View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9222_low_8 (Length: 356)
Name: NF9222_low_8
Description: NF9222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9222_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 44705921 - 44706260
Alignment:
| Q |
1 |
ataagtaataatacatcttcataaatgttcatccatgtttcataactgttagacaacttttacattacatcactataacaataaacaagaatcgtcctca |
100 |
Q |
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| T |
44705921 |
ataagtaataatacatcttcataaatgttcatccatgtttcataactgttagacaacttttacattacatcactataacaataaacaagaatcgtcctca |
44706020 |
T |
|
| Q |
101 |
cacaaaaaattgagatttgaatgaagactgactatattactaagcaaaactaaatcaatgcaactgtactcataatgttaaggattgagatttgagaatg |
200 |
Q |
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| T |
44706021 |
cacaaaaaattgagatttgaatgaagactgactatataactaagcaaaactaaatcaatgcaactgtactcataatgttaaggattgagatttgagaatg |
44706120 |
T |
|
| Q |
201 |
aactcaagtctcatataatcccaaacctactatcatcacttgatttaacaggctcttttggagaagtacttccaactgaaggtttctcagagtgtatatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
44706121 |
aactcaagtctcatataatcccaaacctactatcatcacttgatttaacaggatcttttggagaagtatttccaactgaaggtttctcagagtgtatatg |
44706220 |
T |
|
| Q |
301 |
tgacaattcatcaactacatctttcctttcactgtaaatg |
340 |
Q |
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||||||||||||||||||||| |||||||||||||||||| |
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| T |
44706221 |
tgacaattcatcaactacatccttcctttcactgtaaatg |
44706260 |
T |
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