View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9223_low_3 (Length: 635)
Name: NF9223_low_3
Description: NF9223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9223_low_3 |
 | |
|
| [»] chr3 (34 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| |
|
| [»] chr2 (1 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 403; Significance: 0; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 19 - 635
Target Start/End: Original strand, 10034307 - 10034920
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10034307 |
ccctcaagtggactacccacttcattgcaatcacttcatattgtaaaatgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
10034406 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
10034407 |
ttgtgagtctttatttaattcatagttgtgatg---cacttacatcctttccacttgatggtttccctgtcctccaaacacttcagatatggaattgtag |
10034503 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |
|
|
| T |
10034504 |
gagtctggtttccatttatatttcagaaaggtcttcacctcggtcgtcgagcctcgaatcacttcatatcgaatcccatgattcaattgaattatttgaa |
10034603 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034604 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
10034703 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
10034704 |
aatcaattacgatttcatcccaaagaacaaagccatctgtaacggaatggggtctccaatatttgacagcactttccaacttgagtattgaaaagggtga |
10034803 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| || |||||||||||||||||||||||||| |
|
|
| T |
10034804 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagtcctttgatggaaat |
10034903 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10034904 |
gggcttcgacacctctc |
10034920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 19 - 635
Target Start/End: Original strand, 9841162 - 9841775
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9841162 |
ccctcaagtggtctacccacttcattgcaatcacttcatattcgtagttgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
9841261 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||||||||||| |||||| | || ||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
9841262 |
ttgtgagtcttcagttatggtggagctgtgat---acacttacatccttcccacttgatggtttccctgcgctccaaacacttaccatacttgattgtag |
9841358 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
9841359 |
gagtctagattccatttatatttcagaaaggtcttcacctctgtcgtcgagcctcgaatcacttataatcgaatcccatgattcaattgaattatttgaa |
9841458 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9841459 |
gtcaagcttaagatggacatgctcacagctcttgaaatgttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
9841558 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| | ||||| |||||| |||| ||| | || ||||||||||||| |||||||||||| |||||||||| ||| |||||| |||||||| |
|
|
| T |
9841559 |
aatcaattgctatttctacccaaaaaacagcaccgccggttacggaatggggtcaccaatatttgacggcactttcctacttgcgaattgataagggtga |
9841658 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
9841659 |
tgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtctctaaatatcagggatctctctgaaatgaagtcctttgatggaaat |
9841758 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
9841759 |
gggcttcgacacctctc |
9841775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 19 - 634
Target Start/End: Original strand, 10129229 - 10129838
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10129229 |
ccctcaagtggactacccacttcattgcaatcacttcatattgaaaaatgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
10129328 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
|||||||| || ||||| |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
10129329 |
ttgtgagtattgatttacggagtagttgtgatg---cacttacatcctttccacttgatggtttccctgcgctccaaacacttaccatacataattgtag |
10129425 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
10129426 |
gagtctggattccatttatatttcagaaaggtcttcacctcggtcgtc---cctcaaatcactttatatcatatcccatgattcaattgaattatttgaa |
10129522 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10129523 |
gtcaagcttaagattgacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
10129622 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| ||| ||| |||||||| ||| |||| || ||||||||||| ||| ||||||| || ||||| ||||| |||| ||||||||| |
|
|
| T |
10129623 |
aatcaattgagatacagtccaaaagaacagcaccgcctgtgacagaatggggtcttcaagatttgaccgctctttcaagattgagtattggaaagggtga |
10129722 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| || |||||||||||||||||||||||||| |
|
|
| T |
10129723 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagtcctttgatggaaat |
10129822 |
T |
|
| Q |
619 |
gggcttcgacacctct |
634 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10129823 |
gggcttcgacacctct |
10129838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 19 - 635
Target Start/End: Original strand, 10519789 - 10520402
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10519789 |
ccctcaagtggtctacccacttcattgcaatcacttaatattcaatgttgtgagaatttatccttccttcctcctgaaacgtggatcaattacacatcac |
10519888 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||||||||| | || | | || ||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| || || |
|
|
| T |
10519889 |
ttgtgagtcttaagttctatcgtagctgtgat---acacttacatcctttccactcgatggtttccctgcgctccaaacacttaccatatgtgagtgcag |
10519985 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
10519986 |
gagtctggattccatttatatttcagaaaggtcttcacctcggtcgtcgagcctcgaatcacttgagatcatatcccctgattcaattgaattatttgaa |
10520085 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
10520086 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgactctagattgtgtagagttgtcattttgtgaaggagtttgtctacctcccaaattgc |
10520185 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
||||||||| |||||| |||||| |||| ||| | || |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
10520186 |
aatcaattaagatttctacccaaaaaacagcaccgccggttacggaatggggtctccaatatttgacagcactttccgacttgggtattgtaaagggtga |
10520285 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
10520286 |
tgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgactctaactatcagggatctctctgaaatgaagtcctttgatggaaaa |
10520385 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
10520386 |
gggcttcgtcacctctc |
10520402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 22 - 635
Target Start/End: Complemental strand, 10431803 - 10431193
Alignment:
| Q |
22 |
tcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10431803 |
tcaagtggtctacccacttcattgcaatcacttgaaattgaaaaatgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcacttg |
10431704 |
T |
|
| Q |
122 |
tgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggag |
221 |
Q |
| |
|
| |||||| |||||||||| |||||| | | ||||||||||||||||||| |||||||||||||| |||||| |||| |||| | |||| || || |
|
|
| T |
10431703 |
tcagtctttatttatggagcagttgtgatt---cacttacatcctttccactcgatggtttccctgccctccaattacttgacatatttaattgcagaag |
10431607 |
T |
|
| Q |
222 |
tctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtc |
321 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10431606 |
tctggattccatttatatttcagaaaggtcttcacctcggtcgtcgagcctcgaatcactttatatcagatcccattattcaattgaattatttgaagtc |
10431507 |
T |
|
| Q |
322 |
aagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaat |
421 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||| || | |||||| | || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10431506 |
aagcttaagatggacatgctcaccgctcttgaaaagttgcatatgaaatgtcaaaagctgtcattttgtgaaggagtttgtctacctcccaaattacaat |
10431407 |
T |
|
| Q |
422 |
caattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatga |
521 |
Q |
| |
|
||||| | ||||||| | ||||| || || | || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10431406 |
caatttggttttcatctcgaagaataactccgccggttacggaatggggtctccaatatttgacagcactttccttattgacaattcaaaagggtgatga |
10431307 |
T |
|
| Q |
522 |
tatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatggg |
621 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10431306 |
tatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcactgatctctctgaaatgaagtcctttgatggaaatggg |
10431207 |
T |
|
| Q |
622 |
cttcgacacctctc |
635 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
10431206 |
ctgcgacacctctc |
10431193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 19 - 635
Target Start/End: Original strand, 10263005 - 10263618
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10263005 |
ccctcaagtggtctacccacttcattgcaatcacttgaaattgtaaattgtgagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
10263104 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||||||||| | ||| | || ||| | | ||||||||||||||||||| |||||||||||||| |||||||||||| |||| || | ||||| |
|
|
| T |
10263105 |
ttgtgagtcttgagttaaatcgtagctgtgatt---cacttacatcctttccactcgatggtttccctgccctccaaacacttgacatatataagtgtag |
10263201 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
10263202 |
aagtctggattccatttatattttagaaaggtcttcacctcggtcgtcgagcctcgaatcacttactatcaaatcccatgattcaattgaattatttgaa |
10263301 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10263302 |
gtcaagcttaagatggaaatgctcaccgctcttgaaaggttgtttctaacatgtgcagagttgtcattttctgaaggagtttgtctacctcccaaattac |
10263401 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| |||||| |||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
10263402 |
aatcaattgagatttctacccaaaaaacaacaccgccggttacggaatggggtctccaatatttgacagcactttcctacttgactattcaaaagggtga |
10263501 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| | || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
10263502 |
tgatatatttaacaccttgatgaaggagtcattgctacccatctcccttttgtatctacgtgtctttgatctctctgaaatgaagtcctttgatggaaat |
10263601 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
10263602 |
gggcttcaacacctctc |
10263618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 19 - 575
Target Start/End: Original strand, 10665770 - 10666323
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10665770 |
ccctcaagtggtctacccacttcattgcaatcacttaatattttgtggtgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
10665869 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||| |||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
10665870 |
ttgtgcgtctagatttatgtcaaagttgtgatg---cacttacatcctttccacttgatggtttccctgcgctccaaacactttggatacagaattgtag |
10665966 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10665967 |
gagtctggtttccatttgtattttagaaagtccttcatgtcagtcgtcgagactcgaagaacttgtgatcagatcccatgattcaattgaattatttgaa |
10666066 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10666067 |
gtcaagcttaagatggacatgctcactgctcttgaaaagttgattctaagatgtgcacagttgtcattttgtgaaggagtttgtctacctcccaaattac |
10666166 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|| ||||| ||||||||| ||||||| || || | || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
10666167 |
aaacaattgtgatttcatctcaaagaataactccgccggttacggaatggggtctccaatatttgacagcactttcctacttgagtattgaaaagggtga |
10666266 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctct |
575 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10666267 |
tgatatatttaacaccttgatgaaggagtcgttgctacccatatcccttgtgtctct |
10666323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 19 - 635
Target Start/End: Complemental strand, 10361566 - 10360953
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10361566 |
ccctcaagtggtctacccacttcattgcaatcacttcatattgaaaattgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
10361467 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
|||||| ||| |||||| || ||| | ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
10361466 |
ttgtgactctacatttagatcatagctgtggtt---cacttacatcctttccactcgatggtttccctgcgctccgaacacttaccatacgtgattgtag |
10361370 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
10361369 |
gagtctggattccatttatatttcagaaaggtcttcacctcggtcgtcgagcctcgaatcacttataatcatatcccatgattcaattgaattatttgaa |
10361270 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||||| |||||| |||| | || |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10361269 |
gtcaagcttaagatggacacgcttgccgctcttgaacggttgactctagattggccagagttgtcgttttgtgaaggagtttgtctacctcccaaattac |
10361170 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
||||||||| ||| ||| |||||||| || |||| || ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
10361169 |
aatcaattatgatacagtccaaaagaacagcactgcctgtgacagaatggggtctccaatatttgacagcactttccaacttgggtattggaaagggtga |
10361070 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
10361069 |
tgatatagttaacaccttgatgaaggagtcattgctacccgtctcccttgtgtctctggaaatccatcatctctctgaaatgaagtcctttgatggaaat |
10360970 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10360969 |
gggcttcgacacctctc |
10360953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 635
Target Start/End: Complemental strand, 10373607 - 10372994
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
10373607 |
ccctcaagtggtctacccacttcattgcaatcacttgaaattagatactgtgagaatttatccttccttcctcttgaaatgtggagcaattacacatcac |
10373508 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||| | ||| |||||| | || ||| | | |||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
10373507 |
ttgtgtggctttatttatatcgtagctgtgatt---cacttatatcctttccacttgatggtttccctgtcctccaaacacttatgatactgaattgtag |
10373411 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
10373410 |
gaatctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttcagatcttctcccatgcttcaattgaattatttgaa |
10373311 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10373310 |
gtcaagcttaagatggacatgctcaccgctcttgaaaggttgagtttgggatgtcgagagttgtcattttgtgaaggagtttgtctacctctcaaattac |
10373211 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| ||||||||| | ||||| || ||| | || |||||||||||||||||| || | ||||| || || |||| ||| ||||| ||| |
|
|
| T |
10373210 |
aatcaatttggatttcatctcgaagaataacaccgccggttacggaatggggtctccaagatctaacagctctgtcaagcttgagtattagaaaggatga |
10373111 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
10373110 |
tgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgcatctacgtatcaattatctctctgaaatgaagtcctttgatggaaat |
10373011 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10373010 |
gggcttcgacacctctc |
10372994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 22 - 634
Target Start/End: Original strand, 9852046 - 9852655
Alignment:
| Q |
22 |
tcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| |
|
|
| T |
9852046 |
tcaagtggtctacccacttcattgcaatcacttgatattgaaaattgtgagaatttatccttcctacctcctgaaacatggagcaactacacatcacttg |
9852145 |
T |
|
| Q |
122 |
tgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggag |
221 |
Q |
| |
|
||||||||| || | | || ||| | | |||||| |||||||||||| ||||||||||||| ||||||||||||| ||| ||||||| || || |
|
|
| T |
9852146 |
tgagtcttcggttctatcgtagctgtgatt---cacttaaatcctttccactcgatggtttccctgtgctccaaacacttgacattgatgattggagaag |
9852242 |
T |
|
| Q |
222 |
tctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtc |
321 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||||||||||| |||||| |||||||| ||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
9852243 |
tctggattccatttatattttagaaaggtcttcacctcggtcgtcaagcctccaatcacttcggatcaaatcccataattcaattgaattatttgaagtc |
9852342 |
T |
|
| Q |
322 |
aagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaat |
421 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| || | ||||| | |||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
9852343 |
aagcttaagatggacatgctcaccgctcttgaagatttgcatatgaaatgccaaaagttgtcattttctgaaggagtttgtctacctcccaaattaagaa |
9852442 |
T |
|
| Q |
422 |
caattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatga |
521 |
Q |
| |
|
||||| |||||| || ||| |||| ||| | || ||||||||||||||||||||||||||||| ||||| | |||| |||| |||||||||||| |
|
|
| T |
9852443 |
caattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctccaatatttgacagctctttcatcattgtggattgtaaagggtgatga |
9852542 |
T |
|
| Q |
522 |
tatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatggg |
621 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
9852543 |
tatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctaaatatcatggttctctctgaaatgaagtcctttgatggaaatggg |
9852642 |
T |
|
| Q |
622 |
cttcgacacctct |
634 |
Q |
| |
|
||||||||||||| |
|
|
| T |
9852643 |
cttcgacacctct |
9852655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 635
Target Start/End: Original strand, 10091097 - 10091705
Alignment:
| Q |
18 |
accctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10091097 |
accctcaagtggtctacccacttcattgcaatcaattgaaattgaattttgtttgaatttatccttcctacctcctgaaacgtggagcaattacacatca |
10091196 |
T |
|
| Q |
118 |
cttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgta |
217 |
Q |
| |
|
|||||||| ||| ||||| | || ||| | |||||||||||||||||||||||||||||||||||||| || |||||| |||| ||| ||||| |
|
|
| T |
10091197 |
cttgtgagactttatttaagtcatagctgtgatg---cacttacatcctttccacttgatggtttccctgcgctcaaatcacttaccatagatggttgta |
10091293 |
T |
|
| Q |
218 |
ggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttga |
317 |
Q |
| |
|
| ||||||||||||||| | ||| ||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
10091294 |
gtagtctggattccattaatgttttagaaatgtcttcacctcggtcctcgagcctccaatatcttgagatcagatcccatgattcaattgaattgtttaa |
10091393 |
T |
|
| Q |
318 |
agtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgt---gcagagttgtcattttgtgaaggagtttgtctacctcccaaa |
414 |
Q |
| |
|
|||||||||| ||||| || |||||| || ||||| | |||| ||| |||||| | || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10091394 |
agtcaagcttcagatgaactcgctcaccgcccttgagaagttgtttctgaaatgtcgaggagtgttgtcattttgtgaaggagtttgtctacctcccaaa |
10091493 |
T |
|
| Q |
415 |
ttacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagg |
514 |
Q |
| |
|
|||||| ||| |||| ||| ||| || || ||| | || |||||||||||||||||| || | || | |||||| ||||| ||| || ||| |
|
|
| T |
10091494 |
ttacaaaagattgttattttttccaaaaaaataacaccgccggttacggaatggggtctccaagatctaaccactctttccgaattgatgattaaagagg |
10091593 |
T |
|
| Q |
515 |
gtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatgg |
614 |
Q |
| |
|
| |||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||| |||||| || | ||||||||||||||||| |
|
|
| T |
10091594 |
caggtgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctg---------gatctctataagatgaagtcctttgatgg |
10091684 |
T |
|
| Q |
615 |
aaatgggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10091685 |
aaatgggcttcgacacctctc |
10091705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 635
Target Start/End: Complemental strand, 11779747 - 11779134
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||| || ||| |||||||||||||||||||||| |||| |
|
|
| T |
11779747 |
ccctcaagtggtctacccacttcattgcaatcacttcatattaaagattgtgagaacttatcctttctaccttctgaaacgtggagcaattacacttcac |
11779648 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
||||||||||| |||||||||| |||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||| | || ||||||||| |
|
|
| T |
11779647 |
ttgtgagtctttatttatggagtagttgtgatg---cacttacatccttcccacttgatggtttccctgtgctccaaacacttgacttaagtgattgtag |
11779551 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||| | ||||| |||||||||||||||| ||||||||| ||| || |
|
|
| T |
11779550 |
gagtctggattccatttatattttagaaacaccttcacctcagtcgtcgagcctccgacatcttgaaatcagatcccatgatttaattgaattgtttaaa |
11779451 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||| |||| || |||||| |||||||| | |||| ||| || | || ||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11779450 |
gtcaagcttcggatgaactcgctcactgctcttgagaagttgtttctgaatcaaggagtgttttcattttgtgaaagagtttgtctacctcccaaattac |
11779351 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| || || ||||||| ||||| |||| | || || ||||||||||||||| | || | ||||| | || |||| ||| | ||| |
|
|
| T |
11779350 |
aatcaattgtgagtttttcccaaataacaacaccaccagttacagaatggggtctccaaaaccaaaccactctttcagaactggttattggaaatgatga |
11779251 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
| ||||||| | ||||||||||||||| | |||||||| |||||||||||| ||| ||||| ||||||| |||||||||||||||| ||||||||| |
|
|
| T |
11779250 |
taatatagtcaccaccttgatgaaggatttgttgctacctatctcccttgtggacctgtctatcattgatctctatgaaatgaagtccttcgatggaaat |
11779151 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
11779150 |
gggcttcgacacctctc |
11779134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 18 - 635
Target Start/End: Original strand, 10197979 - 10198587
Alignment:
| Q |
18 |
accctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10197979 |
accctcaagtggtctacccacttcattgcaatcaattgaaattgaattttgtttgaatttatccttcctacctcctgaaacgtggagcaattacacatca |
10198078 |
T |
|
| Q |
118 |
cttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgta |
217 |
Q |
| |
|
|||||||| ||| ||||| | || ||| | |||||||||||||||||||||||||||||||||||||| || |||||| |||| ||| ||||| |
|
|
| T |
10198079 |
cttgtgagactttatttaagtcatagctgtgatg---cacttacatcctttccacttgatggtttccctgcgctcaaatcacttaccatagatggttgta |
10198175 |
T |
|
| Q |
218 |
ggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttga |
317 |
Q |
| |
|
| ||||||||||||||| | ||| ||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
10198176 |
gtagtctggattccattaatgttttagaaatgtcttcacctcggtcctcgagcctccaatatcttgagatcagatcccatgattcaattgaattgtttaa |
10198275 |
T |
|
| Q |
318 |
agtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgt---gcagagttgtcattttgtgaaggagtttgtctacctcccaaa |
414 |
Q |
| |
|
|||||||||| ||||| || |||||| || ||||| | |||| ||| |||||| | | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10198276 |
agtcaagcttcagatgaacgcgctcaccgcccttgagaagttgtttctgaaatgtcgaggactgttgtcattttgtgaaggagtttgtctacctcccaaa |
10198375 |
T |
|
| Q |
415 |
ttacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagg |
514 |
Q |
| |
|
|||||| ||| |||| ||| ||| || || ||| | || |||||||||||||||||| || | || | |||||| ||||| ||| || ||| |
|
|
| T |
10198376 |
ttacaaaagattgttattttttccaaaaaaataacaccgccggttacggaatggggtctccaagatctaaccactctttccgaattgatgattaaagagg |
10198475 |
T |
|
| Q |
515 |
gtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatgg |
614 |
Q |
| |
|
| |||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||| |||||| || | ||||||||||||||||| |
|
|
| T |
10198476 |
caggtgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctg---------gatctctataagatgaagtcctttgatgg |
10198566 |
T |
|
| Q |
615 |
aaatgggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10198567 |
aaatgggcttcgacacctctc |
10198587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 23 - 635
Target Start/End: Original strand, 11771542 - 11772151
Alignment:
| Q |
23 |
caagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgt |
122 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| ||| |||| |||||||| || ||| |||||||||||||| ||||||| |||||||| |
|
|
| T |
11771542 |
caagtggtctacccacttcattgcaaatacttcatattaaagattgtgagaacttatcctttctaccttctgaaacgtggagctattacacttcacttgt |
11771641 |
T |
|
| Q |
123 |
gagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagt |
222 |
Q |
| |
|
||||||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| || |||||| |||| ||| |||||| ||| |
|
|
| T |
11771642 |
gagtctttatttatggagtagttgtgatg---cacttacatcctttccacttgatggtttccctgcgctcaaatcacttaccatagatggttgtagtagt |
11771738 |
T |
|
| Q |
223 |
ctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtca |
322 |
Q |
| |
|
|||||||||||| | ||| ||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
11771739 |
ctggattccattaatgttttagaaatgtcttcacctcggtcctcgagcctccaatatcttgagatcagatcccatgattcaattgaattgtttaaagtca |
11771838 |
T |
|
| Q |
323 |
agcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatc |
422 |
Q |
| |
|
||||| |||| || ||| || |||||||| | |||| ||| || | || ||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11771839 |
agcttcggatgaactcgcttaccgctcttgagaagttgtttctgaatcaaggagtgttttcattttgtgaaggagtttgtctacctcccaacttacaatc |
11771938 |
T |
|
| Q |
423 |
aattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgat |
522 |
Q |
| |
|
|||| || || ||||||| ||||| |||| | || || ||||||||||||||| | || | ||||| |||| |||| ||| | |||| || |
|
|
| T |
11771939 |
aattgtgagtttttcccaaataacaacaccaccagttacagaatggggtctccaaaaccaaaccactctttcgaaattggttattggaaatgatgataat |
11772038 |
T |
|
| Q |
523 |
atagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggc |
622 |
Q |
| |
|
||||| | |||||||||||| |||| ||||| || |||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
11772039 |
atagtcaccaccttgatgaaagagttgttgctgcctatctcccttgtggacctgtctatcattgatctctatgaaatgaagtcttttgatggaaatgggc |
11772138 |
T |
|
| Q |
623 |
ttcgacacctctc |
635 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11772139 |
ttcgacacctctc |
11772151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 27 - 629
Target Start/End: Original strand, 10502894 - 10503493
Alignment:
| Q |
27 |
tggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgtgagt |
126 |
Q |
| |
|
||||||||||||||| ||||| |||||| |||| |||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
10502894 |
tggtctacccacttctttgcagtcacttagtattaaaaggtgtgagaatttatcctttcttcctgctgaaacgtggagcaattacacattgcttgtgagt |
10502993 |
T |
|
| Q |
127 |
cttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagtctgg |
226 |
Q |
| |
|
||| |||||||||| || ||| | ||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| | | ||||||| | ||| |
|
|
| T |
10502994 |
cttgatttatggagtagctgtgatgg---actaacatcctttccacttgatggtttccctgcactccaaagacttaacattagtaactgtaggaatttgg |
10503090 |
T |
|
| Q |
227 |
attccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtcaagct |
326 |
Q |
| |
|
||||||||| || || | ||||||||| || | | ||||||||| |||||||| | ||| ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
10503091 |
attccatttttactttaaaaagtcctttacaccaatattcgagcctccaatcacttcatatccaatcccatgattcagttgaatcatttgaagtcaagct |
10503190 |
T |
|
| Q |
327 |
taagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaatt |
426 |
Q |
| |
|
| ||||| ||| |||||| ||||||||| |||| | | | ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10503191 |
tcagatgaacacgctcacggctcttgaagagttggacttggattgtcaggagttatcattttgtgaaggagtttgtcttcctcccaaattacaatcaatt |
10503290 |
T |
|
| Q |
427 |
acgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatag |
526 |
Q |
| |
|
|||| ||||||||||||| | | || ||| | |||||||||| || || |||| || ||||| | ||| ||||| | |||||||||||| |
|
|
| T |
10503291 |
gatatttggtcccaaagaacaacaactcctataatgaaatggggtcttgaagatctgaccgctctttcaagactgaaaattggagcaggtgatgatatat |
10503390 |
T |
|
| Q |
527 |
ttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcg |
626 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10503391 |
ttaacaccttgatgaaggagtcgttgcttcccatctcccttgcatctctatatatcagtgatctctatgaaatgaagtcctttgatggaaatgggcttcg |
10503490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 322 - 635
Target Start/End: Original strand, 9980070 - 9980383
Alignment:
| Q |
322 |
aagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaat |
421 |
Q |
| |
|
|||||||||||||| |||||| | || ||||||| ||| || | ||||| | |||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
9980070 |
aagcttaagatggaaatgctctccgcccttgaaaatttgcatatgaaatgccaaaagttgtcattttctgaaggagtttgtctacctctcaaattacaat |
9980169 |
T |
|
| Q |
422 |
caattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatga |
521 |
Q |
| |
|
||||| |||||| || ||| |||| ||| | || |||||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||| |
|
|
| T |
9980170 |
caattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctccaatatttgacagcacttttcgacttgagaattgtaaagggtgatga |
9980269 |
T |
|
| Q |
522 |
tatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatggg |
621 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9980270 |
tatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatctacgtatctgtgatctctctgaaatgaagtcctttgatggaaatggg |
9980369 |
T |
|
| Q |
622 |
cttcgacacctctc |
635 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
9980370 |
ctgcgacacctctc |
9980383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 302 - 635
Target Start/End: Original strand, 10583097 - 10583430
Alignment:
| Q |
302 |
caattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttg |
401 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||| || | ||||| | |||||||||||| |||||||||||| |
|
|
| T |
10583097 |
caattgaattatttgaagtcaagtttaagatggaaatgctcaccgctcttgaaaatttgcatatgaaatgccaaaagttgtcattttctgaaggagtttg |
10583196 |
T |
|
| Q |
402 |
tctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattg |
501 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||| |||||| |||| ||| | || ||||||||||||||| || || | ||||| ||||| | | |
|
|
| T |
10583197 |
tctacctctcaaattacgatcaattgtgatttttacccaaaaaacagcaccgccggttacggaatggggtctcaaagatctaacagctctttcaagctgg |
10583296 |
T |
|
| Q |
502 |
acaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatga |
601 |
Q |
| |
|
| |||| ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||| |
|
|
| T |
10583297 |
agtattggaaaggatgatgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatctggaatctctctgaaatga |
10583396 |
T |
|
| Q |
602 |
agtcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
10583397 |
agtcctttgatggaaatgggctgcgacacctctc |
10583430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 27 - 477
Target Start/End: Original strand, 10530973 - 10531420
Alignment:
| Q |
27 |
tggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgtgagt |
126 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||| |||| ||| | ||| | ||||||||||||||||||| |||||||| |||| |||| |
|
|
| T |
10530973 |
tggtctacccacttcattgcagtcactttgtattgataattgtgagaagttagcattcatgcctcctgaaacgtggagcagatacacatcgcttgagagt |
10531072 |
T |
|
| Q |
127 |
cttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagtctgg |
226 |
Q |
| |
|
||| ||||||||| || ||| | ||||||||||||| | |||||||||||||||||| |||| || |||| ||| | |||||||||| ||| |
|
|
| T |
10531073 |
cttattttatggagtagctgtgatg---cacttacatccttccaacttgatggtttccctgcactccgaatactttacatttgtttttgtaggagtatgg |
10531169 |
T |
|
| Q |
227 |
attccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtcaagct |
326 |
Q |
| |
|
|||| ||| |||||||||||||||| ||| |||||| || |||||| ||||||| | |||| ||||||||||||||||| ||| || |||||||||| |
|
|
| T |
10531170 |
attcggtttttatttcagaaagtcctccacgtcggtcatcaagcctccgatcacttaaaatcaaatcccatgattcaattggattgcttaaagtcaagct |
10531269 |
T |
|
| Q |
327 |
taagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaatt |
426 |
Q |
| |
|
| |||||||| |||||| ||||||||| |||| |||| | ||| | ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10531270 |
tcggatggacacgctcactgctcttgaacaattgactctagattgtcccgagttgttattttgtgaaggaatttgtctacctcccaaattacaatcaatt |
10531369 |
T |
|
| Q |
427 |
acgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaa |
477 |
Q |
| |
|
||| || | ||||||| ||| || ||||||| ||||||||||||||| |
|
|
| T |
10531370 |
gtgatatctttccaaagagcaacgccgcctgtaacagaatggggtctccaa |
10531420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 22 - 426
Target Start/End: Complemental strand, 13853223 - 13852822
Alignment:
| Q |
22 |
tcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttg |
121 |
Q |
| |
|
||||||||||| || ||| |||||||||||||||| || ||| |||||||||| ||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
13853223 |
tcaagtggtctgccaactccattgcaatcacttgaaatagaaaaatgtgagaatttatcattccttcctcctgaaacatggagcaattacacatcgcttg |
13853124 |
T |
|
| Q |
122 |
tgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggag |
221 |
Q |
| |
|
||||||| |||| |||| || ||| | ||||||||||||| | |||||||||||||||||| ||||||| |||| ||| ||| ||||||| |
|
|
| T |
13853123 |
cgagtcttactttacggagtagctgtgatg---cacttacatccttccaacttgatggtttccctgcactccaaagacttcggataagtgagtgtaggaa |
13853027 |
T |
|
| Q |
222 |
tctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtc |
321 |
Q |
| |
|
||||||||||||| ||||| |||||||||| || ||| |||| || ||| || |||||| |||| ||||||||| ||||||| || | || |||| |
|
|
| T |
13853026 |
tctggattccattaatattttagaaagtcctccaagtcgaccgtcaagactccaaacacttgtaatcaaatcccatgactcaattggatcacttaaagtg |
13852927 |
T |
|
| Q |
322 |
aagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaat |
421 |
Q |
| |
|
|||||| |||||||| ||| || ||||||||| ||||| | | ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13852926 |
aagcttcggatggacacgcttaccgctcttgaacggttggacttggaatgtcgagagttgtcattttgtgaaggagtttgtctacctcctaaattacaat |
13852827 |
T |
|
| Q |
422 |
caatt |
426 |
Q |
| |
|
||||| |
|
|
| T |
13852826 |
caatt |
13852822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 88 - 426
Target Start/End: Original strand, 10679833 - 10680167
Alignment:
| Q |
88 |
cctcctgaaacgtggagcaattacacatcacttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctg |
187 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||||||| ||||||||| || ||| | ||||||||||||| | ||||||||||||||||| |
|
|
| T |
10679833 |
cctcctgaaacgtggagcagatatacatcgcttgtgagtcttattttatggagtagctgtgatg---cacttacatccttccaacttgatggtttccctg |
10679929 |
T |
|
| Q |
188 |
cgctccaaacacttatcatacatgattgtaggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagat |
287 |
Q |
| |
|
| |||| || |||| ||| | |||||||||| ||||||| ||| ||||||||||||||| |||| || |||| |||||| |||||||| | || |
|
|
| T |
10679930 |
cactccgaatactttacatttgtttttgtaggagtatggattcagtttttatttcagaaagtccatcacatcaatcgttaagcctccaatcacttaaaat |
10680029 |
T |
|
| Q |
288 |
cagatcccatgattcaattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattt |
387 |
Q |
| |
|
|| ||| ||||||||||||| | | || ||||||||||| |||||||| |||||| ||||||||| | || |||| | ||| ||||||||| | || |
|
|
| T |
10680030 |
caaatcacatgattcaattggactgcttaaagtcaagcttcggatggacacgctcactgctcttgaacaatagactctagattgtccagagttgtta-tt |
10680128 |
T |
|
| Q |
388 |
tgtgaaggagtttgtctacctcccaaattacaatcaatt |
426 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10680129 |
tgtgaaggagtttgtctacctcccaaattacaatcaatt |
10680167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 10582915 - 10583094
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
10582915 |
ccctcaagtggtctacccacttcattgcaatcacttcatatcgaaaattgtgagaatttatccttcctacctcctgaaacgtggagcaactacacatcac |
10583014 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacactt |
201 |
Q |
| |
|
||||||||||| | || | | || ||| | | ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10583015 |
ttgtgagtctttagttctatcgtagctgtgatt---cacttacatcctttccacttgatggtttccctgcgctccgaacactt |
10583094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 504 - 635
Target Start/End: Original strand, 10192882 - 10193013
Alignment:
| Q |
504 |
aattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaag |
603 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||| |||| ||||||| || | |||||| |
|
|
| T |
10192882 |
aattgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctacccatctcccttgtgtctctgaatattggtgatctctataacatgaag |
10192981 |
T |
|
| Q |
604 |
tcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
10192982 |
tcctttgatggaaatgggcttcaacacctctc |
10193013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 504 - 635
Target Start/End: Original strand, 10085962 - 10086093
Alignment:
| Q |
504 |
aattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaag |
603 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | || ||| | |||||| |||||||||||||||||||| |||| ||||||| || | |||||| |
|
|
| T |
10085962 |
aattgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctaaccatctcccttgtgtctctgaatattggtgatctctataacatgaag |
10086061 |
T |
|
| Q |
604 |
tcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
10086062 |
tcctttgatggaaatgggcttcaacacctctc |
10086093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 189 - 407
Target Start/End: Original strand, 10192652 - 10192864
Alignment:
| Q |
189 |
gctccaaacacttatcatacatgattgtaggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatc |
288 |
Q |
| |
|
||||||||||||| ||||| |||||||||| || |||||||||||| ||||| ||||||||||||| ||||||||| |||||| | |||||| | ||| |
|
|
| T |
10192652 |
gctccaaacacttgacatacgtgattgtaggtgtttggattccatttttattttagaaagtccttcatgtcggtcgtcaagcctccagtcacttaaaatc |
10192751 |
T |
|
| Q |
289 |
agatcccatgattcaattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcatttt |
388 |
Q |
| |
|
| ||||||| | |||||| ||| ||| |||||||||||||| | |||||| ||||||||| || | | | || |||| |||||||||||||| |
|
|
| T |
10192752 |
aaatcccataaagcaattggattgtttaaagtcaagcttaag------acgctcactgctcttgaacagtgggctttgaattgtggagagttgtcatttt |
10192845 |
T |
|
| Q |
389 |
gtgaaggagtttgtctacc |
407 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
10192846 |
gtgaaggagtttgcctacc |
10192864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 189 - 407
Target Start/End: Original strand, 10085732 - 10085944
Alignment:
| Q |
189 |
gctccaaacacttatcatacatgattgtaggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatc |
288 |
Q |
| |
|
||||||||||||| ||||| |||||||||| || |||||||||||| ||||| ||||||||||||| ||||||||| |||||| | ||||| | ||| |
|
|
| T |
10085732 |
gctccaaacacttgacatacgtgattgtaggtgtttggattccatttttattttagaaagtccttcatgtcggtcgtcaagcctccagccacttaaaatc |
10085831 |
T |
|
| Q |
289 |
agatcccatgattcaattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcatttt |
388 |
Q |
| |
|
| ||||||| | |||||| ||| ||| |||||||||||||| | |||||| ||||||||| || | | | | |||| |||||||||||||| |
|
|
| T |
10085832 |
aaatcccataaagcaattggattgtttaaagtcaagcttaag------acgctcactgctcttgaacagtgggctttgacttgtggagagttgtcatttt |
10085925 |
T |
|
| Q |
389 |
gtgaaggagtttgtctacc |
407 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
10085926 |
gtgaaggagtttgcctacc |
10085944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 10531561 - 10531698
Alignment:
| Q |
498 |
attgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaa |
597 |
Q |
| |
|
||||||| ||| || || ||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| | ||||| |||| |
|
|
| T |
10531561 |
attgacagttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaa |
10531660 |
T |
|
| Q |
598 |
atgaagtcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|| ||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
10531661 |
ataaagtcatttgaaggaaatggacttcgacacctctc |
10531698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 635
Target Start/End: Original strand, 10680359 - 10680496
Alignment:
| Q |
498 |
attgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaa |
597 |
Q |
| |
|
||||||| ||| || || ||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| | ||||| |||| |
|
|
| T |
10680359 |
attgacagttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaa |
10680458 |
T |
|
| Q |
598 |
atgaagtcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|| ||||| |||| |||||||| |||||||||||||| |
|
|
| T |
10680459 |
ataaagtcacttgaaggaaatggacttcgacacctctc |
10680496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 10967453 - 10967364
Alignment:
| Q |
34 |
cccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgtg |
123 |
Q |
| |
|
|||||||||||| | ||||||||||||| |||||||||||| | ||| | ||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10967453 |
cccacttcattgaagtcacttgatatttccgactgtaagaatttagcattcttgcctccggaaatgtggagcaattacacatcacttgtg |
10967364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 635
Target Start/End: Complemental strand, 13852699 - 13852595
Alignment:
| Q |
531 |
caccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacac |
630 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| |||||||| |||| |||| |||||||||||| || |||||||||||||||||||| |
|
|
| T |
13852699 |
caccttgatgaaggagctgttgatacccatctcccttttgtctctgtttatcggcagtctctctgaaatgaagtctttcgatggaaatgggcttcgacat |
13852600 |
T |
|
| Q |
631 |
ctctc |
635 |
Q |
| |
|
||||| |
|
|
| T |
13852599 |
ctctc |
13852595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 11244225 - 11244188
Alignment:
| Q |
82 |
ttccttcctcctgaaacgtggagcaattacacatcact |
119 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11244225 |
ttcctacctcctgaaacgtggagcaattacacatcact |
11244188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 632
Target Start/End: Original strand, 13163782 - 13163897
Alignment:
| Q |
517 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
616 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||||||||||||| |
|
|
| T |
13163782 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
13163881 |
T |
|
| Q |
617 |
atgggcttcgacacct |
632 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
13163882 |
atggactccgacacct |
13163897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 13397855 - 13397889
Alignment:
| Q |
90 |
tcctgaaacgtggagcaattacacatcacttgtga |
124 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13397855 |
tcctgaaacatggagcaattacacatcacttgtga |
13397889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 11230137 - 11230092
Alignment:
| Q |
71 |
agaatttatccttccttcctcctgaaacgtggagcaattacacatc |
116 |
Q |
| |
|
|||||||||| || ||||||| ||| |||||||||||||||||||| |
|
|
| T |
11230137 |
agaatttatcgtttcttcctcttgatacgtggagcaattacacatc |
11230092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 599 - 635
Target Start/End: Original strand, 10666347 - 10666383
Alignment:
| Q |
599 |
tgaagtcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10666347 |
tgaagtcctttaatggaaatgggcttctacacctctc |
10666383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 635
Target Start/End: Complemental strand, 55367 - 54754
Alignment:
| Q |
19 |
ccctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcac |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
55367 |
ccctcaagtggactacccacttcattgcaatcacttcatattgaaaaatgtgagaatttatccttcctacctcctgaaacgtggagcaattacacatcac |
55268 |
T |
|
| Q |
119 |
ttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtag |
218 |
Q |
| |
|
|||| |||||| || ||| |||||| | | |||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||| |
|
|
| T |
55267 |
ttgtcagtcttaatatatcatatagttgtgatt---cacttacatcctttccacttgatggtttccctgccctccaaacacttgacataagtagatgtag |
55171 |
T |
|
| Q |
219 |
gagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaa |
318 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||| |
|
|
| T |
55170 |
gagtctggtttccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttataatcgaatcctgttattcaattgaattatttgaa |
55071 |
T |
|
| Q |
319 |
gtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattac |
418 |
Q |
| |
|
||||||||||||||||| |||||| | || ||||||| ||| || | ||||| | |||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
55070 |
gtcaagcttaagatggaaatgctctccgcccttgaaaatttgcatatgaaatgccaaaagttgtcattttctgaaggagtttgtctacctctcaaattac |
54971 |
T |
|
| Q |
419 |
aatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtga |
518 |
Q |
| |
|
|||||||| |||||| || ||| |||| ||| | || ||||||||||||||||||||||||||||| |||| || ||| |||| ||||||||| |
|
|
| T |
54970 |
aatcaattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctccaatatttgacagctcttttttttttgtgtattgtaaagggtga |
54871 |
T |
|
| Q |
519 |
tgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaat |
618 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
54870 |
tgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatctacgtatctgtgatctctctgaaatgaagtcctttgatggaaat |
54771 |
T |
|
| Q |
619 |
gggcttcgacacctctc |
635 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
54770 |
gggctgcgacacctctc |
54754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 635
Target Start/End: Original strand, 26909191 - 26909805
Alignment:
| Q |
18 |
accctcaagtggtctacccacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||| | ||| ||||||||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
26909191 |
accctcaagtggtctacccacttcattgcaatcaattgaaattgaattttgtttgaatttatccttcctacctcttgaaacctggagcaattacacatca |
26909290 |
T |
|
| Q |
118 |
cttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgta |
217 |
Q |
| |
|
||||||| || | |||| || ||| | ||||| ||| ||||| ||||||||||||||||| ||||||| |||| || | ||||||| |
|
|
| T |
26909291 |
cttgtgaacattgagttatatcatagctgtgatg---cacttgaatcatttccgcttgatggtttccctgctctccaaagtcttaaaatttacgattgta |
26909387 |
T |
|
| Q |
218 |
ggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttga |
317 |
Q |
| |
|
||||| |||||||||||| ||||||||||| |||||||| |||| |||| ||||| ||||||||| | |||| ||||||||||||||||||||||||| | |
|
|
| T |
26909388 |
ggagtgtggattccatttatatttcagaaactccttcacatcggccgtcaagccttgaatcacttaaaatcaaatcccatgattcaattgaattatttaa |
26909487 |
T |
|
| Q |
318 |
agtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaatta |
417 |
Q |
| |
|
||| |||||| |||||||| |||||||| ||||||| |||| |||| | ||| ||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
26909488 |
agtgaagcttcggatggacacgctcacagatcttgaacagttgtatctggactgtcgagagttgtcattttgtgaaggtgtttgtctacctcccaactta |
26909587 |
T |
|
| Q |
418 |
caatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtg |
517 |
Q |
| |
|
||||||||| ||| || |||| ||||| ||| ||||| ||||||||| |||||||| || | || | ||||| |||||| || || ||||| |
|
|
| T |
26909588 |
caatcaattgacctttggtctcaaataacaacaccgtctgttacggaatggtgtctccaagatctaaccactctttcagaattgactatcaaagagggtc |
26909687 |
T |
|
| Q |
518 |
atgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaa |
617 |
Q |
| |
|
|||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||| | |||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
26909688 |
atgatacatttaacaccttgatgaaggagttgttgctacccatctcccttgtttctctacaaatcatggatctctatgaaatgaagtcctttgatggaaa |
26909787 |
T |
|
| Q |
618 |
tgggcttcgacacctctc |
635 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
26909788 |
tgggcttcgacgcctctc |
26909805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 167; Significance: 4e-89; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 71 - 635
Target Start/End: Original strand, 11487385 - 11487946
Alignment:
| Q |
71 |
agaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgtgagtcttcatttatggagaagttgtaagtacacacttacatcctttcc |
170 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| || |||||| ||| | |||| || || ||| | |||||||||||||||| |
|
|
| T |
11487385 |
agaatttatcattccttcctcctgaaacgtggagcaattacaagtctcttgtgtcgcttgagttatttagtagctgtgatg---cacttacatcctttcc |
11487481 |
T |
|
| Q |
171 |
acttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagtctggattccatttgtatttcagaaagtccttcacctcggtcgtcgagc |
270 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | || ||||||||||| ||||||||||||||| ||||| ||||||||||||| | ||||||| ||| |
|
|
| T |
11487482 |
acttgatggtttccctgcgctccaaagactaaaactatatgattgtaggtgtctggattccatttttattttagaaagtccttcatgttggtcgtcaagc |
11487581 |
T |
|
| Q |
271 |
ctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaaaggttgaatctaaaat |
370 |
Q |
| |
|
||| ||| ||||| |||| ||||||||| ||||||| || | || ||||||| ||| ||||||||||||||| ||||||||| ||| ||| || | |
|
|
| T |
11487582 |
ctccgatctcttgaaatcaaatcccatgactcaattggatcacttcaagtcaaacttcggatggacatgctcactgctcttgaagttttgtctctgaatt |
11487681 |
T |
|
| Q |
371 |
gtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatgggg |
470 |
Q |
| |
|
|| ||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||| || ||||| ||| || |||| ||||||||||| |
|
|
| T |
11487682 |
gtccagagttgtcattttgtgaagatgtttctctacctcccaaattagaatcaattgagattttgtcggaaagatcaacgccgcctgttacggaatgggg |
11487781 |
T |
|
| Q |
471 |
tctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtg |
570 |
Q |
| |
|
|||| || || |||| || ||||| ||||| |||| | ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
11487782 |
tctcaaagatctgaccgctctttcacggttgactattggagtgggtgatgatatacttaacaccttgatgaagcagtcgttgctacccatctcccttgtg |
11487881 |
T |
|
| Q |
571 |
tctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctc |
635 |
Q |
| |
|
|||||| |||| || || | | |||||||| ||| |||||||| |||||||||| ||||||| |
|
|
| T |
11487882 |
tctctgactatcgattgtcgctacaaaatgaagccctatgatggaagtgggcttcgatacctctc |
11487946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 155 - 422
Target Start/End: Complemental strand, 44955291 - 44955024
Alignment:
| Q |
155 |
cacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagtctggattccatttgtatttcagaaagtccttc |
254 |
Q |
| |
|
|||||| ||| || ||||||||||||||||||| |||||||| ||||| ||| || |||||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
44955291 |
cacttaaatcattcccacttgatggtttccctgtgctccaaagacttaacattagtggttgtaggagtctggattcaattttcattttggaaagtccttc |
44955192 |
T |
|
| Q |
255 |
acctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtcaagcttaagatggacatgctcacagctcttgaa |
354 |
Q |
| |
|
||||||| |||| ||||| ||||||| |||| ||||||||| | ||||||| | || ||||||| ||| |||||| | || || ||||||||| |
|
|
| T |
44955191 |
acctcggccgtcaagcctttgatcacttacaatcacatcccatgactttattgaatcacttaaagtcaatcttcggatggatacacttactgctcttgaa |
44955092 |
T |
|
| Q |
355 |
aggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatc |
422 |
Q |
| |
|
|||| || || || || |||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
44955091 |
gagttgtcacttcaaagtctgaagctgtcattttgtgaaggtgtttgcctacctcccaaattacaatc |
44955024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 551 - 632
Target Start/End: Complemental strand, 44954896 - 44954815
Alignment:
| Q |
551 |
tgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacct |
632 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
44954896 |
tgctacccatctcccttgtgtctctgactatcagttatctggatgaaatgaagtcctttcaaggaaatgggcttcaacacct |
44954815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 36 - 629
Target Start/End: Complemental strand, 17850674 - 17850081
Alignment:
| Q |
36 |
cacttcattgcaatcacttgatatttggtcgtgtaagaatttatccttccttcctcctgaaacgtggagcaattacacatcacttgtgagtcttcattta |
135 |
Q |
| |
|
|||||||||||| |||||| ||||| | ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||| | ||| |
|
|
| T |
17850674 |
cacttcattgcagtcacttcatattagtatgtgtaagaatttatccttcatgcctcctgaaacgtggaacaattacacatcacttgcgagtcttgagtta |
17850575 |
T |
|
| Q |
136 |
tggagaagttgtaagtacacacttacatcctttccacttgatggtttccctgcgctccaaacacttatcatacatgattgtaggagtctggattccattt |
235 |
Q |
| |
|
||||| || || | ||||||| || || || | |||||||| ||||||||| ||| |||| ||| || ||||| || ||| ||||| |||| |
|
|
| T |
17850574 |
tggagcagctg---cgatgcacttacctctttctcattggatggttttcctgcgctcgaaagacttcacatttatagttgtaagaatctagattcaattt |
17850478 |
T |
|
| Q |
236 |
gtatttcagaaagtccttcacctcggtcgtcgagcctcgaatcacttgagatcagatcccatgattcaattgaattatttgaagtcaagcttaagatgga |
335 |
Q |
| |
|
|||||||||||||||||||| || | | || |||| |||||| | |||| ||| ||| | ||||||| || || ||||||||||| ||||| |
|
|
| T |
17850477 |
ttatttcagaaagtccttcacatcagccttcagtcctccggtcacttaaaatcaaatctcattactcaattggatctcttaaagtcaagcttcgaatgga |
17850378 |
T |
|
| Q |
336 |
catgctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttca |
435 |
Q |
| |
|
|| ||||| ||||||||| || |||| |||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||| |
|
|
| T |
17850377 |
cacactcactgctcttgaagaactgtctctaggatgtcgagagttgtcattttgtggaggagtttccctacctcccaagttacaatcaattgatattcat |
17850278 |
T |
|
| Q |
436 |
tcccaaagaacaaaa---ccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaaca |
532 |
Q |
| |
|
|||| |||||||| | || ||||||| ||||||||||||||| | || || ||||| | ||||| ||| ||||| |||||||||||| |||| |
|
|
| T |
17850277 |
tcccgaagaacaacagccccgcctgtaacagaatggggtctccaaggcctaactgctctttcatcattgagtcttggaaaggatgatgatatagtgaaca |
17850178 |
T |
|
| Q |
533 |
ccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgaca |
629 |
Q |
| |
|
|||||||||||||||| ||||| || || ||||| ||||||||| |||| | ||||| || | |||| ||||||||||||||||| |||||||| |
|
|
| T |
17850177 |
ccttgatgaaggagtcgttgctcccaatatccctcgtgtctctgactatctgtcatctctataatctgaactcctttgatggaaatggacttcgaca |
17850081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 632
Target Start/End: Complemental strand, 143206 - 143091
Alignment:
| Q |
517 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
616 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||||||||||||| |
|
|
| T |
143206 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
143107 |
T |
|
| Q |
617 |
atgggcttcgacacct |
632 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
143106 |
atggactccgacacct |
143091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University