View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9223_low_8 (Length: 476)

Name: NF9223_low_8
Description: NF9223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9223_low_8
NF9223_low_8
[»] chr7 (35 HSPs)
chr7 (18-460)||(46472800-46473259)
chr7 (231-461)||(3193015-3193246)
chr7 (231-457)||(15978937-15979163)
chr7 (231-460)||(8564455-8564684)
chr7 (231-460)||(39292613-39292842)
chr7 (231-460)||(28719563-28719790)
chr7 (231-460)||(44306053-44306281)
chr7 (231-460)||(21539067-21539296)
chr7 (231-459)||(21675789-21676016)
chr7 (231-460)||(16382656-16382883)
chr7 (231-394)||(18080618-18080781)
chr7 (231-460)||(17985805-17986035)
chr7 (83-212)||(21676094-21676224)
chr7 (83-212)||(28719355-28719485)
chr7 (83-212)||(39292920-39293049)
chr7 (83-212)||(4483628-4483758)
chr7 (233-341)||(16369389-16369497)
chr7 (83-209)||(45148443-45148570)
chr7 (83-209)||(16382448-16382575)
chr7 (231-445)||(19066598-19066812)
chr7 (138-210)||(8564764-8564836)
chr7 (83-165)||(44306444-44306527)
chr7 (152-212)||(21539375-21539435)
chr7 (75-165)||(39293003-39293094)
chr7 (95-204)||(16369585-16369695)
chr7 (143-211)||(13617694-13617762)
chr7 (83-132)||(44306441-44306490)
chr7 (322-394)||(25123437-25123508)
chr7 (227-271)||(33556819-33556863)
chr7 (227-271)||(36301409-36301453)
chr7 (83-133)||(44306403-44306453)
chr7 (235-439)||(12183053-12183254)
chr7 (227-271)||(38294842-38294886)
chr7 (83-165)||(16382411-16382494)
chr7 (180-212)||(15979241-15979273)
[»] chr1 (10 HSPs)
chr1 (231-460)||(76891-77120)
chr1 (315-460)||(9785056-9785199)
chr1 (231-335)||(20822096-20822200)
chr1 (83-207)||(77184-77309)
chr1 (83-203)||(33396200-33396321)
chr1 (166-216)||(46144669-46144719)
chr1 (227-271)||(34392238-34392282)
chr1 (83-164)||(20821892-20821974)
chr1 (180-216)||(49998565-49998601)
chr1 (83-165)||(20821855-20821938)
[»] chr2 (24 HSPs)
chr2 (231-460)||(22331827-22332056)
chr2 (231-460)||(24840907-24841136)
chr2 (231-460)||(29113315-29113544)
chr2 (231-460)||(43641824-43642053)
chr2 (231-460)||(19434407-19434636)
chr2 (83-212)||(22331619-22331748)
chr2 (333-457)||(7320550-7320674)
chr2 (231-460)||(20272456-20272686)
chr2 (83-209)||(18534727-18534854)
chr2 (231-313)||(45618508-45618590)
chr2 (231-309)||(24561851-24561929)
chr2 (236-442)||(23166837-23167043)
chr2 (236-442)||(23578094-23578300)
chr2 (83-203)||(24562016-24562137)
chr2 (75-170)||(22331574-22331670)
chr2 (135-209)||(6093786-6093860)
chr2 (135-187)||(45618691-45618743)
chr2 (305-394)||(19659015-19659103)
chr2 (172-212)||(43641706-43641746)
chr2 (83-129)||(24840704-24840750)
chr2 (83-133)||(29113144-29113194)
chr2 (85-133)||(20272298-20272346)
chr2 (227-271)||(23799564-23799608)
chr2 (106-169)||(24840690-24840754)
[»] chr6 (24 HSPs)
chr6 (231-460)||(17857363-17857592)
chr6 (231-460)||(23220808-23221038)
chr6 (231-460)||(26505855-26506083)
chr6 (233-445)||(16375373-16375586)
chr6 (233-453)||(4172544-4172764)
chr6 (236-451)||(4228156-4228370)
chr6 (83-209)||(29161586-29161713)
chr6 (83-212)||(16135183-16135313)
chr6 (93-205)||(11374005-11374118)
chr6 (83-205)||(23220601-23220724)
chr6 (238-322)||(18104630-18104714)
chr6 (359-457)||(16135325-16135422)
chr6 (233-443)||(26523169-26523377)
chr6 (75-170)||(22594749-22594845)
chr6 (142-212)||(17084494-17084564)
chr6 (83-140)||(22594743-22594800)
chr6 (104-192)||(25650019-25650108)
chr6 (227-271)||(10445456-10445500)
chr6 (83-165)||(29161667-29161750)
chr6 (93-129)||(17084541-17084577)
chr6 (83-133)||(21930797-21930847)
chr6 (83-133)||(29161737-29161787)
chr6 (83-133)||(29161774-29161824)
chr6 (227-271)||(22594452-22594496)
[»] chr5 (17 HSPs)
chr5 (231-460)||(14342596-14342825)
chr5 (231-460)||(21108617-21108846)
chr5 (231-460)||(24226414-24226644)
chr5 (323-460)||(33150237-33150374)
chr5 (332-443)||(20313661-20313772)
chr5 (83-208)||(20455237-20455363)
chr5 (95-210)||(14342905-14343021)
chr5 (83-209)||(21108409-21108536)
chr5 (245-333)||(20455061-20455149)
chr5 (231-317)||(33627478-33627564)
chr5 (83-212)||(11964850-11964980)
chr5 (143-209)||(20833248-20833314)
chr5 (143-211)||(23414094-23414162)
chr5 (167-212)||(33627641-33627686)
chr5 (305-383)||(20833017-20833094)
chr5 (172-212)||(24226722-24226762)
chr5 (83-133)||(11764779-11764828)
[»] scaffold0231 (3 HSPs)
scaffold0231 (231-460)||(13796-14024)
scaffold0231 (83-203)||(14112-14233)
scaffold0231 (105-165)||(14187-14248)
[»] chr4 (21 HSPs)
chr4 (231-460)||(12134581-12134810)
chr4 (231-459)||(54364402-54364630)
chr4 (231-460)||(17376388-17376618)
chr4 (296-460)||(10238375-10238539)
chr4 (236-460)||(17212800-17213024)
chr4 (83-211)||(5371836-5371964)
chr4 (231-333)||(5371655-5371757)
chr4 (233-460)||(9651344-9651571)
chr4 (104-209)||(12134891-12134997)
chr4 (242-347)||(14570375-14570480)
chr4 (104-212)||(19558253-19558362)
chr4 (346-446)||(19082067-19082167)
chr4 (83-209)||(17376699-17376823)
chr4 (83-203)||(54364717-54364838)
chr4 (83-133)||(19558269-19558319)
chr4 (83-203)||(14570156-14570277)
chr4 (135-222)||(19082309-19082396)
chr4 (143-209)||(49070698-49070764)
chr4 (166-215)||(38763675-38763724)
chr4 (227-271)||(9621748-9621792)
chr4 (143-211)||(24237760-24237828)
[»] chr3 (31 HSPs)
chr3 (231-459)||(17759273-17759500)
chr3 (231-459)||(19060593-19060820)
chr3 (227-459)||(40040057-40040289)
chr3 (227-459)||(37917308-37917540)
chr3 (231-460)||(25104915-25105135)
chr3 (231-460)||(8603729-8603960)
chr3 (293-457)||(15549573-15549737)
chr3 (297-460)||(18738909-18739070)
chr3 (83-212)||(11401475-11401605)
chr3 (324-460)||(17937567-17937701)
chr3 (233-316)||(17392452-17392535)
chr3 (82-209)||(17759582-17759714)
chr3 (82-209)||(19060902-19061034)
chr3 (138-210)||(5229252-5229324)
chr3 (104-203)||(8603542-8603642)
chr3 (306-394)||(13327569-13327656)
chr3 (297-390)||(11883276-11883367)
chr3 (83-127)||(38376997-38377041)
chr3 (83-133)||(11516778-11516828)
chr3 (387-445)||(14970089-14970147)
chr3 (83-133)||(17392279-17392329)
chr3 (166-212)||(25105211-25105257)
chr3 (166-212)||(43428787-43428833)
chr3 (227-271)||(12918084-12918128)
chr3 (227-271)||(45804098-45804142)
chr3 (322-394)||(51962165-51962236)
chr3 (231-270)||(38376831-38376870)
chr3 (83-129)||(5229297-5229343)
chr3 (104-165)||(17759667-17759729)
chr3 (166-216)||(18968989-18969039)
chr3 (104-165)||(19060987-19061049)
[»] scaffold0183 (3 HSPs)
scaffold0183 (233-460)||(9923-10150)
scaffold0183 (83-212)||(9711-9841)
scaffold0183 (83-154)||(9674-9746)
[»] chr8 (43 HSPs)
chr8 (231-460)||(20176814-20177042)
chr8 (231-460)||(20221541-20221769)
chr8 (231-460)||(19332445-19332675)
chr8 (235-458)||(11543625-11543848)
chr8 (235-460)||(22312780-22313004)
chr8 (236-457)||(17501040-17501261)
chr8 (231-460)||(25295077-25295306)
chr8 (231-460)||(45560047-45560276)
chr8 (83-212)||(25756889-25757019)
chr8 (231-460)||(25757097-25757326)
chr8 (323-460)||(34012895-34013032)
chr8 (94-212)||(25294880-25294999)
chr8 (231-445)||(18118892-18119100)
chr8 (231-316)||(3845119-3845204)
chr8 (83-210)||(11543414-11543542)
chr8 (94-216)||(45560350-45560473)
chr8 (83-210)||(22312569-22312697)
chr8 (371-460)||(24907017-24907106)
chr8 (84-212)||(3845282-3845409)
chr8 (83-165)||(20177205-20177288)
chr8 (83-165)||(20221932-20222015)
chr8 (231-345)||(24906904-24907018)
chr8 (83-165)||(19332819-19332902)
chr8 (83-133)||(16000940-16000990)
chr8 (166-216)||(7469147-7469197)
chr8 (83-147)||(19332800-19332865)
chr8 (83-132)||(20177202-20177251)
chr8 (83-132)||(20221929-20221978)
chr8 (90-203)||(25608964-25609067)
chr8 (159-211)||(22498525-22498577)
chr8 (170-209)||(19332756-19332795)
chr8 (83-133)||(20177164-20177214)
chr8 (83-133)||(20221891-20221941)
chr8 (302-342)||(18122570-18122610)
chr8 (83-154)||(24238445-24238517)
chr8 (83-165)||(19332856-19332939)
chr8 (90-125)||(24238489-24238524)
chr8 (96-165)||(16000916-16000986)
chr8 (83-129)||(25294906-25294952)
chr8 (104-165)||(25756873-25756935)
chr8 (83-124)||(19332787-19332828)
chr8 (143-207)||(33171132-33171196)
chr8 (180-216)||(38636912-38636948)
[»] scaffold0090 (9 HSPs)
scaffold0090 (230-460)||(4206-4436)
scaffold0090 (94-212)||(5780-5899)
scaffold0090 (231-313)||(35786-35868)
scaffold0090 (104-212)||(1400-1509)
scaffold0090 (230-282)||(1-53)
scaffold0090 (85-129)||(1447-1491)
scaffold0090 (85-129)||(5827-5871)
scaffold0090 (83-128)||(35993-36038)
scaffold0090 (93-133)||(36025-36064)
[»] scaffold0017 (2 HSPs)
scaffold0017 (231-460)||(11690-11917)
scaffold0017 (96-211)||(11494-11611)
[»] scaffold0079 (4 HSPs)
scaffold0079 (231-460)||(4955-5182)
scaffold0079 (83-210)||(5262-5390)
scaffold0079 (84-154)||(5355-5426)
scaffold0079 (83-169)||(5377-5464)
[»] scaffold1204 (3 HSPs)
scaffold1204 (255-460)||(1072-1277)
scaffold1204 (83-209)||(1362-1489)
scaffold1204 (94-165)||(1443-1515)
[»] scaffold0013 (1 HSPs)
scaffold0013 (231-460)||(8060-8288)
[»] scaffold0452 (1 HSPs)
scaffold0452 (239-460)||(8371-8591)
[»] scaffold0047 (1 HSPs)
scaffold0047 (233-461)||(76083-76311)
[»] scaffold1957 (1 HSPs)
scaffold1957 (231-460)||(746-973)
[»] scaffold0468 (2 HSPs)
scaffold0468 (231-460)||(11940-12169)
scaffold0468 (159-212)||(12229-12282)
[»] scaffold0317 (3 HSPs)
scaffold0317 (231-448)||(14705-14909)
scaffold0317 (83-209)||(14990-15117)
scaffold0317 (106-165)||(15071-15131)
[»] scaffold1278 (1 HSPs)
scaffold1278 (233-443)||(567-777)
[»] scaffold0174 (4 HSPs)
scaffold0174 (333-460)||(20955-21081)
scaffold0174 (83-203)||(21232-21353)
scaffold0174 (231-296)||(21081-21146)
scaffold0174 (83-165)||(21307-21390)
[»] scaffold0032 (1 HSPs)
scaffold0032 (253-379)||(118544-118670)
[»] scaffold0205 (2 HSPs)
scaffold0205 (322-460)||(7152-7290)
scaffold0205 (331-367)||(7118-7154)
[»] scaffold0258 (1 HSPs)
scaffold0258 (233-434)||(9153-9352)
[»] scaffold0005 (2 HSPs)
scaffold0005 (242-347)||(246896-247001)
scaffold0005 (83-203)||(247099-247220)
[»] scaffold0009 (5 HSPs)
scaffold0009 (231-313)||(255373-255456)
scaffold0009 (90-154)||(255634-255699)
scaffold0009 (83-154)||(255597-255669)
scaffold0009 (84-127)||(255551-255594)
scaffold0009 (104-163)||(255551-255611)
[»] scaffold0028 (1 HSPs)
scaffold0028 (233-313)||(39114-39194)
[»] scaffold0601 (1 HSPs)
scaffold0601 (231-271)||(2124-2164)
[»] scaffold0153 (1 HSPs)
scaffold0153 (161-203)||(755-797)
[»] scaffold0049 (1 HSPs)
scaffold0049 (143-211)||(34689-34757)


Alignment Details
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 18 - 460
Target Start/End: Original strand, 46472800 - 46473259
Alignment:
Q  18 gttctgagaccttgattgaacataatctttgatatcaaccccttcaataaaaatttgtcacaaggaacatacatgtattcaccaataatatcacaatcaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||||    
T  46472800 gttctgagaccttgattgaacataatctttgatatcaaccccttcaataaaaatttgtcacaagcaacatatatctattcaccaataatatcataatcaa 46472899  T
Q  118 tcaacatatatgtatttccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaacttca 217  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46472900 tcaacatatatgtattttcaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaacttca 46472999  T
Q  218 tacaacttgtcaaatat-----------------cttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattatttt 300  Q
    ||||| |||||| ||||                 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46473000 tacaatttgtcacatatcttcatatgtcacatatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttgatcttaaagattatttt 46473099  T
Q  301 cgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaactta 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  46473100 cgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaacaaaaatcaagtaaataaactctaaggcctcgactatgtataaactta 46473199  T
Q  401 gatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  46473200 gatcacatatgagtgtagttgaatatacatgtgcgtttcaccagccgactacgacaaaat 46473259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 231 - 461
Target Start/End: Complemental strand, 3193246 - 3193015
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  3193246 atatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttggtcttaaagattattttcgacaaagttcgtctcacattttacaactt 3193147  T
Q  331 taaaa-taattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||    
T  3193146 taaaaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacactaagatcacatatgagtgtagttgaatataca 3193047  T
Q  430 tgtgcgtttcaccggccgactacgacaaaatt 461  Q
    ||||||||||||||||||||||||||||||||    
T  3193046 tgtgcgtttcaccggccgactacgacaaaatt 3193015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 231 - 457
Target Start/End: Complemental strand, 15979163 - 15978937
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||    
T  15979163 atatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttggtcttaacgattatttttgacaaagtttgtctctcattttacaactt 15979064  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||| |||||    
T  15979063 taaaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagatgaatttacat 15978964  T
Q  431 gtgcgtttcaccggccgactacgacaa 457  Q
    ||||||||||||||||| |||||||||    
T  15978963 gtgcgtttcaccggccggctacgacaa 15978937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 8564684 - 8564455
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  8564684 atatcttcatataatcatagcaaactatccacataagattttccaagtatttggacttaaagattatttttgacaaaattcgtctctcatattacaactt 8564585  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  8564584 taaaataattgagacaattgaaccaaaactaagaaaataaactctagggcctcgactatgtataaacttagatcacatatgagtgtagttgaatgtacat 8564485  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||| |||||||||||||||||||||||||    
T  8564484 gtgcatttcaccggccgactacgacaaaat 8564455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 39292842 - 39292613
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39292842 atatcttcatataatcatatcaaactatccacaaacaatttgccaagtatttggtcttaaagattattttcgacaaagttcgtctctcattttacaactt 39292743  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  39292742 taaaataattgagacaaatgaaccaaaaccaagtaaataaattatggggcctcgactatgtatacacttagaccacatatgagtgtagttgaatatacat 39292643  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||| ||||||||||    
T  39292642 gtgcgtttcaccggccgaccacgacaaaat 39292613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 28719563 - 28719790
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  28719563 atatcttcatataatcatatcaaattatccacaaaagattttccaagtatttggtcttaa-gattattttcgacaaagttcatctctcatattacaactt 28719661  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  28719662 taaaataattgagacaaatgaaccaaaaccaagtaaataaactcta-ggcctcgactatgtatacacttagatcacatatgagtgtagttgagtatacat 28719760  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||| ||||||||||    
T  28719761 gtgcgtttcaccggccgaccacgacaaaat 28719790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 44306281 - 44306053
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  44306281 atatcttcatataatcatatcaaactatccacaaaagattttccaagtatttggtcttta-gattattttcgacaaagttcgtctctcatattacaactt 44306183  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||| ||||| |||| ||||||| ||||||||||||||||    
T  44306182 taaaataattgagacaaattaaccaaaaccaagtaaataaactctagggccttgactatatatacacttatatcacatatgagtgtagttgaatatacat 44306083  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
     |||||||||||||||||| ||||||||||    
T  44306082 atgcgtttcaccggccgaccacgacaaaat 44306053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 21539296 - 21539067
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||||||| |||| | |||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21539296 atatcttcatataaacataaccaactatccaccaaagatttgccaagtattaggtcttaaagattattttcaacaaagttcgtctctcattttacaactt 21539197  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  21539196 taaaataattgagacaaatgaaccaaaaccaagtaaataaactctaggacctcgactatgtatagacttagatcacataagagtgtagttgaatatacat 21539097  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||| |||||| ||| ||| ||||||||||    
T  21539096 gtgcatttcactggctgaccacgacaaaat 21539067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 231 - 459
Target Start/End: Complemental strand, 21676016 - 21675789
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||| |||||||| |||||  |||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  21676016 atatattcatatagtcatagaaaactatccacaaaagatttgccaagtatttggtcttaa-gattatttccgacaaagttcgtctctcattttacaactt 21675918  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||| ||||||||||| |||| ||||||||| |||||||||||||||| ||| |||||||||| |||||||||| |||||   ||||||||||| ||||    
T  21675917 taaaacaattgagacaaatgaatcaaaaccaaataaataaactctagggtctctactatgtatacacttagatcacatatgcatgtagttgaatacacat 21675818  T
Q  431 gtgcgtttcaccggccgactacgacaaaa 459  Q
    || ||||||||||||| || |||||||||    
T  21675817 gttcgtttcaccggccaaccacgacaaaa 21675789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 16382656 - 16382883
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcat----attaca 326  Q
    ||||||||||||||||||| | |||||||| |||||||       |||| ||||||||||||||||||||||||||||||| ||||||||    ||||||    
T  16382656 atatcttcatataatcataacgaactatccgcaaaaga-------agtaattggtcttaaagattattttcgacaaagttcatctctcattttaattaca 16382748  T
Q  327 actttaaaataattgagacaattgaacc-aaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaata 425  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||    
T  16382749 actttaaaataattgagacaaatgaacttaaaaacaagtaaataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagttgagta 16382848  T
Q  426 tacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||| ||||||| | ||||||||    
T  16382849 tacatgtgcgtttcactggccgaccatgacaaaat 16382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 231 - 394
Target Start/End: Complemental strand, 18080781 - 18080618
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||| |||||||||| || ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18080781 atatcttcacataatcatataaagctatccacaaaagattttccaagtaattggtcttaaagattattttcgacaaagttcgtctctcaatttacaactt 18080682  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtata 394  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||  ||| ||||||||||||||    
T  18080681 taaaataattgagacaaatgaagcaaaaccaagtaaataaattcaggggtctcgactatgtata 18080618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 17986035 - 17985805
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtctt-aaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  17986035 atatcttcatataattatatcaaactatccacaaaagatttgccatgtatttggtctttaaagattattttcgacaaagttcatctctcattttacaact 17985936  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    ||||||||||||  |||| | || ||| |||||| ||| ||  || |  ||||| |||||||||| || ||||  | ||||||| | ||| || ||||||    
T  17985935 ttaaaataattggaacaaataaatcaagaccaagaaaacaagatccaatgcctcaactatgtatacacctagactacatatgagtgcagtagagtataca 17985836  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||  |||||||||||||    
T  17985835 tgtgcgtttcaccggctaactacgacaaaat 17985805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 21676224 - 21676094
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||||| |||||  |||||||||||||||||||||||  |||||||||||  |||||||||| |||||||||||| ||||||| ||    
T  21676224 aacatatatgcattcaccaacaatattgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaa 21676125  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||||||||||||||    
T  21676124 ctatatcatatagttcaacaactccatacaa 21676094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 28719355 - 28719485
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||| ||    
T  28719355 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 28719454  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    || ||||||||||||||||||||||||||||    
T  28719455 ctctatcatatagttcaacaactccatacaa 28719485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 39293049 - 39292920
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| || |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||| ||    
T  39293049 aacatatatttattcatcaaaaatatcacaatcaatcaacatatatgtatttaccaacaatatcaccatcaattagcatacatgcattaatcaacat-aa 39292951  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    ||| ||||||| |||||||||||||||||||    
T  39292950 ctagatcatatggttcaacaactccatacaa 39292920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 4483628 - 4483758
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatttc-caacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||| |||||| || ||||||||||||||   |||||||||||| |||||| || |||||||||||||||||||| ||    
T  4483628 aacatatatgcattcaccgacaatattacaatccattaacatatatgtattcaacaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 4483727  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||||||||||||||    
T  4483728 ctatatcatatagttcaacaactccatacaa 4483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 16369497 - 16369389
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    |||| |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||| |||| ||| |||||||    
T  16369497 atctacatatagtcatatcaaactatccacaaaagatttgtcaagtatttggtcttaaagattactttcgacaaggttcgtctatcattttaaaacttta 16369398  T
Q  333 aaataattg 341  Q
    || ||||||    
T  16369397 aagtaattg 16369389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 45148443 - 45148570
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||  ||| |||||||  |||||||||| ||||||||| || ||||||| ||    
T  45148443 aacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatgcaatattcaacatcaa 45148542  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
     |||||| ||||||||||||||||||||    
T  45148543 ttatatcttatagttcaacaactccata 45148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 16382448 - 16382575
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| |||||| |||||| ||||||||||||||| ||||||||||||||  ||||||||||||| ||  || || ||||||| | || ||||||| ||    
T  16382448 aacatatatgtatccaccaacaatatcacaatcaataaacatatatgtattcaccaacaatatcacaatatatcaacatatatgtaatattcaacatcaa 16382547  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||||||||||||||||||||||||||||    
T  16382548 ctatatcatatagttcaacaactccata 16382575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 231 - 445
Target Start/End: Original strand, 19066598 - 19066812
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtctt-aaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    |||||| || ||||||||  |||||||| | |||| | ||||| |||||||||||| | ||| |||||||||||||| ||||||||||||| ||||||||    
T  19066598 atatctccacataatcatcacaaactattctcaaaggttttgc-aagtatttggtcctcaaatattattttcgacaaggttcgtctctcattttacaact 19066696  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    ||||||||||||| |||| | || ||| |||||| |||||   || |  ||||| |||||||||| || |||| || |||| || | ||| || ||||||    
T  19066697 ttaaaataattgaaacaagtaaatcaagaccaagcaaatacgatccaatgcctcaactatgtatacacctagaccacatataagtgcagtagagtataca 19066796  T
Q  430 tgtgcgtttcaccggc 445  Q
    ||||||||||||||||    
T  19066797 tgtgcgtttcaccggc 19066812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8564836 - 8564764
Alignment:
Q  138 acaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatac 210  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8564836 acaatatcacaatcaattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatac 8564764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 44306527 - 44306444
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| || |||||||    
T  44306527 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 44306444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 21539435 - 21539375
Alignment:
Q  152 aattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21539435 aattaacatgtatgcattaatcaacatcaactatatcatatagttcaacaactccatacaa 21539375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 39293094 - 39293003
Alignment:
Q  75 tcacaaggaacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||   ||| |||||||| |||||| || |||||||    
T  39293094 tcacaagcaacatatatgtattcaccaataatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatg 39293003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 16369695 - 16369585
Alignment:
Q  95 ttcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatata 193  Q
    |||||||| |||||||| |||||| ||||||||||  ||  |||||||||| |||||||||||| |||||||| || | |||||| |||||  |||||||    
T  16369695 ttcaccaacaatatcaccatcaattaacatatatgccttcaccaacaatataaccatcaattaatatatatgcgttcaccaacatcaactaagtcatata 16369596  T
Q  194 gttcaacaact 204  Q
     ||||||||||    
T  16369595 attcaacaact 16369585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 13617694 - 13617762
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccataca 211  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||| |||||| ||||||||||||||||    
T  13617694 atcaacatcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccataca 13617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 44306490 - 44306441
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtat 132  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  44306490 aacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtat 44306441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 25123437 - 25123508
Alignment:
Q  322 ttacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtata 394  Q
    |||||||||||||| ||| |||||||||||||||||||  |||| |||||||||||| |||| || |||||||    
T  25123437 ttacaactttaaaacaat-gagacaattgaaccaaaactgagtatataaactctaggacctcaaccatgtata 25123508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 33556863 - 33556819
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  33556863 tcaaatatctccatataatcatatcaaattatccacaaaagattt 33556819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 36301453 - 36301409
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  36301453 tcaaatatctccatataatcatatcaaattatccacaaaagattt 36301409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 44306453 - 44306403
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  44306453 aacatatatgtatccaccaataatataacaattaatcaacatatatgtatt 44306403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 439
Target Start/End: Original strand, 12183053 - 12183254
Alignment:
Q  235 cttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaa 334  Q
    ||||||||||||||||||||||   | |||||||||| | |  |||| |   |||||| | ||||| |||| ||||||||| || | || ||||||||||    
T  12183053 cttcatataatcatatcaaactgatctcaaaagatttacaagatattcgacattaaaggtcatttttgacagagttcgtctatcgtttttcaactttaaa 12183152  T
Q  335 ataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgc 434  Q
      ||||| | |||||||| ||||||  || |||  |||| ||  ||||| ||||||||||  ||||||||| |||| || | |||||| |||||||||||    
T  12183153 c-aattgtggcaattgaatcaaaactgagaaaa--aactataatgcctcaactatgtatactcttagatcacatataagtgcagttgagtatacatgtgc 12183249  T
Q  435 gtttc 439  Q
    |||||    
T  12183250 gtttc 12183254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 38294842 - 38294886
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||    
T  38294842 tcaaatatctccatataatcatatcaatttatccacaaaagattt 38294886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 16382411 - 16382494
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtat-ttccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||| ||||||| | ||||||||| ||||| |||||||||||||   ||||||||||||| |||||| || |||||||    
T  16382411 aacatatatgcattcaccgacaatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatg 16382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 15979273 - 15979241
Alignment:
Q  180 aactatatcatatagttcaacaactccatacaa 212  Q
    ||||||||||||||||||||||||| |||||||    
T  15979273 aactatatcatatagttcaacaacttcatacaa 15979241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 77120 - 76891
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  77120 atatcttcatataatcataacaaactatccacaaaagatttgccaagtatttggtcttaaagattattttcgacaaagtttgtctctcatattacaactt 77021  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  77020 taaaataattgagacaattgagccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcacatatgagtgtagttgaatatacat 76921  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||||||||||||||    
T  76920 gtgcgtttcaccggccgactacgacaaaat 76891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 315 - 460
Target Start/End: Complemental strand, 9785199 - 9785056
Alignment:
Q  315 tctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagc 414  Q
    |||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||     
T  9785199 tctcatttcacaactttaaaacaat-gagacaattgaaccaaaaccaagtaaataaactctagg-cctcgactacgtatacacttagatcacatatgagt 9785102  T
Q  415 gtagttgaatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  9785101 gtatttgagtatacatgtgcgtttcaccgaccgaccacgacaaaat 9785056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 20822096 - 20822200
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  20822096 atatcttcatataatcataacaaactatccacaaaatatttgcaaagtatttggtcttaaagattatttccgacaaagttcgtctctcattttacaactt 20822195  T
Q  331 taaaa 335  Q
    |||||    
T  20822196 taaaa 20822200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 77309 - 77184
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||| ||||||  ||||||||||||| |||||| || |||||||||||||||| ||| ||    
T  77309 aacatatatgcattcacccacaatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaccatcaa 77210  T
Q  182 ctatatcatatagttcaacaactcca 207  Q
    ||||||||||||||| ||||||||||    
T  77209 ctatatcatatagtttaacaactcca 77184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 33396200 - 33396321
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||| ||||||||||||||||  || ||||||||   ||||||||| |||||||||  | ||||||| ||    
T  33396200 aacatatatgcattcaccgacaatatcacaatcattcaacatatatgtattcaccgacaatatcctaatcaattaacatatatgcaacattcaacatcaa 33396299  T
Q  182 ctatatcatatagttcaacaac 203  Q
    ||||||||||||||||||||||    
T  33396300 ctatatcatatagttcaacaac 33396321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 46144669 - 46144719
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaacttc 216  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||    
T  46144669 cattaatccacttcaactatatcatatagttcaacaactccatacaacttc 46144719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 34392238 - 34392282
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  34392238 tcaaatatctccatataatcatatcaaattatccacaaaagattt 34392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 20821892 - 20821974
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgta-tttccaacaatatcaccatcaattaaaatatat 164  Q
    |||||| ||||||||||||| | ||||| |||||||||||||||||||| |  ||||| ||||||| |||||| || ||||||    
T  20821892 aacatatatgtattcaccaacattatcataatcaatcaacatatatgtactcaccaaccatatcacaatcaatcaacatatat 20821974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 49998601 - 49998565
Alignment:
Q  180 aactatatcatatagttcaacaactccatacaacttc 216  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49998601 aactatatcatatagttcaacaactacatacaacttc 49998565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 20821855 - 20821938
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  |||||| |||||  |||||| || |||||||    
T  20821855 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatg 20821938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 22331827 - 22332056
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22331827 atatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttggtcttaaagattatttttgacaaagttcgtctctcatattacaactt 22331926  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  22331927 taacataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcacatatgagtgtagtggaatatacat 22332026  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||| |||||| |||||||||||||||||||    
T  22332027 gtgtgtttcatcggccgactacgacaaaat 22332056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 24840907 - 24841136
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||| |||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  24840907 atatattcatataataatagaaaactatccacaaaagatttgccaagtatttggtcttaaagattattttcgacaaagttcgtttctcattttagaactt 24841006  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||  |||||| ||||||||||||||||    
T  24841007 taaaataattgagacaattgaaccaaaaccaattaaataaactctagggcctcgactatttatacacttagatcacgtatgagtgtagttgaatatacat 24841106  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||||||||||||||    
T  24841107 gtgcgtttcaccggccgactacgacaaaat 24841136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 29113315 - 29113544
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  29113315 atatcttcatataatcataacaaactattcacaaaagatttgccaagtaattggtcttaaagattattttcgacaaggtttgtctctcattttacaactt 29113414  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29113415 taaaatagttgagacaaatgaaccaaaaccaagtaaataaactcttggggctcaactatgtataaacttagatcacatatgagtgtagttgaatatacat 29113514  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||| |||||||||||||||||||    
T  29113515 gtgcgtttcaacggccgactacgacaaaat 29113544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 43641824 - 43642053
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||     
T  43641824 atatcttcatataatcatatcaaactatctacaatagatttgccaagtatttggtcttaaagattattttcgacaaagttcgtctctcattctacaactc 43641923  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||  | |||||||| ||||||| ||||||||||||||||    
T  43641924 taaaataattgagacaaatgaacaaaaaccaagtatataaactctagggcctcgactatgtatccaattagatcacatatgagtgtagttgaatatacat 43642023  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||| ||||||||||    
T  43642024 gtgcgtttcaccggccgaccacgacaaaat 43642053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 19434636 - 19434407
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||     
T  19434636 atatcttcatataatcatatcaaactatctacaatagatttgccaattatttggtcttaaagattattttcgacaaagttcgtctctcattctacaactc 19434537  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  19434536 taaaataattgagacaaatgaaccaaaaccaagtatataaactctagggcctcgactatgcatacacttagatcacatatgagtgtagttgaatatacat 19434437  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||| |||||| ||||||| ||||||||||    
T  19434436 gtgcatttcactggccgaccacgacaaaat 19434407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 22331619 - 22331748
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatttccaacaatatcaccatcaattaaaatatatgcattaatcaacataaac 182  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22331619 aacatatatgtattcaccaacaatattacaatcaatcaacatatatgtattaccaacaatatcaccatcaattaatatatatgcattaatcaacataaac 22331718  T
Q  183 tatatcatatagttcaacaactccatacaa 212  Q
    ||||||||||||||||||||||||||||||    
T  22331719 tatatcatatagttcaacaactccatacaa 22331748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 333 - 457
Target Start/End: Original strand, 7320550 - 7320674
Alignment:
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  7320550 aaataattgagacaaatgaaccaaaaccaagtatataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatatacatgt 7320649  T
Q  433 gcgtttcaccggccgactacgacaa 457  Q
    |||||||||||||||||||||||||    
T  7320650 gcgtttcaccggccgactacgacaa 7320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 20272456 - 20272686
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||  || ||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  20272456 atatcttcatataatcataacaaactatccacaagagatttgtcaattatttagtcttaaagattattttcgacaaagttcgtctcttattttacaactt 20272555  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    |||||||||||| |||||| || ||||||||| |||| ||  || |  ||||| |||||||||| || |||| |  ||||||| | |||||| |||||||    
T  20272556 taaaataattgaaacaattaaatcaaaaccaaataaaaaagttccaatgcctcaactatgtatacacctagacctcatatgagtgaagttgagtatacat 20272655  T
Q  431 gtgcgtttcacc-ggccgactacgacaaaat 460  Q
    || ||||||||| |||  |||||||||||||    
T  20272656 gtacgtttcaccgggctaactacgacaaaat 20272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 18534727 - 18534854
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatttc-caacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||   ||| |||||||| |||||| || |||||||||||||||||||| ||    
T  18534727 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatgcattaatcaacatcaa 18534826  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||||||||||||||||||||||||||||    
T  18534827 ctatatcatatagttcaacaactccata 18534854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 45618508 - 45618590
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgt 313  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  45618508 atatcttcatataatcatatcaaattatccacaaaagatttaccaagtaattggtcttaaagattattttcgacaaagttcgt 45618590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 24561929 - 24561851
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagt 309  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  24561929 atatcttcatataatcatatcaaacaatctacaaaagattttctaagtatttggtcctaaagattattttcgacaaagt 24561851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 442
Target Start/End: Complemental strand, 23167043 - 23166837
Alignment:
Q  236 ttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaa 335  Q
    ||||||||||||||||||||| | |||||||| || || | ||||| || ||||||||| |||||  ||||||||||||| || | | || |||||||||    
T  23167043 ttcatataatcatatcaaactgttcacaaaaggttcgcaaggtattcggccttaaagatcatttttaacaaagttcgtctatcgtttcacgactttaaaa 23166944  T
Q  336 taattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcg 435  Q
     ||  |   |||||||| |||||| ||| ||| ||| ||||  ||||| |||||| |||  ||||||||| |||| |||| |||||| ||||||||||||    
T  23166943 caacggtcgcaattgaatcaaaactaagcaaacaaattctaatgcctcaactatgcatactcttagatcacatatcagcgaagttgagtatacatgtgcg 23166844  T
Q  436 tttcacc 442  Q
    |||||||    
T  23166843 tttcacc 23166837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 442
Target Start/End: Complemental strand, 23578300 - 23578094
Alignment:
Q  236 ttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaa 335  Q
    ||||||||||||||||||||| | |||||||| || || | ||||| || ||||||||| |||||  ||||||||||||| || | | || |||||||||    
T  23578300 ttcatataatcatatcaaactgttcacaaaaggttcgcaaggtattcggccttaaagatcatttttaacaaagttcgtctatcgtttcacgactttaaaa 23578201  T
Q  336 taattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcg 435  Q
     ||  |   |||||||| |||||| ||| ||| ||| ||||  ||||| |||||| |||  ||||||||| |||| |||| |||||| ||||||||||||    
T  23578200 caacggtcgcaattgaatcaaaactaagcaaacaaattctaatgcctcaactatgcatactcttagatcacatatcagcgaagttgagtatacatgtgcg 23578101  T
Q  436 tttcacc 442  Q
    |||||||    
T  23578100 tttcacc 23578094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 24562137 - 24562016
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||| ||||||| ||||||||||||||  ||||||||||||| |||||| || ||||||||||||||||||||  |    
T  24562137 aacatatatgcattcaccgacaatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcga 24562038  T
Q  182 ctatatcatatagttcaacaac 203  Q
    || ||||||||| |||||||||    
T  24562037 ctttatcatataattcaacaac 24562016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 22331574 - 22331670
Alignment:
Q  75 tcacaaggaacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcatta 170  Q
    ||||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| || |||||| || ||||||| ||||    
T  22331574 tcacaagcaacacatatgtattcatcaataatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatgtatta 22331670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 6093786 - 6093860
Alignment:
Q  135 ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccata 209  Q
    |||||||||||  |||||||||| ||||||||| || ||||||  ||||||||||||||||||||||||||||||    
T  6093786 ccaacaatatcctcatcaattaacatatatgcaatattcaacaataactatatcatatagttcaacaactccata 6093860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 45618743 - 45618691
Alignment:
Q  135 ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatat 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45618743 ccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactatat 45618691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 19659015 - 19659103
Alignment:
Q  305 aaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtata 394  Q
    ||||| |||||||| | ||| |||||||||| ||| ||||||||||||||||||| ||||| ||||||  |||| |||| || |||||||    
T  19659015 aaagtccgtctctccttttataactttaaaacaat-gagacaattgaaccaaaactaagtatataaaccttaggacctcaaccatgtata 19659103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 43641706 - 43641746
Alignment:
Q  172 tcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  43641706 tcaacatcaactacatcatatagttcaacaactccatacaa 43641746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 24840704 - 24840750
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||||| |||| |||||||| |||||| |||||||||||||||||||    
T  24840704 aacatatatgttttcaccaacaatatctcaatcaatcaacatatatg 24840750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 29113144 - 29113194
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||    
T  29113144 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtatt 29113194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 20272298 - 20272346
Alignment:
Q  85 catacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||| ||| ||||||| | ||||||||||||||| ||||||||||||||    
T  20272298 catatatgcattcaccgacaatatcacaatcaattaacatatatgtatt 20272346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 23799564 - 23799608
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||  ||||||||||||||||| ||||||||||| ||||    
T  23799564 tcaaatatccccatataatcatatcaaattatccacaaaatattt 23799608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 24840690 - 24840754
Alignment:
Q  106 tatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcatt 169  Q
    ||||||||||||| ||||||||||| ||  ||||||||||| | |||||| || |||||||||||    
T  24840690 tatcacaatcaattaacatatatgttttcaccaacaatatctcaatcaatcaacatatatgcatt 24840754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 17857592 - 17857363
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17857592 atatcttcatataatcatatcaaactatccaaaaaagatttgccaagtatttggtcttaaagattattttcgacaaagttcgtctctcattttacaactt 17857493  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||    
T  17857492 taaaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagatcacatatgagtgtggttgaatatacat 17857393  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||  ||||||| ||||||||||||||||||    
T  17857392 gtcagtttcactggccgactacgacaaaat 17857363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 23220808 - 23221038
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaa-gatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    ||||||||||||||| |||||||| |||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23220808 atatcttcatataataatatcaaattatccagaaaaagatttggcaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 23220907  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  23220908 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggtctcgactatgtataaaattagatcacatatgagtgtagttgaatataca 23221007  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||| |||||||||||| |||||||||||||    
T  23221008 tgtgtgtttcaccggccaactacgacaaaat 23221038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 26505855 - 26506083
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26505855 atatcttcatttaatcatatcaaactatccacaaaagatttgccaagtaattggtcttaaagattattttcgacaaagttcgtctctcattttacaactt 26505954  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||||||| |||||    
T  26505955 taatataattgagacaa-tgagccaaaaccaagtaaataaactctagggcctcgacaatgtatatacttagatcacatatgagtgtagttgaatgtacat 26506053  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||| |||||||||||||    
T  26506054 gtgcgtttcaccggccaactacgacaaaat 26506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 233 - 445
Target Start/End: Original strand, 16375373 - 16375586
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    |||||||||||||||||||||||||||| ||||| ||||   ||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  16375373 atcttcatataatcatatcaaactatccccaaaatatttttcaagtattaggtcttaaagattattttcgacaaagttcgtctatcatttaacaacttta 16375472  T
Q  333 aaataattgagacaattgaacc-aaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatg 431  Q
    ||||||||||  |||||||||| ||||||||| ||| ||| ||||  ||||| ||| || ||| |||||||||| |||| || | |||||| ||| |||     
T  16375473 aaataattgaagcaattgaaccaaaaaccaagcaaagaaattctaatgcctcaactttgcatacacttagatcacatataagtggagttgagtatgcatc 16375572  T
Q  432 tgcgtttcaccggc 445  Q
    | ||||||||||||    
T  16375573 tacgtttcaccggc 16375586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 233 - 453
Target Start/End: Complemental strand, 4172764 - 4172544
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    |||||||||||||||| ||||||||| |||||||||||||| |  ||||   |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  4172764 atcttcatataatcatgtcaaactattcacaaaagatttgcaagatattcaatcttaaagatcattttcgacaaagttcgtctatcattttacaacttta 4172665  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    | | ||||||||||||||||||||||| || ||||  || || || ||||| ||| ||||||  |||||||||  |||||| |||||| | |||||||||    
T  4172664 acacaattgagacaattgaaccaaaactaaataaaccaagtcaagtgcctcaactttgtatactcttagatcacttatgagtgtagttaagtatacatgt 4172565  T
Q  433 gcgtttcaccggccgactacg 453  Q
    |||| ||||| ||| ||||||    
T  4172564 gcgtatcaccagccaactacg 4172544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 236 - 451
Target Start/End: Complemental strand, 4228370 - 4228156
Alignment:
Q  236 ttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaa 335  Q
    ||||||||||||| ||||||||| |||||||||||||| |  |||| |||||||||||| |||||||||||||||||||| |||| |||||||||||| |    
T  4228370 ttcatataatcatgtcaaactattcacaaaagatttgcaagatattcggtcttaaagatcattttcgacaaagttcgtctatcattttacaactttaaca 4228271  T
Q  336 taattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcg 435  Q
     ||||||||||||||||||||||| || ||||  || |  || ||||| ||| ||||| | |||||||||  |||||| |||||| | ||||||||||||    
T  4228270 caattgagacaattgaaccaaaactaaataaaccaagttaagtgcctcaactttgtat-atcttagatcacttatgagtgtagttaagtatacatgtgcg 4228172  T
Q  436 tttcaccggccgacta 451  Q
    | ||||||||| ||||    
T  4228171 tatcaccggccaacta 4228156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 29161713 - 29161586
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||| || ||||||| ||    
T  29161713 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatgcaatattcaacatcaa 29161614  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    |||||||||||||||| |||||||||||    
T  29161613 ctatatcatatagttcgacaactccata 29161586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 16135183 - 16135313
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  |||||||||||||  ||||| || |||||||||||||||||||| ||    
T  16135183 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacagtcaatcaacatatatgcattaatcaacatcaa 16135282  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||| ||||||||||||    
T  16135283 ctatatcatatagttcaataactccatacaa 16135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 11374118 - 11374005
Alignment:
Q  93 tattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcata 191  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||||||||||  |||||||||| ||||||||| || ||||||| ||||||||||||    
T  11374118 tattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcaatattcaacatcaactatatcata 11374019  T
Q  192 tagttcaacaactc 205  Q
    ||||||||||||||    
T  11374018 tagttcaacaactc 11374005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 23220601 - 23220724
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||| ||||||| ||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||| ||    
T  23220601 aacatatatgcattcaccgacaatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 23220700  T
Q  182 ctatatcatatagttcaacaactc 205  Q
    ||||||||||||||||||||||||    
T  23220701 ctatatcatatagttcaacaactc 23220724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 18104714 - 18104630
Alignment:
Q  238 catataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatat 322  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18104714 catataatcatatcaaactatccacgaaagatttgccaagtatttgatcttaaagattattttcgacaaagttcgcctctcatat 18104630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 359 - 457
Target Start/End: Original strand, 16135325 - 16135422
Alignment:
Q  359 ccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaa 457  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||   ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  16135325 ccaagtaaataaactctagg-cctcgactatgtatacacttagatcatccatgagtgtagttgaatatacatgtgcgtttcaccggccaactacgacaa 16135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 443
Target Start/End: Complemental strand, 26523377 - 26523169
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||||| | |||||||||||| ||||  ||||| |||||| | || | | ||||||||     
T  26523377 atcttcgtataatcatatcaagctatacacaaaagatttgaaaagtactcggtcttaaagatcatttctgacaa-gttcgtatgtcgtttcacaactttg 26523279  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||  |||||||||||||||| | |||| ||  ||||||| ||||  ||||| |||||||||| |||||||||| ||||||| | |||||| |||||||||    
T  26523278 aag-aattgagacaattgaatccaaactaaccaaataaattctactgcctcaactatgtatacacttagatcacatatgagtgcagttgagtatacatgt 26523180  T
Q  433 gcgtttcaccg 443  Q
    || ||||||||    
T  26523179 gcttttcaccg 26523169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 22594845 - 22594749
Alignment:
Q  75 tcacaaggaacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcatta 170  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| || ||||||| ||||    
T  22594845 tcacaagcaacatatatgtattcaccaataatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatta 22594749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 17084564 - 17084494
Alignment:
Q  142 tatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17084564 tatcacaatcaatcaacatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaa 17084494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22594800 - 22594743
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatttccaaca 140  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  22594800 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattaccaaca 22594743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 25650019 - 25650108
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatat 192  Q
    |||||| |||||||||||||||||||||||  |||||||||||  |||||||||| ||||||||| || ||||||| ||||| |||||||    
T  25650019 aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcactattcaacatcaactacatcatat 25650108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 10445456 - 10445500
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  10445456 tcaaatatctccatataatcatatcaaattatccacaaaagattt 10445500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 29161750 - 29161667
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| || |||||||| | |||||| ||||| |||||||||||||||||  ||||||||||||| |||||| || |||||||    
T  29161750 aacatatatatattcaccgacaatatctcaatccatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 29161667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 17084577 - 17084541
Alignment:
Q  93 tattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17084577 tattcaccaatagtatcacaatcaatcaacatatatg 17084541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 21930797 - 21930847
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||    
T  21930797 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtatt 21930847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 29161787 - 29161737
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| | |||||||| |||||||||||||| ||||    
T  29161787 aacatatatgtattcaccaacagtatcacaaccaatcaacatatatatatt 29161737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 29161824 - 29161774
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||| ||||||| | |||||| |||||||||||||||||||||||    
T  29161824 aacatatatgcattcaccgacaatatcccaatcaatcaacatatatgtatt 29161774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 22594496 - 22594452
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||||||||||||||||| || |||| || |||||||||    
T  22594496 tcaaatatcttcatataatcatataaatctattcataaaagattt 22594452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 3e-98; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 14342825 - 14342596
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||| |||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14342825 atatcttcatttaatcacatcaaactatccacacaagatttgccaaatatttggtcttaaagattattttcgacaaagttcgtatctcatattacaactt 14342726  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||| ||| ||||||||||||    
T  14342725 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatggatacacttatatcacatatgagtgtaattgaatatacat 14342626  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||||||||||||||    
T  14342625 gtgcgtttcaccggccgactacgacaaaat 14342596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 21108617 - 21108846
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21108617 atatcttcatataatcataacgaactatccgcaaaagatttgacaagtatttggtcttaaagattattttcgacaaagttcgtctctcattttacaactt 21108716  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  21108717 taaaacaattgagacaaatgaaccaataccaagtaaataaactctagggcttcgactatgtatacacttagatcacatatgagtgtagttgaatatacat 21108816  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||| ||||||||||||||| ||||||||||    
T  21108817 gtgtgtttcaccggccgaccacgacaaaat 21108846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 24226644 - 24226414
Alignment:
Q  231 atatcttcatataatcatatcaaacta-tccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    ||||||||||||||||||||||||||| || | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  24226644 atatcttcatataatcatatcaaactaatctataatagatttgccaagtatttggtcttaaagattattttcgacaaagttcgtctctcattctacaact 24226545  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  24226544 ctaaaataattgagacaaatgaaccaaaaccaagtatataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatataca 24226445  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
     ||||||||||||||||||| ||||||||||    
T  24226444 cgtgcgtttcaccggccgaccacgacaaaat 24226414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 33150374 - 33150237
Alignment:
Q  323 tacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttga 422  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||| ||||||| ||||||||    
T  33150374 tacaactctaaaataattgagacaaatgaaccaaaaccaagtatataaactttagggcctcgactatgtatacacttaaatcacatatgagtgtagttga 33150275  T
Q  423 atatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||||| |||||||||||||||    
T  33150274 atatacatgtgcgtttcaccggacgactacgacaaaat 33150237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 20313661 - 20313772
Alignment:
Q  332 aaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatg 431  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||    
T  20313661 aaaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtaaacacttagatcagatatgagtgtagttgaacatacatg 20313760  T
Q  432 tgcgtttcaccg 443  Q
    |||| |||||||    
T  20313761 tgcgcttcaccg 20313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 20455363 - 20455237
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||| ||    
T  20455363 aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 20455264  T
Q  182 ctatatcatatagttcaacaactccat 208  Q
    |||||||||||||||||||||||||||    
T  20455263 ctatatcatatagttcaacaactccat 20455237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 14343021 - 14342905
Alignment:
Q  95 ttcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatata 193  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||     
T  14343021 ttcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatt 14342922  T
Q  194 gttcaacaactccatac 210  Q
    |||||||||||||||||    
T  14342921 gttcaacaactccatac 14342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 21108409 - 21108536
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||||||||||  ||||||||||||| |||||| || ||||||| | || ||||||| ||    
T  21108409 aacatatatgtattcaccgacaatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtaatattcaacatcaa 21108508  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||||||||||||||||||||||||||||    
T  21108509 ctatatcatatagttcaacaactccata 21108536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 20455149 - 20455061
Alignment:
Q  245 tcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaa 333  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||| || ||||||||||||    
T  20455149 tcatatcaaactatccacaaaagatttgccaagtatttgctcttaaagattattttcgacaaaatttgtctcttattttacaactttaa 20455061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 33627564 - 33627478
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctct 317  Q
    |||||| |||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  33627564 atatctccatataatcataacaaattatccacaaaaaatttgctaagtatttgatcttaaagattattttcgacaaagttcatctct 33627478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 11964850 - 11964980
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| |  |||||||||||||| ||||||||||||||  || ||||||||||  ||||| || |||||||||||||||||||| ||    
T  11964850 aacatatatgcattcaccgacgatatcacaatcaattaacatatatgtattcaccgacaatatcacactcaatcaacatatatgcattaatcaacatcaa 11964949  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||| || ||||||||||||| |||||||    
T  11964950 ctatattatttagttcaacaacttcatacaa 11964980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 20833314 - 20833248
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccata 209  Q
    |||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20833314 atcaccatcacttaacatatatgcattattcaacatcaactatatcatatagttcaacaactccata 20833248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 23414094 - 23414162
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccataca 211  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||| |||||| ||||||||||||||||    
T  23414094 atcaacatcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccataca 23414162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 33627686 - 33627641
Alignment:
Q  167 attaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  33627686 attaatcaacttcaactatatcatatagttcaacaactccatacaa 33627641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 20833094 - 20833017
Alignment:
Q  305 aaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctc 383  Q
    ||||| ||||| || | |||||||||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| ||||    
T  20833094 aaagtccgtctttccttttacaactttaaaacaat-gagacaattgaaccaaaactaagtatataaaccctaggacctc 20833017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 24226762 - 24226722
Alignment:
Q  172 tcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  24226762 tcaacatcaactacatcatatagttcaacaactccatacaa 24226722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 11764828 - 11764779
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  11764828 aacatatatgtattcaccaacaatatcacaatc-atcaatatatatgtatt 11764779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 178; Significance: 8e-96; HSPs: 3)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 14024 - 13796
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14024 atatcttcatataatcataacaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagctcgtctctcattttacaactt 13925  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  13924 taaaataattgagacaaatgaaccaaaaccaagtaaat-aactctagggcctcgactatgtatacactttgatcacatatgagtgtagttgaatatacat 13826  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||| |||||||||||||| |||| |||||    
T  13825 gtgcatttcaccggccgaccacgaaaaaat 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 14233 - 14112
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||  ||||| ||||||| |||||| || ||||||| ||| | |||||| ||    
T  14233 aacatatatgtattcaccaacaatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgtattcaccaacatcaa 14134  T
Q  182 ctatatcatatagttcaacaac 203  Q
    |||||||||||| |||||||||    
T  14133 ctatatcatataattcaacaac 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 14248 - 14187
Alignment:
Q  105 atatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||||||||||| ||||||||||||||  ||||||||||||| ||| || || |||||||    
T  14248 atatcacaatcaattaacatatatgtattcaccaacaatatcacaatcgatcaacatatatg 14187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 8e-96; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 12134810 - 12134581
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  12134810 atatcttcatataatcataacaaactatacacaaaagatttgccaagtatttggtgttaaagattattttcgacaaagttcgtctctcaaattacaactt 12134711  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||  |||||||||||||||    
T  12134710 taaaataattgagacaattgaaccaaaatcaagtaaataaactctaggacctcaactatgtataagcttagatcacatatgagtatagttgaatatacat 12134611  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||| |||||||||||||||||||||||    
T  12134610 gtgcgtatcaccggccgactacgacaaaat 12134581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 231 - 459
Target Start/End: Complemental strand, 54364630 - 54364402
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||| |||||||||||||||||||| ||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||    
T  54364630 atatcttcgtataatcatatcaaactatctacaaaagattttccaagtatttgggcctaaagattattttcgacaaagttcgtctctcattttacaactt 54364531  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || |||||||||| ||||||| ||||||||||||||||    
T  54364530 taaaataattgagacaaatgaaccaaaaccaagtaaataaattctagggcctcgactatgcgtatacttagatcacatatgagtgtagttgaatatacat 54364431  T
Q  431 gtgcgtttcaccggccgactacgacaaaa 459  Q
    |||||||||||| ||||||| ||||||||    
T  54364430 gtgcgtttcaccagccgacttcgacaaaa 54364402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 17376618 - 17376388
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||| ||||| || | |||||||    
T  17376618 atatcttcatacaatcatatcaaactatccacaaaagattttccaagtatttggtcttaaagattcttttcaacaaagttcatctcttatttcacaactt 17376519  T
Q  331 taaaataattgagacaattgaaccaaaaccaagt-aaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    ||||||||| || ||||||| |||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||  |||||| |||| ||||||||||    
T  17376518 taaaataatggaaacaattggaccaaagccaagtaaaataaactctagggtctcgactatgtatacacttagatcacttatgagtgtagatgaatataca 17376419  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    | |||||||||||||||||||||||||||||    
T  17376418 tttgcgtttcaccggccgactacgacaaaat 17376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 296 - 460
Target Start/End: Complemental strand, 10238539 - 10238375
Alignment:
Q  296 attttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataa 395  Q
    ||||| ||||||||||  ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||     
T  10238539 atttttgacaaagttcaactctcattttacaactttaaaataattgagacaaatgaactaacaccaagtaaataaactctagggcctcgactatgtatac 10238440  T
Q  396 acttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  10238439 acttagatcacatatgagtgtagttgaatatacatgtgcgtttcaccggcctactacgacaaaat 10238375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 236 - 460
Target Start/End: Complemental strand, 17213024 - 17212800
Alignment:
Q  236 ttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||  || |||||| |||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  17213024 ttcatataatcatatcaaactatccacaaaagatttgtcaaatatttgatcttaaagattatttttgacaaagtttgtctatcattttacaactttaaaa 17212925  T
Q  336 taattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcg 435  Q
    |||||||  |||||||| ||||||||| |||| ||| || |  ||||| |||||| ||| |||||||||  |||| || | | |||| ||| ||||| ||    
T  17212924 taattgaagcaattgaaacaaaaccaattaaacaaattccaatgcctcaactatgcatacacttagatcgcatataagtgcacttgagtatgcatgtacg 17212825  T
Q  436 tttcaccggccgactacgacaaaat 460  Q
    ||||||||||  | |||||||||||    
T  17212824 tttcaccggctaaatacgacaaaat 17212800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 5371964 - 5371836
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||| ||    
T  5371964 aacatatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaa 5371865  T
Q  182 ctatatcatatagttcaacaactccataca 211  Q
    ||||||||||||| ||||||||||||||||    
T  5371864 ctatatcatatag-tcaacaactccataca 5371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 5371757 - 5371655
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||  |||||| || |||||||||    
T  5371757 atatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttactcttaaagattattttcgacaaagtatgtctcttattttacaactt 5371658  T
Q  331 taa 333  Q
    |||    
T  5371657 taa 5371655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 460
Target Start/End: Original strand, 9651344 - 9651571
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    ||||||||| |||||||||||||||| |||||| | ||||| || ||||  || | |||||| |||||||||||||||||||| || | | ||||||| |    
T  9651344 atcttcatacaatcatatcaaactattcacaaatggtttgcaaaatattcagtttcaaagatcattttcgacaaagttcgtctatcgtttcacaacttaa 9651443  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||  ||||  || ||||||| |||||| ||| ||| ||| ||||  | ||  |||||||||| |||||||||| |||| || | |||||| |||| ||||    
T  9651444 aatcaattatgaaaattgaatcaaaactaagcaaacaaattctaatgtcttaactatgtatacacttagatcacatataagtgcagttgagtatagatgt 9651543  T
Q  433 gcgtttcaccggccgactacgacaaaat 460  Q
    ||| |||||||||| | |||||| ||||    
T  9651544 gcgcttcaccggccaaatacgacgaaat 9651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 12134997 - 12134891
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaa 202  Q
    ||||||| || |||||||||||||||||||  |||| ||||||  |||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||    
T  12134997 aatatcataaccaatcaacatatatgtattcaccaataatatcttcatcaattaacatagatgcattattcaacatcaactatatcatatagttcaacaa 12134898  T
Q  203 ctccata 209  Q
    |||||||    
T  12134897 ctccata 12134891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 14570375 - 14570480
Alignment:
Q  242 taatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataattg 341  Q
    |||||| || || |||| |||||||||||||  |||||| | ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  14570375 taatcacataaagctattcacaaaagatttgtcaagtatcttgtcttaaagattattttcgacaaggttcgtctatcattttacaactttaaaataattg 14570474  T
Q  342 agacaa 347  Q
    | ||||    
T  14570475 aaacaa 14570480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 19558253 - 19558362
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaa 202  Q
    ||||| |||||| || ||||||||||||||  ||||||||||||| |||||| || | ||||| |||||||||||| ||||||||||||| |||||||||    
T  19558253 aatataacaatccattaacatatatgtattcaccaacaatatcacaatcaatcaacagatatgtattaatcaacatcaactatatcatatggttcaacaa 19558352  T
Q  203 ctccatacaa 212  Q
    ||| ||||||    
T  19558353 ctcgatacaa 19558362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 446
Target Start/End: Complemental strand, 19082167 - 19082067
Alignment:
Q  346 aattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggc 445  Q
    |||||||||||||| ||||||| ||| ||||| ||||| |||||||||| |||||| ||| |||| || | |||||| ||||||||||||||||||||||    
T  19082167 aattgaaccaaaactaagtaaacaaattctagtgcctcaactatgtatacacttagttcacatataagtgcagttgagtatacatgtgcgtttcaccggc 19082068  T
Q  446 c 446  Q
    |    
T  19082067 c 19082067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 17376823 - 17376699
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | |||||||||||||||||   ||||||||||  ||||||||||||| |||||| || ||||||||||||| |||||| ||    
T  17376823 aacatatatgcattcaccgacaatatcacaatcaatca---tatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaaccaacatcaa 17376727  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||| |||||||| || |||||| |||||    
T  17376726 ctaaatcatataatttaacaaccccata 17376699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 54364838 - 54364717
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  ||||||||||||| || ||| || ||||||| ||| | ||||||  |    
T  54364838 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaacatcga 54364739  T
Q  182 ctatatcatatagttcaacaac 203  Q
    || ||||||||| |||||||||    
T  54364738 ctttatcatataattcaacaac 54364717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 19558269 - 19558319
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  19558269 aacatatatgtattcaccaacaatatcacaatcaatcaacagatatgtatt 19558319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 14570156 - 14570277
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  ||||| ||||||| |||||| || ||||||| ||| | ||| || ||    
T  14570156 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa 14570255  T
Q  182 ctatatcatatagttcaacaac 203  Q
    ||  |||||| | |||||||||    
T  14570256 cttcatcataaaattcaacaac 14570277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 19082396 - 19082309
Alignment:
Q  135 ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaacttcatacaa 222  Q
    ||||||||||||||||||||||| |||||| |||| | ||||||  |||| |||||||| ||||| |||| ||| ||| ||| |||||    
T  19082396 ccaacaatatcaccatcaattaatatatatacattcaccaacatcgactacatcatataattcaataacttcatgcaatttcttacaa 19082309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 49070698 - 49070764
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccata 209  Q
    |||| |||||||| | ||| || ||||||||||||| |||||||| |||||| ||||||||||||||    
T  49070698 atcaacatcaattgatatacatacattaatcaacatcaactatataatatagctcaacaactccata 49070764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 38763675 - 38763724
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaactt 215  Q
    |||||||| || | ||||||||||||||||||||||||| ||||||||||    
T  38763675 cattaatccacttcaactatatcatatagttcaacaacttcatacaactt 38763724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 9621748 - 9621792
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| | ||||||||||||||| ||| ||||||||||||    
T  9621748 tcaaatatctccgtataatcatatcaaattattcacaaaagattt 9621792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 24237760 - 24237828
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccataca 211  Q
    |||| |||||||| | ||| || ||||||||||||| ||||||||  ||||  ||||||||||||||||    
T  24237760 atcaacatcaattgatatacatacattaatcaacatcaactatatattatatctcaacaactccataca 24237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 231 - 459
Target Start/End: Complemental strand, 17759500 - 17759273
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||| |||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17759500 atatctccatataatcataacaaactatgcacaaaagattttccaagtatttggtcttaaagattattttcgacaaagttcgtctctcataatacaactt 17759401  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  17759400 taaaataattgagacaattgaaccaaaaccaagaaaataaactcta-gccctcgactatgtatacacttagatcacatatgagtgtagttgaatatacat 17759302  T
Q  431 gtgcgtttcaccggccgactacgacaaaa 459  Q
    |||||||||||||||||||||||||||||    
T  17759301 gtgcgtttcaccggccgactacgacaaaa 17759273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 231 - 459
Target Start/End: Complemental strand, 19060820 - 19060593
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||| |||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19060820 atatctccatataatcataacaaactatgcacaaaagattttccaagtatttggtcttaaagattattttcgacaaagttcgtctctcataatacaactt 19060721  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  19060720 taaaataattgagacaattgaaccaaaaccaagaaaataaactcta-gccctcgactatgtatacacttagatcacatatgagtgtagttgaatatacat 19060622  T
Q  431 gtgcgtttcaccggccgactacgacaaaa 459  Q
    |||||||||||||||||||||||||||||    
T  19060621 gtgcgtttcaccggccgactacgacaaaa 19060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 227 - 459
Target Start/End: Complemental strand, 40040289 - 40040057
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattaca 326  Q
    |||||||||| |||||||||||| | |||||||||||||| |||||| ||||||||| ||||||| ||||| | |||||||||||||||||||| |||||    
T  40040289 tcaaatatctccatataatcataaccaactatccacaaaatatttgccaagtatttgatcttaaatattatgtccgacaaagttcgtctctcattttaca 40040190  T
Q  327 actttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatat 426  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  40040189 actttaaaacaattgagacaaatgaaccaaaaccaagtaaataaattctagggcctcgactatgtatatacttagatcacatatgagtgtagttgaatat 40040090  T
Q  427 acatgtgcgtttcaccggccgactacgacaaaa 459  Q
    ||| |||||||||| ||||||||||||||||||    
T  40040089 acacgtgcgtttcatcggccgactacgacaaaa 40040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 227 - 459
Target Start/End: Complemental strand, 37917540 - 37917308
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattaca 326  Q
    |||||||| | |||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||||||||||||| |||||    
T  37917540 tcaaatatgtccatataatcataaccaactatccacaaaagatttgccaagtatttggtctgaaagattatgtccgataaagttcgtctctcattttaca 37917441  T
Q  327 actttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatat 426  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||| | |||||| ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  37917440 actttaaaacaattgagacaaatgaacaaaaaccaagtaaataaattatagggcttcgactatgtatatacttagatcacatatgagtgtagttgaatat 37917341  T
Q  427 acatgtgcgtttcaccggccgactacgacaaaa 459  Q
    |||||||||||||||| ||||||||||||||||    
T  37917340 acatgtgcgtttcacccgccgactacgacaaaa 37917308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 25105135 - 25104915
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||    
T  25105135 atatctccatataatcataacaaactatccacaaaagatttgccaagtatttggtcttaaggattcttttcgacaaagttcatctctcattttacaactt 25105036  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||  ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||         || ||||||| ||||||||||||||||    
T  25105035 taaagcaattgagacaaatgaaccaaatccaaggaaataaactctagggcctcgactatgtata---------cacatatgagtgtagttgaatatacat 25104945  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||||||||||||||    
T  25104944 gtgcgtttcaccggccgactacgacaaaat 25104915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 8603729 - 8603960
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaa-gatttgctaagtatttggtcttaaagattatttt-cgacaaagttcgtctctcatattacaac 328  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| ||| | |||| |||||| |||||||| |||||||||||||||||||| |||||||    
T  8603729 atatcttcacataatcatatcaaactatccacaaaaagatttgcaaagcaattggccttaaaaattatttttcgacaaagttcgtctctcattttacaac 8603828  T
Q  329 tttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatac 428  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| | ||||| |||||     
T  8603829 tttaaaataattgagacaaatgaaccaaaaccaagtatataaactctagggcctcgactatgtatacacttagatcacatatgagtgcagttgcatatat 8603928  T
Q  429 atgtgcgtttcaccggccgactacgacaaaat 460  Q
    | ||| |||||||||||| |||| ||||||||    
T  8603929 acgtgtgtttcaccggccaactatgacaaaat 8603960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 293 - 457
Target Start/End: Original strand, 15549573 - 15549737
Alignment:
Q  293 attattttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgta 392  Q
    ||||||| || |||||||||||||||||  ||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  15549573 attatttccggcaaagttcgtctctcattctacaactctaaaataattgagacaaatgaaccaataccaagtatataaactctagggcctcgactatgta 15549672  T
Q  393 taaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaa 457  Q
    || |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15549673 tacacttagatcacatatgagtgtagttgaatatacatgtgcgtttcatcggccgactacgacaa 15549737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 297 - 460
Target Start/End: Original strand, 18738909 - 18739070
Alignment:
Q  297 ttttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaa 396  Q
    ||||||| |||||||||||||| | |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |    
T  18738909 ttttcgataaagttcgtctctccttttacaactttaaaacaat-gagacaaatgaaccaaaaccaagtaaataaactctagg-cctcgactatgtataca 18739006  T
Q  397 cttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||| ||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||    
T  18739007 cttagatcacatatgagtgtagttgagtatacatgtgcatttcaccggccgaccacgacaaaat 18739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 11401475 - 11401605
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||    
T  11401475 aacatatatgcattcaccgacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaa 11401574  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    || |||||||||||||||||||| |||||||    
T  11401575 ctttatcatatagttcaacaacttcatacaa 11401605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 324 - 460
Target Start/End: Original strand, 17937567 - 17937701
Alignment:
Q  324 acaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaa 423  Q
    |||||||||||| ||| |||||||||| |||||||| || ||||||||||||||| ||||||||| ||||| | |||||||| ||||||| ||| ||||     
T  17937567 acaactttaaaacaat-gagacaattgcaccaaaactaaataaataaactctagg-cctcgactacgtatacaattagatcacatatgagtgtatttgag 17937664  T
Q  424 tatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  17937665 tatacgtgtgcgtttcaccggccgaccacgacaaaat 17937701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 17392452 - 17392535
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctc 316  Q
    ||||||||||| | |||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  17392452 atcttcatatatttatatcaaactatccgcaaaagattttccaagtatttgatcttaaagattattttcgacaaagttcgtctc 17392535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 17759714 - 17759582
Alignment:
Q  82 gaacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacata- 179  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||  ||||||| |||  |||||||||| ||||||||| || |||||||      
T  17759714 gaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatgcaatattcaacatgc 17759615  T
Q  180 ---aactatatcatatagttcaacaactccata 209  Q
       |||||||||||||| || ||||||||||||    
T  17759614 atcaactatatcatataatttaacaactccata 17759582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 19061034 - 19060902
Alignment:
Q  82 gaacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacata- 179  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||  ||||||| |||  |||||||||| ||||||||| || |||||||      
T  19061034 gaacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatgcaatattcaacatgc 19060935  T
Q  180 ---aactatatcatatagttcaacaactccata 209  Q
       |||||||||||||| || ||||||||||||    
T  19060934 atcaactatatcatataatttaacaactccata 19060902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 5229324 - 5229252
Alignment:
Q  138 acaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccatac 210  Q
    |||||||||| |||||| || ||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  5229324 acaatatcacaatcaatcaacatatatgcattaatcgacatcaactatatcatattgttcaacaactccatac 5229252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 8603542 - 8603642
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaa 202  Q
    |||||||||||||||  | |||||||||||  |||||||||||   ||||||||| | |||||||||| ||||||| |||||||||||||||||||||||    
T  8603542 aatatcacaatcaattgatatatatgtattcaccaacaatatccttatcaattaacacatatgcattattcaacatcaactatatcatatagttcaacaa 8603641  T
Q  203 c 203  Q
    |    
T  8603642 c 8603642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 306 - 394
Target Start/End: Complemental strand, 13327656 - 13327569
Alignment:
Q  306 aagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtata 394  Q
    |||| |||||||| | |||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||| ||||||| |||||||    
T  13327656 aagtccgtctctccttttacaactttaaaacaat-gagacaattgaaccaaaactaagtacataaactctaggacctcgaccatgtata 13327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 11883367 - 11883276
Alignment:
Q  297 ttttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatg 390  Q
    ||||||| |||||  ||||||||| |||||||||||||| ||| ||||||||||||||||| | ||||| ||||||||||||| ||||||||||    
T  11883367 ttttcgataaagtctgtctctcattttacaactttaaaacaat-gagacaattgaaccaaa-ctaagtatataaactctagggtctcgactatg 11883276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 38377041 - 38376997
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatata 127  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  38377041 aacatacatgtattcaccaacaatatcataatcaatcaacatata 38376997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 11516828 - 11516778
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| || ||| |||||||||||||||||||||||    
T  11516828 aacatatatgtattcaccaacaacatctcaatcaatcaacatatatgtatt 11516778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 14970089 - 14970147
Alignment:
Q  387 tatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggc 445  Q
    ||||||||  ||||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  14970089 tatgtatactcttagatcacatatgagtgcagttgaatatacatgtacgtttcaccggc 14970147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 17392279 - 17392329
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| || |||||||| ||||||||||||||||||    
T  17392279 aacatatatgtattcaccaacaacatcacaataaatcaacatatatgtatt 17392329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 25105257 - 25105211
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  25105257 cattaatcaacttcaactatatcatttagttcaacaactccatacaa 25105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 43428833 - 43428787
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||    
T  43428833 cattaatcaacttccactatatcatatagttcaacaactccatacaa 43428787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 12918128 - 12918084
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||    
T  12918128 tcaaatatctccatataatcatatcatattatccacaaaagattt 12918084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 45804142 - 45804098
Alignment:
Q  227 tcaaatatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||    
T  45804142 tcaaatatctccatataatcatatcaatttatccacaaaagattt 45804098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 51962236 - 51962165
Alignment:
Q  322 ttacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtata 394  Q
    |||||||||||||| ||| ||||||||||||| |||||  |||| |||||||||||| |||| || |||||||    
T  51962236 ttacaactttaaaacaat-gagacaattgaactaaaactgagtatataaactctaggacctcaaccatgtata 51962165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 38376870 - 38376831
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatt 270  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  38376870 atatcttcatataatgatatcaaactattcacaaaagatt 38376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 5229343 - 5229297
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||||| ||| ||||||| | ||||||||||||||||||||||||||    
T  5229343 aacatatatgcattcaccgacaatatcacaatcaatcaacatatatg 5229297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 17759729 - 17759667
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| | |||| || |||||||    
T  17759729 aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatg 17759667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 18968989 - 18969039
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaacttc 216  Q
    |||||||| || | |||||||||||||||||||||| |||||| |||||||    
T  18968989 cattaatccacttcaactatatcatatagttcaacagctccattcaacttc 18969039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 19061049 - 19060987
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| | |||| || |||||||    
T  19061049 aatatcacaatcaatgaacatatatgtattcaccaacaatatcacaaccaatcaacatatatg 19060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 172; Significance: 3e-92; HSPs: 3)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 233 - 460
Target Start/End: Original strand, 9923 - 10150
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  9923 atcttcatataatcatatcaaactatcaacaaaagattagccaagtatttggtcttaaagattattttcaacaaagttcgtctctcattttacaacttta 10022  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||||||    
T  10023 aaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactacgtatacacttagatcacatatgagtgtagttgaatatacatgt 10122  T
Q  433 gcgtttcaccggccgactacgacaaaat 460  Q
    || ||||||| | |||| ||||||||||    
T  10123 gcatttcaccagacgaccacgacaaaat 10150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 9711 - 9841
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||| | ||||  ||||||||||||||||||||||  |||||||||||||||||||| ||    
T  9711 aacatatatgtattgaccaacaatatcacaatcaatcaacatatctatattcaccaacaatatcaccatcaattatcatatatgcattaatcaacatcaa 9810  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||||||||||||||    
T  9811 ctatatcatatagttcaacaactccatacaa 9841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 9674 - 9746
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaat 154  Q
    |||||| ||| | ||||| | ||||| ||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  9674 aacatatatgcactcaccgacaatatgacaatcaattaacatatatgtattgaccaacaatatcacaatcaat 9746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 5e-91; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 20177042 - 20176814
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20177042 atatcttcatataatcatatcaaactatccacaaaagattttccaagtatttggtcttta-gattattttcgacaaagttcgtctctcatattacaactt 20176944  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||| ||||| |||| ||||||| ||||||||||||||||    
T  20176943 taaaataattgagacaaattaaccaaaaccaagtaaataaactctagggccttgactatatatacacttatatcacatatgagtgtagttgaatatacat 20176844  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
     |||||||||||||||||| ||||||||||    
T  20176843 atgcgtttcaccggccgaccacgacaaaat 20176814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 20221769 - 20221541
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20221769 atatcttcatataatcatatcaaactatccacaaaagattttccaagtatttggtcttta-gattattttcgacaaagttcgtctctcatattacaactt 20221671  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||| ||||| |||| ||||||| ||||||||||||||||    
T  20221670 taaaataattgagacaaattaaccaaaaccaagtaaataaactctagggccttgactatatatacacttatatcacatatgagtgtagttgaatatacat 20221571  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
     |||||||||||||||||| ||||||||||    
T  20221570 atgcgtttcaccggccgaccacgacaaaat 20221541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 19332675 - 19332445
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaa-gatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  19332675 atatcttcatataatcatatcaaactatccacaaaaagatttgctaagcaattggtcttaaaaattattttcgacaaggttcgtctctcattttacaact 19332576  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| || ||| |||| ||||||    
T  19332575 ttaaaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagaccacatataagtgtaattgattataca 19332476  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||| ||| |||||||||||||||    
T  19332475 tgtgcgtttcatcggtcgactacgacaaaat 19332445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 235 - 458
Target Start/End: Original strand, 11543625 - 11543848
Alignment:
Q  235 cttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaa 334  Q
    |||||| |||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  11543625 cttcatttaatcataacaaactatcctcaaaagatttgacaagtatttggtcttaaagattattttcgacaaagttcgtctctcaatttacaactttaaa 11543724  T
Q  335 ataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgc 434  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||    
T  11543725 ataattgagacaaatgaaccaaaaccaagtaattaaattctagggcctcgactatgtatacacttagatcacatatgaatgtagttgaatatacatgtgc 11543824  T
Q  435 gtttcaccggccgactacgacaaa 458  Q
     |||||||||| ||| ||||||||    
T  11543825 ttttcaccggcagaccacgacaaa 11543848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 235 - 460
Target Start/End: Original strand, 22312780 - 22313004
Alignment:
Q  235 cttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaa 334  Q
    |||||| | |||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  22312780 cttcatttcatcataacaaactattcacaaaagatttgccaagtatttcgtcttaaaaattattttcgacaaagttcgtctctcattctacaactttaaa 22312879  T
Q  335 ataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgc 434  Q
    |||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||    
T  22312880 ataattgatacaaa-gaaccaaaaccaagtagataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatatagatgtgc 22312978  T
Q  435 gtttcaccggccgactacgacaaaat 460  Q
    ||||||| ||||||| ||||||||||    
T  22312979 gtttcacgggccgaccacgacaaaat 22313004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 236 - 457
Target Start/End: Original strand, 17501040 - 17501261
Alignment:
Q  236 ttcatataatcatatcaaactatccacaaaagatttgctaag-tatttggtctta--aagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    ||||| ||||||||| || ||||||||||||||||   |||| || |||||||||  || |||||||||||||||||||||||||||| |||||||| ||    
T  17501040 ttcatttaatcatataaagctatccacaaaagatta--taaggtaattggtcttacaaaaattattttcgacaaagttcgtctctcattttacaactcta 17501137  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||||||||||||||  ||||||||  ||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  17501138 aaataattgagacagatgaaccaat-ccaagtatataaactctagtgcctcgactatgtatacacttagatcacatatgagtgtagttgaatatacatgt 17501236  T
Q  433 gcgtttcaccggccgactacgacaa 457  Q
    ||||||||||||| |||||||||||    
T  17501237 gcgtttcaccggctgactacgacaa 17501261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 25295077 - 25295306
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagatt-attttcgacaaagttcgtctctcatattacaact 329  Q
    |||||||||||||||||||| ||  ||||||||||| ||||   | ||| ||||  |||||||   |||||||||||||||||||||||||   ||||||    
T  25295077 atatcttcatataatcatataaagatatccacaaaatatttataaggtaattggctttaaagaaccattttcgacaaagttcgtctctcattacacaact 25295176  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||| ||||||    
T  25295177 t-agaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagatcacataggagtgtagttgattataca 25295275  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||| | ||| ||||||||||    
T  25295276 tgtgcgtttcaccgactgaccacgacaaaat 25295306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 45560276 - 45560047
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagatt-attttcgacaaagttcgtctctcatattacaact 329  Q
    |||||||||||||||||||| |   ||||||||||||||||   | ||| ||||  |||||||   |||||||||||||| |||||||  |   ||||||    
T  45560276 atatcttcatataatcatataatgatatccacaaaagatttataaggtaattggctttaaagaaccattttcgacaaagtccgtctctacttacacaact 45560177  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    | | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  45560176 t-agaacaattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatataca 45560078  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||| ||||||||||    
T  45560077 tgtgcgtttcaccggccgaccacgacaaaat 45560047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 25756889 - 25757019
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||    
T  25756889 aacatatatgtattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaa 25756988  T
Q  182 ctatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||||||||||||||    
T  25756989 ctatatcatatagttcaacaactccatacaa 25757019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 25757097 - 25757326
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagatt-attttcgacaaagttcgtctctcatattacaact 329  Q
    |||||||||||||||||||| ||  ||||||||||| ||||   | ||| ||||  |||||||   |||||||||||||| ||||||||||   ||||||    
T  25757097 atatcttcatataatcatataaagatatccacaaaatatttataaggtaattggctttaaagaaccattttcgacaaagtacgtctctcattacacaact 25757196  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||| ||||    
T  25757197 t-agaataattgagacaaatgaaccaaaaccaagtaaataaactctagggcctcgactatgtatacacttagatcacataggagtgtagttgaatgtaca 25757295  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
     ||||||||||||| |||||  |||||||||    
T  25757296 cgtgcgtttcaccgaccgaccgcgacaaaat 25757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 34013032 - 34012895
Alignment:
Q  323 tacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttga 422  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||| ||||||| ||||||||    
T  34013032 tacaactctaaaataattgagacaaatgaaccaaaaccaagtatataaactttagggcctcgactatgtatacacttaaatcacatatgagtgtagttga 34012933  T
Q  423 atatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34012932 atatacatgtgcgtttcaccggacgactacgacaaaat 34012895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 25294880 - 25294999
Alignment:
Q  94 attcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatat 192  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  25294880 attcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactatatcatat 25294979  T
Q  193 agttcaacaactccatacaa 212  Q
    ||||||||||||||||||||    
T  25294980 agttcaacaactccatacaa 25294999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 231 - 445
Target Start/End: Complemental strand, 18119100 - 18118892
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||      ||||||||||||||||||||||||  |||||| ||    
T  18119100 atatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttgatctta------attttcgacaaagttcgtctctcactttacaattt 18119007  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    |||||||||||| |||| | ||  || |||||||||  ||  || |  ||||| |||||||||| || |||| || | ||||| ||||| || |||||||    
T  18119006 taaaataattgaaacaaataaattaagaccaagtaaccaagatccaatgcctcaactatgtatacacctagaccacacatgagtgtagtagagtatacat 18118907  T
Q  431 gtgcgtttcaccggc 445  Q
    |||||||||||||||    
T  18118906 gtgcgtttcaccggc 18118892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 3845204 - 3845119
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctc 316  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  3845204 atatctttatataatcatatcaaactatccacaaaagatttgccaagtatttggtcttacagattattttcgacaaagttcgtctc 3845119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 83 - 210
Target Start/End: Original strand, 11543414 - 11543542
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  |||||||||| || |||||  || |||||||||||||||||||| ||    
T  11543414 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatgcattaatcaacatcaa 11543513  T
Q  182 ctatatcatatagttcaacaactccatac 210  Q
    |||||||||||||||||||||||||||||    
T  11543514 ctatatcatatagttcaacaactccatac 11543542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 45560473 - 45560350
Alignment:
Q  94 attcaccaataatatcacaatcaatcaacatatatgtatttccaa-caatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatat 192  Q
    ||||||| | ||||||||||||||| || |||||||||||  ||| ||||||||| |||||  || |||||||||||||||||||| |||||||||||||    
T  45560473 attcaccgacaatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatgcattaatcaacatcaactatatcatat 45560374  T
Q  193 agttcaacaactccatacaacttc 216  Q
    ||||||||||||||||||||||||    
T  45560373 agttcaacaactccatacaacttc 45560350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 83 - 210
Target Start/End: Original strand, 22312569 - 22312697
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||| |||||||||  |||||||||||||  ||||||||||||| |||||  || |||||||||||||||||||| ||    
T  22312569 aacatatatgcattcaccgacaatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatgcattaatcaacatcaa 22312668  T
Q  182 ctatatcatatagttcaacaactccatac 210  Q
    |||||||||||||||||||||||||||||    
T  22312669 ctatatcatatagttcaacaactccatac 22312697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 24907017 - 24907106
Alignment:
Q  371 actctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||||| |||||    
T  24907017 actctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatatacatgcgtgtttcactggccgactacgagaaaat 24907106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 3845409 - 3845282
Alignment:
Q  84 acatacatgtattcaccaataatatcacaatcaatcaacatatatgtatttccaacaatatcaccatcaattaaaatatatgcattaatcaacataaact 183  Q
    ||||| ||| ||||||||| |||||||  ||||||  ||||||||| |||  |  |||||||||||||| |||| ||||||||| ||||||  || ||||    
T  3845409 acatatatgcattcaccaacaatatcaacatcaattgacatatatgcattcacc-caatatcaccatcacttaacatatatgcactaatcattatcaact 3845311  T
Q  184 atatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||||||||||||    
T  3845310 atatcatatagttcaacaactccatacaa 3845282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 20177288 - 20177205
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| || |||||||    
T  20177288 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 20222015 - 20221932
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| || |||||||    
T  20222015 aacatatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20221932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 345
Target Start/End: Original strand, 24906904 - 24907018
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||||||||||||| |  |||| ||||||||||||   | ||| | ||||||| ||||||||||||||||  |||||||||||| || ||||||    
T  24906904 atatcttcatataatcatataaggctattcacaaaagatttataaggtaatcggtcttagagattattttcgacaagattcgtctctcattttgcaactt 24907003  T
Q  331 taaaataattgagac 345  Q
    |||| ||||||||||    
T  24907004 taaattaattgagac 24907018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 19332902 - 19332819
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||||||||||| | |||||||||| |||||||||||||||||||| ||||||||||| | |||||| || |||||||    
T  19332902 aacatatatgtattcacccacaatatcacaaccaatcaacatatatgtatttaccaacaatatctcaatcaatcaacatatatg 19332819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 16000940 - 16000990
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  16000940 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtatt 16000990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 7469147 - 7469197
Alignment:
Q  166 cattaatcaacataaactatatcatatagttcaacaactccatacaacttc 216  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  7469147 cattaatcagcttcaactatatcatatagttcaacaactccatacaacttc 7469197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 19332865 - 19332800
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcac 147  Q
    |||||| ||||||| ||||| |||||| |||||||||||||||||||||||  |||||||||||||    
T  19332865 aacatatatgtatttaccaacaatatctcaatcaatcaacatatatgtattcaccaacaatatcac 19332800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 20177251 - 20177202
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtat 132  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  20177251 aacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtat 20177202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 20221978 - 20221929
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtat 132  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  20221978 aacatatatgtattgaccaacaatatcacaatcaatcaacatatatgtat 20221929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 25608964 - 25609067
Alignment:
Q  90 atgtattcaccaataatatcacaatcaatcaacatatatgtatttccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatca 189  Q
    ||||||||||||| |||||||||| |||||||||||||||||||  || ||        | |||| || ||||||| ||||||| |||| ||||||||||    
T  25608964 atgtattcaccaacaatatcacaaccaatcaacatatatgtatt--cacca--------accaatcaacatatatgtattaatccacatcaactatatca 25609053  T
Q  190 tatagttcaacaac 203  Q
    ||||||||||||||    
T  25609054 tatagttcaacaac 25609067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 22498577 - 22498525
Alignment:
Q  159 atatatgcattaatcaacataaactatatcatatagttcaacaactccataca 211  Q
    |||||| ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  22498577 atatatacattaatcaacatcaactatataatatagttcaaccactccataca 22498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 19332795 - 19332756
Alignment:
Q  170 aatcaacataaactatatcatatagttcaacaactccata 209  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  19332795 aatcaacatcaactatatcatatagttcaacaactccata 19332756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 20177214 - 20177164
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  20177214 aacatatatgtatccaccaataatataacaattaatcaacatatatgtatt 20177164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 20221941 - 20221891
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  20221941 aacatatatgtatccaccaataatataacaattaatcaacatatatgtatt 20221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 18122610 - 18122570
Alignment:
Q  302 gacaaagttcgtctctcatattacaactttaaaataattga 342  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  18122610 gacaaagttcgtctctcactttacaactttaaaataattga 18122570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 24238445 - 24238517
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaat 154  Q
    |||||| ||| ||||||| | ||||||||||||||| ||| ||||||||||  ||||||||||||| ||||||    
T  24238445 aacatatatgcattcaccgacaatatcacaatcaattaacttatatgtattcaccaacaatatcacaatcaat 24238517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 19332939 - 19332856
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  || |||||||||| | |||| || |||||||    
T  19332939 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcacccacaatatcacaaccaatcaacatatatg 19332856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 24238489 - 24238524
Alignment:
Q  90 atgtattcaccaataatatcacaatcaatcaacata 125  Q
    ||||||||||||| ||||||||||||||||||||||    
T  24238489 atgtattcaccaacaatatcacaatcaatcaacata 24238524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 16000916 - 16000986
Alignment:
Q  96 tcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||| || ||| |||||| ||||||||||||||||  ||||||||||||| |||||| || |||||||    
T  16000916 tcaccaacaacatctcaatcactcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 16000986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 25294906 - 25294952
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||||| ||||||||||||| |||||||| |||||| ||||||||||    
T  25294906 aacatatatgtattcaccaacaatatcaccatcaattaacatatatg 25294952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 25756873 - 25756935
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||| |||||| || |||||||    
T  25756873 aatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatg 25756935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 19332828 - 19332787
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacat 124  Q
    |||||| ||||||||||||| |||||||||| ||||||||||    
T  19332828 aacatatatgtattcaccaacaatatcacaaccaatcaacat 19332787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 33171132 - 33171196
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactcca 207  Q
    |||| |||||||||| |||||  ||||||||||||| ||| |||| ||||||||| || ||||||    
T  33171132 atcaacatcaattaatatataaacattaatcaacatcaaccatataatatagttccactactcca 33171196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 38636948 - 38636912
Alignment:
Q  180 aactatatcatatagttcaacaactccatacaacttc 216  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  38636948 aactatatcatatagttcaacaacttcatataacttc 38636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 167; Significance: 3e-89; HSPs: 9)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 230 - 460
Target Start/End: Complemental strand, 4436 - 4206
Alignment:
Q  230 aatatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  4436 aatatcttcatataatcatatcaaactatctacaatagatttgccaagtatttcgtcttaaagattattttcgacaaagttcgtctctcattctacaact 4337  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
     ||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  4336 ctaaaataattgagacaaatgaacaaaaaccaagtatataaactctagagcctcgactatgtatactcttagatcacatatgagtgtagttgaatataca 4237  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||| ||||||||||    
T  4236 tgtgcgtttcaccggccgaccacgacaaaat 4206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 5899 - 5780
Alignment:
Q  94 attcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatat 192  Q
    ||||||| | ||||||||||||||| | ||||||||||||  ||||||||||||| |||||| || |||||||||||||||||| | |||||||||||||    
T  5899 attcaccgacaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactatatcatat 5800  T
Q  193 agttcaacaactccatacaa 212  Q
    ||||||||||||||||||||    
T  5799 agttcaacaactccatacaa 5780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 35868 - 35786
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgt 313  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  35868 atatcttcatataatcatatcaaactatccacaaaagattttccaagtatttggttttaaagattattttcgacaaagttcgt 35786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 1509 - 1400
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaa 202  Q
    ||||||||||||||| | ||||||||||||  ||||||||||||| |||||| || |||||||||||||||||| | |||||||||||||||||||||||    
T  1509 aatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactatatcatatagttcaacaa 1410  T
Q  203 ctccatacaa 212  Q
    ||||||||||    
T  1409 ctccatacaa 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 53 - 1
Alignment:
Q  230 aatatcttcatataatcatatcaaactatccacaaaagatttgctaagtattt 282  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  53 aatatcttcatataatcatatcaaactatctacaatagatttgccaagtattt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 1491 - 1447
Alignment:
Q  85 catacatgtattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  1491 catatatgtattcaccaacaatatcacaatcaatcaacatatatg 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 5871 - 5827
Alignment:
Q  85 catacatgtattcaccaataatatcacaatcaatcaacatatatg 129  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  5871 catatatgtattcaccaacaatatcacaatcaatcaacatatatg 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 36038 - 35993
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatat 128  Q
    |||||| |||||||||| || |||||| ||||||||||||||||||    
T  36038 aacatatatgtattcactaacaatatctcaatcaatcaacatatat 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 36064 - 36025
Alignment:
Q  93 tattcaccaataatatcacaatcaatcaacatatatgtatt 133  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  36064 tattcaccaacaatatcacaatc-atcaacatatatgtatt 36025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 165; Significance: 5e-88; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 231 - 460
Target Start/End: Original strand, 11690 - 11917
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaa-gatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaact 329  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||   ||||||||||||||||||||||||| | ||||||||    
T  11690 atatcttcatataatcatatcaaactatccaaaaaaagatttgccaagtaattggtcttaa---ttattttcgacaaagttcgtctctcgttttacaact 11786  T
Q  330 ttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatataca 429  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  11787 ttaaaataattgagacaaatgaaccaaaaccaagtaactaaactctagggcctcgactatgtatatacttagatcacatatgagtgtagttgaatataca 11886  T
Q  430 tgtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||||||| ||||||||||    
T  11887 tgtgcgtttcaccggccgaccacgacaaaat 11917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 11494 - 11611
Alignment:
Q  96 tcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaaca-taaactatatcatata 193  Q
    ||||||| || ||||| |||| | |||||||||| |||  || ||||||||||||||| | || ||||||||||||||||||| | |||||||| |||||    
T  11494 tcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaccatcagtcaacatatatgcattaatcaacattcaactatataatata 11593  T
Q  194 gttcaacaactccataca 211  Q
      ||||||||| ||||||    
T  11594 actcaacaacttcataca 11611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 163; Significance: 7e-87; HSPs: 4)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 5182 - 4955
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||||||||||   ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  5182 atatcttcatataatcaa--caaactatccacaaaagatttgtcaagtatttggtcttaaagattattttcgacaaagttcgtctctcattttaaaactt 5085  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||    
T  5084 taaaataattgagacaaatgaaccaaaatcaagtaaataaactctagggcctcgactatatatacacttagatcacatatgagtgtagttgaatatacat 4985  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||||||||||||||| || | ||||||||    
T  4984 gtgcgtttcaccggccaaccatgacaaaat 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 5390 - 5262
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||| ||| |||||||||||||||| |||||||||||||  |||||||||||  |||||||||| |||||| ||||| ||||||| ||    
T  5390 aacatatatgcattcaacaacaatatcacaatcaatccacatatatgtattcaccaacaatatcctcatcaattaacatatatacattattcaacatcaa 5291  T
Q  182 ctatatcatatagttcaacaactccatac 210  Q
    ||||||||||||||||||||||| |||||    
T  5290 ctatatcatatagttcaacaacttcatac 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 5426 - 5355
Alignment:
Q  84 acatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaat 154  Q
    ||||| || |||||||||| |||||||||| ||||||||||||||| |||   |||||||||||| ||||||    
T  5426 acatatatttattcaccaacaatatcacaaccaatcaacatatatgcattcaacaacaatatcacaatcaat 5355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 5464 - 5377
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcatt 169  Q
    |||||| ||| ||||||| | |||||||||||||||  |||||||| ||||  ||||||||||||| | |||| || |||||||||||    
T  5464 aacatatatgcattcaccgacaatatcacaatcaattgacatatatttattcaccaacaatatcacaaccaatcaacatatatgcatt 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 162; Significance: 3e-86; HSPs: 3)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 1277 - 1072
Alignment:
Q  255 ctatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaacc 354  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1277 ctatccacaaaagatttgccaagtatttgatcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataattgagacaactgaacc 1178  T
Q  355 aaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgtttcaccggccgactacga 454  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||| |||||||||||||||||||||||||| | ||    
T  1177 aaaatcaagtaaataaactctagggcctcgactatgtatacacttagatcacatatgagtgtggttgagtatacatgtgcgtttcaccggccgaccaaga 1078  T
Q  455 caaaat 460  Q
    ||||||    
T  1077 caaaat 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 1489 - 1362
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||   |||||||||| ||||||||| || ||||||| ||    
T  1489 aacatatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaa 1390  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||||||||||||||||||||||||||||    
T  1389 ctatatcatatagttcaacaactccata 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 1515 - 1443
Alignment:
Q  94 attcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| | |||| || |||||||    
T  1515 attcaccgataatatcacaatcaattaacatatatgtattcaccaacaatatcacaaccaatcaacatatatg 1443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 158; Significance: 7e-84; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 8288 - 8060
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||| ||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||| |||||||||||||  ||||||||    
T  8288 atatattcatgtaatcatatcaaactatccacaaaagatttgtcaagtaattggtcttaaagattatttccgacaaggttcgtctctcattctacaactt 8189  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||    
T  8188 taaaataattgagacaattgaaccaaaaccaagtaaataaactata-ggcctcgacaatgtatacacttatatcacatatgagcgtagttgaatatacat 8090  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    |||  |||||||||||||||||||||||||    
T  8089 gtgtctttcaccggccgactacgacaaaat 8060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 239 - 460
Target Start/End: Complemental strand, 8591 - 8371
Alignment:
Q  239 atataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataa 338  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||| ||||||||| ||    
T  8591 atataatcataacaaactatccacaaaatatttgccaagtatttggtcttaaagattattttcaacaaagttcgtctcctattttacgactttaaaaaaa 8492  T
Q  339 ttgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgtgcgttt 438  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| || |||| |||||||| |||||||||||||||    
T  8491 ttgagacaaatgaacc-aaaccaagtaaatgaactctagggcctcgactatgtatacacttagatcacatttgagtgtagttgagtatacatgtgcgttt 8393  T
Q  439 caccggccgactacgacaaaat 460  Q
    ||| ||||||| | ||||||||    
T  8392 cactggccgaccatgacaaaat 8371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 233 - 461
Target Start/End: Original strand, 76083 - 76311
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    ||||| ||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  76083 atctttatataatcaaaacaaactatccacaaaagatttgccaagtaattggtcttaaagattattttcgacaaggttcgtctctcattttacaacttta 76182  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||| | | |||  |||| || |||||||||    
T  76183 aaatagttgagacaaatgaaccaaaaccaagtaaataagctctagggtctcgactatgcatacacttagatcacacaagagtatagtagagtatacatgt 76282  T
Q  433 gcgtttcaccggccgactacgacaaaatt 461  Q
    |||||||||| | | ||||||||||||||    
T  76283 gcgtttcaccagtcaactacgacaaaatt 76311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 973 - 746
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||||||||| |||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  973 atatcttcatttaatcataacaaactattcacaaaagatttgccaaatatttggtcttaaagattattttcgacaaagttcgtctttcactttacaactt 874  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||||||||  |||||  || |||| ||||| |||||||  |||||||||||||||    
T  873 taaaataattgagacaaatgaaccaaaaccaagtaaataaactgcagggcctcatctatg--tacacttggatcacatatgagtttagttgaatatacat 776  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    | ||||||||||| |||| |||||||||||    
T  775 gcgcgtttcaccgcccgattacgacaaaat 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 231 - 460
Target Start/End: Complemental strand, 12169 - 11940
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    |||| ||||| || ||||||||| |||| |||||  ||||| | ||| ||||||||  ||||||| ||||||||||||||||| ||  || ||| || ||    
T  12169 atatattcatttattcatatcaatctatgcacaagggatttacaaagcatttggtccaaaagattgttttcgacaaagttcgtatcatattttataattt 12070  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  12069 taaaataattgggacaaatgaaccaaaaccaagtaaataaaatctagggcctcgactatgtatacacttagatcacatatgagtgtagttgaatatacat 11970  T
Q  431 gtgcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||||||||||||||||    
T  11969 gtgcgtttcaccggccgactacgacaaaat 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 12282 - 12229
Alignment:
Q  159 atatatgcattaatcaacataaactatatcatatagttcaacaactccatacaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  12282 atatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaa 12229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 231 - 448
Target Start/End: Complemental strand, 14909 - 14705
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactt 330  Q
    ||||| |||||| || ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  14909 atatcgtcatatgattatatcaaactatccacaaaagatttgtcaagtatttggtcttaaaaattattttcgacaaagttcatctctcattttacaactt 14810  T
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacat 430  Q
    ||||||||||| ||||| |||||             | ||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  14809 taaaataattgggacaaatgaac-------------aaaaactctagggtctcgactatgtatacacttagatcacatatgagggtagttgaatatacat 14723  T
Q  431 gtgcgtttcaccggccga 448  Q
    ||||||||||||||||||    
T  14722 gtgcgtttcaccggccga 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 15117 - 14990
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||| ||    
T  15117 aacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcgacatcaa 15018  T
Q  182 ctatatcatatagttcaacaactccata 209  Q
    ||||||||||||||||||||||||||||    
T  15017 ctatatcatatagttcaacaactccata 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 15131 - 15071
Alignment:
Q  106 tatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatg 165  Q
    ||||||||||||| ||||||||||||||  ||||||||||||| |||||| || |||||||    
T  15131 tatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 15071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 233 - 443
Target Start/End: Original strand, 567 - 777
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||||     
T  567 atcttcatataatcatatcaaactatccacaaaagatttgccaagtagttggtcttaaagatcattttcgacaaagttcgtctatcattttacaactttg 666  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||| |||||||||||||||| |||||| ||| ||| ||  |  |  ||||| |||||||||| |||||||||| ||||||| | ||| ||  ||||||||    
T  667 aaacaattgagacaattgaatcaaaactaagcaaacaagtttcaatgcctcaactatgtatacacttagatcacatatgagtggagtagagcatacatgt 766  T
Q  433 gcgtttcaccg 443  Q
     ||||||||||    
T  767 acgtttcaccg 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 21081 - 20955
Alignment:
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||    
T  21081 aaataattgagacaaatgaaccaaa-ccatgtaaataaactctagggcctcgactatgtataaacttagatcacatataagtgtatttgaatatacatgt 20983  T
Q  433 gcgtttcaccggccgactacgacaaaat 460  Q
    ||||||||||||||||| ||||||||||    
T  20982 gcgtttcaccggccgacaacgacaaaat 20955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 21353 - 21232
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||| || ||||||| ||| ||||||||  |    
T  21353 aacatatatgtactcatcaacaatatcacaatcaatcaacatatatgtatttactaacaatatcacaatcaatcaacatatatgtattcatcaacatcga 21254  T
Q  182 ctatatcatatagttcaacaac 203  Q
    || ||||||||| ||| |||||    
T  21253 ctttatcatataattccacaac 21232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 21146 - 21081
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagatta 296  Q
    ||||||| ||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||    
T  21146 atatctttatataatcataaccaactatccacaaatgatttgccaagtatttggtcttaaagatta 21081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 21390 - 21307
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgta-tttccaacaatatcaccatcaattaaaatatatg 165  Q
    |||||| ||||| ||||||| |||||| ||||||||||||||||||||| |   |||||||||||| |||||| || |||||||    
T  21390 aacatatatgtactcaccaacaatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatg 21307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 253 - 379
Target Start/End: Complemental strand, 118670 - 118544
Alignment:
Q  253 aactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataattgagacaattgaa 352  Q
    |||||| |||||||| ||||  || |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  118670 aactattcacaaaaggtttgtaaaatatttggttttaaagatcattttcgacaaagttcgtctctcattttacaactttaaaataattgggacaaatgaa 118571  T
Q  353 ccaaaaccaagtaaataaactctaggg 379  Q
    |||||||||||||||||||||||||||    
T  118570 ccaaaaccaagtaaataaactctaggg 118544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 322 - 460
Target Start/End: Original strand, 7152 - 7290
Alignment:
Q  322 ttacaactttaaaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttg 421  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||| ||||||| | | |||    
T  7152 ttacaacttttaaacaattgagacaattgaaccaaaaccaagtaaacaaactctagtgcctcaactatgtatacacttagatcacatatgagtgcaattg 7251  T
Q  422 aatatacatgtgcgtttcaccggccgactacgacaaaat 460  Q
    | ||||||||| | ||||||||||| |||||||| ||||    
T  7252 agtatacatgtacatttcaccggccaactacgaccaaat 7290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 7154 - 7118
Alignment:
Q  331 taaaataattgagacaattgaaccaaaaccaagtaaa 367  Q
    |||||||||||||||||||||||||||||||||||||    
T  7154 taaaataattgagacaattgaaccaaaaccaagtaaa 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 233 - 434
Target Start/End: Original strand, 9153 - 9352
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaacttta 332  Q
    |||||||||||||| |||||| |||| |||||||||||||| ||||| | ||| |||||||| |||| |||||| |||||| |  | | | ||||||||     
T  9153 atcttcatataatcgtatcaagctatacacaaaagatttgcaaagtactcggttttaaagatcatttccgacaa-gttcgtataacgtttcacaactttt 9251  T
Q  333 aaataattgagacaattgaaccaaaaccaagtaaataaactctagggcctcgactatgtataaacttagatcaaatatgagcgtagttgaatatacatgt 432  Q
    ||  |||||||||||||||| | |||| ||| ||||||| ||||| ||||| |||||||||| |||||||||| ||||||| | |||||| |||||||||    
T  9252 aac-aattgagacaattgaatccaaactaagcaaataaattctagtgcctcaactatgtatacacttagatcacatatgagtgcagttgagtatacatgt 9350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 247001 - 246896
Alignment:
Q  242 taatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgtctctcatattacaactttaaaataattg 341  Q
    |||||| || || |||| |||||||||||||  |||||| | ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  247001 taatcacataaagctattcacaaaagatttgtcaagtatcttgtcttaaagattattttcgacaaggttcgtctatcattttacaactttaaaataattg 246902  T
Q  342 agacaa 347  Q
    | ||||    
T  246901 aaacaa 246896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 247220 - 247099
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatatatgcattaatcaacataaa 181  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||||  ||||| ||||||| |||||| || ||||||| ||| | ||| || ||    
T  247220 aacatatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaa 247121  T
Q  182 ctatatcatatagttcaacaac 203  Q
    ||  |||||| | |||||||||    
T  247120 cttcatcataaaattcaacaac 247099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 255456 - 255373
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtc-ttaaagattattttcgacaaagttcgt 313  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||||||| || ||||||||||||||| |||| ||||||    
T  255456 atatcttcatatattcatatcaaactatccacaaaagatttgccatgtatttgatctttaaagattattttcaacaaggttcgt 255373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 255699 - 255634
Alignment:
Q  90 atgtattcaccaataatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaat 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  255699 atgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaaaatatcacaatcaat 255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 255669 - 255597
Alignment:
Q  83 aacatacatgtattcaccaataatatcacaatcaatcaacatatatgtattt-ccaacaatatcaccatcaat 154  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||| ||||| | ||||||||||| ||||||    
T  255669 aacatatatgtattcaccaaaaatatcacaatcaatccacatatatttatttactaacaatatcacaatcaat 255597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 255594 - 255551
Alignment:
Q  84 acatacatgtattcaccaataatatcacaatcaatcaacatata 127  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  255594 acatatatgtattcaccaacaatatcaaaatcaatcaacatata 255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 255611 - 255551
Alignment:
Q  104 aatatcacaatcaatcaacatatatgtatt-tccaacaatatcaccatcaattaaaatata 163  Q
    |||||||||||||||| |||||||||||||  ||||||||||||  |||||| || |||||    
T  255611 aatatcacaatcaatccacatatatgtattcaccaacaatatcaaaatcaatcaacatata 255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 39194 - 39114
Alignment:
Q  233 atcttcatataatcatatcaaactatccacaaaagatttgctaagtatttggtcttaaagattattttcgacaaagttcgt 313  Q
    ||||||||| |||||||||||||||| || ||||||||| | | ||||| |||||||||||| ||||||||||||||||||    
T  39194 atcttcatacaatcatatcaaactattcataaaagattttcaaggtattcggtcttaaagatcattttcgacaaagttcgt 39114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 2164 - 2124
Alignment:
Q  231 atatcttcatataatcatatcaaactatccacaaaagattt 271  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  2164 atatcttcatatattcatatcaaactatccacaaaagattt 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 755 - 797
Alignment:
Q  161 atatgcattaatcaacataaactatatcatatagttcaacaac 203  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  755 atatgcattaatcaacataaactatatcctatcgttcaacaac 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 34757 - 34689
Alignment:
Q  143 atcaccatcaattaaaatatatgcattaatcaacataaactatatcatatagttcaacaactccataca 211  Q
    |||| |||||||| | |||| | | ||||||||  |||||||||| |||||| ||||||||||||||||    
T  34757 atcaacatcaattgatatatgtactttaatcaatttaaactatataatatagctcaacaactccataca 34689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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