View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9220_low_31 (Length: 463)

Name: NF9220_low_31
Description: NF9220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9220_low_31
NF9220_low_31
[»] chr3 (58 HSPs)
chr3 (175-451)||(3850266-3850555)
chr3 (184-315)||(23457988-23458126)
chr3 (173-267)||(3849029-3849123)
chr3 (173-267)||(33689380-33689473)
chr3 (174-267)||(40758446-40758539)
chr3 (175-267)||(36418024-36418116)
chr3 (168-267)||(41558218-41558316)
chr3 (181-267)||(26463638-26463724)
chr3 (174-262)||(1079562-1079650)
chr3 (184-267)||(36417697-36417780)
chr3 (176-267)||(53757059-53757150)
chr3 (174-263)||(9367740-9367829)
chr3 (174-267)||(19740922-19741015)
chr3 (182-296)||(40033526-40033634)
chr3 (181-263)||(42343071-42343153)
chr3 (181-267)||(43384619-43384705)
chr3 (181-267)||(46475117-46475202)
chr3 (174-244)||(47856386-47856456)
chr3 (176-249)||(35712045-35712118)
chr3 (175-232)||(40758147-40758204)
chr3 (177-250)||(43607782-43607855)
chr3 (178-250)||(9368654-9368726)
chr3 (174-249)||(23458333-23458408)
chr3 (174-248)||(41558007-41558081)
chr3 (174-232)||(42342790-42342848)
chr3 (173-251)||(53856409-53856487)
chr3 (175-227)||(9294334-9294386)
chr3 (172-232)||(19741263-19741323)
chr3 (176-232)||(23276354-23276410)
chr3 (173-236)||(2796464-2796527)
chr3 (174-249)||(33689733-33689808)
chr3 (175-238)||(34142583-34142646)
chr3 (181-244)||(36150533-36150596)
chr3 (174-225)||(40033834-40033885)
chr3 (181-253)||(21783406-21783476)
chr3 (198-286)||(42855615-42855710)
chr3 (174-238)||(1078536-1078600)
chr3 (174-250)||(21186048-21186124)
chr3 (176-232)||(25108466-25108522)
chr3 (178-262)||(32431533-32431617)
chr3 (174-249)||(2796178-2796253)
chr3 (174-245)||(51993963-51994034)
chr3 (168-226)||(25107206-25107264)
chr3 (393-431)||(47856571-47856609)
chr3 (393-431)||(47857451-47857489)
chr3 (181-226)||(9292249-9292294)
chr3 (173-226)||(26463963-26464016)
chr3 (181-226)||(46474821-46474866)
chr3 (181-238)||(53756750-53756807)
chr3 (176-232)||(51994257-51994313)
chr3 (175-227)||(53856015-53856067)
chr3 (174-225)||(23272823-23272874)
chr3 (175-308)||(47857533-47857673)
chr3 (199-248)||(21783850-21783899)
chr3 (183-244)||(33154885-33154946)
chr3 (178-250)||(6956251-6956323)
chr3 (175-235)||(44654871-44654931)
chr3 (181-249)||(55052298-55052366)
[»] chr8 (63 HSPs)
chr8 (80-174)||(33888767-33888861)
chr8 (173-267)||(8316651-8316745)
chr8 (174-315)||(13186340-13186488)
chr8 (174-267)||(39071978-39072070)
chr8 (172-267)||(38862899-38862994)
chr8 (175-267)||(20385568-20385660)
chr8 (175-267)||(38956008-38956100)
chr8 (181-267)||(1425059-1425145)
chr8 (173-255)||(20386778-20386860)
chr8 (175-249)||(31608867-31608941)
chr8 (181-267)||(40317970-40318056)
chr8 (174-267)||(23663544-23663637)
chr8 (174-251)||(33357497-33357574)
chr8 (35-86)||(33889049-33889100)
chr8 (174-315)||(12198949-12199097)
chr8 (174-315)||(12443377-12443525)
chr8 (175-315)||(34685539-34685685)
chr8 (174-250)||(34060488-34060564)
chr8 (175-250)||(2535903-2535978)
chr8 (175-253)||(2534695-2534773)
chr8 (175-249)||(4406014-4406088)
chr8 (181-267)||(36186107-36186193)
chr8 (173-267)||(36928812-36928906)
chr8 (163-296)||(34176433-34176569)
chr8 (181-261)||(34177312-34177392)
chr8 (176-267)||(30712053-30712143)
chr8 (176-267)||(30719830-30719920)
chr8 (181-263)||(12272924-12273006)
chr8 (174-267)||(4994656-4994749)
chr8 (181-254)||(7295276-7295349)
chr8 (175-267)||(23698308-23698401)
chr8 (189-308)||(27500374-27500490)
chr8 (173-250)||(34061681-34061758)
chr8 (175-232)||(39071676-39071733)
chr8 (168-249)||(40318318-40318399)
chr8 (207-267)||(35756918-35756978)
chr8 (174-249)||(8316942-8317017)
chr8 (173-244)||(10749867-10749938)
chr8 (173-232)||(13186058-13186117)
chr8 (174-225)||(16388582-16388633)
chr8 (173-227)||(4995032-4995086)
chr8 (173-227)||(7306397-7306451)
chr8 (181-243)||(12273213-12273275)
chr8 (213-267)||(22915427-22915481)
chr8 (176-296)||(7294103-7294229)
chr8 (174-227)||(7313381-7313434)
chr8 (175-232)||(16388897-16388954)
chr8 (174-219)||(36186448-36186493)
chr8 (176-232)||(11763047-11763103)
chr8 (174-226)||(23663891-23663943)
chr8 (173-232)||(22915729-22915788)
chr8 (174-249)||(23698598-23698673)
chr8 (175-250)||(30459371-30459446)
chr8 (169-249)||(12199260-12199340)
chr8 (169-249)||(12443688-12443768)
chr8 (168-248)||(31608520-31608599)
chr8 (175-219)||(38862618-38862662)
chr8 (175-227)||(42803594-42803646)
chr8 (181-244)||(9065671-9065734)
chr8 (177-255)||(43181500-43181578)
chr8 (174-222)||(11761839-11761887)
chr8 (174-226)||(35756583-35756634)
chr8 (200-232)||(36928501-36928533)
[»] chr5 (75 HSPs)
chr5 (181-451)||(37992436-37992710)
chr5 (181-267)||(19892314-19892400)
chr5 (174-267)||(6150756-6150849)
chr5 (174-267)||(37991198-37991291)
chr5 (173-261)||(42265733-42265821)
chr5 (181-267)||(8322740-8322826)
chr5 (173-267)||(11762053-11762147)
chr5 (174-267)||(14194422-14194515)
chr5 (175-267)||(27587451-27587543)
chr5 (176-267)||(16156856-16156947)
chr5 (176-267)||(38442403-38442494)
chr5 (175-265)||(5024019-5024109)
chr5 (173-267)||(16083279-16083373)
chr5 (181-267)||(35512450-35512536)
chr5 (173-267)||(39453635-39453729)
chr5 (174-267)||(13963165-13963258)
chr5 (174-267)||(28269421-28269514)
chr5 (174-267)||(28770868-28770961)
chr5 (175-267)||(17202735-17202827)
chr5 (173-264)||(3528871-3528962)
chr5 (188-267)||(5994225-5994304)
chr5 (173-267)||(6301879-6301971)
chr5 (176-267)||(19517943-19518034)
chr5 (173-267)||(18247412-18247506)
chr5 (181-267)||(21257497-21257583)
chr5 (173-267)||(32242578-32242671)
chr5 (181-267)||(43159150-43159236)
chr5 (174-267)||(29646361-29646454)
chr5 (175-315)||(38475033-38475180)
chr5 (175-267)||(186755-186847)
chr5 (181-261)||(11740693-11740773)
chr5 (181-267)||(11047773-11047858)
chr5 (174-267)||(20814135-20814227)
chr5 (174-244)||(38475358-38475428)
chr5 (168-244)||(16157214-16157290)
chr5 (176-232)||(18247087-18247143)
chr5 (199-267)||(21265167-21265235)
chr5 (174-262)||(24547176-24547264)
chr5 (181-249)||(35512154-35512222)
chr5 (165-232)||(5993879-5993946)
chr5 (173-232)||(6150452-6150511)
chr5 (173-267)||(6301544-6301635)
chr5 (174-249)||(20840532-20840607)
chr5 (175-249)||(3529196-3529270)
chr5 (176-296)||(11741817-11741944)
chr5 (171-232)||(18670198-18670259)
chr5 (174-267)||(20840773-20840866)
chr5 (173-262)||(24141450-24141539)
chr5 (173-250)||(40148896-40148973)
chr5 (173-249)||(11761747-11761823)
chr5 (174-226)||(20814512-20814564)
chr5 (174-225)||(21265520-21265571)
chr5 (176-267)||(35920229-35920320)
chr5 (173-227)||(24547501-24547555)
chr5 (175-249)||(27587148-27587222)
chr5 (174-267)||(27937054-27937145)
chr5 (174-232)||(42067895-42067953)
chr5 (181-226)||(5024395-5024440)
chr5 (181-262)||(5835767-5835848)
chr5 (175-232)||(28771209-28771266)
chr5 (181-226)||(39453306-39453351)
chr5 (181-232)||(13362599-13362650)
chr5 (181-244)||(19892667-19892730)
chr5 (181-232)||(32242248-32242299)
chr5 (173-244)||(40150173-40150244)
chr5 (181-267)||(10684274-10684359)
chr5 (174-232)||(13962863-13962921)
chr5 (168-226)||(17202392-17202450)
chr5 (181-223)||(27937379-27937421)
chr5 (175-232)||(35920555-35920612)
chr5 (169-249)||(16082971-16083051)
chr5 (177-232)||(5256383-5256437)
chr5 (175-233)||(30096912-30096970)
chr5 (173-250)||(5835621-5835698)
chr5 (261-309)||(5255110-5255158)
[»] chr7 (64 HSPs)
chr7 (173-267)||(24389121-24389215)
chr7 (168-296)||(32298770-32298898)
chr7 (174-314)||(48788802-48788949)
chr7 (176-267)||(42019598-42019689)
chr7 (168-267)||(10936130-10936229)
chr7 (174-267)||(17102325-17102418)
chr7 (173-296)||(27396627-27396757)
chr7 (175-267)||(40380020-40380112)
chr7 (181-267)||(27992044-27992130)
chr7 (173-267)||(28469008-28469102)
chr7 (174-250)||(5457260-5457336)
chr7 (173-267)||(6253776-6253870)
chr7 (181-267)||(47945363-47945449)
chr7 (181-267)||(47950793-47950879)
chr7 (166-267)||(2640169-2640270)
chr7 (174-262)||(17886831-17886919)
chr7 (175-250)||(42362450-42362525)
chr7 (174-249)||(45010958-45011033)
chr7 (175-296)||(13386047-13386175)
chr7 (173-267)||(32053141-32053235)
chr7 (175-253)||(43123175-43123253)
chr7 (181-315)||(19204739-19204880)
chr7 (174-249)||(28469362-28469437)
chr7 (168-262)||(13384495-13384589)
chr7 (198-315)||(17885651-17885775)
chr7 (175-249)||(18670217-18670291)
chr7 (174-236)||(20426697-20426759)
chr7 (175-249)||(37657191-37657265)
chr7 (174-235)||(28105500-28105561)
chr7 (181-249)||(40379775-40379843)
chr7 (173-244)||(6571011-6571082)
chr7 (174-232)||(27396966-27397024)
chr7 (168-249)||(17102013-17102094)
chr7 (174-263)||(42731759-42731848)
chr7 (176-296)||(3914438-3914560)
chr7 (174-226)||(29144359-29144411)
chr7 (181-236)||(24388825-24388880)
chr7 (175-249)||(10935794-10935868)
chr7 (172-238)||(19204486-19204552)
chr7 (183-249)||(30128701-30128767)
chr7 (173-227)||(34793902-34793956)
chr7 (175-249)||(42731419-42731493)
chr7 (176-249)||(6253472-6253545)
chr7 (174-263)||(18086288-18086377)
chr7 (175-263)||(18087678-18087766)
chr7 (393-451)||(18855838-18855898)
chr7 (173-249)||(22871631-22871707)
chr7 (176-232)||(23181365-23181421)
chr7 (173-249)||(30127439-30127514)
chr7 (174-253)||(20425477-20425556)
chr7 (175-250)||(33808323-33808398)
chr7 (176-227)||(34799534-34799585)
chr7 (173-223)||(29141556-29141606)
chr7 (168-249)||(27991732-27991813)
chr7 (176-249)||(32299059-32299132)
chr7 (181-225)||(42019975-42020019)
chr7 (176-251)||(1960227-1960302)
chr7 (175-238)||(18856019-18856082)
chr7 (261-308)||(43266359-43266406)
chr7 (174-244)||(18855409-18855479)
chr7 (165-226)||(15714669-15714730)
chr7 (173-250)||(32687395-32687472)
chr7 (181-226)||(37656858-37656903)
chr7 (174-250)||(10092221-10092297)
[»] chr2 (52 HSPs)
chr2 (173-315)||(37895345-37895494)
chr2 (174-267)||(44045338-44045431)
chr2 (175-267)||(21370538-21370630)
chr2 (167-267)||(36480054-36480154)
chr2 (169-263)||(25230096-25230190)
chr2 (181-267)||(44713801-44713887)
chr2 (174-267)||(39498615-39498708)
chr2 (181-261)||(6588689-6588769)
chr2 (186-317)||(13692499-13692637)
chr2 (173-264)||(36382466-36382557)
chr2 (173-267)||(16099360-16099454)
chr2 (173-267)||(36755424-36755518)
chr2 (175-264)||(10713062-10713151)
chr2 (174-267)||(34448131-34448224)
chr2 (174-267)||(39423851-39423944)
chr2 (175-267)||(6658183-6658275)
chr2 (175-267)||(11163054-11163146)
chr2 (174-250)||(25231201-25231277)
chr2 (173-267)||(2318846-2318940)
chr2 (173-267)||(45556383-45556477)
chr2 (174-267)||(15848424-15848517)
chr2 (173-261)||(3555248-3555336)
chr2 (175-267)||(9076403-9076495)
chr2 (168-267)||(44044107-44044206)
chr2 (175-261)||(3556351-3556437)
chr2 (173-238)||(6589724-6589789)
chr2 (168-250)||(28230092-28230174)
chr2 (174-238)||(28228669-28228733)
chr2 (174-249)||(11163377-11163452)
chr2 (173-232)||(15848086-15848145)
chr2 (175-250)||(30729621-30729696)
chr2 (181-232)||(36479723-36479775)
chr2 (173-249)||(45556110-45556186)
chr2 (172-227)||(34447810-34447865)
chr2 (182-249)||(39498317-39498384)
chr2 (174-308)||(39936535-39936675)
chr2 (174-232)||(6657877-6657935)
chr2 (173-243)||(6846782-6846852)
chr2 (174-232)||(43742047-43742105)
chr2 (261-357)||(11347516-11347613)
chr2 (174-227)||(36382160-36382213)
chr2 (176-232)||(2318160-2318215)
chr2 (183-227)||(10712731-10712775)
chr2 (181-225)||(37895725-37895769)
chr2 (175-250)||(6307071-6307145)
chr2 (175-226)||(39423515-39423566)
chr2 (176-238)||(3653444-3653506)
chr2 (393-431)||(39936453-39936491)
chr2 (174-232)||(44714132-44714189)
chr2 (175-232)||(16099055-16099112)
chr2 (168-308)||(41587228-41587374)
chr2 (170-250)||(199016-199096)
[»] chr1 (81 HSPs)
chr1 (174-267)||(6367898-6367991)
chr1 (171-267)||(17661848-17661943)
chr1 (175-315)||(32917541-32917688)
chr1 (175-267)||(46899061-46899153)
chr1 (172-267)||(46899936-46900031)
chr1 (174-315)||(30711608-30711756)
chr1 (182-315)||(49723007-49723147)
chr1 (174-267)||(36694281-36694374)
chr1 (174-267)||(36710382-36710475)
chr1 (173-267)||(1103797-1103891)
chr1 (173-267)||(5735047-5735141)
chr1 (181-267)||(37578198-37578284)
chr1 (174-264)||(43759161-43759251)
chr1 (175-267)||(183221-183313)
chr1 (175-267)||(24009575-24009667)
chr1 (175-267)||(47999123-47999215)
chr1 (174-267)||(13914067-13914160)
chr1 (175-267)||(26024728-26024820)
chr1 (181-249)||(42533030-42533098)
chr1 (173-267)||(7821290-7821383)
chr1 (173-267)||(48779455-48779549)
chr1 (174-267)||(19322891-19322984)
chr1 (174-267)||(35473630-35473723)
chr1 (175-279)||(31197065-31197171)
chr1 (175-250)||(34850418-34850493)
chr1 (181-248)||(40435351-40435418)
chr1 (181-267)||(1841795-1841880)
chr1 (181-267)||(23209368-23209453)
chr1 (168-250)||(32132297-32132379)
chr1 (181-267)||(40210376-40210462)
chr1 (175-232)||(34464449-34464506)
chr1 (173-249)||(25647882-25647958)
chr1 (173-249)||(40772813-40772889)
chr1 (174-249)||(19017983-19018058)
chr1 (174-249)||(23209681-23209756)
chr1 (175-250)||(34849011-34849086)
chr1 (181-315)||(41099014-41099155)
chr1 (181-267)||(4960845-4960931)
chr1 (175-249)||(6367562-6367636)
chr1 (168-250)||(17691212-17691294)
chr1 (173-267)||(19017627-19017721)
chr1 (181-267)||(19323228-19323314)
chr1 (174-232)||(34464820-34464878)
chr1 (176-314)||(35152625-35152757)
chr1 (168-225)||(37578570-37578627)
chr1 (181-253)||(40439539-40439611)
chr1 (175-232)||(40772507-40772564)
chr1 (198-267)||(48691171-48691240)
chr1 (174-250)||(5734009-5734084)
chr1 (181-261)||(17692527-17692607)
chr1 (174-226)||(19515818-19515870)
chr1 (176-249)||(4960541-4960614)
chr1 (176-249)||(13914421-13914494)
chr1 (169-226)||(26024417-26024474)
chr1 (174-227)||(35152342-35152395)
chr1 (173-225)||(17662228-17662280)
chr1 (174-226)||(41098732-41098784)
chr1 (181-253)||(42534366-42534437)
chr1 (167-250)||(13300257-13300340)
chr1 (181-232)||(46163036-46163087)
chr1 (173-267)||(7231585-7231679)
chr1 (184-250)||(35038464-35038530)
chr1 (174-232)||(47999463-47999521)
chr1 (173-227)||(51019725-51019779)
chr1 (181-226)||(42248479-42248524)
chr1 (174-227)||(51015632-51015685)
chr1 (173-245)||(7820952-7821024)
chr1 (184-232)||(14878980-14879028)
chr1 (175-223)||(30711327-30711375)
chr1 (174-226)||(36694625-36694677)
chr1 (174-226)||(36710726-36710778)
chr1 (175-222)||(6518177-6518224)
chr1 (175-314)||(14879253-14879386)
chr1 (168-226)||(24009918-24009976)
chr1 (174-255)||(32133271-32133353)
chr1 (181-226)||(40210747-40210792)
chr1 (175-244)||(42267303-42267372)
chr1 (174-249)||(183545-183621)
chr1 (174-226)||(1841458-1841510)
chr1 (175-223)||(26234430-26234478)
chr1 (174-250)||(44522146-44522222)
[»] chr6 (36 HSPs)
chr6 (181-315)||(11434808-11434949)
chr6 (173-267)||(3059592-3059686)
chr6 (173-267)||(679864-679958)
chr6 (173-267)||(21627711-21627805)
chr6 (165-267)||(30726095-30726197)
chr6 (173-267)||(33517870-33517964)
chr6 (174-267)||(13379818-13379911)
chr6 (174-267)||(33647287-33647380)
chr6 (174-267)||(681064-681157)
chr6 (181-267)||(30804197-30804283)
chr6 (174-267)||(12080972-12081065)
chr6 (174-267)||(20651009-20651102)
chr6 (174-250)||(26463178-26463254)
chr6 (175-267)||(30337754-30337846)
chr6 (175-262)||(15116573-15116660)
chr6 (173-267)||(17734194-17734288)
chr6 (173-264)||(20651986-20652077)
chr6 (173-267)||(11393140-11393234)
chr6 (173-250)||(8089441-8089518)
chr6 (174-250)||(8090280-8090356)
chr6 (175-262)||(15115339-15115426)
chr6 (175-249)||(26464553-26464627)
chr6 (174-250)||(12408524-12408600)
chr6 (175-246)||(12407508-12407579)
chr6 (173-232)||(21628084-21628143)
chr6 (174-253)||(28498375-28498454)
chr6 (174-249)||(30337448-30337523)
chr6 (181-249)||(3059263-3059331)
chr6 (174-232)||(29810807-29810865)
chr6 (177-249)||(13378527-13378599)
chr6 (176-232)||(17734534-17734590)
chr6 (165-224)||(22617872-22617932)
chr6 (181-249)||(30803867-30803935)
chr6 (181-249)||(33517540-33517608)
chr6 (185-232)||(12080646-12080693)
chr6 (175-226)||(30725760-30725810)
[»] chr4 (79 HSPs)
chr4 (174-267)||(148091-148184)
chr4 (174-267)||(10781820-10781913)
chr4 (174-267)||(51692855-51692948)
chr4 (173-336)||(1179060-1179230)
chr4 (173-267)||(10780711-10780805)
chr4 (173-267)||(10974320-10974414)
chr4 (174-315)||(24711361-24711509)
chr4 (174-267)||(24349673-24349766)
chr4 (174-267)||(24411684-24411777)
chr4 (174-267)||(34765379-34765472)
chr4 (174-267)||(50418667-50418760)
chr4 (175-267)||(147319-147411)
chr4 (181-264)||(43155535-43155618)
chr4 (174-253)||(55867464-55867543)
chr4 (173-267)||(13058318-13058412)
chr4 (175-296)||(18831617-18831745)
chr4 (173-267)||(24350768-24350862)
chr4 (181-267)||(35028004-35028090)
chr4 (174-295)||(39539219-39539347)
chr4 (174-267)||(52909589-52909682)
chr4 (175-267)||(7452139-7452231)
chr4 (176-267)||(15507674-15507765)
chr4 (173-267)||(46661250-46661344)
chr4 (176-267)||(49879208-49879299)
chr4 (181-267)||(11108176-11108262)
chr4 (181-267)||(37248541-37248627)
chr4 (181-267)||(44967075-44967161)
chr4 (174-267)||(36008843-36008936)
chr4 (175-267)||(5369203-5369295)
chr4 (173-315)||(17355923-17356072)
chr4 (175-265)||(23613616-23613706)
chr4 (168-250)||(48528478-48528560)
chr4 (173-315)||(53702093-53702228)
chr4 (173-250)||(40387465-40387542)
chr4 (174-249)||(7451833-7451908)
chr4 (173-232)||(23613307-23613366)
chr4 (174-261)||(54435439-54435526)
chr4 (171-249)||(35028352-35028430)
chr4 (181-267)||(37976159-37976245)
chr4 (173-227)||(40388482-40388536)
chr4 (173-249)||(1178055-1178130)
chr4 (173-249)||(24711109-24711185)
chr4 (174-250)||(41582446-41582522)
chr4 (181-245)||(54086701-54086765)
chr4 (181-236)||(17356289-17356344)
chr4 (174-249)||(34765734-34765809)
chr4 (175-225)||(55866111-55866161)
chr4 (173-250)||(11448082-11448159)
chr4 (173-226)||(14801734-14801787)
chr4 (174-223)||(41583611-41583660)
chr4 (174-227)||(50419013-50419066)
chr4 (393-451)||(1178177-1178237)
chr4 (173-249)||(5368945-5369021)
chr4 (174-226)||(13058036-13058088)
chr4 (175-267)||(14802071-14802163)
chr4 (173-225)||(32063714-32063766)
chr4 (173-249)||(53129860-53129936)
chr4 (173-232)||(18831347-18831406)
chr4 (174-225)||(29321283-29321334)
chr4 (174-249)||(43155850-43155925)
chr4 (174-249)||(44967392-44967467)
chr4 (181-223)||(15508052-15508094)
chr4 (174-232)||(51692552-51692610)
chr4 (173-250)||(11446268-11446345)
chr4 (173-222)||(30642527-30642576)
chr4 (181-238)||(54087060-54087117)
chr4 (181-245)||(16006151-16006215)
chr4 (175-250)||(30641520-30641593)
chr4 (181-249)||(37248242-37248310)
chr4 (207-267)||(54713661-54713721)
chr4 (181-232)||(24411364-24411415)
chr4 (174-244)||(36009172-36009243)
chr4 (173-267)||(53129504-53129598)
chr4 (174-232)||(37976524-37976582)
chr4 (176-226)||(52909254-52909304)
chr4 (181-223)||(53701818-53701860)
chr4 (175-232)||(32062589-32062646)
chr4 (174-222)||(35508621-35508669)
chr4 (165-205)||(54713606-54713646)
[»] scaffold0707 (1 HSPs)
scaffold0707 (173-267)||(6415-6509)
[»] scaffold0775 (2 HSPs)
scaffold0775 (174-308)||(4961-5102)
scaffold0775 (395-431)||(5147-5183)
[»] scaffold0031 (2 HSPs)
scaffold0031 (175-267)||(69301-69393)
scaffold0031 (175-232)||(68965-69022)
[»] scaffold0075 (2 HSPs)
scaffold0075 (174-267)||(14428-14521)
scaffold0075 (175-226)||(14767-14818)
[»] scaffold0020 (2 HSPs)
scaffold0020 (181-267)||(139977-140063)
scaffold0020 (181-249)||(139678-139746)
[»] scaffold0007 (2 HSPs)
scaffold0007 (173-267)||(2077-2171)
scaffold0007 (174-232)||(1768-1826)
[»] scaffold0128 (1 HSPs)
scaffold0128 (181-250)||(19863-19932)
[»] scaffold0005 (2 HSPs)
scaffold0005 (173-226)||(37940-37993)
scaffold0005 (175-267)||(37564-37656)
[»] scaffold0220 (2 HSPs)
scaffold0220 (173-249)||(24700-24776)
scaffold0220 (174-244)||(23230-23300)
[»] scaffold0295 (1 HSPs)
scaffold0295 (174-226)||(2506-2558)


Alignment Details
Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 175 - 451
Target Start/End: Complemental strand, 3850555 - 3850266
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatca-------tt 267  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||| ||||||||  ||||||||       ||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaactagctctgcaatcattaatcgtt 3850456  T
Q  268 taaaatttcatcatttgacctagttaatcgatgtcacgtcaccaatttacccttcctcttctcagaccattggaaaaagacaaaaataccccttagacaa 367  Q
    ||||||||| ||  |   ||| |||||||  || ||||||| |||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||    
T  3850455 taaaatttcgtccctcatccttgttaatcactgccacgtcagcaatttaccccttctcttctcagaccgttgggaaaagacaaaaataccccttagacaa 3850356  T
Q  368 acacgaaaggacnnnnnnnnncctaatgtcatcttctcaaaagcttcactcctcttctcttctc------gcatcgcacaccaccaccaa 451  Q
    ||| ||||||||         ||| ||||||||||||||||| |||||||||||||||||||||      ||||||||||||||||||||    
T  3850355 acatgaaaggacaaaaaaaaccctgatgtcatcttctcaaaaccttcactcctcttctcttctcttctctgcatcgcacaccaccaccaa 3850266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 23457988 - 23458126
Alignment:
Q  184 atgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaatttc 276  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||       ||||||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  277 atcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
     || ||||||| | ||||||  || |||||||| |||||    
T  23458088 gtcctttgaccaacttaatcactgccacgtcactaattt 23458126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 3849029 - 3849123
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||| | |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||    
T  3849029 aaggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcatt 3849123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 33689380 - 33689473
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| | || ||||||||||||| |||||||||||    
T  33689380 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt-catgtattcgctaattcttgcaaactagccttgcaatcatt 33689473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 40758539 - 40758446
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||| | |||||||||||||||  |||||||||||    
T  40758539 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcatt 40758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 36418116 - 36418024
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| || ||||| ||||||||||||||||||| | |||||||| | |||||||||||||||| |||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcatt 36418024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 41558316 - 41558218
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| | ||||||||||| |||  |||||||||||    
T  41558316 aaaagaaggcta-aatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcatt 41558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 26463638 - 26463724
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||  |||||||||||    
T  26463638 aatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcatt 26463724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 1079650 - 1079562
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||| ||||| ||||| ||||| |||| ||||||    
T  1079650 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaa 1079562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 36417697 - 36417780
Alignment:
Q  184 atgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||| || ||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  36417697 atgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 36417780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 53757150 - 53757059
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||| | ||||||||   |||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcatt 53757059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 9367740 - 9367829
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    |||||| ||||||||||| |||||| |||||| |||||||||||||| |||||  |||||||| | |||||||||||||||| |||||||    
T  9367740 aggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaat 9367829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 19740922 - 19741015
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| || | |||||||| || |||||||||||||||||| |||| ||| | |||||||||||||||| |||||||||||    
T  19740922 aggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcatt 19741015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 40033526 - 40033634
Alignment:
Q  182 atatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatttaaaatttcatcat 281  Q
    |||| |||||||||| ||||||||||| |||||||||||||| |||||||||||| | |||||||||    | ||||  |||||||||||||||| ||||    
T  40033526 atatatatttcatccttgcaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgca----atcatt--aatcatttaaaatttcgtcat 40033619  T
Q  282 ttgacctagttaatc 296  Q
    |||||| | ||||||    
T  40033620 ttgaccaacttaatc 40033634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 42343153 - 42343071
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||||||||||| | ||| ||||||| |||  |||||||    
T  42343153 aatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaat 42343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 43384705 - 43384619
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||  | |||||||| |||||||||||||||| |||||||||||    
T  43384705 aatatgtatttcatccttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaactagccttgcaatcatt 43384619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 46475202 - 46475117
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| | |||||| ||||||||||||||||| | | |||||||| | |||||||||||||||| |||||||||||    
T  46475202 aatatgtatttcatccttacaattaggggtcgtttaaaaattgatac-tgtattcgctaatccttgcaaactagccttgcaatcatt 46475117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 47856386 - 47856456
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||| ||||| |||||    
T  47856386 aggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcct 47856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 35712045 - 35712118
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| |||||||||||||||| |||||||| || || |||||||||||||||||||||||| | ||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaa 35712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 40758147 - 40758204
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 40758204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 43607782 - 43607855
Alignment:
Q  177 ctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||| |||| |||||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||||    
T  43607782 ctttaatatgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaaa 43607855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 9368726 - 9368654
Alignment:
Q  178 tttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||| || || |||||||||||    
T  9368726 tttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaa 9368654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 23458408 - 23458333
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||  |||| ||| | ||||||||||    
T  23458408 aggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaa 23458333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 41558007 - 41558081
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgca 248  Q
    |||||| |||||||||||||| | |||||||| ||||||||||||||||||| | |||||||| | |||||||||    
T  41558007 aggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgca 41558081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 42342790 - 42342848
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  42342790 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgta 42342848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 53856487 - 53856409
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaac 251  Q
    ||||||| ||||||||||| |||||||||| || |||||| |||||||||||||| |||||||  | ||||||||||||    
T  53856487 aaggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaac 53856409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 9294386 - 9294334
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 9294334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 19741323 - 19741263
Alignment:
Q  172 gaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  19741323 gaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 19741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 23276410 - 23276354
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||| ||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgta 23276354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 2796527 - 2796464
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcg 236  Q
    ||||||| |||||||| ||||||| |||||||| | || |||||||||||||||||||||||||    
T  2796527 aaggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcg 2796464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 33689808 - 33689733
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||| |||||| ||| | ||||| ||||    
T  33689808 aggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaa 33689733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 34142646 - 34142583
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| |||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgtt 34142583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 36150533 - 36150596
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| | |||| ||| |||||    
T  36150533 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatatttgttaatcct 36150596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 40033885 - 40033834
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  40033885 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 21783406 - 21783476
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    |||||||||||||||| || |||||||||||||||  |||||||| | |||||||| | ||||||||||||||    
T  21783406 aatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgtattcgctaatccttgcaaacta 21783476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 42855710 - 42855615
Alignment:
Q  198 tgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaatttcatcatttgac 286  Q
    |||||||| | ||| |||||||||| ||||||||||||| | |||||||||||||||| ||||       ||||||||||||||||||| ||||||    
T  42855710 tgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttcatcctttgac 42855615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 1078536 - 1078600
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||||||||||| |||| ||| |||||||| ||||| ||||||||||||||| |||| |||||    
T  1078536 aggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgtt 1078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 21186124 - 21186048
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||||| |||  ||| |||||||| ||||| ||||||||||||| |||||| ||||| ||||| |||||    
T  21186124 aggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaa 21186048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 25108522 - 25108466
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgta 25108466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 32431617 - 32431533
Alignment:
Q  178 tttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    ||||||||||||||| |||||| ||||| ||||| ||||||||||||||| || | ||||| |||||  |||| |||| ||||||    
T  32431617 tttaatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaa 32431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 2796178 - 2796253
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||| |||| ||| | ||||| ||||    
T  2796178 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaa 2796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 51993963 - 51994034
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcctt 245  Q
    |||||| ||||||||||| |||  ||||||||  |||||||||||||||||||| |||||||| | ||||||    
T  51993963 aggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 25107206 - 25107264
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||| ||||||| | ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  25107206 aaaaaaaggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtc 25107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 47856571 - 47856609
Alignment:
Q  393 atgtcatcttctcaaaagcttcactcctcttctcttctc 431  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  47856571 atgtcatcttctcaaaaccttcactcctcttctcttctc 47856609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 47857489 - 47857451
Alignment:
Q  393 atgtcatcttctcaaaagcttcactcctcttctcttctc 431  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  47857489 atgtcatcttctcaaaaccttcactcctcttctcttctc 47857451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 9292249 - 9292294
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||| |||||||| || |||||||||||||||||    
T  9292249 aatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 26464016 - 26463963
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||||| |||||||||||||||| ||||||||  | |||||||||||||||||    
T  26464016 aaggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtc 26463963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 46474821 - 46474866
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||    
T  46474821 aatatgtatttcatctttgcaattaggggtcgtttaaaaattggtc 46474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 53756750 - 53756807
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||||||||||||  |||||||| ||||||||||||||||| | |||||| |||||    
T  53756750 aatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgtt 53756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 51994313 - 51994257
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||| ||||||||||| |||| |||||||| || |||||||||||||||||| ||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgta 51994257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 53856015 - 53856067
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||| ||||||||||| |||||||||| || |||||| ||||||||||||||    
T  53856015 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtcc 53856067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 23272823 - 23272874
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||||| ||||||||||||||||| || |  |||||||||||||    
T  23272823 aggctttaatatgtctttcatccctgcaattagggattatttaaaaattggt 23272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 47857673 - 47857533
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatt 267  Q
    ||||||||||||| |||| |||||| ||||| | ||||||||||||||| ||  |||| ||||| || || | ||| || | ||||       |||||||    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatt 47857574  T
Q  268 taaaatttcatcatttgacctagttaatcgatgtcacgtca 308  Q
    ||||||||| |||||||||| | |||||| ||| |||||||    
T  47857573 taaaatttcgtcatttgaccaacttaatcaatgccacgtca 47857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 21783899 - 21783850
Alignment:
Q  199 gcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgca 248  Q
    ||||||| |||||||||||||||| |||| | |||||||| |||||||||    
T  21783899 gcaattaggggtcgtttaaaaattagtccttatattcgttaatccttgca 21783850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 33154885 - 33154946
Alignment:
Q  183 tatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    ||||| |||| ||| |||||||| ||||| ||||||||||||||| |||| ||||| |||||    
T  33154885 tatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcct 33154946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 6956251 - 6956323
Alignment:
Q  178 tttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||| |||| |||||||||||| || || |||||||||| |||| | || ||||| ||||| |||||    
T  6956251 tttaatatgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaa 6956323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 44654931 - 44654871
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattc 235  Q
    |||||| |||||| |||  ||||||||| || ||||| |||||||||| ||||||||||||    
T  44654931 ggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaatttgtccatgtattc 44654871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 55052298 - 55052366
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||||| |||| |  ||||| ||||||| ||||||||||||  |||||||| | ||||||||||    
T  55052298 aatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatccttgcaa 55052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 33888861 - 33888767
Alignment:
Q  80 tactttattagtgtttcatctgatatttttgagctgcacttaagagaataatatttagttatatttgtgcatcttttttgtatagaataaaagaa 174  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33888861 tactttattagtgtttcaactgatatttttgagctgcacttaagagaataatatttagttatatttgtgcatcttttatgtatagaataaaagaa 33888767  T

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Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 8316651 - 8316745
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  8316651 aaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcatt 8316745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 315
Target Start/End: Complemental strand, 13186488 - 13186340
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------cat 266  Q
    |||||| ||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||       |||    
T  13186488 aggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 13186389  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||| |||||||||| ||||||||  || |||||||| |||||    
T  13186388 ttaaaatttcgtcatttgaccaagttaatcactgccacgtcactaattt 13186340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 39072070 - 39071978
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  39072070 aggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcatt 39071978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 38862994 - 38862899
Alignment:
Q  172 gaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| || |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  38862994 gaaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcatt 38862899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 20385568 - 20385660
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 20385660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 38956100 - 38956008
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | ||||||| |||||||| |||||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcatt 38956008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 1425059 - 1425145
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||  | |||||||||||||||| |||||||||||    
T  1425059 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcatt 1425145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 20386860 - 20386778
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagc 255  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  20386860 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagc 20386778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 31608941 - 31608867
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 31608867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 40317970 - 40318056
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||  |||||||| | |||||||||||||||| |||||||||||    
T  40317970 aatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcatt 40318056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 23663544 - 23663637
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||| | ||| |||||||    
T  23663544 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcatt 23663637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 33357497 - 33357574
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaac 251  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| | ||||||||||||    
T  33357497 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaaac 33357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 33889100 - 33889049
Alignment:
Q  35 cttctaaatataagctcattttcaaactttgagcttcattcataatacttta 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33889100 cttctaaatataagctcattttcaaactttgagcttcattcataatacttta 33889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 315
Target Start/End: Original strand, 12198949 - 12199097
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| | || ||| | |||||||||||||||  ||||       ||||||    
T  12198949 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcat 12199048  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||| || ||||||| | ||||||  ||||||||||| |||||    
T  12199049 ttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaattt 12199097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 315
Target Start/End: Original strand, 12443377 - 12443525
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| | || ||| | |||||||||||||||  ||||       ||||||    
T  12443377 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcat 12443476  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||| || ||||||| | ||||||  ||||||||||| |||||    
T  12443477 ttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaattt 12443525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 34685685 - 34685539
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| || |||||||||||||||| | |||||||| | |||||||||||||||| || |       |||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggt-cttgtattcgctaatccttgcaaactagccttacaatcattaatcatt 34685587  T
Q  268 taaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||||||||| |||||||||| | ||||||  ||||||||||| |||||    
T  34685586 taaaatttcgtcatttgaccaacttaatcactgtcacgtcactaattt 34685539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 34060488 - 34060564
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| |||||||||||||||| |||||||||  |||||||||||||||||||||||| ||| | |||||||||||    
T  34060488 aggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaa 34060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 2535978 - 2535903
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||| ||||| ||||| |||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaa 2535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 2534695 - 2534773
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    ||||| ||||||||||||  ||||||||||| ||||||||||||||||||| |||||| ||| | ||||||||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaacta 2534773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 4406088 - 4406014
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| |||||||||||||||| || ||||| |||| ||||||||||||||||||||||| ||| ||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaa 4406014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 36186107 - 36186193
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||  || ||||| ||||| ||||||| ||||||| |||||||| | ||||||||||||||| ||||||||||||    
T  36186107 aatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatcatt 36186193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 36928906 - 36928812
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||  ||||||||    ||||||||||||||||| ||||||| | | |||||||||||||||| |||||||||||    
T  36928906 aaggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcatt 36928812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 34176433 - 34176569
Alignment:
Q  163 agaataaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-- 260  Q
    |||| ||||| ||| || |||||||||||||||| ||||||| | ||||||||||||||||||   | |||||||| |||||||||||||||  ||||      
T  34176433 agaaaaaaagtaggtttaaatatgtatttcatccttgcaatt-atggtcgtttaaaaattggt---tatattcgttaatccttgcaaactagtcttgcat 34176528  T
Q  261 -----aatcatttaaaatttcatcatttgacctagttaatc 296  Q
         ||||||||||||||||||| ||||||| ||||||||    
T  34176529 tctttaatcatttaaaatttcatcctttgacccagttaatc 34176569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 34177392 - 34177312
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||| |||||||| | ||||||| |||||||| |||||    
T  34177392 aatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgca 34177312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 30712143 - 30712053
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||||||| |||| ||| |||| ||| ||||||||||||||||| |||||| | | |||||||||||||||| |||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcatt 30712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 30719920 - 30719830
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||||||| |||| ||| |||| ||| ||||||||||||||||| |||||| | | |||||||||||||||| |||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcatt 30719830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 12272924 - 12273006
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    ||||||||||| |||| |||||||| || |||||||||||||||||  |||| ||| | |||||||||||||||| |||||||    
T  12272924 aatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaat 12273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 4994656 - 4994749
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||  |||||||| || | |||||||||||| ||  |||||||| | ||||||| |||||||| |||||||||||    
T  4994656 aggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcatt 4994749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 7295349 - 7295276
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactag 254  Q
    ||||||||||| |||| |||||||| || |||||||||||| ||||| |||||||| | |||||||||||||||    
T  7295349 aatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactag 7295276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 23698308 - 23698401
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaaggg-tcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||| ||||||||||||| |||| |||| ||| | || ||||||||||||| |||||||||||    
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcatt 23698401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 27500490 - 27500374
Alignment:
Q  189 tttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatttaaaatttcatcatttgacct 288  Q
    |||| ||| |||||||| ||||| |||||||||||||||||||| ||||| |||||   ||| || | |   |||||||||||||||||||||||||||     
T  27500490 tttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctgaaaaattacctt---aatcatttaaaatttcatcatttgacca 27500394  T
Q  289 agttaatcgatgtcacgtca 308  Q
    | ||||||  ||||||||||    
T  27500393 acttaatcactgtcacgtca 27500374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 34061758 - 34061681
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||| |||||||||| ||||| ||||||||   ||||||||||||||| |||||||||||| | |||||||||||    
T  34061758 aaggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaa 34061681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 39071676 - 39071733
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 39071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 40318399 - 40318318
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| ||||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||| ||| | ||||| ||||    
T  40318399 aaaaaaaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaa 40318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 35756978 - 35756918
Alignment:
Q  207 gggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||  |||||||||||    
T  35756978 gggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatcatt 35756918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 8317017 - 8316942
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 8316942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 10749938 - 10749867
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    ||||||||||||||| |||| ||| |||||||| || || |||||||||||||||||||| ||||| |||||    
T  10749938 aaggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcct 10749867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 13186058 - 13186117
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  13186058 aaggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgta 13186117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 16388582 - 16388633
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  16388582 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16388633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 4995086 - 4995032
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  4995086 aaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc 4995032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 7306397 - 7306451
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||| ||||||||||| |||||||||| || |||||||||||||||||||||    
T  7306397 aaggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 7306451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 12273275 - 12273213
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcc 243  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  12273275 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcc 12273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 22915427 - 22915481
Alignment:
Q  213 tttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||||||| ||| | |||||||||||||||| |||||||||||    
T  22915427 tttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcatt 22915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 7294103 - 7294229
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcattt 268  Q
    |||| |||||||||||||||  ||||||||  |||||||||||||||| ||  | |||||| | ||||||| |||||||| ||||       ||||||||    
T  7294103 gcttaaatatgtatttcatct-tgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcattt 7294201  T
Q  269 aaaatttcatcatttgacctagttaatc 296  Q
    ||||||||||| ||||||| ||||||||    
T  7294202 aaaatttcatcctttgacccagttaatc 7294229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 7313434 - 7313381
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||| ||||||||||| |||||||||| || |||||||||||||||||||||    
T  7313434 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 7313381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 16388954 - 16388897
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgta 16388897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 36186493 - 36186448
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaa 219  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  36186493 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 11763103 - 11763047
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||| |||| ||||||||||||||| || ||||||||||||||| ||||    
T  11763103 gctttaatatgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgta 11763047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 23663943 - 23663891
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  23663943 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 23663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 22915788 - 22915729
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| ||||||||||| |||| ||||| || || |||||||||||||||||||||||    
T  22915788 aaggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgta 22915729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 23698673 - 23698598
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| || ||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  23698673 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 23698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 30459371 - 30459446
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| |||||||||||||||| | |||||| | |||||||||||||| ||| ||||||||  | |||||||||||    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaa 30459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 12199340 - 12199260
Alignment:
Q  169 aaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||| ||||||||||| |||| |  ||||| | ||||||||||||||||||| |||| ||| | ||||||||||    
T  12199340 aaagaagacttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12199260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 12443768 - 12443688
Alignment:
Q  169 aaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||| ||||||||||| |||| |  ||||| | ||||||||||||||||||| |||| ||| | ||||||||||    
T  12443768 aaagaagacttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12443688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 31608520 - 31608599
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgca 248  Q
    |||| ||||||| || ||||||||||||| || ||||| || |||||||||||||| | |||||||||| | |||||||||    
T  31608520 aaaaaaaggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattgat-catgtattcgctaatccttgca 31608599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 38862618 - 38862662
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaa 219  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaa 38862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 42803646 - 42803594
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||| |||||||||||||||| ||||||||   |||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtcc 42803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 9065671 - 9065734
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||| | || ||||| |||||    
T  9065671 aatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccctataatcgttaatcct 9065734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 43181578 - 43181500
Alignment:
Q  177 ctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagc 255  Q
    |||||||||||||||| ||  || ||||| || |||||||||||||| |||||| | ||||| ||||||| ||| ||||    
T  43181578 ctttaatatgtatttcgtctttgtaattagggatcgtttaaaaattgatccatgcaatcgttaatccttgtaaattagc 43181500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 11761839 - 11761887
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaatt 222  Q
    |||||||||||||| ||||||||||||||||| || |  ||||||||||    
T  11761839 aggctttaatatgtttttcatccctgcaattagggattatttaaaaatt 11761887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 35756583 - 35756634
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||||  |||||||| ||||| ||||||||||||||    
T  35756583 aggcttaaatatgtatttcatca-tgcaattaggggtcatttaaaaattggtc 35756634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 36928501 - 36928533
Alignment:
Q  200 caattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||||||||||||||||||||||| |||||    
T  36928501 caattaagggtcgtttaaaaattggtctatgta 36928533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 181 - 451
Target Start/End: Complemental strand, 37992710 - 37992436
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt-------taaaat 273  Q
    |||||||||||||||| |||||||| ||||||||||||||| | ||  | |||| | | ||| |||||||||||| |||||||||||       ||||||    
T  37992710 aatatgtatttcatccatgcaattaggggtcgtttaaaaatcgatctctctatttgctaatctttgcaaactagccttgcaatcattaatcgtttaaaat 37992611  T
Q  274 ttcatcatttgacctagttaatcgatgtcacgtcaccaatttacccttcctcttctcagaccattggaaaaagacaaaaataccccttagacaaacacga 373  Q
    ||| ||  |   ||| |||||||  || ||| ||| |||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37992610 ttcgtccctcatccttgttaatcactgccacatcagcaatttaccccttctcttctcagaccgttgggaaaagacaaaaataccccttagacaaacacga 37992511  T
Q  374 aaggac-nnnnnnnnncctaatgtcatcttctcaaaagcttcactcctcttctcttctcgcatcgcacaccaccaccaa 451  Q
    ||||||          ||| ||||||||||||||||| |||||||||||||||||    ||||||||||||||||||||    
T  37992510 aaggacaaaaaaaaaacctgatgtcatcttctcaaaaccttcactcctcttctct----gcatcgcacaccaccaccaa 37992436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 19892314 - 19892400
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  19892314 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcatt 19892400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 6150849 - 6150756
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||    
T  6150849 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcatt 6150756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 37991198 - 37991291
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  37991198 aggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcatt 37991291  T

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Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 42265733 - 42265821
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  42265733 aaggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgca 42265821  T

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Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 8322826 - 8322740
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||    
T  8322826 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcatt 8322740  T

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Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 11762147 - 11762053
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  11762147 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 11762053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 14194422 - 14194515
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  14194422 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 14194515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 27587543 - 27587451
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcatt 27587451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 16156856 - 16156947
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcatt 16156947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 38442494 - 38442403
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||| ||| | |||||||||| |||||||||||||||| |||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcatt 38442403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 5024019 - 5024109
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatca 265  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||| | |||||||||| | |||||||||||||||| |||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatca 5024109  T

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Target: chr5; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 16083373 - 16083279
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||| | |||||||||||||||  |||||||||||    
T  16083373 aaggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcatt 16083279  T

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Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 35512536 - 35512450
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||   |||||||||||||||| |||||||||||    
T  35512536 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcatt 35512450  T

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Target: chr5; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 39453729 - 39453635
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| | ||| |||||||||||| |||||||||||    
T  39453729 aaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcatt 39453635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 13963258 - 13963165
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||| |||||||||| || ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||    
T  13963258 aggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcatt 13963165  T

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Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 28269421 - 28269514
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||||||||||  ||||||| | |||||||||||||||| |||||||||||    
T  28269421 aggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcatt 28269514  T

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Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 28770868 - 28770961
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| || ||||||||    
T  28770868 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcatt 28770961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 17202827 - 17202735
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||| | |||||||||||||||  |||||||||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 17202735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 3528871 - 3528962
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||| | | |||||||||||||||| ||||||||    
T  3528871 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatc 3528962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 5994304 - 5994225
Alignment:
Q  188 atttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||  |||||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcatt 5994225  T

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Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 6301971 - 6301879
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||||||   |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||    
T  6301971 aaggcttaaatatgtatttcatt--tgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcatt 6301879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 19518034 - 19517943
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||| | ||| |||||||||||| |||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcatt 19517943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 18247506 - 18247412
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||  |||||||| | |||||||||||||||  |||||||||||    
T  18247506 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatcatt 18247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 21257583 - 21257497
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |  |||||||| | |||||||||||||||| |||| ||||||    
T  21257583 aatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaaactagccttgcgatcatt 21257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 32242671 - 32242578
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| |||||||||||    
T  32242671 aaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcc-tgtattcgctaatccttgcaaactagccttgcaatcatt 32242578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 43159236 - 43159150
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||| | |||||| ||||||||| |||||||||||    
T  43159236 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcatt 43159150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 29646361 - 29646454
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| || ||||| ||||| |||||||||||||||||||||||| | |||||||||||||||| || ||||||||    
T  29646361 aggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcatt 29646454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 175 - 315
Target Start/End: Original strand, 38475033 - 38475180
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatt 267  Q
    ||||| |||||||||||||||   |||||||| |||| |||||||||||||||||||||||| | |||||||||||||| | ||||       |||||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 38475132  T
Q  268 taaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||||||||| |||||||||| | ||||||  || |||||||| |||||    
T  38475133 taaaatttcgtcatttgaccaacttaatcactgccacgtcactaattt 38475180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 186847 - 186755
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| ||||||||  |||||||||||||||||||| |||||| | | ||| |||||||||||| |||||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcatt 186755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 11740693 - 11740773
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| | |||||||||||||||| |||||    
T  11740693 aatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgca 11740773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 11047858 - 11047773
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| ||||| || ||||||||||||||||||| |||||||||  | |||||||||||||||| |||||||||||    
T  11047858 aatatgtatttcatccttgcaagtaggggtcgtttaaaaattggt-catgtattcactaatccttgcaaactagccttgcaatcatt 11047773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 20814135 - 20814227
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| | ||||||  |||||||||||||||||| | |||||||| | ||||||||||||||| ||||||||||||    
T  20814135 aggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggt-cttgtattcgctaatccttgcaaactagtattgcaatcatt 20814227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 38475428 - 38475358
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||    
T  38475428 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcct 38475358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 16157290 - 16157214
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| | || ||||| |||||    
T  16157290 aaaacaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcct 16157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 18247087 - 18247143
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 18247143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 21265167 - 21265235
Alignment:
Q  199 gcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||  ||||||||||||||||||||||||||| | | |||||||||||||||| |||||||||||    
T  21265167 gcaattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcatt 21265235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 24547176 - 24547264
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||||| |||||||| || |||| |||||||| |||||||| |||||||||||| |||| ||| | |||||||||||||||| ||||||    
T  24547176 aggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaa 24547264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 35512154 - 35512222
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| | ||||| ||||    
T  35512154 aatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35512222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 5993879 - 5993946
Alignment:
Q  165 aataaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||  |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  5993879 aataaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 5993946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 6150452 - 6150511
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  6150452 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgta 6150511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 6301544 - 6301635
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||||||   |||||||| || |||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  6301544 aaggcttaaatatgtatttcatt--tgcaattatgg-tcgtttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcatt 6301635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 20840532 - 20840607
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||| | |||| ||||| ||||| ||||    
T  20840532 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaa 20840607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 3529270 - 3529196
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 3529196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 296
Target Start/End: Complemental strand, 11741944 - 11741817
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcattt 268  Q
    |||| |||||||||||||||| || ||||| ||||| ||||||||| ||||  |||||||| | ||| |||||||||||| ||||       ||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  269 aaaatttcatcatttgacctagttaatc 296  Q
    |||||||| || ||||||| ||||||||    
T  11741844 aaaatttcgtcctttgacccagttaatc 11741817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 18670198 - 18670259
Alignment:
Q  171 agaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  18670198 agaaggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgta 18670259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 20840866 - 20840773
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| | |||||| |||||||||||||||||||   |||| ||| | ||||| |||||||||  |||||||||||    
T  20840866 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcatt 20840773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 24141450 - 24141539
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    ||||||||||||||| |||| ||||||||||||   ||| ||||||||||||||| |||| ||||| ||||| ||||| |||| ||||||    
T  24141450 aaggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaa 24141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 40148896 - 40148973
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||||||| |||| ||||||||||||  | || |||||||||||||||||||| ||||| ||||| |||||    
T  40148896 aaggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaa 40148973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 11761747 - 11761823
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  11761747 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 11761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 20814564 - 20814512
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  20814564 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 20814512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 21265571 - 21265520
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggt 21265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 35920229 - 35920320
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||||||| |||  |  ||||| || ||||||||||||||||| ||||||||| | ||||||||||| |||| |||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcatt 35920320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 24547555 - 24547501
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||    
T  24547555 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 24547501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 27587148 - 27587222
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 27587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 27937054 - 27937145
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||  ||||||  ||||||  | |||||| | |||||||||||||||| |||||||||||    
T  27937054 aggcttaaatatgtatttcatccttgcaattaggggtgatttaaa--ttggtctctatattcgctaatccttgcaaactagccttgcaatcatt 27937145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 42067953 - 42067895
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  42067953 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgta 42067895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 5024440 - 5024395
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  5024440 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 5024395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 5835848 - 5835767
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||||||||||||||| |||||||| | || ||||||||||||||   |||||||| | ||||||||||| |||| ||||||    
T  5835848 aatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaa 5835767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 28771266 - 28771209
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| ||||||||||| |||| || ||||| ||||||||||||||||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgta 28771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 39453306 - 39453351
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  39453306 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 39453351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 13362650 - 13362599
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  13362650 aatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgta 13362599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 19892730 - 19892667
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||  |||| ||||| |||||    
T  19892730 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcct 19892667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 32242248 - 32242299
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  32242248 aatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgta 32242299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 40150244 - 40150173
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    ||||||||||||||| |||| ||| |||||||| ||||| ||| ||||||||||| |||| ||||| |||||    
T  40150244 aaggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcct 40150173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 10684359 - 10684274
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||  ||||||||| |||||||||||||||| | |  ||||||  | |||||||||||||||  |||||||||||    
T  10684359 aatatgtatttcatctttgcaattaaaggtcgtttaaaaattgattc-cgtattcactaatccttgcaaactagtcttgcaatcatt 10684274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 13962863 - 13962921
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| ||||| ||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  13962863 aggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgta 13962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 17202392 - 17202450
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||| ||||||| ||||| |||||||||| | |||||| ||||||||||||||||||||    
T  17202392 aaaacaaggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtc 17202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 27937421 - 27937379
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  27937421 aatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 35920612 - 35920555
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||   ||||||| ||||||||||||||||||||| ||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgta 35920555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 16082971 - 16083051
Alignment:
Q  169 aaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||| |||||||||||||||| | |||||| |||| ||||||||||| |||| |||| ||| | ||||| ||||    
T  16082971 aaagaagacttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaa 16083051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 5256437 - 5256383
Alignment:
Q  177 ctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||||||||| || ||| |||||||| |||||||||||||||||||| |||||    
T  5256437 ctttaatatgtatctcgtccttgcaatta-gggtcgtttaaaaattggtcaatgta 5256383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 30096970 - 30096912
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtat 233  Q
    ||||| |||| |||||||||||||| ||||| ||||| |||||||| |||||| |||||    
T  30096970 ggcttaaatacgtatttcatccctgtaattaggggtcatttaaaaaatggtccctgtat 30096912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 5835621 - 5835698
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||| ||||||||||||||   |  ||||| || |||||||||||||||| | |||||||||| ||| |||||||    
T  5835621 aaggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaa 5835698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 5255110 - 5255158
Alignment:
Q  261 aatcatttaaaatttcatcatttgacctagttaatcgatgtcacgtcac 309  Q
    |||||||||||||||| |||||||||| | ||||||  |||||||||||    
T  5255110 aatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcac 5255158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 24389215 - 24389121
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24389215 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcatt 24389121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 32298770 - 32298898
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||| ||||||||||| |||| |||||||| |||||||||||||| |||||| |||||||| | |||||||||||||||  |||||||||||    
T  32298770 aaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 32298869  T
Q  268 taaaatttcatcatttgacctagttaatc 296  Q
    ||||||||| |||||||||| | ||||||    
T  32298870 taaaatttcgtcatttgaccaacttaatc 32298898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 48788802 - 48788949
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||| |||||||||||||| | |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| ||||       ||||||    
T  48788802 aggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 48788901  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaatt 314  Q
    ||||||||||||||||||||| | ||||||  ||||||||||| ||||    
T  48788902 ttaaaatttcatcatttgaccaacttaatcagtgtcacgtcactaatt 48788949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 42019598 - 42019689
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcatt 42019689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 10936229 - 10936130
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||| |||||||||||||||| |||||||| |||| |||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  10936229 aaaaaaaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcatt 10936130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 17102418 - 17102325
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||| |||||||||||    
T  17102418 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcatt 17102325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 27396627 - 27396757
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatca 265  Q
    ||||||| |||||||||||||||| || ||||| ||| |||||||||||||||||||||||||| | |||||||||||||||  ||||       |||||    
T  27396627 aaggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 27396726  T
Q  266 tttaaaatttcatcatttgacctagttaatc 296  Q
    |||||||||||||||||||||| | ||||||    
T  27396727 tttaaaatttcatcatttgaccaacttaatc 27396757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 40380112 - 40380020
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcatt 40380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 27992130 - 27992044
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  27992130 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 27992044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 28469008 - 28469102
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| | |||||| | ||| |||||||||||| |||||||||||    
T  28469008 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcatt 28469102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 5457336 - 5457260
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  5457336 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaa 5457260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 6253870 - 6253776
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||| ||  |||||||||||    
T  6253870 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcatt 6253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 47945363 - 47945449
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||  |||||||  || |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  47945363 aatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcatt 47945449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 47950793 - 47950879
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||  |||||||  || |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  47950793 aatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcatt 47950879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 2640169 - 2640270
Alignment:
Q  166 ataaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatca 265  Q
    |||||| ||||||| |||||||||||||||| | |||||| ||||||||||||||||||| | |||||||| | ||||||||||| |||  |||||||||    
T  2640169 ataaaataaggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatca 2640268  T
Q  266 tt 267  Q
    ||    
T  2640269 tt 2640270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 17886919 - 17886831
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||||| |||||||||||||||| |||||||| || || ||||||||||| |||||||||||||| |||||||||||||| | ||||||    
T  17886919 aggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaa 17886831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 42362450 - 42362525
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| |||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||| |||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaa 42362525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 45011033 - 45010958
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| | ||||||||||    
T  45011033 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaa 45010958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 13386175 - 13386047
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatt 267  Q
    ||||| ||||||||||| || | |||||||| ||||||||||||||||||||| | |||||| | |||||||||||||||| ||||       |||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatt 13386076  T
Q  268 taaaatttcatcatttgacctagttaatc 296  Q
    |||||||| ||| ||||||| ||||||||    
T  13386075 taaaattttatcctttgacccagttaatc 13386047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 32053141 - 32053235
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| || ||||| ||||||||||||||| ||||| | ||| || | |||||||||||||||| |||||||||||    
T  32053141 aaggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtccctatatacgataatccttgcaaactagccttgcaatcatt 32053235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 43123175 - 43123253
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||  | ||||||||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaacta 43123253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 19204880 - 19204739
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc-------atttaaaat 273  Q
    |||||| |||| |||| | |||||| |||| |||||||||||||| |||||| ||| | |||||||||||||||| ||||||||       |||||||||    
T  19204880 aatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattatttaaaat 19204781  T
Q  274 ttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||||||| | ||||||  || |||||||| |||||    
T  19204780 ttcatcatttgaccaatttaatcactgccacgtcactaattt 19204739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 28469437 - 28469362
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  28469437 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 28469362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 13384495 - 13384589
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||| |||||||||||| || |||||||||||||||||||||||| |||||| ||||||| |||| ||| | ||||| |||||||| | ||||||    
T  13384495 aaaacaaggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaa 13384589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 315
Target Start/End: Original strand, 17885651 - 17885775
Alignment:
Q  198 tgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaatttcatcatttgacctag 290  Q
    |||||||| ||||||||||||||||||||| |||||||  | |||||||||||||||| ||||       |||||||||||||||| || ||||||| ||    
T  17885651 tgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccag 17885750  T
Q  291 ttaatcgatgtcacgtcaccaattt 315  Q
    ||||||  || |||||||| |||||    
T  17885751 ttaatcactgccacgtcactaattt 17885775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 18670291 - 18670217
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||||||||||| |||| |||||||| |||||||||||||| |||||| |||||||||| ||||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 18670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 20426759 - 20426697
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcg 236  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  20426759 aggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcg 20426697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 37657265 - 37657191
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| |||||||||||||||| |||||||| || |||||||||||||| ||| |||||||||| ||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatccttgcaa 37657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 28105500 - 28105561
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattc 235  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  28105500 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattc 28105561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 40379775 - 40379843
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||| | ||||||||||    
T  40379775 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaa 40379843  T

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Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 6571011 - 6571082
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| |||||    
T  6571011 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcct 6571082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 27397024 - 27396966
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  27397024 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 27396966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 17102013 - 17102094
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  17102013 aaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 17102094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 42731848 - 42731759
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    |||||| |||||||||||||||| || ||||| ||||||||||||||||| ||| | ||| || | |||||||||| ||||| |||||||    
T  42731848 aggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaat 42731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 296
Target Start/End: Complemental strand, 3914560 - 3914438
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------cattt 268  Q
    |||| ||||||||||||||    |||||||  |||||||||||| ||||||| |||||||| | |||||||||||||||| |||||||       |||||    
T  3914560 gcttaaatatgtatttcat----gcaattagaggtcgtttaaaa-ttggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 3914466  T
Q  269 aaaatttcatcatttgacctagttaatc 296  Q
    ||||||||||||||||||| | ||||||    
T  3914465 aaaatttcatcatttgaccaacttaatc 3914438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 29144411 - 29144359
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  29144411 aggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtc 29144359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 24388825 - 24388880
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcg 236  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||    
T  24388825 aatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcg 24388880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 10935794 - 10935868
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||| |||||||||||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 10935868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 19204486 - 19204552
Alignment:
Q  172 gaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||||| ||||||||||| |||| || ||||| ||||||||||||||||||||| |||| |||||    
T  19204486 gaaggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgtt 19204552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 30128767 - 30128701
Alignment:
Q  183 tatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||| | |||||||| || |||||||    
T  30128767 tatgtatttaatccttgcaattaagggtcgtttaaaaaatggtccctatattcgttaattcttgcaa 30128701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 34793902 - 34793956
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||| ||||||||||| |||||||||| || |||||||||||||||||||||    
T  34793902 aaggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtcc 34793956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 42731419 - 42731493
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||||||||| |||||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 42731493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 6253472 - 6253545
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 6253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 18086288 - 18086377
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    |||||||||||||| |||  ||| |||||||| | ||||||||||||||||||| ||||  || | ||||||||||| |||| |||||||    
T  18086288 aggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaat 18086377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 18087766 - 18087678
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    ||||||||||||| |||  ||| |||||||| ||||| ||||||||||||||  |||| ||| | ||||||||||| |||| |||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaat 18087678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 18855898 - 18855838
Alignment:
Q  393 atgtcatcttctcaaaagcttcactcctcttctcttctc-gcatcgc-acaccaccaccaa 451  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||    
T  18855898 atgtcatcttctcaaaaccttcactcctcttctcttctctgcatcacgacaccaccaccaa 18855838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 22871707 - 22871631
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||| |||| | | | ||||||||||    
T  22871707 aaggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaa 22871631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 23181421 - 23181365
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||| |||||||||||||||  |||||||| |||||||||||| |||||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgta 23181365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 30127439 - 30127514
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||  ||||||||||||| || ||||||||||||| |||||| |||| ||| ||||||||||    
T  30127439 aaggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaatt-gtccatatatttgttaatccttgcaa 30127514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 20425477 - 20425556
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    |||||| |||||||| |||||||||||||||| || || ||||||||||||| |||||| ||| | ||| | ||||||||    
T  20425477 aggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggcaaacta 20425556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 33808323 - 33808398
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| |||||||||||||| | || ||||| | ||||||||||||||||||  |||||||| | |||||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaa 33808398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 34799585 - 34799534
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||| ||||||||||| |||||||||| || |||||||||||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 34799534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 29141606 - 29141556
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    ||||||| |||||||||||||||| ||||||||  ||||||||||||||||    
T  29141606 aaggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 27991732 - 27991813
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| ||||||| ||||||||||| |||| |||||||| |||||||||| |||||| ||| |||| ||| | ||||| ||||    
T  27991732 aaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaa 27991813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 32299132 - 32299059
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| ||||||||||| |||| |||||||| | ||||||||||||||||||| |||| ||| | ||||| ||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 32299059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 42020019 - 42019975
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||    
T  42020019 aatatgtatttcatccttgcaattaggggttgtttaaaaattggt 42019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 1960302 - 1960227
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaac 251  Q
    |||| ||||||||||| |||||||||| || |||||| |||||| ||||||| || ||||  | ||||||||||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtccttgcattcactaatccttgcaaac 1960227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 18856082 - 18856019
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||| |||| | |||| |||||||||||| ||||| ||||||||||||||| |||| |||||    
T  18856082 ggctttgatatatgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgtt 18856019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 43266359 - 43266406
Alignment:
Q  261 aatcatttaaaatttcatcatttgacctagttaatcgatgtcacgtca 308  Q
    ||||||||||||||||||||||||||| | ||||||  ||||||||||    
T  43266359 aatcatttaaaatttcatcatttgaccaacttaatcactgtcacgtca 43266406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 18855409 - 18855479
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||||||||||| |||| ||||||||| || ||||| |||||||| |||||| | || ||||| |||||    
T  18855409 aggctttaatatgtttttcgtccctgcaaataggggtcatttaaaaaatggtccctataatcgttaatcct 18855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 15714730 - 15714669
Alignment:
Q  165 aataaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||||| |||||||| |||||| |||  ||||||||| || ||||| ||||||||||||||    
T  15714730 aataaaaaaaggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaattggtc 15714669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 32687395 - 32687472
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||||||| |||  ||| || ||||| ||||| ||||||| ||||||| |||| ||||| ||||| |||||    
T  32687395 aaggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaa 32687472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 37656858 - 37656903
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||    
T  37656858 aatatgtatttcatccttgcaattaggaatcgtttaaaaattggtc 37656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 10092297 - 10092221
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||||| |||| |||||| ||||| ||||| | ||||||| ||||| | || ||||| ||||| |||||    
T  10092297 aggctttaatatgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaa 10092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 315
Target Start/End: Original strand, 37895345 - 37895494
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatca 265  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||       |||||    
T  37895345 aaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 37895444  T
Q  266 tttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||||||| ||||||| | ||||||  || |||||||| |||||    
T  37895445 tttaaaatttcatcctttgaccaacttaatcactgccacgtcactaattt 37895494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 44045431 - 44045338
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  44045431 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 44045338  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 21370630 - 21370538
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| || |||||  |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcatt 21370538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 267
Target Start/End: Complemental strand, 36480154 - 36480054
Alignment:
Q  167 taaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcat 266  Q
    ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | |||||||||||||||| ||||||||||    
T  36480154 taaaaaaagacttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcat 36480055  T
Q  267 t 267  Q
    |    
T  36480054 t 36480054  T

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Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 25230096 - 25230190
Alignment:
Q  169 aaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat 263  Q
    ||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||    
T  25230096 aaagatggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaat 25230190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 44713801 - 44713887
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| || |||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  44713801 aatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcatt 44713887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 39498708 - 39498615
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  39498708 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcatt 39498615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 6588689 - 6588769
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  6588689 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgca 6588769  T

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Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 13692637 - 13692499
Alignment:
Q  186 gtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------catttaaaatttcat 278  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||       ||||||||||||| |    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgt 13692538  T
Q  279 catttgacctagttaatcgatgtcacgtcaccaatttac 317  Q
    | ||||||| | ||||||  ||||||||||| |||||||    
T  13692537 cctttgaccaacttaatcactgtcacgtcactaatttac 13692499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 36382557 - 36382466
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||  ||||||||    
T  36382557 aaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatc 36382466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 16099454 - 16099360
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||  | |||||||||||||||| |||||||||||    
T  16099454 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcatt 16099360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 36755518 - 36755424
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| | || ||| | |||||||||||||||| |||||||||||    
T  36755518 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcatt 36755424  T

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Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 10713151 - 10713062
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||   |||||||| | ||||||||||| |||| ||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatc 10713062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 34448224 - 34448131
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| || ||||||||||||| |||||||| |||| |||||||||||||||| | |||||||| |||||||||||||||  |||||||||||    
T  34448224 aggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcatt 34448131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 39423944 - 39423851
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||| | |||||||||||||||  |||||||||||    
T  39423944 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcatt 39423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 6658275 - 6658183
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| ||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||| || ||||||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcatt 6658183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 11163054 - 11163146
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||  ||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 11163146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 25231277 - 25231201
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  25231277 aggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaa 25231201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 2318940 - 2318846
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| | |||||| ||||||||||||||||||| |||||||||| |  || |||||||||||  |||||||||||    
T  2318940 aaggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatcatt 2318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 45556477 - 45556383
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| || ||||| ||||||||||||||||||||  |||||||| | ||| |||||||||||| |||||||||||    
T  45556477 aaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcatt 45556383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 15848517 - 15848424
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||| ||||||||||| |||||||| |||||||||||||||||||  ||||||||| | |||||||| ||||| | |||||||||||    
T  15848517 aggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcatt 15848424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 3555248 - 3555336
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||||  ||||| |||| |||| |||||    
T  3555248 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgca 3555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 9076495 - 9076403
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| || | |||||||| ||||||||||||||||||||   ||||||||| |||||||||||||||  |||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcatt 9076403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 44044107 - 44044206
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||  | ||||||| |||||| | ||| |||||||    
T  44044107 aaaacaaggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcatt 44044206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 3556437 - 3556351
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    ||||| |||||  ||||||||| |||||||| ||||||||||||||||||||  |||| ||||| |||||||||||||||| |||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgca 3556351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 6589789 - 6589724
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  6589789 aaggctataatatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgtt 6589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 28230174 - 28230092
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||| ||||||||||||||| |||| |||||| ||||| ||||| ||||||||||||||| |||| ||||| ||||| |||||    
T  28230174 aaaataaggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaa 28230092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 28228669 - 28228733
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||||||||||| |||| |||||||||||| ||||| ||||||||||||||| |||| |||||    
T  28228669 aggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgtt 28228733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 11163452 - 11163377
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  11163452 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 11163377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 15848086 - 15848145
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  15848086 aaggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgta 15848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 30729621 - 30729696
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| |||||||||||||||| ||||||||   ||||||||||||||||||| | |||||| | |||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaa 30729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 36479723 - 36479775
Alignment:
Q  181 aatatgtatttcatccct-gcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  36479723 aatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgta 36479775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 45556110 - 45556186
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| || |||||||||||||||||| |||| ||| | ||||| ||||    
T  45556110 aaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaa 45556186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 34447810 - 34447865
Alignment:
Q  172 gaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||    
T  34447810 gaaggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtcc 34447865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 39498317 - 39498384
Alignment:
Q  182 atatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||| |||| || ||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 39498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 308
Target Start/End: Complemental strand, 39936675 - 39936535
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||||||||||| |||| |||||||||||| | || |||| ||||||||||| |||| ||||| ||||| ||||| || | ||||       ||||||    
T  39936675 aggctttaatatgtgtttcgtccctgcaattaggcgtggttt-aaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcat 39936577  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtca 308  Q
    |||||||||| || ||||||| | |||||| ||| |||||||    
T  39936576 ttaaaatttcgtcctttgaccaatttaatcaatgccacgtca 39936535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 6657877 - 6657935
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| ||||||||||| |||| |||||||  ||||||||||||||||||||| ||||    
T  6657877 aggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgta 6657935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 6846782 - 6846852
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcc 243  Q
    |||||||| |||||| ||| |||||||||| || ||||| ||||||||||||||| || ||||||| ||||    
T  6846782 aaggcttttatatgtgtttaatccctgcaaataggggtcatttaaaaattggtccttgaattcgttaatcc 6846852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 43742105 - 43742047
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||| |||||||||||   |||| ||||||||||||||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgta 43742047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 11347516 - 11347613
Alignment:
Q  261 aatcatttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaatttacccttcctcttctcagaccattg-gaaaaagacaaaaatacc 357  Q
    |||||||||||||||| ||  |   |||| ||||||  || |||||| | ||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  11347516 aatcatttaaaatttcgtctctctccctaattaatcagtgccacgtcgctaatttacctctcctcttctcagaccattgagaaaaagacaaaaatacc 11347613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 36382160 - 36382213
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||| | |||||||||||||| |||||||| || ||||||||||||||||||    
T  36382160 aggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtcc 36382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 2318160 - 2318215
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||| |||||||||||||||| ||||||| ||||| ||||||||||||||| |||||    
T  2318160 gcttaaatatgtatttcatccttgcaatt-agggtagtttaaaaattggtctatgta 2318215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 10712731 - 10712775
Alignment:
Q  183 tatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||||||||||| |||||||| || ||||||||||||||||||    
T  10712731 tatgtatttcatccttgcaattagggttcgtttaaaaattggtcc 10712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 37895769 - 37895725
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||    
T  37895769 aatatgtatttcatccttgcaattatgggtcgtttaaaaaatggt 37895725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 6307145 - 6307071
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| |||||||||||||||  ||||||||  |||||||||||||||||||| | || ||||| |||||| ||||    
T  6307145 ggcttaaatatgtatttcatct-tgcaattagtggtcgtttaaaaattggtccctataatcgttaatccttacaaa 6307071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 39423515 - 39423566
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||| |||| ||||||||||| || ||||| ||||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtc 39423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 3653506 - 3653444
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    ||||||||| || | || |||||| ||||| ||||| |||||||||||||||||||| |||||    
T  3653506 gctttaatacgtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgtt 3653444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 39936491 - 39936453
Alignment:
Q  393 atgtcatcttctcaaaagcttcactcctcttctcttctc 431  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  39936491 atgtcatcttatcaaaaccttcactcctcttctcttctc 39936453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 44714189 - 44714132
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| ||||||| |||||||| |||||||| |||||||||||||||| |||| ||||    
T  44714189 aggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgta 44714132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 16099055 - 16099112
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| ||||||||||| || | |||||||| ||||| ||||||||||||||| ||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgta 16099112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 41587228 - 41587374
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc------- 260  Q
    |||||||||||| |  |||| |||| ||| |||||||||| ||| ||||||||||||||| |||| ||||| ||||| | ||| || | ||||           
T  41587228 aaaagaaggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgttt 41587326  T
Q  261 aatcatttaaaatttcatcatttgacctagttaatcgatgtcacgtca 308  Q
    ||||||||||||||||||| ||| ||| | ||||||  ||||||||||    
T  41587327 aatcatttaaaatttcatcctttaaccaacttaatcactgtcacgtca 41587374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 199016 - 199096
Alignment:
Q  170 aagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||| || ||||||| |||  |||||||||||| || || |||||||||| || | |||| ||||| |||||||||||    
T  199016 aagaaggtttaaatatgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcgttaatccttgcaaa 199096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 6367991 - 6367898
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 6367898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 17661848 - 17661943
Alignment:
Q  171 agaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  17661848 agaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc-tgtattcgctaatccttgcaaactagcattgcaatcatt 17661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 32917688 - 32917541
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------catt 267  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||       ||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatt 32917589  T
Q  268 taaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||||| ||||||| | ||||||  || |||||||| |||||    
T  32917588 taaaatttcatcctttgaccaacttaatcattgccacgtcactaattt 32917541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 46899061 - 46899153
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | || ||||||||||||| |||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcatt 46899153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 46900031 - 46899936
Alignment:
Q  172 gaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| |||||||||||    
T  46900031 gaaggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcatt 46899936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 315
Target Start/End: Complemental strand, 30711756 - 30711608
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------cat 266  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||| | |||||||||||||||| |||||||       |||    
T  30711756 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 30711657  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||| |||||||||| | ||||||  || |||||||| |||||    
T  30711656 ttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattt 30711608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 49723147 - 49723007
Alignment:
Q  182 atatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaatt 274  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| || |       ||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  275 tcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||||| ||||||| | ||||||  || |||||||| |||||    
T  49723047 tcatcctttgaccaacttaatcactgccacgtcactaattt 49723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 36694281 - 36694374
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||    
T  36694281 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcatt 36694374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 36710382 - 36710475
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||    
T  36710382 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcatt 36710475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 1103891 - 1103797
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  1103891 aaggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 1103797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 5735141 - 5735047
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||| | |||||||||||||||| || ||||||||    
T  5735141 aaggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcatt 5735047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 37578198 - 37578284
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| || ||||||||    
T  37578198 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcatt 37578284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 43759251 - 43759161
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||| | |||||||||||||||| ||||||||    
T  43759251 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatc 43759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 183221 - 183313
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| | |||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 183313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 24009575 - 24009667
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||  | |||||||| ||||||| |||||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcatt 24009667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 47999123 - 47999215
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| || |||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 47999215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 13914067 - 13914160
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||| | ||||||||||| |||  |||||||||||    
T  13914067 aggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcatt 13914160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 26024820 - 26024728
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | |||||||||||||||  |||||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcatt 26024728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 42533030 - 42533098
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  42533030 aatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaa 42533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 7821383 - 7821290
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||| ||||||||  ||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||  ||||||||||    
T  7821383 aaggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggt-catgtattcgctaatccttgcaaactagccgtgcaatcatt 7821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 48779549 - 48779455
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| | |||| ||||||||| ||||||||||| | | |||||||||||||||  |||||||||||    
T  48779549 aaggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcatt 48779455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 19322891 - 19322984
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |  ||||| |||||||||||||||| || |||||||||| | |||||||||||||| | |||||||||||    
T  19322891 aggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcatt 19322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 35473630 - 35473723
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| |||||||||| ||| |||||||    
T  35473630 aggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcatt 35473723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 31197065 - 31197171
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc--aatcatttaaaa 272  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||| |||  |||||||||| ||||| | ||| || | ||||  ||||||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgcataatcatttaaaa 31197164  T
Q  273 tttcatc 279  Q
    |||||||    
T  31197165 tttcatc 31197171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 34850493 - 34850418
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaa 34850418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 40435351 - 40435418
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgca 248  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||| |||||||||    
T  40435351 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttgca 40435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 1841880 - 1841795
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| || ||| | ||||||||||||||||| ||| |||||||| | |||||||||||||||| |||||||||||    
T  1841880 aatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaactagc-ttgcaatcatt 1841795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 23209368 - 23209453
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||  | | | |||||||| |||||||||||||||| |||||||||||    
T  23209368 aatatgtatttcatccttgcaatta-gggtcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatcatt 23209453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 32132297 - 32132379
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||||||||||| |||| ||||| ||||||  |||| |||||||||| ||||||||| ||||| |||||||||||    
T  32132297 aaaagaaggctttaatatgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaa 32132379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 40210376 - 40210462
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||  |||||||| | |||||||||||||||  |||||||||||    
T  40210376 aatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcatt 40210462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 34464449 - 34464506
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgta 34464506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 25647882 - 25647958
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  25647882 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 25647958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 40772889 - 40772813
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| |||||||||||||||| |||||||| ||||||||| ||||| ||||| |||||||| | ||||||||||    
T  40772889 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatccttgcaa 40772813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 19018058 - 19017983
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||| | ||||| ||||    
T  19018058 aggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaa 19017983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 23209756 - 23209681
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  23209756 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 23209681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 34849011 - 34849086
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||| |||||||| | |||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaa 34849086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 41099155 - 41099014
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaat 273  Q
    |||||||||||||||| | ||||||  |||||||||||||||||||  |||||||| | |||||||||||||| | || |       |||||||||||||    
T  41099155 aatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaaat 41099056  T
Q  274 ttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||| |||||||||| | ||||||  ||||| ||||| |||||    
T  41099055 ttcgtcatttgaccaacttaatcactgtcatgtcactaattt 41099014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 4960931 - 4960845
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||| |  |||||||  ||||||||||||||||||||  ||||||| | |||||||||||||||| |||||||||||    
T  4960931 aatatgtttttcatactagcaattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcatt 4960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 6367562 - 6367636
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 6367636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 17691212 - 17691294
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||| |||||||||||||||||||| ||| | ||| || ||||||||||||||||||||| |||| ||| | |||||||||||    
T  17691212 aaaaaaaggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaa 17691294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 19017627 - 19017721
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| |||| |||||||||||| |   |||||||| | |||||| ||||||||  |||||||||||    
T  19017627 aaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatcatt 19017721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 19323314 - 19323228
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||| | || ||||| || ||||||||||||| || |||||||||| | |||||||||||||| | |||||||||||    
T  19323314 aatatgtatttcattcttgtaattatggatcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcatt 19323228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 34464878 - 34464820
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  34464878 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgta 34464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 35152757 - 35152625
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatttaaaattt 275  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||| |||  |||||||| | |||||||||    | ||||  |||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgca----atcatt--aatcatttaaaattt 35152664  T
Q  276 catcatttgacctagttaatcgatgtcacgtcaccaatt 314  Q
    | || ||||||| | ||||||  |||||| |||| ||||    
T  35152663 cgtcctttgaccaacttaatcactgtcacatcactaatt 35152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 37578627 - 37578570
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||    
T  37578627 aaaagaaggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggt 37578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 40439611 - 40439539
Alignment:
Q  181 aatatgtatttcatccctgcaattaa-gggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||| | ||||||||||||||    
T  40439611 aatatgtatttcatccttgcaattaatgggtcgtttaaaaattgat-catgtattcgctaatccttgcaaacta 40439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 40772507 - 40772564
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgta 40772564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 48691171 - 48691240
Alignment:
Q  198 tgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||| ||||||||||||||||||||  |||||||||| || ||||||||||| | |||||||||||    
T  48691171 tgcaattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcatt 48691240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 5734009 - 5734084
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| |||||||||||| ||| |||||||| ||||||||||||||||||| |||||| ||| | |||||||||||    
T  5734009 aggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttgcaaa 5734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 17692607 - 17692527
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||| |||  ||| | ||||||||||| |||| |||||    
T  17692607 aatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgca 17692527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 19515818 - 19515870
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  19515818 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 19515870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 4960541 - 4960614
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| |||||||||||||||  |||||||| ||||||||||||||||| ||  |||||||| | ||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaa 4960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 13914494 - 13914421
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||| |||||||||||||||| ||||||||  ||| ||||||||||||||||||||| ||| | ||||| ||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaa 13914421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 26024417 - 26024474
Alignment:
Q  169 aaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||||||||| ||||||||||| || | |||||||| ||||||||||||||||||||    
T  26024417 aaagaaggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtc 26024474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 35152342 - 35152395
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||| |||||||||||||||| ||||||||  ||||||||||||||||||||    
T  35152342 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcc 35152395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 17662280 - 17662228
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    ||||||| |||||||||||||||| |||||||  |||||||||||||||||||    
T  17662280 aaggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggt 17662228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 41098732 - 41098784
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  41098732 aggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtc 41098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 42534437 - 42534366
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||  |||||||||| ||| ||||||||||    
T  42534437 aatatgtatttcatctctacaatta-gggtcgtttaaaaattagtctctgtattcgttaatctttgcaaacta 42534366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 13300340 - 13300257
Alignment:
Q  167 taaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| || |||| |||||||||||||||  |||||||| | ||||||||||||||||||  |||||||  | |||||||||||    
T  13300340 taaaaaaatgcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaa 13300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 46163036 - 46163087
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  46163036 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgta 46163087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 7231679 - 7231585
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| || ||||| | ||||||||||||||| ||  ||||||| || ||| || ||||||||| ||| |||||||    
T  7231679 aaggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgtattcattaatctttacaaactagctttgtaatcatt 7231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 35038464 - 35038530
Alignment:
Q  184 atgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||| |||| ||| |||||||||||||| ||||||||||| |||||||| ||||| ||||| |||||    
T  35038464 atgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaa 35038530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 47999521 - 47999463
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| ||||||||||| |||| || ||||| ||||||||||||||||||||| ||||    
T  47999521 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgta 47999463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 51019779 - 51019725
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||| |||||||| || |||||||||| || |||||||||||||||||||||    
T  51019779 aaggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtcc 51019725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 42248479 - 42248524
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||    
T  42248479 aatatgtatttcatccttgcaattagtggtcgtttaaaaattggtc 42248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 51015632 - 51015685
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||| |||||||| || |||||||||| || |||||||||||||||||||||    
T  51015632 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtcc 51015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 7820952 - 7821024
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcctt 245  Q
    ||||||| |||||||||||||||| |||||||| ||||| ||||| |||| |||| |||| ||| | ||||||    
T  7820952 aaggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatcctt 7821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 14878980 - 14879028
Alignment:
Q  184 atgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||| |||| |||||||| ||||||||||||||||||| ||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgta 14879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 30711327 - 30711375
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    ||||| |||||||||||||||| |||||||| |||| ||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 36694677 - 36694625
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||||| |||||||| | || |||||||||||||||    
T  36694677 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtc 36694625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 36710778 - 36710726
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||||| |||||||| | || |||||||||||||||    
T  36710778 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtc 36710726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaatt 222  Q
    ||||| ||||| |||||||||| |||||||| ||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 14879386 - 14879253
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatttaaaatt 274  Q
    ||||| ||||| |||||||||  |||||||| || |||||||||||||||||  | |||||| | |||||||||    | ||||  ||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatccttgca----accatt--aatcatttaaaatt 14879293  T
Q  275 tcatcatttgacctagttaatcgatgtcacgtcaccaatt 314  Q
    || || ||||||| | ||||||  || |||||||| ||||    
T  14879292 tcgtcctttgaccaacttaatcactgccacgtcactaatt 14879253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 24009976 - 24009918
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||| |||| || ||| |||||||||||| |||||||| || |||||||||||||||||    
T  24009976 aaaaaaaggtttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtc 24009918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 32133353 - 32133271
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagg-gtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagc 255  Q
    |||||||||||||| |||||| |||||||||| || ||| |||||||||| |||| |||| ||||| ||| | ||||| ||||    
T  32133353 aggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagc 32133271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 40210792 - 40210747
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||||||||||||  |||||||| ||| ||||||||||||||||    
T  40210792 aatatgtatttcatcattgcaattaggggccgtttaaaaattggtc 40210747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 42267303 - 42267372
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||| |||||| |||  ||||||||| || ||||| ||||||||||||||| ||||||| || |||||    
T  42267303 ggcttttatatgtgtttattccctgcaaataggggtcatttaaaaattggtccctgtattctttaatcct 42267372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 183621 - 183545
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaaggg-tcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| || ||||| ||| |||||||||||||||||| |||| ||| | ||||| ||||    
T  183621 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaa 183545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 1841458 - 1841510
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| || |||||||||||   |||||||||| ||||||||||||||||||    
T  1841458 aggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtc 1841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 26234478 - 26234430
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    ||||| ||||||||||| |||||||||| || |||||| ||||||||||    
T  26234478 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 44522146 - 44522222
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| | ||||| |||| |||||||||||| || || |||||||||||| || |||| ||||| ||||| |||||    
T  44522146 aggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaa 44522222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 315
Target Start/End: Original strand, 11434808 - 11434949
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcatttaaaat 273  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||       |||||||||||||    
T  11434808 aatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcatttaaaat 11434907  T
Q  274 ttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||| || ||||||| ||||||||  || |||||||| |||||    
T  11434908 ttcgtcctttgacccagttaatcactgccacgtcactaattt 11434949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 3059686 - 3059592
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  3059686 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 3059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 679864 - 679958
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  679864 aaggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcatt 679958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 21627711 - 21627805
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||    
T  21627711 aaggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcatt 21627805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 30726197 - 30726095
Alignment:
Q  165 aataaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    |||||||  |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| ||| ||||    
T  30726197 aataaaaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatc 30726098  T
Q  265 att 267  Q
    |||    
T  30726097 att 30726095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 33517964 - 33517870
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | ||||||||||| |||| |||||||||||    
T  33517964 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcatt 33517870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 13379911 - 13379818
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| | || ||||||||||||| |||||||||||    
T  13379911 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcatt 13379818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 33647380 - 33647287
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||| | |||||||||||    
T  33647380 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcatt 33647287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 681157 - 681064
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  681157 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcatt 681064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 30804283 - 30804197
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||| | || ||||||||||||| |||||||||||    
T  30804283 aatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcatt 30804197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 12081065 - 12080972
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| | |||||||||||||| |||| |||||||| | |||||||||||||||  |||||||||||    
T  12081065 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 12080972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 20651009 - 20651102
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| ||||||||||||| || |||||||||||||||| | |||||||| | |||||||||||| ||| |||||||||||    
T  20651009 aggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcatt 20651102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 26463178 - 26463254
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||    
T  26463178 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaa 26463254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 30337846 - 30337754
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||| |||| ||| | |||||||||||||||| |||||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcatt 30337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 15116660 - 15116573
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||||||  ||| ||| | |||||||||||||||| ||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaa 15116573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 17734194 - 17734288
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||| | |||| | | | |||||||||||||||| |||||||||||    
T  17734194 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcatt 17734288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 20652077 - 20651986
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    ||||||| ||||||||||| || |||||||||| ||||||||||||||||| ||| |||||||  | |||||||||||| ||| ||||||||    
T  20652077 aaggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatc 20651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 11393234 - 11393140
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| | |||||||||||||  || ||||| |||||||||||||||||||||  ||||||| | |||||||||||||||  |||||||||||    
T  11393234 aaggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcatt 11393140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 8089441 - 8089518
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||| |||||||||| | |||||||||||| ||||||||||||||||||||| | || ||||| |||||||||||    
T  8089441 aaggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaa 8089518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 8090356 - 8090280
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||  | |||||||||||    
T  8090356 aggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaa 8090280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 15115339 - 15115426
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaa 262  Q
    ||||| |||||||||||||||| ||||||||  | |||||||||||||||||| | || ||||| ||||||||||| |||| ||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaa 15115426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 26464627 - 26464553
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| |||||| ||| ||||| ||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaa 26464553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 12408600 - 12408524
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||| |||||||||||||||| | |||||| |||| |||||||| ||||||| |||||||| | |||||||||||    
T  12408600 aggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaa 12408524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 12407508 - 12407579
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttg 246  Q
    ||||| |||||||||||||||| | ||||||||| |||||||||||||||||  |||||||| | |||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttg 12407579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 21628143 - 21628084
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| |||||||||||||||| |||||||| |||||| |||||||||||||| ||||    
T  21628143 aaggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgta 21628084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 28498454 - 28498375
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    |||||||||||||| |||| |||||||||||| || || ||||||||||||||| |||| ||| | ||||| ||||||||    
T  28498454 aggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaacta 28498375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 30337448 - 30337523
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  30337448 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 30337523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 3059263 - 3059331
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| ||||||||||||||||||||||  | ||||||||| ||| | ||||| ||||    
T  3059263 aatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaa 3059331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 29810865 - 29810807
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||||| |||| |||||||||||| || || ||||||||||||||| ||||    
T  29810865 aggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgta 29810807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 13378527 - 13378599
Alignment:
Q  177 ctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||  ||||||||| || ||||| |||||||| |||||| |||||| ||| ||||| ||||    
T  13378527 ctttaatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaa 13378599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 17734590 - 17734534
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||| ||||||||||| |||| | |||||| ||||||||||||||||| ||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgta 17734534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 22617872 - 22617932
Alignment:
Q  165 aataaaagaaggctttaa-tatgtatttcatccctgcaattaagggtcgtttaaaaattgg 224  Q
    |||||||||| | ||||| |||||||||||||| |||||||| | ||||||||||||||||    
T  22617872 aataaaagaaaggtttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgg 22617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 30803867 - 30803935
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| ||||| || | ||||||||||||||| || ||||| ||||| ||||| ||||    
T  30803867 aatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaa 30803935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 33517540 - 33517608
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||||||||||||| || ||||| || |||||||||||||||||| |||| ||| | ||||| ||||    
T  33517540 aatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaa 33517608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 12080646 - 12080693
Alignment:
Q  185 tgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  12080646 tgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgta 12080693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 30725760 - 30725810
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaatta-gggtcgtttaaaaattggtc 30725810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 148184 - 148091
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||  |||||||||||    
T  148184 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcatt 148091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 10781913 - 10781820
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  10781913 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcatt 10781820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 51692948 - 51692855
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  51692948 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 51692855  T

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Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 336
Target Start/End: Complemental strand, 1179230 - 1179060
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------ca 265  Q
    ||||||| ||||||||||| |||  |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||       ||    
T  1179230 aaggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 1179131  T
Q  266 tttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaatttacccttcctcttctcagacca 336  Q
    |||||||||||||| ||| ||| | ||||||  || ||| ||||||  |||||| ||||| ||||||||||    
T  1179130 tttaaaatttcatcctttaaccaacttaatcactgccacatcaccagattacccctcctcatctcagacca 1179060  T

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Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 10780711 - 10780805
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||    
T  10780711 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcatt 10780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 10974320 - 10974414
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||    
T  10974320 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcatt 10974414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 315
Target Start/End: Complemental strand, 24711509 - 24711361
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------cat 266  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||       |||    
T  24711509 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcat 24711410  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||||||||| |||||||||| | ||||||  || |||||||| |||||    
T  24711409 ttaaaatttcgtcatttgaccaatttaatcactgccacgtcactaattt 24711361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 24349673 - 24349766
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  24349673 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 24349766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 24411777 - 24411684
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| | |||||||||||||| | |||||||||||    
T  24411777 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaaactaaccttgcaatcatt 24411684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 34765379 - 34765472
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||| |||||||||||    
T  34765379 aggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcatt 34765472  T

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Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 50418667 - 50418760
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||    
T  50418667 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcatt 50418760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 147319 - 147411
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| | |||||||||||||||  |||||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 147411  T

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Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 43155535 - 43155618
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatc 264  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||||    
T  43155535 aatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 43155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 55867543 - 55867464
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaacta 253  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  55867543 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaacta 55867464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 13058412 - 13058318
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||| | ||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  13058412 aaggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 13058318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 18831745 - 18831617
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaat-------catt 267  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | ||| |||||||||| | |||||||       ||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcatt 18831646  T
Q  268 taaaatttcatcatttgacctagttaatc 296  Q
    |||||||||||||||||||| | ||||||    
T  18831645 taaaatttcatcatttgaccaacttaatc 18831617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 24350862 - 24350768
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| || ||||| | |||||||||||||||| |||||||||||    
T  24350862 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcatt 24350768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 35028004 - 35028090
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| | |||||||| | |||||||||||||||| |||||||||||    
T  35028004 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcatt 35028090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 39539347 - 39539219
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||||| |||| ||||       ||||||    
T  39539347 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcat 39539248  T
Q  267 ttaaaatttcatcatttgacctagttaat 295  Q
    |||||||||| || ||||||| |||||||    
T  39539247 ttaaaatttcgtcctttgacccagttaat 39539219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 52909682 - 52909589
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||| |||||||| || || |||||||||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  52909682 aggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcatt 52909589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 7452231 - 7452139
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcatt 7452139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 15507674 - 15507765
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | |||||||||||||||   ||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcatt 15507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 46661344 - 46661250
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||   | ||||| |||||||||| |||||||||||    
T  46661344 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcatt 46661250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 49879208 - 49879299
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| | | | |||||||||||||||| |||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcatt 49879299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 11108262 - 11108176
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| |||||||| || |||||||||||||| ||| |||||||| | |||||||||||||||  |||||||||||    
T  11108262 aatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcatt 11108176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 37248627 - 37248541
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | |||||||||||||||  |||||||||||    
T  37248627 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcatt 37248541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 44967075 - 44967161
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||| | |||||| ||||||||| |||||||||||    
T  44967075 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcatt 44967161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 36008843 - 36008936
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| ||||||||||| |||| || ||||| || |||||||||||||||||| |||||||| | ||| |||||||||||| |||||||||||    
T  36008843 aggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcatt 36008936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 5369295 - 5369203
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||||||||| |||| |  || || ||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcatt 5369203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 315
Target Start/End: Original strand, 17355923 - 17356072
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatca 265  Q
    ||||||| |||||||||||||||| |||||||| | |||||||||||||||||   |||||||| | ||| |||||||||||  ||||       |||||    
T  17355923 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaatca 17356022  T
Q  266 tttaaaatttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    ||||||||||| |||||||||| | ||||||  || |||||||| |||||    
T  17356023 tttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattt 17356072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 23613706 - 23613616
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatca 265  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||| ||| |||||||| | ||||||||||| |||  |||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatca 23613616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 48528478 - 48528560
Alignment:
Q  168 aaaagaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||| ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||||  |||||||||||    
T  48528478 aaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaaa 48528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 53702228 - 53702093
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatttaaaa 272  Q
    ||||||| |||||||||||||||  ||||||||  ||| |||||||||||||| |||||||||||| || ||||||    | ||||  ||||||||||||    
T  53702228 aaggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggt-catgtattcgttaattcttgca----atcatt--aatcatttaaaa 53702136  T
Q  273 tttcatcatttgacctagttaatcgatgtcacgtcaccaattt 315  Q
    |||| |||||||||| | |||||| ||| |||||||| |||||    
T  53702135 tttcgtcatttgaccaacttaatcaatgccacgtcactaattt 53702093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 40387465 - 40387542
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||||||| ||||||||||||||||| ||| | ||||||||||||||| |||||||| | ||||| |||||    
T  40387465 aaggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaa 40387542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 7451833 - 7451908
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  7451833 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 7451908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 23613307 - 23613366
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  23613307 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgta 23613366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 54435526 - 54435439
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgca 261  Q
    |||||| |||||||||||| | | |||||||| | ||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||    
T  54435526 aggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgca 54435439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 35028430 - 35028352
Alignment:
Q  171 agaaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||| |||||||||||||||| |||||||| ||||  ||||||||||||||||| | |||| | ||||||||||    
T  35028430 agaaggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaa 35028352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 37976159 - 37976245
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||| | |||||||| | ||| |||||||||||  |||||||||||    
T  37976159 aatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcatt 37976245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 40388536 - 40388482
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||    
T  40388536 aaggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtcc 40388482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 1178055 - 1178130
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| |||||||||||||||| || |||||  |||||||||||||||||| |||||||||| | ||||||||||    
T  1178055 aaggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggt-catgtattcgctaatccttgcaa 1178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 24711109 - 24711185
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  24711109 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 24711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 41582446 - 41582522
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||||| ||||||||||||||| | ||||| ||||||||||||||| | || ||||| ||||| |||||    
T  41582446 aggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaa 41582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 54086701 - 54086765
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcctt 245  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||  |||||||| | ||||||    
T  54086701 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 54086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 17356344 - 17356289
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcg 236  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||    
T  17356344 aatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcg 17356289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 34765809 - 34765734
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||| |||||| ||| | ||||| ||||    
T  34765809 aggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaa 34765734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 55866111 - 55866161
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 55866161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 11448159 - 11448082
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||||||||||| ||  |||| ||| | |||||||||||    
T  11448159 aaggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaa 11448082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 14801734 - 14801787
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  14801734 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtc 14801787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 41583660 - 41583611
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  41583660 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattg 41583611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 50419066 - 50419013
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtcc 227  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||||    
T  50419066 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 50419013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 1178177 - 1178237
Alignment:
Q  393 atgtcatcttctcaaaagcttcactcctcttctcttctc-gcatcgc-acaccaccaccaa 451  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||    
T  1178177 atgtcatcttctcaaaaccttcactcctcttctcttctctgcatcacgacaccaccaccaa 1178237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 5368945 - 5369021
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| ||||||||||| |||| |||||||| || |||||||||||||||||| |||| ||| | ||||| ||||    
T  5368945 aaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaa 5369021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 13058036 - 13058088
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  13058036 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 13058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 14802163 - 14802071
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||| |||||||||| ||||||||  | |||||||||||||||||| |||||||| | || || ||||||||   |||||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcatt 14802071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 32063766 - 32063714
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  32063766 aaggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggt 32063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 53129936 - 53129860
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||| |||||||||||||||| |||||| | ||||||||||||||||| |||  ||| ||| | ||||||||||    
T  53129936 aaggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaa 53129860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 18831347 - 18831406
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||| ||||||||||| |||| | |||||| ||||||||||||||||||||| ||||    
T  18831347 aaggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgta 18831406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 29321334 - 29321283
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggt 225  Q
    |||||||||||||| |||| ||| |||||||||||||| |||||||||||||    
T  29321334 aggctttaatatgtgtttcgtccttgcaattaagggtcatttaaaaattggt 29321283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 43155925 - 43155850
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| |  ||||| ||||||||||||||||||||| |||| ||||| ||||| ||||    
T  43155925 aggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 43155850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 44967467 - 44967392
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    |||||| ||||||||||| |||| ||||||||  |||||||||||||||||||| |||| ||| | ||||| ||||    
T  44967467 aggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 44967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 15508094 - 15508052
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  15508094 aatatgtatttcatccttgcaattaggggtcgtttaaaaattg 15508052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 51692552 - 51692610
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||||||| ||||||||  |||||||||||||||| || |||||    
T  51692552 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgta 51692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 11446268 - 11446345
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||| ||||||||| |||| ||||||||||||  |||| ||||||||||||| |||| | ||||| ||||| |||||    
T  11446268 aaggcattaatatgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaa 11446345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 30642576 - 30642527
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaatt 222  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||||||    
T  30642576 aaggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaatt 30642527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 54087117 - 54087060
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtt 238  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||| |||| |||||    
T  54087117 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgtt 54087060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 16006215 - 16006151
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcctt 245  Q
    ||||||||||| || | |||||||| ||||||||||||||||||||  |||||||| | ||||||    
T  16006215 aatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 30641520 - 30641593
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    ||||||||||||| |||| ||||| |||||| ||||| |||||||||| |||  |||| ||||| |||||||||||    
T  30641520 ggctttaatatgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaa 30641593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 37248242 - 37248310
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||||| | || |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  37248242 aatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 37248310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 54713661 - 54713721
Alignment:
Q  207 gggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||||||||  ||  |||||||| | |||||||||||||||| |||||||||||    
T  54713661 gggtcgtttaaaaattaatctctgtattcgctaatccttgcaaactagccttgcaatcatt 54713721  T

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Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 24411364 - 24411415
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||||||||||||  ||||||| |||| |||||||||||||||| ||||    
T  24411364 aatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgta 24411415  T

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Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 36009243 - 36009172
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaaggg-tcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    |||||| ||||||||||| |||| || ||||| ||| |||||||||||||||||| |||| ||||| |||||    
T  36009243 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcct 36009172  T

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Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 53129504 - 53129598
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgttt-aaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||  |||||||| || |||||| |||||||||| |||||||| | | |||||| ||||||||  |||||||||||    
T  53129504 aaggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggt-catgtatttgctaatccttacaaactagtcttgcaatcatt 53129598  T

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Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 37976582 - 37976524
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| |||||||||||||||   ||||||| ||||||||||||||||| ||| ||||    
T  37976582 aggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgta 37976524  T

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Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 52909254 - 52909304
Alignment:
Q  176 gctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||| |||||||||||||||  |||||||| |||||||| |||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtc 52909304  T

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Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 53701818 - 53701860
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattg 223  Q
    ||||| |||||||||| |||||||| |||||||||||||||||    
T  53701818 aatatctatttcatccttgcaattaggggtcgtttaaaaattg 53701860  T

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Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 32062589 - 32062646
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||||||||||| |||  |||||| ||||| ||||| ||||||||||||||| ||||    
T  32062589 ggctttaatatgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgta 32062646  T

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Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 35508669 - 35508621
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaatt 222  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||||||    
T  35508669 aggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

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Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 54713606 - 54713646
Alignment:
Q  165 aataaaagaaggctttaatatgtatttcatccctgcaatta 205  Q
    ||||||| ||||||| |||||||||||||||| ||||||||    
T  54713606 aataaaaaaaggcttaaatatgtatttcatccttgcaatta 54713646  T

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Target: scaffold0707 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 6509 - 6415
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | ||||||||||| |||| |||||||||||    
T  6509 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcatt 6415  T

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Target: scaffold0775 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 308
Target Start/End: Original strand, 4961 - 5102
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgc-------aatcat 266  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||||| ||| | |||||| | |||||||||||||||| ||||       ||||||    
T  4961 aggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcat 5060  T
Q  267 ttaaaatttcatcatttgacctagttaatcgatgtcacgtca 308  Q
    |||||||||| || ||||||||| ||||||| || |||||||    
T  5061 ttaaaatttcgtcctttgacctaattaatcgctgccacgtca 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 5147 - 5183
Alignment:
Q  395 gtcatcttctcaaaagcttcactcctcttctcttctc 431  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5147 gtcatcttctcaaaaccttcactcctcttctcttctc 5183  T

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Target: scaffold0031 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 69393 - 69301
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| |||||||||||||||| ||||||||   ||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatt 69301  T

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Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 68965 - 69022
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgta 69022  T

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Target: scaffold0075 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 14428 - 14521
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    |||||| |||||||||||||||  |||||||| | |||||||||||||| ||| || |||||| | |||||||||||||||| |||||||||||    
T  14428 aggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcatt 14521  T

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Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 14818 - 14767
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtc 14767  T

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Target: scaffold0020 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 140063 - 139977
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||||||| |||| |||||||| |||| |||||||||||||||| |||||||  | || ||||||||||||| |||||||||||    
T  140063 aatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcatt 139977  T

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Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 139678 - 139746
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| |||| ||| | ||||| ||||    
T  139678 aatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 139746  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 2171 - 2077
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||| || | | | | ||| |||||||||| | |||||||||||    
T  2171 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcatt 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 1768 - 1826
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgta 232  Q
    |||||| ||||||||||| |||| |||||||| |||||||| |||||||||||| ||||    
T  1768 aggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgta 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 19863 - 19932
Alignment:
Q  181 aatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaa 250  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||| |||  ||| | |||||||||||    
T  19863 aatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaa 19932  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 37993 - 37940
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    ||||||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  37993 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtc 37940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 37564 - 37656
Alignment:
Q  175 ggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaaactagcattgcaatcatt 267  Q
    ||||| ||||| |||||||||| ||||||||  | |||||||||||||||||| |||||||| | || || ||||||||   |||||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcatt 37656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 24776 - 24700
Alignment:
Q  173 aaggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatccttgcaa 249  Q
    ||||||||||||||| |||||||||||||  || ||||| ||||||||||||||| | |||| ||| ||||| ||||    
T  24776 aaggctttaatatgtttttcatccctgcatataggggtcatttaaaaattggtccttatatttgttaatcctggcaa 24700  T

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Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 23230 - 23300
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtccatgtattcgtttatcct 244  Q
    ||||||| |||||| |||| ||||||||| || | ||| |||||||||||||| ||||||| ||| |||||    
T  23230 aggctttgatatgtgtttcgtccctgcaaatatgagtcatttaaaaattggtctatgtatttgttaatcct 23300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 2558 - 2506
Alignment:
Q  174 aggctttaatatgtatttcatccctgcaattaagggtcgtttaaaaattggtc 226  Q
    |||||| |||||||||||||| | |||||||| || |||||| ||||||||||    
T  2558 aggcttaaatatgtatttcattcttgcaattagggatcgttttaaaattggtc 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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