View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9223_low_24 (Length: 330)

Name: NF9223_low_24
Description: NF9223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9223_low_24
NF9223_low_24
[»] chr1 (57 HSPs)
chr1 (225-316)||(36636911-36637002)
chr1 (1-85)||(22826750-22826834)
chr1 (7-87)||(40196844-40196924)
chr1 (1-88)||(6238339-6238426)
chr1 (18-88)||(6237970-6238040)
chr1 (11-88)||(19863167-19863244)
chr1 (1-84)||(47377850-47377936)
chr1 (11-86)||(40073083-40073158)
chr1 (1-58)||(5222709-5222766)
chr1 (1-88)||(38871156-38871244)
chr1 (6-84)||(7171757-7171835)
chr1 (1-63)||(47086304-47086366)
chr1 (3-87)||(29413365-29413450)
chr1 (1-58)||(39649116-39649173)
chr1 (5-84)||(21428063-21428143)
chr1 (1-88)||(38870950-38871038)
chr1 (1-56)||(15391763-15391818)
chr1 (1-63)||(803494-803556)
chr1 (1-63)||(10017355-10017417)
chr1 (1-58)||(15391834-15391891)
chr1 (6-63)||(40073527-40073584)
chr1 (1-58)||(43361584-43361641)
chr1 (1-58)||(52846881-52846938)
chr1 (6-58)||(39648910-39648962)
chr1 (1-56)||(1233941-1233996)
chr1 (1-56)||(11590435-11590490)
chr1 (1-87)||(13959417-13959504)
chr1 (1-83)||(42845027-42845110)
chr1 (1-58)||(2697363-2697420)
chr1 (1-58)||(4022157-4022214)
chr1 (1-58)||(11581770-11581827)
chr1 (1-58)||(11595245-11595302)
chr1 (1-54)||(15392040-15392093)
chr1 (1-62)||(20429002-20429063)
chr1 (2-63)||(20429262-20429323)
chr1 (9-58)||(21428299-21428348)
chr1 (1-88)||(25799135-25799224)
chr1 (1-58)||(29273257-29273314)
chr1 (1-58)||(43361789-43361846)
chr1 (1-58)||(43423294-43423351)
chr1 (2-58)||(21538966-21539022)
chr1 (2-58)||(48558353-48558409)
chr1 (1-56)||(2997295-2997350)
chr1 (3-70)||(29413159-29413226)
chr1 (1-52)||(30958677-30958728)
chr1 (8-59)||(35892043-35892094)
chr1 (1-64)||(42844841-42844904)
chr1 (6-61)||(45395572-45395627)
chr1 (5-49)||(2120059-2120104)
chr1 (1-58)||(17419802-17419859)
chr1 (1-58)||(38474298-38474355)
chr1 (1-54)||(40642812-40642865)
chr1 (1-58)||(40664225-40664282)
chr1 (39-84)||(47086127-47086172)
chr1 (11-59)||(6705312-6705360)
chr1 (10-62)||(28119770-28119822)
chr1 (6-42)||(45982202-45982238)
[»] chr8 (41 HSPs)
chr8 (1-88)||(43901019-43901106)
chr8 (2-88)||(3895147-3895233)
chr8 (1-88)||(25186787-25186874)
chr8 (1-87)||(15968067-15968153)
chr8 (11-88)||(16051256-16051333)
chr8 (11-88)||(25186549-25186626)
chr8 (1-84)||(3895394-3895477)
chr8 (1-58)||(33435898-33435955)
chr8 (1-88)||(41456324-41456408)
chr8 (1-57)||(18313799-18313855)
chr8 (1-84)||(8056243-8056326)
chr8 (1-87)||(15968189-15968275)
chr8 (1-59)||(5720898-5720956)
chr8 (1-87)||(15968431-15968517)
chr8 (1-58)||(33435694-33435751)
chr8 (1-58)||(43599326-43599383)
chr8 (1-53)||(8056524-8056576)
chr8 (1-58)||(3183943-3184000)
chr8 (1-58)||(8559596-8559653)
chr8 (1-58)||(10989273-10989330)
chr8 (1-58)||(15011061-15011118)
chr8 (1-58)||(40902425-40902482)
chr8 (1-58)||(42228786-42228843)
chr8 (1-57)||(35561681-35561737)
chr8 (1-87)||(20760662-20760749)
chr8 (22-89)||(22188959-22189026)
chr8 (1-58)||(4195982-4196039)
chr8 (1-58)||(15010853-15010910)
chr8 (1-58)||(16454667-16454724)
chr8 (1-58)||(34248092-34248149)
chr8 (1-63)||(39705738-39705803)
chr8 (8-58)||(10989066-10989116)
chr8 (30-86)||(15967835-15967888)
chr8 (8-58)||(34248381-34248431)
chr8 (22-88)||(41456510-41456575)
chr8 (1-58)||(18905871-18905928)
chr8 (1-58)||(21085180-21085237)
chr8 (1-58)||(21653819-21653876)
chr8 (1-54)||(26122780-26122833)
chr8 (1-58)||(45122326-45122382)
chr8 (40-87)||(30066036-30066084)
[»] chr7 (58 HSPs)
chr7 (1-88)||(33833965-33834052)
chr7 (5-87)||(29646083-29646165)
chr7 (1-88)||(31357675-31357764)
chr7 (1-86)||(30768433-30768518)
chr7 (1-84)||(10903490-10903573)
chr7 (1-72)||(33834170-33834241)
chr7 (1-80)||(29645830-29645909)
chr7 (6-87)||(7832965-7833047)
chr7 (1-59)||(22841067-22841125)
chr7 (1-87)||(33855706-33855793)
chr7 (1-84)||(38948419-38948502)
chr7 (1-90)||(16564909-16564999)
chr7 (1-90)||(16600663-16600753)
chr7 (1-88)||(4258001-4258089)
chr7 (1-53)||(10903314-10903366)
chr7 (1-88)||(16565113-16565201)
chr7 (1-88)||(16600461-16600549)
chr7 (1-56)||(2232111-2232166)
chr7 (1-58)||(2179669-2179727)
chr7 (1-87)||(24377847-24377933)
chr7 (1-58)||(6782841-6782898)
chr7 (1-58)||(6783053-6783110)
chr7 (1-58)||(9379015-9379072)
chr7 (1-58)||(49040581-49040638)
chr7 (1-84)||(5266374-5266458)
chr7 (1-61)||(47856020-47856080)
chr7 (3-58)||(29252593-29252648)
chr7 (1-87)||(39808466-39808553)
chr7 (1-87)||(39808599-39808686)
chr7 (1-42)||(23390605-23390646)
chr7 (1-58)||(31374780-31374837)
chr7 (1-58)||(35866671-35866728)
chr7 (1-88)||(4258205-4258293)
chr7 (1-56)||(13310251-13310309)
chr7 (7-58)||(36492575-36492626)
chr7 (1-56)||(40703893-40703948)
chr7 (2-61)||(43167922-43167981)
chr7 (2-52)||(33855497-33855547)
chr7 (1-58)||(1661223-1661280)
chr7 (1-58)||(7135275-7135332)
chr7 (1-58)||(14691087-14691144)
chr7 (1-58)||(37272077-37272134)
chr7 (1-42)||(48114012-48114053)
chr7 (12-83)||(34590554-34590626)
chr7 (7-58)||(29780168-29780219)
chr7 (1-51)||(9378808-9378858)
chr7 (4-58)||(23396627-23396681)
chr7 (1-59)||(31149072-31149130)
chr7 (1-59)||(31167364-31167422)
chr7 (1-55)||(40121974-40122028)
chr7 (1-58)||(36092631-36092688)
chr7 (1-58)||(43288279-43288336)
chr7 (1-58)||(43288547-43288604)
chr7 (1-58)||(43384312-43384369)
chr7 (1-49)||(8681899-8681947)
chr7 (3-59)||(24426770-24426825)
chr7 (5-37)||(42068639-42068671)
chr7 (7-63)||(42556108-42556164)
[»] chr4 (72 HSPs)
chr4 (2-88)||(14115493-14115579)
chr4 (3-88)||(3640223-3640308)
chr4 (6-88)||(41743556-41743638)
chr4 (117-178)||(18335579-18335640)
chr4 (1-88)||(8304957-8305044)
chr4 (1-88)||(45684176-45684263)
chr4 (1-88)||(45684391-45684478)
chr4 (1-88)||(47491848-47491935)
chr4 (5-88)||(14115747-14115830)
chr4 (1-88)||(3640471-3640560)
chr4 (1-58)||(7892684-7892741)
chr4 (1-88)||(42561867-42561955)
chr4 (1-84)||(53863920-53864004)
chr4 (1-82)||(9758319-9758400)
chr4 (5-84)||(10390480-10390560)
chr4 (8-87)||(56511319-56511399)
chr4 (1-87)||(10390678-10390765)
chr4 (1-54)||(8560007-8560060)
chr4 (1-58)||(23350814-23350871)
chr4 (1-58)||(25753637-25753694)
chr4 (1-58)||(43943688-43943745)
chr4 (1-58)||(49380912-49380969)
chr4 (1-84)||(14945158-14945242)
chr4 (1-84)||(22865784-22865868)
chr4 (8-87)||(56511526-56511606)
chr4 (3-58)||(4905537-4905592)
chr4 (1-87)||(29113464-29113551)
chr4 (1-63)||(14944909-14944971)
chr4 (1-63)||(50307291-50307353)
chr4 (1-58)||(4645867-4645924)
chr4 (1-58)||(5488382-5488439)
chr4 (1-58)||(12016715-12016772)
chr4 (1-58)||(12016923-12016980)
chr4 (1-58)||(15665168-15665225)
chr4 (1-58)||(39110922-39110979)
chr4 (5-58)||(49380679-49380732)
chr4 (1-58)||(53720702-53720759)
chr4 (1-59)||(5065868-5065926)
chr4 (1-43)||(28497261-28497303)
chr4 (1-55)||(52810660-52810714)
chr4 (1-58)||(990562-990619)
chr4 (1-58)||(23018485-23018542)
chr4 (1-58)||(27634358-27634415)
chr4 (1-58)||(43972370-43972427)
chr4 (1-54)||(49544347-49544400)
chr4 (1-58)||(51469496-51469553)
chr4 (5-58)||(52827264-52827317)
chr4 (1-57)||(28246008-28246064)
chr4 (3-58)||(22867101-22867156)
chr4 (7-58)||(53738240-53738291)
chr4 (2-84)||(10390300-10390379)
chr4 (1-58)||(34206025-34206083)
chr4 (1-58)||(34206287-34206345)
chr4 (8-58)||(52214637-52214687)
chr4 (1-58)||(991219-991276)
chr4 (1-58)||(5212033-5212090)
chr4 (5-42)||(7198034-7198071)
chr4 (1-58)||(7806427-7806483)
chr4 (1-70)||(21647601-21647670)
chr4 (5-58)||(28395197-28395249)
chr4 (1-58)||(29669395-29669452)
chr4 (1-58)||(39110732-39110789)
chr4 (1-58)||(40716668-40716725)
chr4 (2-43)||(42312846-42312887)
chr4 (5-58)||(43972058-43972111)
chr4 (1-58)||(45426968-45427025)
chr4 (1-58)||(48843049-48843106)
chr4 (1-58)||(53740197-53740254)
chr4 (2-58)||(12879300-12879356)
chr4 (1-57)||(17077177-17077233)
chr4 (5-57)||(33797142-33797194)
chr4 (7-47)||(40197229-40197269)
[»] chr3 (82 HSPs)
chr3 (1-88)||(26926922-26927009)
chr3 (1-88)||(39269515-39269602)
chr3 (1-82)||(40927045-40927126)
chr3 (1-88)||(39018792-39018879)
chr3 (1-88)||(40926469-40926556)
chr3 (6-89)||(40926801-40926884)
chr3 (1-84)||(32034106-32034189)
chr3 (9-88)||(37039985-37040064)
chr3 (1-63)||(40926718-40926780)
chr3 (6-88)||(44367599-44367681)
chr3 (11-84)||(39269070-39269143)
chr3 (3-87)||(44367795-44367879)
chr3 (5-84)||(19984657-19984736)
chr3 (5-84)||(42637749-42637832)
chr3 (1-58)||(54495546-54495603)
chr3 (8-87)||(35011679-35011759)
chr3 (8-87)||(35011886-35011966)
chr3 (6-58)||(50338414-50338466)
chr3 (1-84)||(39268883-39268966)
chr3 (1-87)||(50203859-50203946)
chr3 (1-63)||(29763723-29763785)
chr3 (1-59)||(35015500-35015558)
chr3 (1-59)||(44145152-44145210)
chr3 (3-57)||(46509637-46509691)
chr3 (4-57)||(16078896-16078949)
chr3 (22-87)||(20737242-20737307)
chr3 (1-58)||(25578713-25578769)
chr3 (6-51)||(26915136-26915181)
chr3 (1-58)||(49477549-49477606)
chr3 (1-58)||(50692541-50692598)
chr3 (1-77)||(32515920-32515996)
chr3 (1-87)||(4029646-4029733)
chr3 (1-84)||(19984175-19984257)
chr3 (1-87)||(21832693-21832780)
chr3 (8-58)||(49477349-49477399)
chr3 (1-58)||(4191154-4191211)
chr3 (1-58)||(9264118-9264175)
chr3 (1-58)||(11414379-11414435)
chr3 (1-58)||(22339756-22339813)
chr3 (1-58)||(35358485-35358542)
chr3 (1-58)||(40230671-40230728)
chr3 (2-63)||(44461304-44461365)
chr3 (1-58)||(50692338-50692395)
chr3 (1-58)||(51642667-51642724)
chr3 (1-88)||(19820529-19820616)
chr3 (2-58)||(39078803-39078859)
chr3 (2-58)||(53639997-53640053)
chr3 (22-89)||(19984414-19984481)
chr3 (1-56)||(21832233-21832288)
chr3 (1-56)||(34992884-34992939)
chr3 (1-55)||(9180383-9180437)
chr3 (3-61)||(53761427-53761485)
chr3 (1-58)||(9264325-9264382)
chr3 (1-54)||(9264536-9264589)
chr3 (7-64)||(31801751-31801808)
chr3 (1-58)||(32215562-32215619)
chr3 (1-58)||(37223590-37223647)
chr3 (1-58)||(39956706-39956763)
chr3 (1-58)||(40230467-40230523)
chr3 (1-58)||(42258925-42258982)
chr3 (1-62)||(44461095-44461156)
chr3 (1-58)||(51338473-51338530)
chr3 (5-58)||(51642460-51642513)
chr3 (1-58)||(53640204-53640261)
chr3 (1-58)||(53780112-53780169)
chr3 (1-53)||(34992592-34992644)
chr3 (5-84)||(35358670-35358750)
chr3 (5-56)||(5440631-5440682)
chr3 (3-46)||(19841507-19841550)
chr3 (20-63)||(33799153-33799196)
chr3 (46-88)||(26927151-26927193)
chr3 (1-58)||(24860093-24860150)
chr3 (1-58)||(26366746-26366803)
chr3 (1-58)||(27219344-27219401)
chr3 (1-58)||(39956499-39956556)
chr3 (1-58)||(43101403-43101460)
chr3 (1-58)||(47833694-47833751)
chr3 (1-54)||(54369054-54369107)
chr3 (1-58)||(54591497-54591554)
chr3 (1-41)||(13897863-13897903)
chr3 (4-44)||(18356350-18356390)
chr3 (1-53)||(27177427-27177479)
[»] chr2 (53 HSPs)
chr2 (1-88)||(39386685-39386773)
chr2 (1-89)||(17264975-17265064)
chr2 (6-88)||(10485214-10485296)
chr2 (1-63)||(29676309-29676371)
chr2 (7-88)||(36264155-36264237)
chr2 (1-58)||(12431913-12431970)
chr2 (1-87)||(3435488-3435575)
chr2 (1-88)||(4721807-4721893)
chr2 (1-59)||(6986447-6986505)
chr2 (1-58)||(883633-883690)
chr2 (1-58)||(27545148-27545205)
chr2 (1-58)||(31761346-31761403)
chr2 (1-58)||(32667198-32667255)
chr2 (1-59)||(29676167-29676223)
chr2 (1-56)||(29695373-29695428)
chr2 (1-85)||(8044549-8044635)
chr2 (1-55)||(36264086-36264140)
chr2 (5-58)||(6986376-6986429)
chr2 (1-58)||(12432120-12432177)
chr2 (1-58)||(17727419-17727476)
chr2 (1-58)||(20999021-20999078)
chr2 (1-58)||(31761147-31761204)
chr2 (1-58)||(32810908-32810965)
chr2 (1-58)||(33986007-33986064)
chr2 (2-58)||(7257640-7257696)
chr2 (7-63)||(17265218-17265274)
chr2 (1-88)||(18607255-18607342)
chr2 (117-178)||(26615731-26615785)
chr2 (1-58)||(884072-884129)
chr2 (1-58)||(2464619-2464676)
chr2 (1-58)||(18901896-18901953)
chr2 (1-58)||(19860052-19860109)
chr2 (1-58)||(25621317-25621374)
chr2 (5-58)||(32666996-32667049)
chr2 (1-58)||(34775372-34775429)
chr2 (29-84)||(39108398-39108454)
chr2 (1-44)||(12419853-12419896)
chr2 (7-58)||(32975272-32975323)
chr2 (1-55)||(936827-936881)
chr2 (1-58)||(33985803-33985858)
chr2 (28-58)||(38020967-38020997)
chr2 (1-58)||(3976503-3976560)
chr2 (1-58)||(6183398-6183455)
chr2 (1-58)||(7877859-7877916)
chr2 (1-58)||(13839291-13839348)
chr2 (1-58)||(16006992-16007049)
chr2 (1-50)||(19859940-19859989)
chr2 (7-87)||(22447326-22447407)
chr2 (1-58)||(29684026-29684083)
chr2 (1-58)||(39108103-39108160)
chr2 (2-58)||(883866-883922)
chr2 (6-58)||(10849523-10849575)
chr2 (1-57)||(43169257-43169313)
[»] chr5 (45 HSPs)
chr5 (1-88)||(4563693-4563780)
chr5 (1-84)||(18873200-18873283)
chr5 (1-71)||(39268033-39268103)
chr5 (1-58)||(38376746-38376803)
chr5 (1-58)||(28358067-28358124)
chr5 (1-62)||(29008087-29008148)
chr5 (1-58)||(35527020-35527077)
chr5 (1-58)||(43490288-43490345)
chr5 (1-88)||(39268241-39268329)
chr5 (1-87)||(2716358-2716445)
chr5 (1-56)||(17135534-17135589)
chr5 (1-87)||(30592443-30592529)
chr5 (1-87)||(37781846-37781933)
chr5 (1-58)||(48136-48193)
chr5 (1-58)||(2908594-2908651)
chr5 (1-58)||(3762921-3762978)
chr5 (1-58)||(18914193-18914250)
chr5 (1-58)||(18914400-18914457)
chr5 (1-58)||(30330664-30330721)
chr5 (1-58)||(36878341-36878398)
chr5 (1-58)||(37656764-37656821)
chr5 (1-58)||(38131779-38131836)
chr5 (1-57)||(36307956-36308011)
chr5 (7-58)||(48343-48394)
chr5 (7-58)||(13413605-13413656)
chr5 (1-88)||(21019872-21019959)
chr5 (1-59)||(11632446-11632504)
chr5 (1-59)||(30870916-30870974)
chr5 (1-58)||(873728-873785)
chr5 (7-59)||(10668381-10668433)
chr5 (2-58)||(34457112-34457168)
chr5 (1-57)||(43490496-43490552)
chr5 (1-87)||(1028095-1028182)
chr5 (1-56)||(15510538-15510593)
chr5 (1-87)||(40168861-40168948)
chr5 (1-43)||(8812701-8812743)
chr5 (1-59)||(18107848-18107906)
chr5 (1-55)||(22196588-22196642)
chr5 (1-59)||(32501226-32501284)
chr5 (1-58)||(2908801-2908858)
chr5 (1-58)||(34457318-34457375)
chr5 (1-58)||(37995666-37995723)
chr5 (1-58)||(40169073-40169130)
chr5 (1-57)||(3015654-3015710)
chr5 (2-58)||(15287069-15287125)
[»] chr6 (35 HSPs)
chr6 (1-86)||(19291921-19292007)
chr6 (1-88)||(26394566-26394653)
chr6 (1-87)||(26098357-26098444)
chr6 (1-63)||(25998832-25998894)
chr6 (1-87)||(24558803-24558890)
chr6 (1-87)||(25999038-25999125)
chr6 (1-87)||(26098769-26098856)
chr6 (1-58)||(28149808-28149865)
chr6 (1-55)||(25184018-25184072)
chr6 (1-58)||(3713213-3713270)
chr6 (1-58)||(5269305-5269362)
chr6 (1-58)||(11313414-11313471)
chr6 (1-58)||(15101143-15101200)
chr6 (1-58)||(16877042-16877099)
chr6 (10-63)||(26098572-26098625)
chr6 (1-58)||(30539250-30539307)
chr6 (3-59)||(21110003-21110059)
chr6 (1-87)||(24558598-24558685)
chr6 (12-58)||(29742468-29742514)
chr6 (1-58)||(31905-31962)
chr6 (5-58)||(16876862-16876915)
chr6 (1-58)||(19712436-19712493)
chr6 (3-87)||(19712611-19712696)
chr6 (1-58)||(23591544-23591601)
chr6 (1-58)||(25184225-25184282)
chr6 (1-87)||(12134485-12134572)
chr6 (7-58)||(29256474-29256525)
chr6 (7-49)||(4654558-4654600)
chr6 (34-84)||(5592664-5592714)
chr6 (1-46)||(2902835-2902879)
chr6 (1-58)||(6623457-6623514)
chr6 (1-58)||(8144032-8144089)
chr6 (1-58)||(10418370-10418427)
chr6 (9-58)||(10733470-10733519)
chr6 (1-58)||(19054508-19054565)
[»] scaffold0153 (1 HSPs)
scaffold0153 (117-178)||(2071-2132)
[»] scaffold1138 (2 HSPs)
scaffold1138 (5-58)||(2111-2164)
scaffold1138 (1-58)||(1905-1962)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-58)||(76867-76924)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-87)||(13321-13408)
scaffold0434 (2-58)||(13529-13585)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-88)||(21264-21352)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-87)||(2949-3036)
[»] scaffold1112 (1 HSPs)
scaffold1112 (6-58)||(1267-1319)


Alignment Details
Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 36636911 - 36637002
Alignment:
Q  225 tattctaaacataaaatacacctactcaatcaatcaacttattttaatcctatttttaccaatgttggtatgccttcagctgatactgatgt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  36636911 tattctaaacataaaatacacctactcaatcaatcaacttattttactcctatttttaccaatgttggtatgccttcagctgatacttatgt 36637002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22826834 - 22826750
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttagg 85  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||    
T  22826834 catcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatcagttagg 22826750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 40196924 - 40196844
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||| |||||| |||||||||||||||    
T  40196924 atagataagactcttgataagagtttatatagaggagacaatcctcactttagaaactggtttttaaggatgagttaggcc 40196844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6238426 - 6238339
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||  |||||| ||||||||||| ||||    
T  6238426 catcagatagataagactcctgataagagtttatatagaggaggcaatcctcaccttatgaaccggtttttaaggatgagttatgcct 6238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 6238040 - 6237970
Alignment:
Q  18 tcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  6238040 tcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcct 6237970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 19863167 - 19863244
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||||||| |||||| | ||||||||||||||    
T  19863167 ataagactcttgataagagtttatatagaggaagcaatcctcaccttatgaactggtttttaacgatgagttaggcct 19863244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 47377850 - 47377936
Alignment:
Q  1 catcggatagataagactcttgataaaa---gtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||    
T  47377850 catcggatagataagactcttgataataatagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgaattag 47377936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 40073083 - 40073158
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggc 86  Q
    |||||||||||| ||| ||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  40073083 ataagactcttggtaagagtttatatagaggagacaatctccaccttatgaaccggtttttgaggatgagttaggc 40073158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5222709 - 5222766
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  5222709 catctgatagataagactcttgataagagtttatgtagaggagacaatcctcacctta 5222766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38871244 - 38871156
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcct 88  Q
    |||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||  ||||| | |||||| |||||||||    
T  38871244 catcagatagataagactcttgataaaagtttataaagaggaggcactcctcaccttaagaaccggttttgtaaggatgcgttaggcct 38871156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 7171757 - 7171835
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |||    ||||| ||||||||||||    
T  7171757 gatatataagactcttggtaaaagtttatatagaggagacaattctcaccttaagaatcaatttttaaggatgagttag 7171835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47086366 - 47086304
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||    
T  47086366 catcagatagataagactcttgataagagtttatatacatgagacactcctcaccttatgaac 47086304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 29413365 - 29413450
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||| ||||||||||||||||||| |||||||| ||||||| || |||||||||||||| |  ||||| | |||||||||||||||    
T  29413365 tcgggtagataagactcttgataagagtttataaagaggaggcactcctcaccttatgagccagttttgtaaggatgagttaggcc 29413450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39649173 - 39649116
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  39649173 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 39649116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 21428143 - 21428063
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||  |||  ||||| ||||||||||||||    
T  21428143 ggatagataagactcttgataagagtttatataaaggtgacaatccttaccttacaaaccggttttgtgaggatgagttag 21428063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38871038 - 38870950
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcct 88  Q
    |||| ||| |||||||||||||||||||||||||| || |||| || ||||||||||| ||||  ||||| | ||||||||||||||||    
T  38871038 catcagatcgataagactcttgataaaagtttataaagtggaggcactcctcaccttaagaaccggttttgtaaggatgagttaggcct 38870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15391763 - 15391818
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||||||||||||||| |||||| |||| ||||||| ||||||||||||    
T  15391763 catcggatagataagactcttgagaaaagtatataaagaggaggcaatcctcacct 15391818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 803556 - 803494
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||| |||| |||||| |||| ||| ||||||||||||||||||||||||||| |||||||||    
T  803556 catcagatatataagattcttaatagaagtttatatagaggagacaatcctcatcttatgaac 803494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10017417 - 10017355
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  || ||||||||||||||||    
T  10017417 catcagatagataagactcttgataagagtttataaagaggaagcactcctcaccttatgaac 10017355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15391834 - 15391891
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  15391834 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 15391891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 40073527 - 40073584
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||||||    
T  40073527 gatagattagactcttagtaagagtttatatagaggagacaatccccaccttatgaac 40073584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43361641 - 43361584
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  43361641 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 43361584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52846938 - 52846881
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  52846938 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 52846881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 39648962 - 39648910
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  39648962 gatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 39648910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1233941 - 1233996
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    |||||||||||| ||||||||||| | |||||||| |||||||||| |||||||||    
T  1233941 catcggatagatgagactcttgatgagagtttataaagaggagacactcctcacct 1233996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11590435 - 11590490
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||    
T  11590435 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacct 11590490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13959417 - 13959504
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| || |||||||| |||||| |||||  ||||||||  | || | ||||| |||||||||||||||    
T  13959417 catcggatagataagactcttgagaagagtttataaagaggatacaattttcaccttacaagctggttttttaaggatgagttaggcc 13959504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42845110 - 42845027
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagtta 83  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  || | |||| |||||||||| ||||| | |||||||||||    
T  42845110 catcagatagataagactcttgataagagtttataaagaggatgcacttctcatcttatgaactagttttataaggatgagtta 42845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2697420 - 2697363
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  2697420 catcggatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 2697363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4022214 - 4022157
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  4022214 catcggatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 4022157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11581770 - 11581827
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||| ||| | |||| ||||||| ||||| ||||||||    
T  11581770 catcggatagataagactcttgatgaaaatatataaagaggaggcaatcatcacctta 11581827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11595245 - 11595302
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || |||||||||||||||||| ||| ||||||  ||||||||||    
T  11595245 catcggatagataggagtcttgataaaagtttataaagacgagacacgcctcacctta 11595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15392040 - 15392093
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||    
T  15392040 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcac 15392093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20429063 - 20429002
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaa 62  Q
    ||||||||| |||||||||||||||| |||||||| ||||||  || | |||||||||||||    
T  20429063 catcggatacataagactcttgataatagtttataaagaggaagcatttctcaccttatgaa 20429002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 20429323 - 20429262
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||| ||||||||||||||||| |||||||| ||||||  || || |||||||||||||    
T  20429323 atcggatggataagactcttgataagagtttataaagaggaagcactcatcaccttatgaac 20429262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 21428348 - 21428299
Alignment:
Q  9 agataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  21428348 agataagattcttgataagagtttatacagaggagacaatccttacctta 21428299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25799135 - 25799224
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta-tgaacttgtttt-tgaggatgagttaggcct 88  Q
    |||| ||||||||| |||||||| || |||||||| ||||| | ||||||||||||||  ||||| ||||| | ||||||||||||||||    
T  25799135 catcagatagataaaactcttgagaagagtttataaagagggggcaatcctcaccttacagaactggttttgtaaggatgagttaggcct 25799224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29273314 - 29273257
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| || |||| ||||||||||||||    
T  29273314 catcggatagacaagactcttgagaagagtttataaaggggaggcaatcctcacctta 29273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43361846 - 43361789
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||  ||||||||||||||    
T  43361846 catcggatagacaagactcttgagaagagtttataaagaggaagcaatcctcacctta 43361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43423294 - 43423351
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| |||||||| || |||||||| ||||||| || |||||||||||    
T  43423294 catcggatagataacactcttgagaagagtttataaagaggaggcactcctcacctta 43423351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21539022 - 21538966
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||| ||||||||||||| || | |||||| ||||||| ||||||||||||||    
T  21539022 atcggataaataagactcttgagaagaatttataaagaggaggcaatcctcacctta 21538966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 48558409 - 48558353
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||| || ||| |||| ||||||  ||||||||||||||    
T  48558409 atcggatagataagactcttgagaagagtatataaagaggaagcaatcctcacctta 48558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2997350 - 2997295
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||||||||||||||| || ||| |||| ||| ||| ||||||||||||    
T  2997350 catcggatagataagactcttgagaagagtatataaagatgaggcaatcctcacct 2997295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 29413159 - 29413226
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt 70  Q
    |||| ||||||||||||||||||| |||||||| |||||| ||| || ||| ||||||| || |||||    
T  29413159 tcgggtagataagactcttgataagagtttataaagaggaaacactcttcatcttatgagctggtttt 29413226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30958677 - 30958728
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctc 52  Q
    ||||||||| |||||||| ||||||| |||||||||| || |||||||||||    
T  30958677 catcggatatataagacttttgataatagtttatataaagaagacaatcctc 30958728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 35892043 - 35892094
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||||| ||||||||||| |||||||| ||||||| || ||||||||||||    
T  35892043 tagataaaactcttgataagagtttataaagaggaggcactcctcaccttat 35892094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42844904 - 42844841
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaact 64  Q
    |||||||||||||| |||||| |||| |||||||| ||| || ||| | |||||||||||||||    
T  42844904 catcggatagataatactctttataagagtttatagagatgatacacttctcaccttatgaact 42844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 45395572 - 45395627
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatga 61  Q
    ||||||||||||||||||||| ||||||||  |||||| || ||||||| ||||||    
T  45395572 gatagataagactcttgataagagtttataatgaggaggcactcctcacgttatga 45395627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 2120059 - 2120104
Alignment:
Q  5 ggatagataagactcttgataaaagtttat-atagaggagacaatc 49  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  2120059 ggataaataagactcttgataaatgtttataatagaggagacaatc 2120104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17419802 - 17419859
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  17419802 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 17419859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38474298 - 38474355
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || |||||| || |||||||| ||||||| || |||||||||||    
T  38474298 catcggatagataggattcttgacaagagtttataaagaggaggcactcctcacctta 38474355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40642865 - 40642812
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    ||||||||||||| || |||||| || |||||||| |||||||||| |||||||    
T  40642865 catcggatagataggattcttgagaagagtttataaagaggagacactcctcac 40642812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40664225 - 40664282
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||| |||||||||||| |||||||| ||||||| || ||||| |||||    
T  40664225 catcggttagataggactcttgataagagtttataaagaggaggcactcctcgcctta 40664282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 47086172 - 47086127
Alignment:
Q  39 aggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    ||||| |||||||||||||||||||  |||||| ||||||||||||    
T  47086172 aggaggcaatcctcaccttatgaaccggtttttaaggatgagttag 47086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 6705312 - 6705360
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||| |||||||||||||||||||||| | |||||| || |||||||||    
T  6705312 ataaaactcttgataaaagtttatataaaagagacattcatcaccttat 6705360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 28119822 - 28119770
Alignment:
Q  10 gataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaa 62  Q
    ||||||||||||||||| |||||||| |||| || || | |||||||||||||    
T  28119822 gataagactcttgataagagtttataaagagtagccatttctcaccttatgaa 28119770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 45982202 - 45982238
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagagga 42  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  45982202 gatagataaaactcttgataaaagtttataaagagga 45982238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43901106 - 43901019
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  43901106 catcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcct 43901019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 3895147 - 3895233
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||    
T  3895147 atcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaactggttttcaaggatgagttaggcct 3895233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25186787 - 25186874
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||| ||| ||||||||||||    
T  25186787 catcggatagataagactcttgataaaagtttatatagaggagacaatcatcatcttatgaaccggtttttaaggttgagttaggcct 25186874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15968153 - 15968067
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||    
T  15968153 catcagattgataagactcttgataagagtttatataaaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcc 15968067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 16051333 - 16051256
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||    
T  16051333 ataagactcttgataagagtttatatagaggagacactcctcaccttatgaattggtttttaaggatgagttaggcct 16051256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 25186549 - 25186626
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  25186549 ataagactctttgtaaaagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcct 25186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3895394 - 3895477
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||   ||||| ||||||||||||    
T  3895394 catcggatagataagactcttgataagaatttatatagagaaggcaatcctcaccttatgaaccgatttttaaggatgagttag 3895477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33435898 - 33435955
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  33435898 catcggatagataagactcttgataagagtttatataaaggagacaatcctcacctta 33435955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41456408 - 41456324
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||   || |||||| ||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||||    
T  41456408 catcggatagataa---tcctgataagagtttatatagaggagacaatcctcacctgatgaaccggtttttaaggatgagttaggcct 41456324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18313799 - 18313855
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18313799 catcggatagataagactcttgttaaaagtttatatagaggaggcaatcctcacctt 18313855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8056326 - 8056243
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||  | | || ||||||||||||    
T  8056326 catcggaaagataagactcttgataagagtttatatagaggaggcaatcctcacattatgaaccggctcttaaggatgagttag 8056243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15968275 - 15968189
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||| ||||||| ||||| ||||||| |||||||||||||||| ||| |||||||||||||||  |||||| ||| |||||||||||    
T  15968275 catcagatagattagacttttgataagagtttatatagaggaggcaaccctcaccttatgaaccggtttttaaggttgagttaggcc 15968189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5720956 - 5720898
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||    
T  5720956 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttat 5720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15968517 - 15968431
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    ||||| |||||| ||||||||||||| ||||||| |||||||||||| ||||||||||| |||   ||||| ||| |||||||||||    
T  15968517 catcgtatagattagactcttgataagagtttatttagaggagacaaccctcaccttataaaccgatttttaaggttgagttaggcc 15968431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33435694 - 33435751
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||    
T  33435694 catcggatagataaaactcttgataagagtttatataaaggagacaatcctcatctta 33435751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43599326 - 43599383
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  43599326 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 43599383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8056576 - 8056524
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctca 53  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  8056576 catcagatagataagactcttgataagtgtttatatagaggagacaatcctca 8056524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3184000 - 3183943
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| ||||||||||||||    
T  3184000 catcggatagataggactcttgagaagagtttataaagaggaggcaatcctcacctta 3183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8559596 - 8559653
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  8559596 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 8559653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10989330 - 10989273
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  10989330 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 10989273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15011118 - 15011061
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  15011118 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 15011061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40902482 - 40902425
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  40902482 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 40902425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42228786 - 42228843
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  42228786 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 42228843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35561681 - 35561737
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||||||| |||||| || |||||||| ||||||| |||||||||||||    
T  35561681 catcggatagataagattcttgagaagagtttataaagaggaggcaatcctcacctt 35561737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20760749 - 20760662
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || |||||||| ||| ||| ||||||||||||||  |||  ||||| | |||||||||||||||    
T  20760749 catcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggcc 20760662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 22188959 - 22189026
Alignment:
Q  22 gataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcctt 89  Q
    ||||||||||||||| |||||| |||||||||||| || ||||  ||||| ||||| |||||||||||    
T  22188959 gataaaagtttatattgaggaggcaatcctcacctgataaactgatttttaaggataagttaggcctt 22189026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4196039 - 4195982
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||  ||||||| ||||||||||||||    
T  4196039 catcggatagacaagactcttgagaagagtttatcaagaggaggcaatcctcacctta 4195982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15010910 - 15010853
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || | |||||| ||||||| ||||||||||||||    
T  15010910 catcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcacctta 15010853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16454724 - 16454667
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||| | || ||| |||| ||||||| ||||||||||||||    
T  16454724 catcggatagataagactcttaagaagagtatataaagaggaggcaatcctcacctta 16454667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34248092 - 34248149
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||| |||||||||||| |||||||| ||||||| || |||||||||||    
T  34248092 catcggttagataggactcttgataagagtttataaagaggaggcactcctcacctta 34248149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39705803 - 39705738
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaa---tcctcaccttatgaac 63  Q
    ||||||||| |||||||||||||||| |||||| ||| ||||| |||   ||||||||||||||||    
T  39705803 catcggataaataagactcttgataagagtttaaatacaggaggcaatattcctcaccttatgaac 39705738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 10989116 - 10989066
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  10989116 tagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 10989066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 15967888 - 15967835
Alignment:
Q  30 tttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggc 86  Q
    ||||||||||||||||||||||||||   |||||  |||||| ||||||||||||||    
T  15967888 tttatatagaggagacaatcctcacc---tgaaccggtttttaaggatgagttaggc 15967835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34248381 - 34248431
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||||||||| |||||||| ||||||| || |||||||||||    
T  34248381 tagataggactcttgataagagtttataaagaggaggcactcctcacctta 34248431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 41456575 - 41456510
Alignment:
Q  22 gataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||| ||||||||||||||||||| ||||||||| |||| |  |||||| ||||||||||| ||||    
T  41456575 gataagagtttatatagaggagacagtcctcacctgatgatc-ggtttttaaggatgagttatgcct 41456510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18905871 - 18905928
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  18905871 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 18905928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21085237 - 21085180
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  21085237 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 21085180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21653819 - 21653876
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||   ||||||| ||||||||||| ||||||| || |||||||||||    
T  21653819 catcggatagatagtgctcttgagaaaagtttatacagaggaggcactcctcacctta 21653876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26122833 - 26122780
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    |||||||||||| ||||||||||| | |||||||| ||||||  ||||||||||    
T  26122833 catcggatagatgagactcttgatgagagtttataaagaggatgcaatcctcac 26122780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45122326 - 45122382
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||||||||||||| || ||| |||| ||| ||||||||||||||||||    
T  45122326 catctgatagataagactcttgagaagagtatataaaga-gagacaatcctcacctta 45122382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 30066036 - 30066084
Alignment:
Q  40 ggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||| ||||||||||||||||| ||||| | |||||||||||||||    
T  30066036 ggagacactcctcaccttatgaactggttttgtaaggatgagttaggcc 30066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33833965 - 33834052
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  33833965 catcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcct 33834052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 29646083 - 29646165
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||    
T  29646083 ggatagataagactcttgataggagtttatatagaggaggcaatcctcaccttatgaaccggtttttaaggatgagttaggcc 29646165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31357764 - 31357675
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttg--aggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   | |||||  ||||||||||||||||    
T  31357764 catcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaagccgattttgtaaggatgagttaggcct 31357675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30768433 - 30768518
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggc 86  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| | |||||| ||||||||||||||    
T  30768433 catcggatagataagactcttgataataatttatatagaggagacgatcctcacctaatgaattggtttttaaggatgagttaggc 30768518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10903573 - 10903490
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||| |||||| || |||||||||    
T  10903573 catcggatagataagactcttgataagagtttatatagaggaggcaatcctcaacttatgtactagtttttaagaatgagttag 10903490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33834170 - 33834241
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttg 72  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  33834170 catcagatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttg 33834241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29645830 - 29645909
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgag 80  Q
    |||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||  |||||| ||||||||    
T  29645830 catcggatagataagactcttgatatgagtttatataaaggaggcaatcctcaccttatgaaccggtttttaaggatgag 29645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 7833047 - 7832965
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcc 87  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||  | ||||| |||||||||||||||    
T  7833047 gatagataagactcttgataggagtttatatagaggaggcaatcctcaccttatgaaccggttttttaaggatgagttaggcc 7832965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22841067 - 22841125
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  22841067 catcggatagataagactcttggtaagagtttatatagaggagacaatcctcaccttat 22841125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33855706 - 33855793
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||  ||||| | || ||||||||||||    
T  33855706 catcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggcc 33855793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38948502 - 38948419
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| |||| |  ||||| ||||||||||||    
T  38948502 catcggaaagataagactctttataagagtttatatagaggagacaattctcaccttgtgaattgatttttaaggatgagttag 38948419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16564909 - 16564999
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcctta 90  Q
    ||||||||||||||||||||| |||| |||||||| | ||||| || ||||||||||||||||  | ||||| ||||||||||||||||||    
T  16564909 catcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaaggatgagttaggcctta 16564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16600753 - 16600663
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcctta 90  Q
    ||||||||||||||||||||| |||| |||||||| | ||||| || ||||||||||||||||  | ||||| ||||||||||||||||||    
T  16600753 catcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaaggatgagttaggcctta 16600663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4258089 - 4258001
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||  | ||||| ||||||||||||||||    
T  4258089 catcggatagataagactcttgataagagtttatcaataggaggcactcctcaccttatgaaccagttttttaaggatgagttaggcct 4258001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10903366 - 10903314
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctca 53  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  10903366 catcggatagataagactcttgataagagtttatatagaggaggcaatcctca 10903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16565113 - 16565201
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttga-ggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||||||||   ||||| | |||||||||||||||    
T  16565113 catcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaaccgattttttacggatgagttaggcct 16565201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16600549 - 16600461
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttga-ggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||||||||   ||||| | |||||||||||||||    
T  16600549 catcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaaccgattttttacggatgagttaggcct 16600461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2232111 - 2232166
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  2232111 catcggatagataaaactcttgataagagtttatatagaggaggcaatcctcacct 2232166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2179669 - 2179727
Alignment:
Q  1 catcggatagataagactcttgataaa-agtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  2179669 catcggatagataagactcttgagaaagagtttataaagaggagacaatcctcacctta 2179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24377933 - 24377847
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||||||||||||| ||| ||||||  |||||||||||| ||||||||||||| |||| |||   |||||| |||||||||||||||    
T  24377933 catcggatagataaaacttttgataggagtttatatagatgagacaatcctcatcttacgaatcagtttttaaggatgagttaggcc 24377847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6782841 - 6782898
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  6782841 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 6782898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6783053 - 6783110
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  6783053 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 6783110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9379015 - 9379072
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  9379015 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 9379072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49040581 - 49040638
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||    
T  49040581 catcggatagataagactcttgataagagtttatatagaggagaatatcctcatctta 49040638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5266374 - 5266458
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    |||| ||||||||||||||||||||| || ||||||||||||  ||||||||| |||||||||  ||||| | ||||||||||||    
T  5266374 catcagatagataagactcttgataagagattatatagaggatccaatcctcaacttatgaaccggttttgtaaggatgagttag 5266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47856080 - 47856020
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatga 61  Q
    |||||||||||||||||||||||||| |||||||| ||||||| || ||| ||||||||||    
T  47856080 catcggatagataagactcttgataagagtttataaagaggaggcactccccaccttatga 47856020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 29252593 - 29252648
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  29252593 tcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 29252648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39808553 - 39808466
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||  | |  ||||| |||||||||||||||||    
T  39808553 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttaaaagccggttttgtgaggatgagttaggcc 39808466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39808686 - 39808599
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||  | |  ||||| |||||||||||||||||    
T  39808686 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccagttttgtgaggatgagttaggcc 39808599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23390605 - 23390646
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagagga 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  23390605 catcggatagataagactcttgataagagtttatatagagga 23390646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31374780 - 31374837
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||| |||| || |||||||| ||||||| ||||||||||||||    
T  31374780 catcggatagataagactattgagaagagtttataaagaggaggcaatcctcacctta 31374837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35866728 - 35866671
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| |||| ||||    
T  35866728 catcggatagataagactcttgataagagtttatatagagggggcaatactcaactta 35866671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4258293 - 4258205
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| ||||||   | ||||| || ||||||||||||||||  | ||||| ||||||| ||||||||    
T  4258293 catcggatagataagactcttgataagagtttaccaataggaggcactcctcaccttatgaaccggctttttaaggatgaattaggcct 4258205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13310309 - 13310251
Alignment:
Q  1 catcggatagataagactcttgataaaagt---ttatatagaggagacaatcctcacct 56  Q
    |||||||||||||||||||||||||| |||   ||||||||||||| ||||||||||||    
T  13310309 catcggatagataagactcttgataagagtttattatatagaggaggcaatcctcacct 13310251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 36492626 - 36492575
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||| ||||||||||||||||||||| ||||||| || |||||||||||    
T  36492626 atagataggactcttgataaaagtttataaagaggaggcactcctcacctta 36492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40703948 - 40703893
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    |||||||||||| ||||||||||| | |||||||| |||||||||| |||||||||    
T  40703948 catcggatagatgagactcttgatgagagtttataaagaggagacactcctcacct 40703893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 43167981 - 43167922
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatga 61  Q
    ||||||||||||  |||||||| || |||||||| ||||||| |||||||||||||||||    
T  43167981 atcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatga 43167922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 33855497 - 33855547
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctc 52  Q
    |||||||||||||||||| |||||| |||||||| |||||||||| |||||    
T  33855497 atcggatagataagactcgtgataatagtttataaagaggagacactcctc 33855547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1661280 - 1661223
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| |||||||| || |||||||| ||||||| || |||||||||||    
T  1661280 catcggatagataaaactcttgagaagagtttataaagaggaggcactcctcacctta 1661223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7135332 - 7135275
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  7135332 catcggatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 7135275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14691087 - 14691144
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||| ||| |||||||| |||||||| |||||||||| |||||||||||    
T  14691087 catcggttagataggacgcttgataagagtttataaagaggagacactcctcacctta 14691144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37272134 - 37272077
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||| |||||||||||| |||||||| ||||||| || |||||||||||    
T  37272134 catcggttagataggactcttgataagagtttataaagaggaggcactcctcacctta 37272077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48114012 - 48114053
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagagga 42  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  48114012 catcggatagataagactcttgataagagtttataaagagga 48114053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 34590554 - 34590626
Alignment:
Q  12 taagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagtta 83  Q
    |||||||||| |||| |||||||| ||||||| || ||||||||||||||||  ||||| | |||||||||||    
T  34590554 taagactcttcataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagtta 34590626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 29780168 - 29780219
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||| ||||||||| || |||||||| |||||||||| |||||||||||    
T  29780168 atagatatgactcttgagaagagtttataaagaggagacactcctcacctta 29780219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9378808 - 9378858
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcct 51  Q
    ||||| ||||||||||||||||| || |||||||| ||||||| |||||||    
T  9378808 catcgaatagataagactcttgagaagagtttataaagaggaggcaatcct 9378858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 23396627 - 23396681
Alignment:
Q  4 cggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||| || ||| |||| ||| ||| ||||||||||||||    
T  23396627 cggatagataagactcttgagaagagtatataaagatgaggcaatcctcacctta 23396681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31149072 - 31149130
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||| ||||||||||||||| ||||| |||||| | ||||||| || ||||||||||||    
T  31149072 catcagatagataagactctcgataagagtttacaaagaggaggcactcctcaccttat 31149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31167364 - 31167422
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||| ||||||||||||||| ||||| |||||| | ||||||| || ||||||||||||    
T  31167364 catcagatagataagactctcgataagagtttacaaagaggaggcactcctcaccttat 31167422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40122028 - 40121974
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    |||||||||||||  |||||||| || |||||||| |||||||||| ||||||||    
T  40122028 catcggatagatagtactcttgagaagagtttataaagaggagacactcctcacc 40121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36092688 - 36092631
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || |||||| || |||||||| ||||||| || |||||||||||    
T  36092688 catcggatagataggattcttgagaagagtttatagagaggaggcactcctcacctta 36092631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43288279 - 43288336
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||| |||||||||||| |||||||| ||||||| || |||||| ||||    
T  43288279 catcggttagataggactcttgataagagtttataaagaggaggcactcctcatctta 43288336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43288547 - 43288604
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| | |||||||||||||| || |||||||| ||||||| || |||||||||||    
T  43288547 catcggtttgataagactcttgacaagagtttataaagaggaggcactcctcacctta 43288604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43384369 - 43384312
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || |||||| || |||||||| ||||||| || |||||||||||    
T  43384369 catcggatagataggattcttgagaagagtttataaagaggaggcactcctcacctta 43384312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8681899 - 8681947
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatc 49  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||| |||||    
T  8681899 catcagatagataagactcttgataagagtttataaagaagaggcaatc 8681947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 24426770 - 24426825
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||| ||||||||||| |||||||| |||| ||| | ||||||||||||    
T  24426770 tcggatagataa-actcttgataagagtttataaagagaagatattcctcaccttat 24426825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 42068639 - 42068671
Alignment:
Q  5 ggatagataagactcttgataaaagtttatata 37  Q
    |||||||||||||| ||||||||||||||||||    
T  42068639 ggatagataagacttttgataaaagtttatata 42068671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 42556108 - 42556164
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||| |||||  ||||||||||||| ||| |||||| || |||||||||||||    
T  42556108 atagataaaactctaaataaaagtttataaagaagagacactcttcaccttatgaac 42556164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 14115579 - 14115493
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  14115579 atcggatagataagactcttgataagagtttatatagaggagacaatccttaccttatgaacctgtttttaaggatgagttaggcct 14115493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 3640223 - 3640308
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||    
T  3640223 tcggatagataagactcttgataagagtttatatagaggagacaatcctcactttatgaaccggtttttaaggatgagttaggcct 3640308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 41743556 - 41743638
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||    
T  41743556 gatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaaccggtttttaaggatgagttaggcct 41743638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 18335579 - 18335640
Alignment:
Q  117 accccctatagttccaactaaaaagacaaaatgattttgaattacctcaattgaagtaatga 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18335579 accccctatagttccaactaaaaagacgaaatgattttgaattacctcaattgaagtaatga 18335640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8305044 - 8304957
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||   ||||| || |||||| ||||||    
T  8305044 catcggatagataagacttttgataagagtttatatagaggagacaatcctcaccttatgaaccgatttttaagaatgagtcaggcct 8304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45684263 - 45684176
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||   |||||| ||| ||||||||||||    
T  45684263 catcggatagatacgactcttgataaaagtttatatagagaagacaatcctcacctgatgaatcggtttttaaggttgagttaggcct 45684176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45684478 - 45684391
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||| ||| || |||||| |||||| |||||||||||||||||||  |||||| ||||||||||||||||    
T  45684478 catcggatagataagactcttggtaagagcttatatggaggaggcaatcctcaccttatgaaccagtttttaaggatgagttaggcct 45684391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47491935 - 47491848
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||||||||| |||| ||||| |||||| ||||||||||||||||    
T  47491935 catcggatagataagactcttgataggagtttatataaaggaggcaatcctcaacttaagaactggtttttaaggatgagttaggcct 47491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 14115830 - 14115747
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||| |||||||| |||||||||||||||  |||||||||||||||||||  |||||| |||||||||| |||||    
T  14115830 ggatagataagacacttgataagagtttatatagaggatgcaatcctcaccttatgaaccggtttttaaggatgagttgggcct 14115747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3640471 - 3640560
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac--ttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||   | ||||| ||||||||||||||||    
T  3640471 catcggatagataagactcttgataagagtttaaatagaggaggcaatcctcaccttctgaaccggtttttttaaggatgagttaggcct 3640560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7892741 - 7892684
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7892741 catcggatagataagactcttgatatgagtttatatagaggagacaatcctcacctta 7892684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42561955 - 42561867
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta-tgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| |||||   ||||| ||||||||||||||||    
T  42561955 catcggatatataagactcttgataaaattttatatagaggaggcaatcatcaccttattgaaccaatttttaaggatgagttaggcct 42561867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53863920 - 53864004
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||  ||||| | ||||||||||||    
T  53863920 catcggatagataagacttttgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttag 53864004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9758319 - 9758400
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagtt 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||| ||||  |||||| ||||| ||||    
T  9758319 catcggatagataagactcttgataagagtttatatagaggagacaactctcatcttaagaaccggtttttaaggataagtt 9758400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 10390560 - 10390480
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    ||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||  ||||| | ||||||||||||    
T  10390560 ggatagataagtctcttgataatagtttataaagaggagacattcctcaccttatgaaccagttttgtaaggatgagttag 10390480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 56511319 - 56511399
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||  ||||| | |||||||||||||||    
T  56511319 tagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggcc 56511399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10390765 - 10390678
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||| ||||| |||||||||| |||||||| |||||||||| |||||||||||| |||  ||||| | |||||||||||||||    
T  10390765 catcggatatataagtctcttgataatagtttataaagaggagacactcctcaccttatcaaccagttttataaggatgagttaggcc 10390678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8560060 - 8560007
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  8560060 catcggatagataagactcttgataagagtttatatcgaggaggcaatcctcac 8560007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23350814 - 23350871
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  23350814 catcggataaataagactcttgataagagtatataaagaggagacaatcctcacctta 23350871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25753694 - 25753637
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  25753694 catcggatagacaagactcttgataagagtttataaagaggaggcaatcctcacctta 25753637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43943688 - 43943745
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  43943688 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 43943745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49380969 - 49380912
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  49380969 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 49380912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14945158 - 14945242
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    |||||||||||||||||||||   || |||||||||||||||  |||||||||||||||||||  ||||| | ||||||||||||    
T  14945158 catcggatagataagactcttcgaaagagtttatatagaggatgcaatcctcaccttatgaaccggttttgtaaggatgagttag 14945242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22865784 - 22865868
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    ||||||||||||||||| |||||||| |||||||| ||||| | || ||||||||||||||||  ||||| | ||||||||||||    
T  22865784 catcggatagataagacccttgataatagtttataaagagggggcagtcctcaccttatgaaccggttttgtaaggatgagttag 22865868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 56511526 - 56511606
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||   |||| | |||||||||||||||    
T  56511526 tagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccgattttgtaaggatgagttaggcc 56511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 4905592 - 4905537
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||    
T  4905592 tcggatagataagactcttgagaagagtgtataaagaggagacaatcctcacctta 4905537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29113464 - 29113551
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||| |||||||||||||||||| || |||||||| ||||||| ||||||||||||||  | || ||||| | |||||||||||||||    
T  29113464 catcagatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 29113551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14944909 - 14944971
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||| ||||||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  14944909 catcagatagataagactcttggtaagagtttacatagaggaggcgatcctcaccttatgaac 14944971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50307291 - 50307353
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||||||||||||||||||| || |||||||| || |||| || ||||||||||||||||    
T  50307291 catcggatagataagactcttgacaagagtttataaagcggaggcactcctcaccttatgaac 50307353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4645867 - 4645924
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| |||||| |||||||||||||||    
T  4645867 catcggatagataagactcttgagaagagtatataaagaggatacaatcctcacctta 4645924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5488382 - 5488439
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| ||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  5488382 catcggataaataagactcttgagaagagtttataaagaggaggcaatcctcacctta 5488439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12016772 - 12016715
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  12016772 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 12016715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12016980 - 12016923
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  12016980 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 12016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15665168 - 15665225
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||||||||||| || |||||||||||    
T  15665168 catcggatagataggactcttgagaagagtttatatagaggaggcactcctcacctta 15665225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39110922 - 39110979
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| |||||||||||||||| |||||    
T  39110922 catcggatagataagactcttgagaagagtatataaagaggagacaatcctcgcctta 39110979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 49380679 - 49380732
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  49380679 ggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 49380732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53720759 - 53720702
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||| |||||||||||||||  ||||||| ||||||| ||||||    
T  53720759 catcggatagataagacttttgataaaagtttattaagaggaggcaatccttacctta 53720702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5065868 - 5065926
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||||||||||||||||||||| |||| | |||| ||||||  |||||||||||||||    
T  5065868 catcggatagataagactcttgaaaaaaatatataaagaggatgcaatcctcaccttat 5065926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28497303 - 28497261
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggag 43  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  28497303 catcggatagataagactcttgataagagtttataaagaggag 28497261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52810714 - 52810660
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    |||||||||||||||| |||||| || |||||||| |||||||||| ||||||||    
T  52810714 catcggatagataagattcttgagaagagtttataaagaggagacactcctcacc 52810660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 990562 - 990619
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| |||||||| || |||||||| ||||||| || |||||||||||    
T  990562 catcggatagataacactcttgagaagagtttataaagaggaggcactcctcacctta 990619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23018485 - 23018542
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  23018485 catcggatagatatgactcttgagaagagtttataaagaggaggcattcctcacctta 23018542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27634415 - 27634358
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| |||| |||||||||    
T  27634415 catcggatagataagactcttgagaagagtatataaagaggaggcaattctcacctta 27634358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43972370 - 43972427
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| ||||||| ||| ||||||| || |||||||||||    
T  43972370 catcggatagataggactcttgagaaaagttgataaagaggaggcactcctcacctta 43972427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49544347 - 49544400
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    |||||||||||||||| |||||| || |||||||| |||||||||| |||||||    
T  49544347 catcggatagataagattcttgagaagagtttataaagaggagacactcctcac 49544400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51469496 - 51469553
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  51469496 catcggatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 51469553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 52827317 - 52827264
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||||    
T  52827317 ggatagataggactcttgataagagtttataaagaggaggcactcctcacctta 52827264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28246008 - 28246064
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||| ||||||||||| | |||||||| |||| || |||||||||||||    
T  28246008 catcggatagatgagactcttgatgagagtttataaagagaaggcaatcctcacctt 28246064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 22867101 - 22867156
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  22867101 tcggatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 22867156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 53738291 - 53738240
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||| || |||||||| |||||||||| || ||||||||    
T  53738291 atagataagactcttgagaagagtttataaagaggagacactcgtcacctta 53738240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 10390379 - 10390300
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    |||||||||||||| |||||||||| |    ||| |||| ||||| ||||||||||||||||| ||||| | ||||||||||||    
T  10390379 atcggatagataagtctcttgataata----ataaagagaagacactcctcaccttatgaactagttttgtaaggatgagttag 10390300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34206083 - 34206025
Alignment:
Q  1 catcggatagataagactcttgataaaagt-ttatatagaggagacaatcctcacctta 58  Q
    |||||| ||||||||||||||||||| ||| ||||| ||||||| || |||||||||||    
T  34206083 catcggttagataagactcttgataagagtcttataaagaggaggcactcctcacctta 34206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34206345 - 34206287
Alignment:
Q  1 catcggatagataagactcttgataaaagt-ttatatagaggagacaatcctcacctta 58  Q
    |||||| ||||||||||||||||||| ||| ||||| ||||||| || |||||||||||    
T  34206345 catcggttagataagactcttgataagagtcttataaagaggaggcactcctcacctta 34206287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 52214637 - 52214687
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||| ||||||||||| |||||||| ||||||| || |||||||||||    
T  52214637 tagataatactcttgataagagtttataaagaggaggcactcctcacctta 52214687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 991219 - 991276
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| |||||||| || ||||||||  |||||| || |||||||||||    
T  991219 catcggatagataacactcttgagaagagtttataatgaggaggcactcctcacctta 991276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5212090 - 5212033
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||| |||||||||| |||| |||||||| |||  |||||||||||||||||    
T  5212090 catcagataggtaagactcttaataagagtttataaagaatagacaatcctcacctta 5212033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 7198071 - 7198034
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagagga 42  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  7198071 ggatagataagactcttgataagagtttataaagagga 7198034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7806483 - 7806427
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| |||||||||| | || ||||| |||||||||| |||||||||||    
T  7806483 catcggatagata-gactcttgatgatagcttataaagaggagacactcctcacctta 7806427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21647670 - 21647601
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt 70  Q
    ||||||||||||| |||||||||||| || ||||| ||||||| || |  ||||||||||| || |||||    
T  21647670 catcggatagatatgactcttgataagaggttataaagaggagccacttatcaccttatgagctggtttt 21647601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 28395197 - 28395249
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  28395197 ggatagataagactcttga-aagagtatataaagaggaggcaatcctcacctta 28395249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29669452 - 29669395
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  29669452 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 29669395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39110732 - 39110789
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||| |||||| || ||| | || ||||||| ||||||||||||||    
T  39110732 catcggatagataagaatcttgagaagagtatgtaaagaggaggcaatcctcacctta 39110789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40716725 - 40716668
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||| ||||||||||||||||| || ||| |||| ||||||| ||||||| ||||||    
T  40716725 catcgtatagataagactcttgagaatagtatataaagaggaggcaatccttacctta 40716668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 42312846 - 42312887
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggag 43  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  42312846 atcggatagatgagactcttgatgaaagtttataaagaggag 42312887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 43972058 - 43972111
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| ||||||||| || |||| ||| |||||||||| |||||||||||    
T  43972058 ggatagataggactcttgagaagagttgataaagaggagacactcctcacctta 43972111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45427025 - 45426968
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  45427025 catcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctta 45426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48843106 - 48843049
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  48843106 catcagatagataggactcttgaaaagagtttataaagaggaggcactcctcacctta 48843049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53740197 - 53740254
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  53740197 catcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctta 53740254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12879356 - 12879300
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||| |||| ||||||| ||||| | ||||||||| | |||||||||||    
T  12879356 atcggatagatatgacttttgataagagtttttttagaggagatactcctcacctta 12879300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17077233 - 17077177
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||| ||||||||||| | |||| ||| ||||||| ||| |||||||||    
T  17077233 catcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcacctt 17077177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 33797194 - 33797142
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    ||||||||| |||||||||||| |||||||| ||| ||| || ||||||||||    
T  33797194 ggatagataggactcttgataagagtttataaagacgaggcactcctcacctt 33797142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 40197229 - 40197269
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaa 47  Q
    |||||| ||||||||||||| |||||||| |||||||||||    
T  40197229 atagatgagactcttgataagagtttataaagaggagacaa 40197269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26926922 - 26927009
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  26926922 catcagatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttttaaggatgagttaggcct 26927009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39269515 - 39269602
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||    
T  39269515 catcggatagataagactcttgataagagtttatatagaggagacaatcctcaacttatgaactggtttttaaagatgagttaggcct 39269602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40927045 - 40927126
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagtt 82  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  40927045 catcggatagataagactcttgataagagtttatatagaggagacaatcctcatcttatgaactagtttttaaggatgagtt 40927126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39018879 - 39018792
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||    
T  39018879 catcggatagataagactcttgataggagtttatatagaggagacaatcctcaacttatgaaccagtttttaaggatgagttaggcct 39018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40926469 - 40926556
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||  |||||| ||||||||||||||||    
T  40926469 catcggatagataagactcttgataagagtttatatagaggagacaatcctctccttaagaaccggtttttaaggatgagttaggcct 40926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 40926801 - 40926884
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcctt 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||| ||||    
T  40926801 gatagataagactcttgataagagtttatatagaggagacaatcctctccttatgaaccggtttttaaggatgagttagtcctt 40926884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32034106 - 32034189
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    ||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||  |||||| ||||||||||||    
T  32034106 catcgaatagataagactcttgataagagtttatacaaaggagacaatcctcaccttatgaaccggtttttaaggatgagttag 32034189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 37040064 - 37039985
Alignment:
Q  9 agataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||    
T  37040064 agataagactcttgataagagttaatatagaggagacaattctcaccttatgaattagtttttaaggatgagttaggcct 37039985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40926718 - 40926780
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  40926718 catcggatagataagactcttgataagagtttatatagaggagacaatcctctccttatgaac 40926780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 44367599 - 44367681
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||  ||||  ||||||||||||||||    
T  44367599 gatagataagactcttgagaagagtttatatagaggagacaatcctcaacttatgaactgattttcaaggatgagttaggcct 44367681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 39269070 - 39269143
Alignment:
Q  11 ataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||    
T  39269070 ataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaaccagtttttaaggatgagttag 39269143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 44367795 - 44367879
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||  |||||| || || |||||||||    
T  44367795 tcggatagataaaactcttgataagagtttatatagaggaggcaatcctcaccttatgaaccagtttttaagaattagttaggcc 44367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19984736 - 19984657
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||| ||| ||| ||||||||||||  ||||||||||||||||||||||  |||||| ||||||||||||    
T  19984736 ggatagataagacttttggtaagagtttatatagactagacaatcctcaccttatgaaccggtttttaaggatgagttag 19984657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 42637832 - 42637749
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagagg----agacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||||| |||||||||| |||    ||||||||||||||||||||||  |||||| ||||||||||||    
T  42637832 ggatagataagactcttgataagagtttatataaaggagacagacaatcctcaccttatgaaccggtttttaaggatgagttag 42637749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54495546 - 54495603
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  54495546 catcggatagataagactcttgagaagagtttataaagaggagacaatcctcacctta 54495603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 35011679 - 35011759
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||  ||||| | |||||||||||||||    
T  35011679 tagataagactcttgataagagattataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttaggcc 35011759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 35011886 - 35011966
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||  ||||| | |||||||||||||||    
T  35011886 tagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggcc 35011966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 50338466 - 50338414
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  50338466 gatagataagactcttgataagagtttatatagaggagacaatcttcacctta 50338414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 39268966 - 39268883
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||  |||||||||||||| |||  |||||| ||||||||||||    
T  39268966 catcggatagataagactattgataggagtttatatagagaaggtaatcctcaccttataaaccggtttttaaggatgagttag 39268883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50203946 - 50203859
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| || |||||||| ||||||| || |||||||||||| |||  ||||| | |||||||||||||||    
T  50203946 catcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgagttaggcc 50203859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29763785 - 29763723
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||| || |||||||||    
T  29763785 catcggatagataagactcttgataagagtttataaagaggagacactccccatcttatgaac 29763723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35015500 - 35015558
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||    
T  35015500 catcggatagataaaactcttgataaaagtttataaagaggaggcaatcctcactttat 35015558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44145210 - 44145152
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  44145210 catcagatagataagactcttgataatagtttataaagaggagacaatactcaccttat 44145152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 46509691 - 46509637
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  46509691 tcggatagagaagactcttgataaaagtttatatagaagaggcaatcctcacctt 46509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 16078949 - 16078896
Alignment:
Q  4 cggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  16078949 cggatagataagactcttgataaaagtttatataaaggaggcaatcatcacctt 16078896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 20737242 - 20737307
Alignment:
Q  22 gataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcc 87  Q
    ||||||||||||||||||||| |||||||  |||||||||||  |||||| |||||||||||||||    
T  20737242 gataaaagtttatatagaggaaacaatcccaaccttatgaaccggtttttaaggatgagttaggcc 20737307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25578769 - 25578713
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  25578769 catcggatagataagact-ttgataagagtttatatagaggagacaatcttcacctta 25578713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 26915136 - 26915181
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcct 51  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  26915136 gatagataagactcttgataagagtttatatagaggagacaatcct 26915181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49477549 - 49477606
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  49477549 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 49477606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50692541 - 50692598
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  50692541 catcggatagacaagactcttgataagagtttataaagaggaggcaatcctcacctta 50692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32515996 - 32515920
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggat 77  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||| ||||  |||||||  |||||| |||||    
T  32515996 catcggatagataagactcttgataggagtttatatagaggagataatcatcactatatgaaccggtttttaaggat 32515920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4029733 - 4029646
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| || |||||||| |||||| |||||| ||||||||  |||  ||||| | |||||||||||||||    
T  4029733 catcggatagataagactcttgagaagagtttataaagaggatacaatcttcaccttacaaaccggttttgtaaggatgagttaggcc 4029646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19984257 - 19984175
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||||| ||| || ||||||||  ||| ||||||||||| |||||||  |||||| ||||||||||||    
T  19984257 catcggatagataagactcttggtaagagcttatataggtgaggcaatcctcaccatatgaac-cgtttttaaggatgagttag 19984175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21832780 - 21832693
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || ||||||||  ||||||||||||||||||||||   || ||||| | |||||||||||||||    
T  21832780 catcggatagacaagactcttgagaagagtttataaggaggagacaatcctcaccttatatgctggttttgtaaggatgagttaggcc 21832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 49477349 - 49477399
Alignment:
Q  8 tagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  49477349 tagataagactcttgagaaaagtttataaagaggaggcaatcctcacctta 49477399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4191211 - 4191154
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||||||||||| ||||||    
T  4191211 catcggatagacaagactcttgagaagagtttataaagaggagacaatcctgacctta 4191154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9264175 - 9264118
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  9264175 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 9264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11414379 - 11414435
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||    
T  11414379 catcggata-ataagactcttgagaagagtttataaagaggagacaatcctcacctta 11414435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22339756 - 22339813
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  22339756 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 22339813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35358542 - 35358485
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  35358542 catcagatagataagactcttgaaaaaagtatataaaaaggagacaatcctcacctta 35358485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40230728 - 40230671
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||||||    
T  40230728 catcggatagatgagactcttgatgagagtttataaagaggaggcaatcctcacctta 40230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 44461304 - 44461365
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||||||||| ||| ||||||| | |||||| |||||||||| ||||||||||||||||    
T  44461304 atcggatagataaaactattgataagaatttataaagaggagacactcctcaccttatgaac 44461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50692338 - 50692395
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  50692338 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 50692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51642724 - 51642667
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  51642724 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 51642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19820616 - 19820529
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcct 88  Q
    ||||||||| |||| |||||||| || |||||||| ||||||||||||||||||||||  |||  ||||| | ||||||||||||||||    
T  19820616 catcggata-ataaaactcttgagaagagtttataaagaggagacaatcctcaccttacaaaccggttttgtaaggatgagttaggcct 19820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39078859 - 39078803
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  39078859 atcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 39078803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 53640053 - 53639997
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  53640053 atcggatagataagactcttgacaagagtatataaagaggaggcaatcctcacctta 53639997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 19984481 - 19984414
Alignment:
Q  22 gataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcctt 89  Q
    ||||| |||||||||||||||| |||||| ||||||| || |  |||||| |||||||||||||||||    
T  19984481 gataagagtttatatagaggaggcaatccgcaccttacgatccggtttttaaggatgagttaggcctt 19984414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21832288 - 21832233
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||    
T  21832288 catcggatagacaagactcttgagaaaagtttataaagatgaggcaatcctcacct 21832233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34992884 - 34992939
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    |||| |||||||||||||||||| || |||||||| ||||||| ||||||||||||    
T  34992884 catcagatagataagactcttgagaagagtttataaagaggaggcaatcctcacct 34992939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9180383 - 9180437
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    ||||||||||||| || |||||| ||||||||||| |||||||||| ||||||||    
T  9180383 catcggatagataggattcttgagaaaagtttataaagaggagacactcctcacc 9180437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 53761485 - 53761427
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatga 61  Q
    ||||||||||||||| |||||||| |||||||| ||||||| || ||||||||| ||||    
T  53761485 tcggatagataagacccttgataagagtttataaagaggaggcactcctcacctaatga 53761427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9264382 - 9264325
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  9264382 catcggatagacaagactcttgagaagagtatataaagaggaggcaatcctcacctta 9264325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9264589 - 9264536
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||    
T  9264589 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcac 9264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 31801751 - 31801808
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaact 64  Q
    |||||||||||||||||||| |||||||| ||| | |||| |||||| ||||||||||    
T  31801751 atagataagactcttgataatagtttataaagaagggacattcctcatcttatgaact 31801808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32215619 - 32215562
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||| |||||| ||||||||||| | |||||||| ||||||||| ||||||||||||    
T  32215619 catcgtatagatgagactcttgatgagagtttataaagaggagaccatcctcacctta 32215562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37223590 - 37223647
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||| ||| || |||||||| ||||||| ||||| ||||||||    
T  37223590 catcggatagataagactcctgagaagagtttataaagaggaggcaatcatcacctta 37223647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39956763 - 39956706
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  39956763 catcagatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 39956706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40230523 - 40230467
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||||||    
T  40230523 catcggatagatgagactcttgatgagagtttataaagaggag-caatcctcacctta 40230467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42258925 - 42258982
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||| |||||| || ||| |||| ||||||| ||||||||||||||    
T  42258925 catcggatagataagattcttgagaagagtatataaagaggaggcaatcctcacctta 42258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44461156 - 44461095
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaa 62  Q
    |||||| || |||| ||||||||||| |||||||| |||||||||| |||||||||| ||||    
T  44461156 catcgggtaaataacactcttgataagagtttataaagaggagacattcctcaccttgtgaa 44461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51338530 - 51338473
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  51338530 catcagatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 51338473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 51642513 - 51642460
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  51642513 ggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 51642460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53640261 - 53640204
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  53640261 catcagatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 53640204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53780112 - 53780169
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||| ||||| |||||| || |||| |||||||||||||||||||||| ||||||||    
T  53780112 catcgaatagacaagacttttaataagagtttatatagaggagacaatcatcacctta 53780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34992592 - 34992644
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctca 53  Q
    |||| |||||||||||||||||| || |||||||| ||||||| |||||||||    
T  34992592 catcagatagataagactcttgagaagagtttataaagaggaggcaatcctca 34992644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 35358750 - 35358670
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    ||||||||||||||||||| |||||| ||||  |||||| ||||| ||||||||  | || ||||| ||||||||||||||    
T  35358750 ggatagataagactcttgagaaaagtatataaggaggaggcaatcatcaccttacaagctggttttgtgaggatgagttag 35358670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 5440631 - 5440682
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||| ||||||||||| || |||||||| ||||||| ||||||||||||    
T  5440631 ggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacct 5440682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 19841507 - 19841550
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagaca 46  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||    
T  19841507 tcggataaataagactcttgataaaagtttataaagatgagaca 19841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 33799153 - 33799196
Alignment:
Q  20 ttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||    
T  33799153 ttgataagagtttatatagaggagacaatcctaacctgatgaac 33799196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 26927151 - 26927193
Alignment:
Q  46 aatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||  |||||| ||||||||||||||||    
T  26927151 aatcctcaccttatgaaccggtttttaaggatgagttaggcct 26927193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24860150 - 24860093
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||| ||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  24860150 catcggataaataggactcttgagaagagtttataaagaggaggcactcctcacctta 24860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26366746 - 26366803
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| | | ||| ||||||||||||||    
T  26366746 catcggatagacaagactcttgagaagagtttataaatatgaggcaatcctcacctta 26366803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27219344 - 27219401
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  27219344 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 27219401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39956556 - 39956499
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||| |||| |||| | || |||||||| ||||||||||||||||||||||    
T  39956556 catcagatagacaagaatcttaagaagagtttataaagaggagacaatcctcacctta 39956499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43101460 - 43101403
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  43101460 catcagatagataggactcttgagaagagtttataaagaggaggcactcctcacctta 43101403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47833751 - 47833694
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| ||  ||||||| ||||||| || |||||||||||    
T  47833751 catcggatagataggactcttgagaagtgtttataaagaggaggcactcctcacctta 47833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54369054 - 54369107
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcac 54  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||    
T  54369054 catcggatagataggactcttgagaagagtttataaagaggaggcactcctcac 54369107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54591554 - 54591497
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||  ||| ||||||||||||||    
T  54591554 catcggatagacaagactcttgagaagagtttataaaggtgaggcaatcctcacctta 54591497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13897863 - 13897903
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagagg 41  Q
    |||| ||||||||||||| |||||||||||||||| |||||    
T  13897863 catcagatagataagacttttgataaaagtttataaagagg 13897903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18356390 - 18356350
Alignment:
Q  4 cggatagataagactcttgataaaagtttatatagaggaga 44  Q
    ||||||||||||||||||||||||| |||||| ||| ||||    
T  18356390 cggatagataagactcttgataaaaatttataaagatgaga 18356350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27177427 - 27177479
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctca 53  Q
    |||| ||||||| |||||||| |||| |||||||||||| |||||| ||||||    
T  27177427 catcagatagatgagactctttataagagtttatatagatgagacagtcctca 27177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39386685 - 39386773
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||    
T  39386685 catcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaactggttttgtaaggatgagttaggcct 39386773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17265064 - 17264975
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcctt 89  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||  | ||||| |||||||||||||||||    
T  17265064 catcggatagataagactcttggtaaaagtttatatagaggaggcaatcctcacctgatgaaccagttttttaaggatgagttaggcctt 17264975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 10485214 - 10485296
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  10485214 gataaataagactcttgatgagagtttatatagaggagacaatcctcaccttacgaaccggtttttaaggatgagttaggcct 10485296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29676309 - 29676371
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||||    
T  29676309 catcggatagataagactcttgataagagtttatatataggagtcaatcctcaccttaagaac 29676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 36264237 - 36264155
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctc-accttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||  |||||| ||||||||||||||||    
T  36264237 atagataagactcttgataagtgtttatatagaggtgacaatcctcaaccctatgaaccggtttttaaggatgagttaggcct 36264155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12431913 - 12431970
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  12431913 catcggatagataagactcttgagaagagtttataaagaggagacaatcctcacctta 12431970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3435575 - 3435488
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||  |||  ||||| | |||||||||||||||    
T  3435575 catcggatagataagactcttgagaagagtttatacagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggcc 3435488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4721893 - 4721807
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| ||| |||||||||    |||| ||||||||||||||||    
T  4721893 catcggatagattagactcttgataagagtttatatagaggaggcaatcatcaacttatgaac-caattttaaggatgagttaggcct 4721807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6986505 - 6986447
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||    
T  6986505 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttat 6986447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 883690 - 883633
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  883690 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 883633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27545205 - 27545148
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  27545205 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 27545148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31761346 - 31761403
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  31761346 catcgggtagataagactcttaataagagtttatatagaggaggcaatcctcacctta 31761403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32667198 - 32667255
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  32667198 catcagatagataagactcttgataagagtttatatagaggaggcaatccttacctta 32667255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29676167 - 29676223
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  29676167 catcgaatagataagattc--gataaaagtttatatagaggagacaatcctcaccttat 29676223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29695428 - 29695373
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||||||||||||||| || |||||||| |||| |||||||||||||||    
T  29695428 catcggatagataagactcttgagaagagtttataaagagtagacaatcctcacct 29695373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8044635 - 8044549
Alignment:
Q  1 catcggatagataagactcttgataaaagtttat-atagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttagg 85  Q
    |||| ||||||||||||||||||||| ||||||| | ||||||| || ||||||||||||||||  ||||| | |||||||||||||    
T  8044635 catcagatagataagactcttgataagagtttataaaagaggaggcactcctcaccttatgaaccagttttgtaaggatgagttagg 8044549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36264086 - 36264140
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    |||||||||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  36264086 catcggatagataaaactcttgataagtgtttatatagaggaggcaatcctcacc 36264140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6986376 - 6986429
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  6986376 ggatagataagactcttgagaggagtttataaagaggagacaatcctcacctta 6986429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12432120 - 12432177
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||| |||||| || |||||||| ||||||| ||||||||||||||    
T  12432120 catcggatagataagaatcttgagaagagtttataaagaggaggcaatcctcacctta 12432177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17727419 - 17727476
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| |||| || ||||||||||||||    
T  17727419 catcggatagataagactcttgagaagagtttataaagagaaggcaatcctcacctta 17727476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20999078 - 20999021
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  20999078 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 20999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31761147 - 31761204
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||| |||| || |||||||||||| ||| ||||||||||||||    
T  31761147 catcggatagataagacttttgagaagagtttatatagaagaggcaatcctcacctta 31761204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32810965 - 32810908
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || ||||||||| |||||||| ||||||||||||| ||||||||    
T  32810965 catcggatagataggattcttgataagagtttataaagaggagacaatcatcacctta 32810908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33986064 - 33986007
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  33986064 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 33986007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7257696 - 7257640
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||| || |||||||| ||||||  ||||||||||||||    
T  7257696 atcggatagataagactcttgagaatagtttataaagaggatgcaatcctcacctta 7257640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 17265218 - 17265274
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||||||||||| ||| |||||||||||||||  |||||||||||| ||||||    
T  17265218 atagataagactcttggtaagagtttatatagaggatgcaatcctcacctgatgaac 17265274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18607342 - 18607255
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||||| ||||||||| | || ||| |||| |||||||  ||| ||||||||| ||||  |||||| ||||||||||||||||    
T  18607342 catcggatagacaagactcttaagaagagtatataaagaggaggtaattctcaccttacgaaccggtttttaaggatgagttaggcct 18607255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 26615785 - 26615731
Alignment:
Q  117 accccctatagttccaactaaaaagacaaaatgattttgaattacctcaattgaagtaatga 178  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  26615785 accccctatagttccaactaaaaa-------tgattttgaattacctcaattgaagtaatga 26615731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 884072 - 884129
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||| |||||||||| || ||| |||| ||||||| ||||||||||||||    
T  884072 catcggatagatgagactcttgagaagagtatataaagaggaggcaatcctcacctta 884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2464619 - 2464676
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||| |||||||||||||||||||||||||| |||| ||||| |||||| ||||    
T  2464619 catcagatggataagactcttgataaaagtttataaagagaagacattcctcatctta 2464676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18901953 - 18901896
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| || || ||||||||    
T  18901953 catcggatagataagactcttgaaaagagtttataaagaggaggcactcttcacctta 18901896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19860052 - 19860109
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| |||||| |||||||    
T  19860052 catcggatagacaagactcttgagaagagtttataaagaggaggcaatccacacctta 19860109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25621374 - 25621317
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| |||||| |||| ||||||||||    
T  25621374 catcggatagataagactcttgagaagagtatataaagaggaaacaaccctcacctta 25621317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 32666996 - 32667049
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| || ||||||    
T  32666996 ggataaataagactcttgataagagtttatatagaggaggcaattcttacctta 32667049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34775372 - 34775429
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || | |||||| ||||||| ||||||||||||||    
T  34775372 catcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcacctta 34775429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 39108398 - 39108454
Alignment:
Q  29 gtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttag 84  Q
    ||||||||||||||||||||||||||||||| |||  ||||| | ||||||||||||    
T  39108398 gtttatatagaggagacaatcctcaccttataaaccggttttgtaaggatgagttag 39108454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12419853 - 12419896
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggaga 44  Q
    ||||||||||||||||||||||| || |||||||| ||||||||    
T  12419853 catcggatagataagactcttgagaagagtttataaagaggaga 12419896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 32975272 - 32975323
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||| || | |||||| |||||| |||||||||||||||    
T  32975272 atagataagactcttgagaagaatttataaagaggaaacaatcctcacctta 32975323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 936827 - 936881
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    ||||||||||||| || |||||| || |||||||| |||||||||| ||||||||    
T  936827 catcggatagataggaatcttgagaagagtttataaagaggagacactcctcacc 936881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33985858 - 33985803
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||  |||| ||||||| ||||||||||||||    
T  33985858 catcggatagataagactcttgagaagag--tataaagaggaggcaatcctcacctta 33985803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 38020997 - 38020967
Alignment:
Q  28 agtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||||||||    
T  38020997 agtttatatagaggagacaatcctcacctta 38020967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3976560 - 3976503
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| | |||||| || |||||||| ||||||| || |||||||||||    
T  3976560 catcggatagataatattcttgagaagagtttataaagaggaggcactcctcacctta 3976503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6183455 - 6183398
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| |||||||||| | |||||||||    
T  6183455 catcggatagatagtactcttgagaagagtttataaagaggagacacttctcacctta 6183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7877859 - 7877916
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  ||||| || || |||||||| |||||||||| |||||||||||    
T  7877859 catcggatagatagcactctcgagaagagtttataaagaggagacactcctcacctta 7877916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13839348 - 13839291
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || ||||| || ||| ||| ||||||||||||||    
T  13839348 catcggatagacaagactcttgagaagagtttctaaagatgaggcaatcctcacctta 13839291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16006992 - 16007049
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || ||| |||| |||||||  |||||||||||||    
T  16006992 catcggatagacaagactcttgagaagagtatataaagaggaggtaatcctcacctta 16007049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19859940 - 19859989
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcc 50  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||    
T  19859940 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcc 19859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 22447326 - 22447407
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||||||| ||||||| ||||| || ||||||  || ||||||||||||||||  ||||| |  ||||||||||||||    
T  22447326 atagataagacttttgataagagtttttaaagaggacgcactcctcaccttatgaaccagttttatagggatgagttaggcc 22447407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29684026 - 29684083
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||| ||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  29684026 catcagatagacaagactcttgagaagagtatataaagaggaggcaatcctcacctta 29684083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39108103 - 39108160
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||| |||||| ||||||||| ||||||||||||||||  |||| ||||||||    
T  39108103 catcagatatataagaatcttgataagagtttatatagaggaggtaatcatcacctta 39108160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 883866 - 883922
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||| ||||||||||| || |||||||| ||  ||| ||||||||||||||    
T  883866 atcggatagacaagactcttgagaagagtttataaaggagaggcaatcctcacctta 883922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 10849575 - 10849523
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||| | |||||||||| |||||||| ||||||| || |||||||||||    
T  10849575 gatagatagggctcttgataagagtttataaagaggaggcactcctcacctta 10849523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43169257 - 43169313
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || ||||||||||    
T  43169257 catcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctt 43169313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4563780 - 4563693
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||  |||||| |||||||| |||||||    
T  4563780 catcggatagataagacttttgataagagtttacatagaggagacaatcctcaccttatgaaccggtttttaaggatgaggtaggcct 4563693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18873283 - 18873200
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||    
T  18873283 catcggatagataagactattgataagagtttatatagaggaggcaatcctcaccttatgaaccagtttttaaggatgagttag 18873200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39268033 - 39268103
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgttttt 71  Q
    |||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||||||||| ||||||    
T  39268033 catcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaactggttttt 39268103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38376746 - 38376803
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  38376746 catcggatagataagactcttgagaagagtttataaagaggagacaatcctcacctta 38376803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28358124 - 28358067
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||    
T  28358124 catcggatagacaagactcttgagaagagtttataaagaggagacaatcctcacctta 28358067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29008087 - 29008148
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaa 62  Q
    |||||||||||||||||||||||||  ||||||||||||| || ||||||||| ||||||||    
T  29008087 catcggatagataagactcttgataggagtttatatagagaaggcaatcctcaacttatgaa 29008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35527077 - 35527020
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  35527077 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 35527020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43490345 - 43490288
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||    
T  43490345 catcggatagataagactcttgagaagagtttataaagaggagacaatcttcacctta 43490288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39268241 - 39268329
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcct 88  Q
    |||||||||||||| ||||||||||| |||||||| |  |||| || ||||||||||||||||  | ||||| ||||||||||||||||    
T  39268241 catcggatagataaaactcttgataagagtttataaattggaggcactcctcaccttatgaaccggttttttaaggatgagttaggcct 39268329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2716358 - 2716445
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||| |||||||  ||| |||||||||||||||| |||||||||| |||||||||||| | || ||||| | |||||||||||||||    
T  2716358 catcgaatagatattactgttgataaaagtttataaagaggagacactcctcaccttataagctggttttgtaaggatgagttaggcc 2716445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17135534 - 17135589
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||    
T  17135534 catcggataaataagactcttgataagagtttataaagaggagacactcctcacct 17135589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30592443 - 30592529
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttg-tttttgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||  | |  | |||||||||||||||||||||    
T  30592443 catcggatagataagactcttgagaaaagtatataaagaggag-caatcctcaccttacaagccggttttttgaggatgagttaggcc 30592529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37781933 - 37781846
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||  | || ||||| | |||||||||||||||    
T  37781933 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 37781846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48193 - 48136
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  48193 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 48136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2908651 - 2908594
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  2908651 catcggatagacaagactcttgagaatagtttataaagaggaggcaatcctcacctta 2908594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3762921 - 3762978
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||| ||||||||    
T  3762921 catcggatagataagactcttgagaagagtttataaagaggaggcaatcttcacctta 3762978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18914250 - 18914193
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||  ||||||||||| ||||||||||| | ||||||||||||||||||||    
T  18914250 catcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcacctta 18914193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18914457 - 18914400
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||  ||||||||||| ||||||||||| | ||||||||||||||||||||    
T  18914457 catcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcacctta 18914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30330664 - 30330721
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||  || | |||||||||||||||| ||||||||||||||    
T  30330664 catcggatagataagactctgaattagagtttatatagaggaggcaatcctcacctta 30330721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36878341 - 36878398
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||||||||||| ||||||| |||||||| | ||||||||||||||||||||    
T  36878341 catcagatagataagacttttgataagagtttataaacaggagacaatcctcacctta 36878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37656821 - 37656764
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  37656821 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 37656764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38131779 - 38131836
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||| |||||||||||    
T  38131779 catcggatagataggactcttgagaagagtttataaagaggagacattcctcacctta 38131836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36308011 - 36307956
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    ||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||    
T  36308011 catcggatagataagactcttga-aagagtttataaagaggagtcaatcctcacctt 36307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 48394 - 48343
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  48394 atagacaagactcttgagaaaagtttataaagaggaggcaatcctcacctta 48343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 13413605 - 13413656
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  13413605 atagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 13413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21019959 - 21019872
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||  |||||||||||||| ||||   ||||| ||||||| ||||||||    
T  21019959 catcggatatataagactcttgataagagtctatataaaagaagcaatcctcaccttaagaaccgatttttaaggatgacttaggcct 21019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11632446 - 11632504
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||||||||| ||||||||||| || |||||||| ||| ||| |||||||||||||||    
T  11632446 catcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttat 11632504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30870974 - 30870916
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||||||| |||||| || |||||||| ||||||  |||||||||||||||    
T  30870974 catcggatagataagattcttgagaagagtttataaagaggaagcaatcctcaccttat 30870916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 873785 - 873728
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  873785 catcggatagataggactcttgagaagagtttatagagaggaggcattcctcacctta 873728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 10668381 - 10668433
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||| ||||||||||| |||||| | |||||||||| ||||||||||||    
T  10668381 atagataaaactcttgataagagtttacaaagaggagacactcctcaccttat 10668433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34457112 - 34457168
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||| ||||||||||| || |||||||| ||||||  ||||||||||||||    
T  34457112 atcggatagacaagactcttgagaagagtttataaagaggatgcaatcctcacctta 34457168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43490552 - 43490496
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    ||||||||||| ||||||||||| || |||||||| |||| ||||||| ||||||||    
T  43490552 catcggatagacaagactcttgagaagagtttataaagagaagacaatactcacctt 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1028182 - 1028095
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||  |||  ||||| ||| |||||||||||||    
T  1028182 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaaaccggttttgtgacgatgagttaggcc 1028095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15510593 - 15510538
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacct 56  Q
    ||||||||||| | ||||||||| || |||||||| ||||||| ||||||||||||    
T  15510593 catcggatagacacgactcttgagaagagtttataaagaggaggcaatcctcacct 15510538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40168948 - 40168861
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||| |||||||||||||||||| || ||| |||| ||||||| ||||||||| ||||  | || ||||| | |||||||||||||||    
T  40168948 catcagatagataagactcttgagaagagtatataaagaggaggcaatcctcatcttacaagctggttttgtaaggatgagttaggcc 40168861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8812743 - 8812701
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggag 43  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  8812743 catcggataaataagactcttaataagagtttatatagaggag 8812701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18107848 - 18107906
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    ||||| || ||||||||||||||||| | |||||| ||||||| || ||||||||||||    
T  18107848 catcgaatcgataagactcttgataagaatttataaagaggaggcactcctcaccttat 18107906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22196642 - 22196588
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||| || |||||    
T  22196642 catcggatagatatgactcttgagaagagtttataaagaggagacactcatcacc 22196588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32501226 - 32501284
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||||||||||||||||| ||||| || | |||||||| || |||| ||||    
T  32501226 catcggatagataagactcttgataagagtttgtaaaaaggagacattcgtcactttat 32501284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2908858 - 2908801
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||| |||||| |||| || |||||||| ||||||| ||||||||||||||    
T  2908858 catcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcacctta 2908801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34457318 - 34457375
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||  |||| |||||||||    
T  34457318 catcggatagacaagactcttgagaagagtttataaagaggatgcaattctcacctta 34457375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37995723 - 37995666
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  37995723 catcggatagatagcactcttgagaagagtttataaagaggaggcattcctcacctta 37995666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40169130 - 40169073
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| |||||||||||||||||| || ||| |||| ||||||| |||| |||||||||    
T  40169130 catcagatagataagactcttgagaagagtatataaagaggaggcaattctcacctta 40169073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3015710 - 3015654
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctt 57  Q
    |||||||||||| ||||||||||| | |||| ||| ||||||| ||| |||||||||    
T  3015710 catcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcacctt 3015654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 15287069 - 15287125
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||| ||  || |||  ||||||| ||||||||||||||    
T  15287069 atcggatagataagactcttgagaagggtatattaagaggaggcaatcctcacctta 15287125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19292007 - 19291921
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttg--aggatgagttaggc 86  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||| |||||  ||||||||||||||    
T  19292007 catcggatagataagactcttgataagagtttgtatagaggagacaatcctcaccttat-aagttggttttgtaaggatgagttaggc 19291921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26394566 - 26394653
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttaggcct 88  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||   ||||| || |||| ||||||||    
T  26394566 catcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttaagaaccgatttttaagaatgacttaggcct 26394653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26098357 - 26098444
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||   |||| | |||||||||||||||    
T  26098357 catcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaaggatgagttaggcc 26098444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25998832 - 25998894
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||    
T  25998832 catcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaac 25998894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24558803 - 24558890
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||  | || ||||| | |||||||||||||||    
T  24558803 catcggatagataagactctttagaagagtttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttaggcc 24558890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25999038 - 25999125
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||| ||||||||||||||||  ||||| | || ||||||||||||    
T  25999038 catcggattgataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggcc 25999125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26098769 - 26098856
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||| ||||||||||||||||  ||||| | || ||||||||||||    
T  26098769 catcggattgataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggcc 26098856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28149808 - 28149865
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||    
T  28149808 catcggatagataaaactcttgataagagtttataaagaggaggcaatcctcacctta 28149865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25184018 - 25184072
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacc 55  Q
    |||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||    
T  25184018 catcggatagataagattcttgataagagtttataaagagaagacaatcctcacc 25184072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3713213 - 3713270
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||| |||||||||| ||||||  |||||||||||||||| ||||||||||||||    
T  3713213 catcggaaagataagacttttgataggagtttatatagaggaggcaatcctcacctta 3713270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5269362 - 5269305
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| |||| || ||||||||||||||    
T  5269362 catcggatagataagactcttgagaagagtttataaagagaaggcaatcctcacctta 5269305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11313471 - 11313414
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||||||||||    
T  11313471 catcggatagataagactcttgagaagagtatataaagaggaggcaatcctcacctta 11313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15101200 - 15101143
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  15101200 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 15101143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16877099 - 16877042
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  16877099 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 16877042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 26098572 - 26098625
Alignment:
Q  10 gataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaac 63  Q
    |||||||||| |||||| |||||||| |||||||||| ||||||||||||||||    
T  26098572 gataagactcatgataatagtttataaagaggagacactcctcaccttatgaac 26098625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30539250 - 30539307
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| |||||||| ||  |||||| |||||||||||    
T  30539250 catcggatagataagactcttgataagagtttataaaggcgagacactcctcacctta 30539307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 21110059 - 21110003
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttat 59  Q
    |||||||||||||| ||||| ||| |||||||||||||||| |||||| ||||||||    
T  21110059 tcggatagataagattcttggtaagagtttatatagaggaggcaatccccaccttat 21110003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24558598 - 24558685
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||| |||||||||||||||||| || ||| |||| ||||||| ||||||||||||||  | |  ||||| |||||||||||||||||    
T  24558598 catcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggcc 24558685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 29742514 - 29742468
Alignment:
Q  12 taagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  29742514 taagactcttgatgaaagtttataaagaggaggcaatcctcacctta 29742468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31962 - 31905
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| || |||||| ||||    
T  31962 catcggatagataagactcttgataagagtttataaagacgaggcactcctcaactta 31905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 16876915 - 16876862
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  16876915 ggatagacaagactcttgagaatagtttataaagaggaggcaatcctcacctta 16876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19712493 - 19712436
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||||||||  |||||| |||||| |||||||    
T  19712493 catcggatagataagactcttgagaatagtttataaggaggaggcaatccccacctta 19712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 19712696 - 19712611
Alignment:
Q  3 tcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||||||  |||||||| || |||||||| ||||||| ||||||||||||||  | || ||||| | |||||||||||||||    
T  19712696 tcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 19712611  T

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Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23591544 - 23591601
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||| ||||||||||| |||||| ||||||||||||| |||||||| || ||||||||    
T  23591544 catcagatagataagattcttgagaaaagtttatataaaggagacactcttcacctta 23591601  T

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Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25184225 - 25184282
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||| || ||||||||| |||||||| ||||||  ||||||||||||||    
T  25184225 catcggatagataggattcttgataagagtttataaagaggaagcaatcctcacctta 25184282  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12134572 - 12134485
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    |||||||||||||  |||||||| || |||||||| |||||||||| |||| ||||||  |||  ||||| | |||||||||||||||    
T  12134572 catcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccggttttgtaaggatgagttaggcc 12134485  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 29256525 - 29256474
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||| | |||| |||||| ||| ||||||||||||||||||    
T  29256525 atagataagactcttcagaaaaatttataaagatgagacaatcctcacctta 29256474  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 4654558 - 4654600
Alignment:
Q  7 atagataagactcttgataaaagtttatatagaggagacaatc 49  Q
    |||||||||| ||||||||| |||||||| |||||||||||||    
T  4654558 atagataagattcttgataagagtttatacagaggagacaatc 4654600  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 5592714 - 5592664
Alignment:
Q  34 tatagaggagacaatcctcaccttatgaacttgtttttgaggatgagttag 84  Q
    |||||||||||||||||||| ||| |||||  |||||| ||||||||||||    
T  5592714 tatagaggagacaatcctcaacttttgaaccggtttttaaggatgagttag 5592664  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2902835 - 2902879
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagaca 46  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  2902835 catcggatagataagactcttcataagagtttata-agaggagaca 2902879  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6623514 - 6623457
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || ||| |||| || || | ||||||||||||||    
T  6623514 catcggatagataagactcttgagaagagtatataaagtgggggcaatcctcacctta 6623457  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8144032 - 8144089
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  |||||||| || |||||||| ||||||| || |||||||||||    
T  8144032 catcggatagatagcactcttgagaagagtttataaagaggaggcactcctcacctta 8144089  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10418427 - 10418370
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||  ||||||||| | |||||||| ||||||| || |||||||||||    
T  10418427 catcggatagatagcactcttgatgagagtttataaagaggaggcactcctcacctta 10418370  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 10733519 - 10733470
Alignment:
Q  9 agataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||| |||||||| || |||||||| |||||||||| |||||||||||    
T  10733519 agataacactcttgagaagagtttataaagaggagacactcctcacctta 10733470  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19054508 - 19054565
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||| |||||||| || |||||||| ||| ||| || |||||||||||    
T  19054508 catcggatagataacactcttgagaagagtttataaagatgaggcactcctcacctta 19054565  T

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Target: scaffold0153 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 2071 - 2132
Alignment:
Q  117 accccctatagttccaactaaaaagacaaaatgattttgaattacctcaattgaagtaatga 178  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2071 accccctatagttcctactaaaaagacgaaatgattttgaattacctcaattgtagtaatga 2132  T

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Target: scaffold1138 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 2164 - 2111
Alignment:
Q  5 ggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  2164 ggatagataaaactcttgataagagtttatatagaggaggcaatcctcacctta 2111  T

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Target: scaffold1138; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1962 - 1905
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||||||||||||||||||| ||||||||  |||||| || || ||||||||    
T  1962 catcggatagataagactcttgataagagtttataccgaggaggcactcttcacctta 1905  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 76867 - 76924
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  76867 catcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctta 76924  T

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Target: scaffold0434 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13321 - 13408
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||  | |  ||||| |||||||||||||||||    
T  13321 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggcc 13408  T

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Target: scaffold0434; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13529 - 13585
Alignment:
Q  2 atcggatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    |||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  13529 atcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta 13585  T

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Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21352 - 21264
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttttg--aggatgagttaggcct 88  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||||  || ||| |||||  ||||||||||||||||    
T  21352 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctta-caagttggttttgtaaggatgagttaggcct 21264  T

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Target: scaffold0989 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3036 - 2949
Alignment:
Q  1 catcggatagataagactcttgataaaagtttatatagaggagacaatcctcaccttatgaacttgtttt-tgaggatgagttaggcc 87  Q
    ||||||||||| ||||||||||| || |||||||| ||||||| |||||||||| |||  | || ||||| | |||||||||||||||    
T  3036 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttaggcc 2949  T

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Target: scaffold1112 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 1319 - 1267
Alignment:
Q  6 gatagataagactcttgataaaagtttatatagaggagacaatcctcacctta 58  Q
    ||||||||||||||||||||| |||||||| |||| ||||| || ||||||||    
T  1319 gatagataagactcttgataagagtttataaagagaagacactcatcacctta 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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