcttcagaggaaggctagtat 8477744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 24695153 - 24695229
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| |||||  ||||| ||| | |||||||||||  |||||||| ||||||||    
T  24695153 ttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattgg 24695229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 27986226 - 27986294
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 237  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  |||||||||||||||||    
T  27986226 acttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 27986294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 12397180 - 12396925
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  12397180 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 12397081  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12397080 atattgtgatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagttcttgtaaccttttgtaacactttct 12396981  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12396980 catattggattggagagctgttctctcccccagattaggccatattggctgaactg 12396925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 184 - 424
Target Start/End: Complemental strand, 12406585 - 12406345
Alignment:
Q  184 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtgg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||    
T  12406585 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggcttttagggttcatattgtgagagtgg 12406486  T
Q  284 ggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggag 383  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406485 ggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggag 12406386  T
Q  384 agctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||  |||||||||||||||||||||||||||||||||||    
T  12406385 agctattctctcccccagattaggccatattggctgaactg 12406345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 24024143 - 24024397
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| || ||||||||    
T  24024143 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcaccgtgggttttagggttc 24024242  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  24024243 atcgtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaacattttgtaacactttct 24024341  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024342 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 24024397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 31109399 - 31109654
Alignment:
Q  169 acttggatagcaaaggagggaacca-atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggtt 267  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  31109399 acttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggtt 31109498  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
    |||  |||||||||||| ||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  31109499 catagtgtgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagag-tcttgtaaccttttgtaacactttc 31109597  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31109598 tcatattggattggagagctgctctctcccctagattaggccatattggctgaactg 31109654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 19992544 - 19992327
Alignment:
Q  207 ctttgttgagagtgtctcttgggttggg-aaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaatc 305  Q
    ||||| || |||||| |||| ||||||| ||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||||||||||  ||    
T  19992544 ctttgatgtgagtgtttcttaggttggggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tc 19992446  T
Q  306 tagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatt 404  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19992445 tagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatt 19992347  T
Q  405 aggccatattggctgaactg 424  Q
    ||||||||||||||||||||    
T  19992346 aggccatattggctgaactg 19992327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 20357466 - 20357630
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | |||||||||||||||   |||| ||||||||||||||||||||  ||| ||||||||| ||||||    
T  20357466 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaaccctttgta 20357565  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20357566 acactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactg 20357630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 21812092 - 21812309
Alignment:
Q  207 ctttgttgagagtgtctcttgggttggg-aaaaatattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaat 304  Q
    ||||| ||||||||| |||| ||||||| ||||| |||||||||||||||| ||||| ||||||||  |||||||||||| ||| ||||||||||||| |    
T  21812092 ctttgatgagagtgtttcttaggttggggaaaaacattgtaatcaccttgggattat-gggttcatagtgtgagagtgggaaaataccaaagggtaga-t 21812189  T
Q  305 ctagggttagttcatgtgtaaagctt-ga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccaga 402  Q
    |||||||| ||||||||||||||||| || | |||||||| |||| |||||||||||| |||| | |||||||||||||| |||||||||||||||||||    
T  21812190 ctagggtttgttcatgtgtaaagctttgacaagctagagt-cttggaaccttttgtaagactt-cacatattggattggaaagctgctctctcccccaga 21812287  T
Q  403 ttaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||    
T  21812288 ttaggccacattggctgaactg 21812309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 2058144 - 2057979
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaa-gggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgt 358  Q
    |||||||||| ||||||||||||||||||| || | ||||||||||||||| | |||| ||||||| ||||||| ||||  ||| ||||||||| |||||    
T  2058144 tagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaatgctattgtttcttgtaaccctttgt 2058046  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058045 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 2057979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 12397334 - 12397225
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12397334 gataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttggggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttc 12397235  T
Q  115 ttgtgccttt 124  Q
    ||||||||||    
T  12397234 ttgtgccttt 12397225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 21639985 - 21639822
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  21639985 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 21639887  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21639886 cactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 21639822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 1533362 - 1533527
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttttgt 358  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||  | ||| | ||||||| ||||| | ||||  ||| ||||||||| |||||    
T  1533362 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgt 1533460  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1533461 aacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactg 1533527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 4873550 - 4873445
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873550 gataaggacttgtcttccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 4873451  T
Q  115 ttgtgc 120  Q
    ||||||    
T  4873450 ttgtgc 4873445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 18408940 - 18408777
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  | |||| ||||||| ||||| | | ||   ||||||||||| |||||||    
T  18408940 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagttatttttcttgtaaccctttgtaa 18408842  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18408841 cactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactg 18408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 12406686 - 12406591
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 110  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  12406686 gataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 12406591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 24266054 - 24266273
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  24266054 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 24266151  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  24266152 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 24266250  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  24266251 attaggccacattggctgaactg 24266273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 21646183 - 21646020
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| ||| |||    
T  21646183 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttttaa 21646085  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21646084 cactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactg 21646020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 4873397 - 4873310
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4873397 acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 31109242 - 31109347
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||  ||||||| |||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109242 gataaggacttgtctgccttggggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 31109341  T
Q  115 ttgtgc 120  Q
    ||||||    
T  31109342 ttgtgc 31109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 4866820 - 4866744
Alignment:
Q  348 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866820 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 4866744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 18413816 - 18413654
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||  | |||| ||||||| ||||| |  |||   ||||||||||| |||||||    
T  18413816 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaatctatttttcttgtaaccctttgtaa 18413718  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18413717 cactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactg 18413654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 20357321 - 20357408
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20357321 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 20357408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 24261175 - 24261394
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||  |||| |||||||||||  | |||||||||| ||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  24261175 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 24261272  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  24261273 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 24261371  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  24261372 attaggccacattggctgaactg 24261394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 1533218 - 1533305
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1533218 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 1533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 2058291 - 2058204
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2058291 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 2058204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 16880192 - 16880087
Alignment:
Q  319 tgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggc 417  Q
    |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16880192 tgtgtaaagcttgataagctaga-ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagattaggccacattggc 16880094  T
Q  418 tgaactg 424  Q
    |||||||    
T  16880093 tgaactg 16880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 16885048 - 16884943
Alignment:
Q  319 tgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggc 417  Q
    |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16885048 tgtgtaaagcttgataagctaga-ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagattaggccacattggc 16884950  T
Q  418 tgaactg 424  Q
    |||||||    
T  16884949 tgaactg 16884943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 24023990 - 24024093
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||  ||||||    
T  24023990 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatata--gtgttc 24024087  T
Q  115 ttgtgc 120  Q
    ||||||    
T  24024088 ttgtgc 24024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 2058404 - 2058330
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  2058404 gcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 2058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 16880489 - 16880384
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||| | | | ||||||||| ||  ||||||    
T  16880489 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttc 16880390  T
Q  115 ttgtgc 120  Q
    ||||||    
T  16880389 ttgtgc 16880384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 16885344 - 16885239
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||| | | | ||||||||| ||  ||||||    
T  16885344 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttc 16885245  T
Q  115 ttgtgc 120  Q
    ||||||    
T  16885244 ttgtgc 16885239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 20357231 - 20357284
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20357231 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 20357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 21811910 - 21812015
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| | | |||||||| || ||| ||||||  |||||||||||||||||||||  |||| | | ||||||||||||||||||||    
T  21811910 gataaggactggtcaacctggagaccgttgcagattgtgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttc 21812009  T
Q  115 ttgtgc 120  Q
    ||||||    
T  21812010 ttgtgc 21812015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 21983370 - 21983306
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21983370 ttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 21983306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 29159901 - 29159825
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  29159901 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgg 29159825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 44848684 - 44848758
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  44848684 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattg 44848758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 2647695 - 2647771
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||| ||||||||    
T  2647695 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgg 2647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 46516309 - 46516385
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  46516309 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgg 46516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 49091759 - 49091683
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||| ||||||||    
T  49091759 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattgg 49091683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 21640128 - 21640041
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||| ||||||| ||||||||    
T  21640128 acttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgg 21640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 1533106 - 1533177
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgt 118  Q
    ||||||||||||||||    |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  1533106 caaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 33332449 - 33332523
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt 414  Q
    |||||||||| |||||||||||||||| || || |||||||||| ||||||||||||||||||||||| ||||||    
T  33332449 ttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatatt 33332523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 24265848 - 24265953
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  24265848 gataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 24265947  T
Q  115 ttgtgc 120  Q
    ||||||    
T  24265948 ttgtgc 24265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 56045 - 55970
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||| ||||||||    
T  56045 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattgg 55970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 21646299 - 21646239
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||| |||||  ||||||||||||||||||| ||||||| ||||||||    
T  21646299 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgg 21646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 2580487 - 2580412
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| ||||||||    
T  2580487 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgg 2580412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 9190008 - 9190083
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| ||||||||    
T  9190008 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgg 9190083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 20284186 - 20284111
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| ||||||||    
T  20284186 ttcttgtaacgcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattgg 20284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 35960901 - 35960839
Alignment:
Q  354 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||| |||||||    
T  35960901 tttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattg 35960839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 18409072 - 18408995
Alignment:
Q  179 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||    
T  18409072 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgg 18408995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 21640220 - 21640167
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||| ||||||| ||||||| | |||||||||||||||||||||||||||    
T  21640220 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgc 21640167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 24260992 - 24261097
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| |  || |||||| |||||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  24260992 gataaggactggtcaacttgaggaccgttgaaaatcgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttc 24261091  T
Q  115 ttgtgc 120  Q
    ||||||    
T  24261092 ttgtgc 24261097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 24789628 - 24789702
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    ||||||| ||||||||||   |||||||||| ||||||| |||||||||||| ||||||||||  ||||||||||||    
T  24789628 gcaaatcttgacacgattt--ggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 24789702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 18413958 - 18413871
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||| | ||||| ||||||||    
T  18413958 acttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacaccttgg 18413871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 28617258 - 28617300
Alignment:
Q  374 tggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattgg 28617300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 1562386 - 1562312
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    ||||||||||||||||||| || |||||||| |||||||    ||||||||||||||||| || |||||||||||||    
T  1562386 gcaaatcgtgacacgattg-ggaaaatcgtgacacgattggaacagaggaagactagtattta-tgtgttcttgtgc 1562312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 4796666 - 4796742
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| ||||||||||| |||| ||||| |||||| ||| |||||| |||||||||||||||| ||| ||||    
T  4796666 ttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttgg 4796742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 2479421 - 2479360
Alignment:
Q  354 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||||||| ||||| |||||| ||||||||||||| |||| |||||||| |||||||    
T  2479421 tttgtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcatattg 2479360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 9185178 - 9185240
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||| || || |||||||||||||| |||||||||||||| ||||  |||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattgg 9185240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 25767438 - 25767400
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  25767438 caaatcgtgacacgattttgggaaatcgtgacacgattt 25767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 43504613 - 43504575
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  43504613 caaatcgtgacacgatcgtgggaaatcgtgacacgattt 43504575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 4178461 - 4178497
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  4178461 aatcgtgacacgattttgggaaatcgtgacacgattt 4178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 47263757 - 47263700
Alignment:
Q  358 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||| |||||| ||||||||    
T  47263757 taacactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattgg 47263700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 51520726 - 51520471
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  51520726 acttggatagaaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttc 51520627  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520626 atattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 51520527  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  51520526 catattggattggagagctgctctctcccccagattaggccatattggcagaactg 51520471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 9224223 - 9224478
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| || ||||||||    
T  9224223 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttc 9224322  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9224323 atagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttct 9224422  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224423 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 9224478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 9229010 - 9229265
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| || ||||||||    
T  9229010 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttc 9229109  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9229110 atagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttct 9229209  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9229210 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 9229265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 45347658 - 45347888
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||||||||||| |||||||||||| ||||||||||||||||  | ||||||||||  |||||||||||| ||| ||||    
T  45347658 atggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45347757  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 393  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347758 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagaggtcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 45347857  T
Q  394 tcccccagattaggccatattggctgaactg 424  Q
    |||||||||||| ||||||||||||||||||    
T  45347858 tcccccagattaagccatattggctgaactg 45347888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 3814291 - 3814038
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||| | ||||||||||| || ||||| || ||||||||| ||||||||| |||| |||||||||||| |||||||||||||||| || ||||||||    
T  3814291 acttggacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggttttagggttc 3814192  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  3814191 atagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttca 3814094  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814093 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 3814038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 45357138 - 45357367
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | ||||||||||  |||||||||||| ||| ||||    
T  45357138 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45357237  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 393  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357238 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 45357336  T
Q  394 tcccccagattaggccatattggctgaactg 424  Q
    |||||||||||| ||||||||||||||||||    
T  45357337 tcccccagattatgccatattggctgaactg 45357367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 169 - 424
Target Start/End: Complemental strand, 5732932 - 5732679
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg-attatagggtt 267  Q
    ||||||| | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| |||||||||||| |||||||||||||||| |||| ||||||    
T  5732932 acttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatta-agggtt 5732834  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
     ||  |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5732833 tatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttc 5732736  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5732735 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 5732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 24742118 - 24741954
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  24742118 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 24742020  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742019 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 24741954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 18855956 - 18855741
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaatc 305  Q
    ||||| |||||| || |||| |||||||||||| |||||||||||||||| ||| | ||||||||  |||||||||||| ||| ||||||||||||  ||    
T  18855956 ctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattgt-gggttcatagtgtgagagtgggaaaataccaaagggtagt-tc 18855859  T
Q  306 tagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatt 404  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18855858 tagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagatt 18855761  T
Q  405 aggccatattggctgaactg 424  Q
    ||||||||||||||||||||    
T  18855760 aggccatattggctgaactg 18855741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 306 - 424
Target Start/End: Original strand, 56146664 - 56146782
Alignment:
Q  306 tagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 405  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 56146763  T
Q  406 ggccatattggctgaactg 424  Q
    |||||||||||||||||||    
T  56146764 ggccatattggctgaactg 56146782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 29760820 - 29760655
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttttgt 358  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||  | ||| | ||||||| ||||| ||||||  ||| ||||||||| |||||    
T  29760820 tagggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaggctattgtttcttgtaaccctttgt 29760722  T
Q  359 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29760721 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 29760655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 9228857 - 9228962
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228857 gataaggacttgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 9228956  T
Q  115 ttgtgc 120  Q
    ||||||    
T  9228957 ttgtgc 9228962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 56141683 - 56141788
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||| |||||||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56141683 gataaggactggtctaccttgggtcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 56141782  T
Q  115 ttgtgc 120  Q
    ||||||    
T  56141783 ttgtgc 56141788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 18712582 - 18712669
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18712582 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgg 18712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 9224070 - 9224171
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9224070 gataaggacttgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttc 9224169  T
Q  115 tt 116  Q
    ||    
T  9224170 tt 9224171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 18712426 - 18712531
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||   || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18712426 gataaggacttgtcaaccttgggtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 18712525  T
Q  115 ttgtgc 120  Q
    ||||||    
T  18712526 ttgtgc 18712531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 5733075 - 5732971
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5733075 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttc 5732976  T
Q  115 ttgtg 119  Q
    |||||    
T  5732975 ttgtg 5732971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 24742263 - 24742176
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  24742263 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 24742176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 18856138 - 18856033
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||  |||||||| ||||||||| |||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18856138 gataaggactggtcaacctgggaaccgttgcagatcgtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 18856039  T
Q  115 ttgtgc 120  Q
    ||||||    
T  18856038 ttgtgc 18856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 45347488 - 45347593
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||  |||||||| |||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  45347488 gataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttc 45347587  T
Q  115 ttgtgc 120  Q
    ||||||    
T  45347588 ttgtgc 45347593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 51520879 - 51520775
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||  || |||||||||| |  |||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  51520879 gataaggactgatctaccttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttc 51520781  T
Q  115 ttgtgc 120  Q
    ||||||    
T  51520780 ttgtgc 51520775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 29760964 - 29760876
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga-aaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  29760964 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcaccttgg 29760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 3814435 - 3814330
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||||||||  |  |||||||| ||||||||| |||   ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3814435 gataaggactggtcaacctgagaaccgttgcagatcgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttc 3814336  T
Q  115 ttgtgc 120  Q
    ||||||    
T  3814335 ttgtgc 3814330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 45356969 - 45357074
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||  |||||||| |||||||||||||   ||||||||||| |||||||||||| | ||| ||||||||||||||||||||    
T  45356969 gataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttc 45357068  T
Q  115 ttgtgc 120  Q
    ||||||    
T  45357069 ttgtgc 45357074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 29761055 - 29761002
Alignment:
Q  67 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 29761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 416
Target Start/End: Original strand, 31985555 - 31985708
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||  ||||||||||||| |||||| || ||||||||  ||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  31985555 tagggttcacattgtgagagtggg-aaacacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 31985652  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  31985653 cactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattgg 31985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 24742357 - 24742302
Alignment:
Q  65 ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24742357 ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 24742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 36315229 - 36315304
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36315229 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36315304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 36329438 - 36329513
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36329438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 424
Target Start/End: Original strand, 28468542 - 28468612
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactg 28468612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 10047477 - 10047401
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  10047477 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 10047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 39246092 - 39246016
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  39246092 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 39246016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 16623292 - 16623367
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  16623292 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattg 16623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 5143345 - 5143281
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  5143345 ttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattgg 5143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 5396671 - 5396746
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  5396671 ttcttgtaactctttgcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 5396746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 5269204 - 5269266
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 5269266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 24333896 - 24333831
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  24333896 cttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 24333831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 38152449 - 38152514
Alignment:
Q  352 cttttgtaacactttctc-atattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  38152449 cttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattgg 38152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 3796518 - 3796594
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||||| |||||||||||||| |||||| ||||||||    
T  3796518 ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattgg 3796594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 16630679 - 16630755
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||| | ||||||||    
T  16630679 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattgg 16630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 28468315 - 28468402
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||| ||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||    
T  28468315 acttggattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgg 28468402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 6743425 - 6743490
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||| ||||||||    
T  6743425 cttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattgg 6743490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 5147763 - 5147699
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||| |||||| ||||||||    
T  5147763 ttttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattgg 5147699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 3777646 - 3777571
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||  |||||||    
T  3777646 ttcttgtaactctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattgg 3777571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 31495794 - 31495756
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31495794 caaatcgtgacacgattgtgggaaatcgtgacacgattt 31495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 8393187 - 8393256
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||| |  ||||||||||||    
T  8393187 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaaggctagtataaa--gtgttcttgtgc 8393256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 8395396 - 8395465
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||| |  ||||||||||||    
T  8395396 atcgtgacacgatt-tgggaaatcgtgacacgatttcaacagaggaaggctagtataaa--gtgttcttgtgc 8395465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 28468458 - 28468506
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagg 309  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||    
T  28468458 tagggttcatattgagagagtggggaaacacaaatgggtagaatctagg 28468506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 39774304 - 39774380
Alignment:
Q  342 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||| |||||| ||||||| |  || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  39774304 ttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 7122372 - 7122410
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  7122372 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 7122410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 7124594 - 7124632
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  7124594 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 7124632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 13992771 - 13992733
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  13992771 caaatcgtgacacgattttgggaaatcgtgacacgattt 13992733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 5370557 - 5370521
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  5370557 aatcgtgacacgattttgggaaatcgtgacacgattt 5370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 34878 - 35133
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| || ||||||||    
T  34878 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttc 34977  T
Q  269 atgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttct 368  Q
    ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34978 atagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttct 35077  T
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35078 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 35133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 34725 - 34826
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34725 gataaggacttgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttc 34824  T
Q  115 tt 116  Q
    ||    
T  34825 tt 34826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 169 - 420
Target Start/End: Complemental strand, 41398505 - 41398254
Alignment:
Q  169 acttggatagcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggtt 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  41398505 acttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggtt 41398406  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
    |||  |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41398405 catagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttc 41398307  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctga 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398306 tcatattggattggagagctgctctctcccccagattaggccatattggctga 41398254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 169 - 420
Target Start/End: Complemental strand, 41390850 - 41390599
Alignment:
Q  169 acttggatagcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggtt 267  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  41390850 acttggatagcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggtt 41390751  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
    |||  |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41390750 catagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttc 41390652  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctga 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390651 tcatattggattggagagctgctctctcccccagattaggccatattggctga 41390599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 25444931 - 25445160
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | ||||||||||  |||||||||||| ||| ||||    
T  25444931 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25445030  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25445031 aagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctct 25445128  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  25445129 ctcccccagattaggccatattggctgaactg 25445160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 194 - 424
Target Start/End: Complemental strand, 39445742 - 39445514
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  39445742 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39445643  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39445642 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 39445546  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  39445545 ctcccccagattaggccatattggctgaactg 39445514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 44023716 - 44023944
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  44023716 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 44023815  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  44023816 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 44023912  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  44023913 ctcccccagattaggccatattggctgaactg 44023944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 24787283 - 24787447
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| || |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  24787283 tagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaaccctttgta 24787382  T
Q  360 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24787383 acactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactg 24787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 194 - 424
Target Start/End: Original strand, 1054854 - 1055082
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  1054854 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 1054953  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  1054954 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagttgctct 1055050  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  1055051 ctcccccagattaggccatattggctgaactg 1055082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 24202689 - 24202852
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  24202689 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24202787  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24202788 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 24202852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 43988314 - 43988535
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| |||  ||||||||||||     
T  43988314 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggatgggaaaatgccaaagggtaga- 43988411  T
Q  304 tctagggttagtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccc 399  Q
    |||||||||  ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43988412 tctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccc 43988510  T
Q  400 agattaggccatattggctgaactg 424  Q
    ||||||||||| |||||||||||||    
T  43988511 agattaggccacattggctgaactg 43988535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 19358763 - 19358926
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  19358763 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 19358861  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19358862 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19358926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 41391015 - 41390910
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||||||| |||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41391015 gataaggactggtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 41390916  T
Q  115 ttgtgc 120  Q
    ||||||    
T  41390915 ttgtgc 41390910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 41398670 - 41398565
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||||||| |||| |||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41398670 gataaggactggtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttc 41398571  T
Q  115 ttgtgc 120  Q
    ||||||    
T  41398570 ttgtgc 41398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 19361352 - 19361515
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| |  |||   ||||||||||| |||||||    
T  19361352 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 19361450  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19361451 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19361515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 19379992 - 19380155
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| |  |||   ||||||||||| |||||||    
T  19379992 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 19380090  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19380091 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19380155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 24787138 - 24787225
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  24787138 acttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattataatcaccttgg 24787225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 25444763 - 25444868
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  25444763 gataaggactggtcaacctagggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttc 25444862  T
Q  115 ttgtgc 120  Q
    ||||||    
T  25444863 ttgtgc 25444868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 39445911 - 39445806
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  39445911 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttc 39445812  T
Q  115 ttgtgc 120  Q
    ||||||    
T  39445811 ttgtgc 39445806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 44023548 - 44023653
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  44023548 gataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttc 44023647  T
Q  115 ttgtgc 120  Q
    ||||||    
T  44023648 ttgtgc 44023653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 194 - 332
Target Start/End: Original strand, 25439738 - 25439875
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | ||||||||||  |||||||||||| ||| ||||    
T  25439738 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25439837  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga 332  Q
    ||||||||  ||||||||| |||||||||||||||||||    
T  25439838 aagggtag-ctctagggtttgttcatgtgtaaagcttga 25439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 1054685 - 1054790
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||  |||||||| |||||||||||||   ||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  1054685 gataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttc 1054784  T
Q  115 ttgtgc 120  Q
    ||||||    
T  1054785 ttgtgc 1054790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 25439570 - 25439675
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| | |||||| |||||||||||||   |||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  25439570 gataaggactggtcaacctggggactgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttc 25439669  T
Q  115 ttgtgc 120  Q
    ||||||    
T  25439670 ttgtgc 25439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 24786996 - 24787100
Alignment:
Q  15 gataaggacttgtcaa-ccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| ||||| ||||||||| |  |||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24786996 gataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtt 24787093  T
Q  114 cttgtgc 120  Q
    |||||||    
T  24787094 cttgtgc 24787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 24793818 - 24793921
Alignment:
Q  15 gataaggacttgtcaa-ccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| ||||| ||||||||| |  |||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24793818 gataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtt 24793915  T
Q  114 cttgtg 119  Q
    ||||||    
T  24793916 cttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 24202546 - 24202633
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  24202546 acttggattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 24202633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 26644897 - 26644972
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26644897 ttcttgtaactctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattgg 26644972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 47703946 - 47704011
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 47704011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 16124515 - 16124591
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  16124515 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 16124591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 19073026 - 19072950
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||    
T  19073026 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattgg 19072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 19120916 - 19120840
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||    
T  19120916 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattgg 19120840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 27104371 - 27104447
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  27104371 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattgg 27104447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 3281805 - 3281730
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  3281805 ttcttgtaactctttgtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattgg 3281730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 29651898 - 29651833
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  29651898 cttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattgg 29651833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 43988120 - 43988225
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||| ||    
T  43988120 gataaggactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctc 43988219  T
Q  115 ttgtgc 120  Q
    ||||||    
T  43988220 ttgtgc 43988225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 19366085 - 19366172
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||    
T  19366085 acttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgg 19366172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 13604623 - 13604697
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  13604623 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 13604697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 21536569 - 21536635
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattagg 407  Q
    ||||||||||  |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  21536569 ttcttgtaactctttgtaacactttcattatagtggattggagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 775759 - 775694
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||||||||| ||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattgg 775694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 9476348 - 9476283
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  9476348 cttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgg 9476283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 13598485 - 13598420
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  13598485 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgg 13598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 37069864 - 37069792
Alignment:
Q  345 ttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||  |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||| ||||||||    
T  37069864 ttgtaactctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattgg 37069792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 32889536 - 32889461
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  32889536 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattgg 32889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 47098824 - 47098899
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||||||||||||||||||| || ||||||||    
T  47098824 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattgg 47098899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 9036208 - 9036277
Alignment:
Q  48 atcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    ||||||||||||||| || |||||||| |||||||||  |||||||||||||||||| |  ||||||||||||    
T  9036208 atcgtgacacgattg-ggaaaatcgtgacacgatttcaacagaggaagactagtataaa--gtgttcttgtgc 9036277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 20622713 - 20622676
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    |||||||||||||||||||||||||||||| |||||||    
T  20622713 caaatcgtgacacgattgtgggaaatcgtgacacgatt 20622676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 21053647 - 21053684
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    |||||||||||||||||||||||||||||| |||||||    
T  21053647 caaatcgtgacacgattgtgggaaatcgtgacacgatt 21053684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 19366228 - 19366276
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagg 309  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||    
T  19366228 tagggttcatattgagagagtggggaaacacaaatgggtagaatctagg 19366276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 20622619 - 20622544
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||| || |||| ||| |||||||| ||| ||| |||||||||||| ||||||||||  ||||||||||||    
T  20622619 gcaaatcgtggcatgatt-tggaaaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgc 20622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 9986893 - 9986931
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  9986893 caaatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 19361220 - 19361296
Alignment:
Q  179 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    |||||||||||||    ||||||||||||||||| | |||  |||||||||||||| |||| ||||||| ||||||||    
T  19361220 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg-aaaacattgtaaacaccttgg 19361296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 40282066 - 40282103
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgatt 82  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  40282066 caaatcgtgacacgattgtggtaaatcgtgacacgatt 40282103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 20762358 - 20762394
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  20762358 aatcgtgacacgattttgggaaatcgtgacacgattt 20762394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-109; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 169 - 424
Target Start/End: Original strand, 39811804 - 39812059
Alignment:
Q  169 acttggatagcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggtt 267  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| || |||||||    
T  39811804 acttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggttttagggtt 39811903  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc 367  Q
    |||  |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39811904 catagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttc 39812002  T
Q  368 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39812003 tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 39812059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 194 - 422
Target Start/End: Complemental strand, 32247031 - 32246804
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||| ||||||||||||||||  | ||||||||||  |||||||||||| ||| ||||    
T  32247031 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 32246932  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 393  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32246931 aagggtataatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 32246833  T
Q  394 tcccccagattaggccatattggctgaac 422  Q
    |||||||||||||||||||||||||||||    
T  32246832 tcccccagattaggccatattggctgaac 32246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 292 - 424
Target Start/End: Original strand, 44312563 - 44312695
Alignment:
Q  292 caaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 391  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 44312662  T
Q  392 tctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||    
T  44312663 tctcccccagattaggccatattggctgaactg 44312695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 11098846 - 11099010
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| | ||||  ||| ||||||||| ||||||    
T  11098846 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgta 11098944  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098945 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 11099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 14291666 - 14291502
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||||| | |||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  14291666 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 14291568  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291567 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 14291502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 19344655 - 19344435
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaata---ttgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtaga 302  Q
    ||||| ||||||||| |||| |||||||||||| |   ||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||     
T  19344655 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg 19344557  T
Q  303 atctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 400  Q
     ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| |    
T  19344556 -tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccta 19344459  T
Q  401 gattaggccatattggctgaactg 424  Q
    |||||||||| |||||||||||||    
T  19344458 gattaggccacattggctgaactg 19344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 19349513 - 19349293
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaaata---ttgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtaga 302  Q
    ||||| ||||||||| |||| |||||||||||| |   ||||||||||||||| ||||| ||||||||  |||||| ||||| ||| ||||||||||||     
T  19349513 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgagggtgggaaaataccaaagggtagg 19349415  T
Q  303 atctagggttagttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 400  Q
     ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| |    
T  19349414 -tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccta 19349317  T
Q  401 gattaggccatattggctgaactg 424  Q
    |||||||||| |||||||||||||    
T  19349316 gattaggccacattggctgaactg 19349293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 9296320 - 9296484
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 359  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||||| | |||| ||| ||| ||||||||||||  ||| ||||||||| ||||||    
T  9296320 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtataa-gcttgaaggctattgtttcttgtaaccctttgta 9296418  T
Q  360 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9296419 acactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactg 9296484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 3491927 - 3491764
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  3491927 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 3491829  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3491828 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 3491764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 25398672 - 25398509
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||| ||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  25398672 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25398574  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25398573 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactg 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 25403810 - 25403647
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||| ||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  25403810 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25403712  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25403711 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactg 25403647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 39811648 - 39811753
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||||||||||||  ||||||| |||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811648 gataaggacttgtctgccttggggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 39811747  T
Q  115 ttgtgc 120  Q
    ||||||    
T  39811748 ttgtgc 39811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 32247202 - 32247093
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||| |||| |||||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32247202 gataaagactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttc 32247103  T
Q  115 ttgtgccttt 124  Q
    ||||||||||    
T  32247102 ttgtgccttt 32247093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 11098701 - 11098788
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11098701 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 11098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 407
Target Start/End: Complemental strand, 25407799 - 25407653
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||| ||||||| || |||||||| |||||  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  25407799 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25407701  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattagg 407  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  25407700 cactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 9296176 - 9296263
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||    
T  9296176 acttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcaccttgg 9296263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 14291811 - 14291724
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  14291811 acttggattacaaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcaccttgg 14291724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 14291924 - 14291850
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291924 gcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 14291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 11098588 - 11098662
Alignment:
Q  44 gcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 120  Q
    |||||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11098588 gcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgc 11098662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 13569426 - 13569350
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13569426 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 13569350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 8040147 - 8040073
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8040147 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactg 8040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 19344838 - 19344733
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| ||| |||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  19344838 gataaggactggtcaacctggggaccgttgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 19344739  T
Q  115 ttgtgc 120  Q
    ||||||    
T  19344738 ttgtgc 19344733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 19349696 - 19349591
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| ||||||||  || |||||||| |||||||||||||   |||||||||||||||||||||||||| | | ||||||||| ||  ||||||    
T  19349696 gataaggactggtcaacctgaggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttc 19349597  T
Q  115 ttgtgc 120  Q
    ||||||    
T  19349596 ttgtgc 19349591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 10445443 - 10445519
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10445443 ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattgg 10445519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 34388956 - 34388880
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  34388956 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattgg 34388880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 28259177 - 28259252
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  28259177 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 28259252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 40738926 - 40738857
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactg 40738857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 21630041 - 21629957
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  21630041 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactg 21629957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 20522318 - 20522242
Alignment:
Q  342 ttcttgtaacc-ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  20522318 ttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattgg 20522242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 34682333 - 34682409
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  34682333 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattgg 34682409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 414
Target Start/End: Complemental strand, 17865301 - 17865227
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt 414  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  17865301 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatatt 17865227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 8390149 - 8390225
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| ||||    
T  8390149 ttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttgg 8390225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 10707251 - 10707327
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| || ||||||||||| |||||| ||||||||    
T  10707251 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgg 10707327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 14699007 - 14699082
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  14699007 ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 14699082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 25409922 - 25409862
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||| |||||  ||||||||||||||||||| ||||||| ||||||||    
T  25409922 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgg 25409862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 31056131 - 31056067
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||||||||| || || ||||||||||||||||||||||||| |||||||| |||||||    
T  31056131 cttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattg 31056067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 9296033 - 9296137
Alignment:
Q  15 gataaggacttgtca-accttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgtt 113  Q
    |||||||||| |||| |||||||||| |  |||||||||||||||||    | |||||||| ||||||| |||||||||||||||||||| ||  |||||    
T  9296033 gataaggactggtcataccttgggtcggacgcaaatcgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgtt 9296130  T
Q  114 cttgtgc 120  Q
    |||||||    
T  9296131 cttgtgc 9296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 42039669 - 42039744
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  || ||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| ||||||||    
T  42039669 ttcttgtaactcttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattgg 42039744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 33118222 - 33118158
Alignment:
Q  353 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||| ||||| ||||| |||||||||| |||||||||||||||| |||||| ||||||||    
T  33118222 ttttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattgg 33118158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 39483029 - 39482953
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||  ||||||||||||||| |||||| ||||||||    
T  39483029 ttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattgg 39482953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 23078470 - 23078545
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  ||| |||||||||| ||||| |||||||||||| || ||||||||||| |||||| ||||||||    
T  23078470 ttcttgtaactctttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgg 23078545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 6266382 - 6266420
Alignment:
Q  45 caaatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  6266382 caaatcgtgacacgattgtgggaaatcgtgacacgattt 6266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 16940219 - 16940284
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | ||||||||    
T  16940219 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattgg 16940284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 17010884 - 17010949
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | ||||||||    
T  17010884 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattgg 17010949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 39483222 - 39483164
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  39483222 gggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgg 39483164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 3492043 - 3491983
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||||||||||| | |||  ||||||||||||| ||||| ||||||| ||||||||    
T  3492043 gggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttgg 3491983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 33528620 - 33528696
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| ||||||||    
T  33528620 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattgg 33528696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 27149306 - 27149369
Alignment:
Q  354 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  27149306 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 36757774 - 36757837
Alignment:
Q  354 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||| ||||||||| ||||| ||||||||||||||| | || ||||||||||||| ||||||||    
T  36757774 tttgaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattgg 36757837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 12647862 - 12647824
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  12647862 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 12647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 40739009 - 40738963
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatcta 307  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||    
T  40739009 tagggttcatattgtgagagtggggaaacacaaatgggtagaaacta 40738963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 2869692 - 2869768
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| | |||||| ||||||| || || |||||||||||||| |||||||||| ||| |||| ||||||||    
T  2869692 ttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattgg 2869768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 20522511 - 20522471
Alignment:
Q  196 gggttgagtgtctttgttgagagtgtctcttgggttgggaa 236  Q
    ||||||||||||||||| | |||| ||||||||||||||||    
T  20522511 gggttgagtgtctttgtagtgagtatctcttgggttgggaa 20522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 40739150 - 40739082
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 237  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  |||||||||||||||||    
T  40739150 acttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 40739082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 150; Significance: 4e-79; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 223 - 424
Target Start/End: Original strand, 9514 - 9713
Alignment:
Q  223 tcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtg 322  Q
    |||| |||||||||||| |||||||||||||||| || ||||||||||  |||||||||||| ||| ||||||||||||| ||||||||| |||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtg 9612  T
Q  323 taaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaac 422  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9613 taaagcttgaaggctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaac 9711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 3664 - 3845
Alignment:
Q  169 acttggatagcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggtt 267  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| || |||||||    
T  3664 acttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggttttagggtt 3763  T
Q  268 catgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaac 351  Q
    |||  |||||||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3764 catagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 3508 - 3613
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||| ||| |||||||| |||||||||||||   || |||||||| |||||||||||||| |||||||||||||||||||| |||    
T  3508 gataaggactagtcaacctggggaccgttgcagatcgtgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattc 3607  T
Q  115 ttgtgc 120  Q
    ||||||    
T  3608 ttgtgc 3613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 194 - 424
Target Start/End: Complemental strand, 605 - 377
Alignment:
Q  194 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttggattatagggttcatgttgtgagagtggggaaacacca 293  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||| ||||||||||||||||  | | ||||||||  |||||||||||| ||| ||||    
T  605 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 506  T
Q  294 aagggtagaatctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 392  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  505 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 409  T
Q  393 ctcccccagattaggccatattggctgaactg 424  Q
    ||||||||||||||||||||||||||||||||    
T  408 ctcccccagattaggccatattggctgaactg 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 774 - 669
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| |||| ||||||||| |||||||||||||   ||||||||||| |||||||||||||| ||| |||| |||||||||||||||    
T  774 gataaggactggtcaactttggttccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttc 675  T
Q  115 ttgtgc 120  Q
    ||||||    
T  674 ttgtgc 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 17872 - 18035
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| ||| |  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  17872 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 17970  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17971 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 18035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 424
Target Start/End: Original strand, 23965 - 24128
Alignment:
Q  261 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggttagttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 360  Q
    |||||||||| |||||||||||||||||||| || |||||||| ||| |  | |||| ||||||| ||||| | ||||   ||||||||||| |||||||    
T  23965 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24063  T
Q  361 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24064 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 24128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 17729 - 17816
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||    
T  17729 acttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgg 17816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 23822 - 23909
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgg 256  Q
    ||||||||  |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||    
T  23822 acttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgg 23909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 84; Significance: 9e-40; HSPs: 4)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 14161 - 14380
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  ||||||||||||      
T  14161 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtagg- 14258  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  14259 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 14357  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  14358 attaggccacattggctgaactg 14380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 19017 - 19236
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgga-ttatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | ||||||||||||||||| |||| ||||||||  ||||||  |||| ||  |||||||||||||     
T  19017 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggaattat-gggttcatagtgtgaggttgggaaattaccaaagggtaga- 19114  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||||||||   || |||||||||||||| | |||||| |||||||||| ||||||||||||  || ||||||| |||||||||||||||||||||||||    
T  19115 tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacactcacatattgtattggagagctgctctctcccccag 19213  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| | |||||||||||    
T  19214 attaggccacaatggctgaactg 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 13955 - 14060
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| | ||| |||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  13955 gataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 14054  T
Q  115 ttgtgc 120  Q
    ||||||    
T  14055 ttgtgc 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 18835 - 18940
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    ||||| |||| |||| ||| ||| ||||||||||||||||||||||    ||||||||||||||||||||||||| | | ||||| ||| ||  ||||||    
T  18835 gataaagactggtcatcctggggaccgttgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttc 18934  T
Q  115 ttgtgc 120  Q
    ||||||    
T  18935 ttgtgc 18940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 2103 - 2322
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  |||||||||||||     
T  2103 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtaga- 2200  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||| ||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  2201 tctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccag 2299  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  2300 attaggccacattggctgaactg 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 1910 - 2015
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||   ||||||||||| |||||||||||||| | | ||||||||||||  ||||||    
T  1910 gataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttc 2009  T
Q  115 ttgtgc 120  Q
    ||||||    
T  2010 ttgtgc 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 148808 - 149027
Alignment:
Q  207 ctttgttgagagtgtctcttgggttgggaaaa--atattgtaatcaccttgg-attatagggttcatgttgtgagagtggggaaacaccaaagggtagaa 303  Q
    ||||| ||||||||| |||| |||||||||||  | |||||||||||||||| ||||| ||||||||  ||||||  |||| ||  |||||||||||||     
T  148808 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattat-gggttcatagtgtgaggttgggaaattaccaaagggtaga- 148905  T
Q  304 tctagggttagttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 401  Q
    |||| ||||   || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  148906 tctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccag 149004  T
Q  402 attaggccatattggctgaactg 424  Q
    ||||||||| |||||||||||||    
T  149005 attaggccacattggctgaactg 149027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 148615 - 148720
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||   ||||||||||| |||||||||||||| | | ||||||||||||  ||||||    
T  148615 gataaggactggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttc 148714  T
Q  115 ttgtgc 120  Q
    ||||||    
T  148715 ttgtgc 148720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 8419 - 8494
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8419 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 8198 - 8266
Alignment:
Q  169 acttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 237  Q
    ||||||||  |||||||||||||    ||||||||||||||||| | |||  |||||||||||||||||    
T  8198 acttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaa 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 181980 - 182035
Alignment:
Q  369 catattggattggagagctgctctctcccccagattaggccatattggctgaactg 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  181980 catattggattggagagctgctctctcccccagattaggccacattggctgaactg 182035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 176621 - 176726
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgcaaatcgtgacacgattgtgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttc 114  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||   | ||||||||| ||  ||||||    
T  176621 gataaggactggtcaactttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttc 176720  T
Q  115 ttgtgc 120  Q
    ||||||    
T  176721 ttgtgc 176726  T

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Target: scaffold0148 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 10827 - 10751
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||| |||||| ||||||||    
T  10827 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattgg 10751  T

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Target: scaffold0036 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 85780 - 85696
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 424  Q
    ||||||||||  |||||||||||||| ||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  85780 ttcttgtaactctttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactg 85696  T

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Target: scaffold0087 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 43961 - 44036
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||  ||||||||    
T  43961 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattgg 44036  T

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Target: scaffold0087; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 36832 - 36907
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    ||||||||||  |||||||||||||| ||||| ||| |||| |||||||||||| ||| |||||||| ||||||||    
T  36832 ttcttgtaactctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattgg 36907  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 133280 - 133354
Alignment:
Q  342 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  133280 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 133354  T

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Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 2579 - 2514
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||    
T  2579 cttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattgg 2514  T

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Target: scaffold0006; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 5770 - 5705
Alignment:
Q  352 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 416  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  5770 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgg 5705  T

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Target: scaffold0098 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 45337 - 45276
Alignment:
Q  355 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattg 45276  T

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Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 17361 - 17286
Alignment:
Q  342 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 415  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| |||||||    
T  17361 ttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattg 17286  T

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Target: scaffold0674 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 4205 - 4167
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  4205 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 4167  T

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Target: scaffold0665 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 8121 - 8091
Alignment:
Q  15 gataaggacttgtcaaccttgggtccgttgc 45  Q
    |||||||||||||||||||||||||||||||    
T  8121 gataaggacttgtcaaccttgggtccgttgc 8091  T

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Target: scaffold0565 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 3080 - 3042
Alignment:
Q  43 tgcaaatcgtgacacgattgtgggaaatcgtggcacgat 81  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  3080 tgcaaatcgtggcacgattgtgggaaatcgtgacacgat 3042  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 407
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  374 tggattggagagctgctctctcccccagattagg 407  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 80982 - 80946
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  80982 aatcgtgacacgattttgggaaaacgtggcacgattt 80946  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 434218 - 434254
Alignment:
Q  47 aatcgtgacacgattgtgggaaatcgtggcacgattt 83  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  434218 aatcgtgacacgattttgggaaatcgtgacacgattt 434254  T

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