View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9226_high_13 (Length: 264)

Name: NF9226_high_13
Description: NF9226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9226_high_13
NF9226_high_13
[»] chr3 (1 HSPs)
chr3 (1-259)||(8377686-8377942)
[»] chr1 (1 HSPs)
chr1 (26-259)||(41313675-41313906)
[»] chr7 (3 HSPs)
chr7 (26-259)||(2188029-2188260)
chr7 (26-259)||(19632644-19632875)
chr7 (26-259)||(1608554-1608784)
[»] chr5 (5 HSPs)
chr5 (26-259)||(37627132-37627362)
chr5 (26-201)||(37806299-37806469)
chr5 (86-259)||(14276035-14276211)
chr5 (197-259)||(37803636-37803698)
chr5 (26-159)||(33614491-33614623)
[»] chr8 (7 HSPs)
chr8 (26-259)||(29822802-29823032)
chr8 (26-141)||(7093977-7094090)
chr8 (26-141)||(7097710-7097823)
chr8 (165-256)||(7093885-7093976)
chr8 (165-256)||(7097618-7097709)
chr8 (133-259)||(452047-452171)
chr8 (30-125)||(453952-454046)
[»] chr2 (1 HSPs)
chr2 (26-259)||(19215674-19215906)
[»] chr4 (1 HSPs)
chr4 (26-259)||(11991854-11992087)
[»] scaffold0070 (1 HSPs)
scaffold0070 (30-259)||(58693-58907)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 8377686 - 8377942
Alignment:
Q  1 atcatgcttattttgttagtataaattgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  8377686 atcatgcttattttgttagtataaattgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgag--gtcttgcatattttgtt 8377783  T
Q  101 agtcagcgttactgtcggtgtaatcaatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8377784 agtcagcgttactgtcggtgtaatcaatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagt 8377883  T
Q  201 taatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttggg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8377884 taatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttggg 8377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 41313906 - 41313675
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||    
T  41313906 ttgattttgtattgcttggttgtgagtataacttgttgtttcatgcctggattgag--gtcttgcatattttgttagttagcgttactgttggtgtaatc 41313809  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  41313808 aatgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatac 41313709  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    ||||||||| ||||||||| ||||||||||||||    
T  41313708 attcattgtcgcgtggtgctcataattggttggg 41313675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 2188029 - 2188260
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2188029 ttgattttgtattgattggttgtgagtataacttgttgtttcatgcttggattgag--gtcttgcatattttgttagtcagcgttactgtcggtgtaatc 2188126  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2188127 aatgtctctagcaggtggttaagacaatgattaattaagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatac 2188226  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    ||||||||| ||||||||| ||||||||||||||    
T  2188227 attcattgtcgcgtggtgctcataattggttggg 2188260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 19632875 - 19632644
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  19632875 ttgattttgtattgcttcgttgtgagtataacttgttgtttcatgcttggattgag--gtcttgcatattttgttagtcaacgttactgtcggtgtaatc 19632778  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  19632777 aatgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatac 19632678  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    ||||| ||| ||||||||| ||||||||||||||    
T  19632677 attcagtgtcgcgtggtgctcataattggttggg 19632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 1608784 - 1608554
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||||||||||||| |||  ||| | ||||||| ||| |  ||||||||||||||||||||| | |||||||||| |||||||    
T  1608784 ttgattttgtattgcttggttgtgagtataacttgccgttccttgcctggtttgtg--gtcttgcatattttgttagtcggagttactgtcg-tgtaatc 1608688  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  1608687 aatgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctatcttgtggagttaataagcaggtgtcgcatgcatac 1608588  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    |||||| || ||||||||||||||||||||||||    
T  1608587 attcatggtcgcgtggtgcccataattggttggg 1608554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 37627362 - 37627132
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||| || ||||||||||||||    
T  37627362 ttgattttatattgcttggttgtgagtataaattgttgtttcatgccttgattgag--gtctagcatattttgttagtcagcattcctgtcggtgtaatc 37627265  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  37627264 aatgtctctagcaggtggttaagacaatgattaatttagtcgcatactcattgtgagtggtcta-tttgtggagttaatatgcaggtgtcgcatgcatac 37627166  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    ||||||||| || |||||||||||||||||||||    
T  37627165 attcattgtcgcttggtgcccataattggttggg 37627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 37806469 - 37806299
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||   ||||||||||||||||||    
T  37806469 ttgattttgtattgctttgttgtgagtataacttgttatttcatgcctggattgag--gtcttgcatattttgttagtc---gttactgtcggtgtaatc 37806375  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagtt 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  37806374 aatgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagtt 37806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 259
Target Start/End: Complemental strand, 14276211 - 14276035
Alignment:
Q  86 cttgcatattttgttagtcagcgttactgtcggtgtaatcaatgtctctagcaggtggttaagacagtgattaatttagt----cggatattcattgtga 181  Q
    ||||||||||| || |||||| |||| ||||| |||||||  ||||||| |||||||||||||||| |||||||||| ||    |||||| ||||||||     
T  14276211 cttgcatattt-gtaagtcagagttattgtcgatgtaatctgtgtctctggcaggtggttaagacaatgattaatttggttggtcggatactcattgtgt 14276113  T
Q  182 gttgtctattttgtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttggg 259  Q
    ||  |||||||| |||||||||||  || |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  14276112 gtgatctattttttggagttaataatcatgtgtcgcatgcatacattcattgtcgcgtggtgcctataattggttggg 14276035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 37803698 - 37803636
Alignment:
Q  197 gagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttggg 259  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  37803698 gagttaatatgcaggtgtcgcatgcatacattcattgtcgtgtggtgcccataattggttggg 37803636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 33614623 - 33614491
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttc-atgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaat 124  Q
    |||||||||||||| |||||||||||||||| |||||||||  |||| || |||| |  |||||||||||||||| ||||    ||| ||| ||||||||    
T  33614623 ttgattttgtattgtttggttgtgagtataatttgttgtttttatgcgtgaattgtg--gtcttgcatattttgtaagtcgaaattattgttggtgtaat 33614526  T
Q  125 caatgtctctagcaggtggttaagacagtgattaa 159  Q
       ||||||| | | |||||||||||| |||||||    
T  33614525 ttgtgtctctcgtatgtggttaagacaatgattaa 33614491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 29822802 - 29823032
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |  ||||||||||||||||||||| | ||||||||||||||||||    
T  29822802 ttgattttgtattgcttggttgtgagtatgacttgttgtttcatgcttggattgtg--gtcttgcatattttgttagtcggagttactgtcggtgtaatc 29822899  T
Q  126 aatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatac 225  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  29822900 aatgtctctagcaggtggttaagaccatgattaatttagtcagatactcattgtgagtggtctattttgtggag-taataagcaggtgtcgcatgcatac 29822998  T
Q  226 attcattgttgcgtggtgcccataattggttggg 259  Q
    ||||||||| ||||||||||||||||||||||||    
T  29822999 attcattgtcgcgtggtgcccataattggttggg 29823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 7094090 - 7093977
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7094090 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgag--gtcttgcatattttgttagtcagcgttactgtcggtgtaatc 7093993  T
Q  126 aatgtctctagcaggt 141  Q
    ||||||||||||||||    
T  7093992 aatgtctctagcaggt 7093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 7097823 - 7097710
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7097823 ttgattttgtattgcttggttgtgagtataaattgttgtttcatgcctggattgag--gtcttgcatattttgttagtcagcgttactgtcggtgtaatc 7097726  T
Q  126 aatgtctctagcaggt 141  Q
    ||||||||||||||||    
T  7097725 aatgtctctagcaggt 7097710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 7093976 - 7093885
Alignment:
Q  165 tcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggtt 256  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7093976 tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggtt 7093885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 7097709 - 7097618
Alignment:
Q  165 tcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggtt 256  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7097709 tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggtt 7097618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 452171 - 452047
Alignment:
Q  133 ctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacattcatt 232  Q
    |||||||||||||||||   |||||||||||||||| || |||||  |||  || | ||||||||||||||||  |||||||| ||||||||||||||||    
T  452171 ctagcaggtggttaagaa--tgattaatttagtcggttactcattaagagcggtgttttttgtggagttaataatcaggtgtcacatgcatacattcatt 452074  T
Q  233 gttgcgtggtgcccataattggttggg 259  Q
    || | ||||||||||||||||||||||    
T  452073 gtcgtgtggtgcccataattggttggg 452047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 454046 - 453952
Alignment:
Q  30 ttttgtattgcttggttgtgagtataaattgttgttt-catgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatc 125  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||  || |||| |  |||||||||||||||| |||| | | || |||||||||||||    
T  454046 ttttgtattgcttggttgtgaatataacttgttgttttcatgtatgaattgtg--gtcttgcatattttgtaagtcggagctattgtcggtgtaatc 453952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 19215674 - 19215906
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgttt-catgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaat 124  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||| |  |||||||||||||||| |||| |  ||||| ||||||||||    
T  19215674 ttgattttgtattgcttggttgtgagtataacttgttgttttcatgtctgaattgtg--gtcttgcatattttgtaagtcggtattactatcggtgtaat 19215771  T
Q  125 caatgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcata 224  Q
    || |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||| |||||||||    
T  19215772 cagtgtctctagcaggtggttaagataatgattaatttagtcggatactcattgtgagtggcctattttgtggagttaataagcaggtgttgcatgcata 19215871  T
Q  225 cattcattgttgcgtggtgcccataattggttggg 259  Q
    |||||||||| || |||||||||||||||||||||    
T  19215872 cattcattgtcgcatggtgcccataattggttggg 19215906  T

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Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 11992087 - 11991854
Alignment:
Q  26 ttgattttgtattgcttggttgtgagtataaattgttgttt-catgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaat 124  Q
    ||||||||||||||||||| ||||||||||| | ||||||| |||| ||| |||| |  |||||||||||||||| |||| | |||| ||||||||||||    
T  11992087 ttgattttgtattgcttggctgtgagtataattcgttgttttcatgtctgaattgcg--gtcttgcatattttgtaagtccgagttattgtcggtgtaat 11991990  T
Q  125 caatgtctctagcaggtggtt-aagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcat 223  Q
    |  |||||||||||||||||| |||||| |||||||||| |||| ||| |||||||||||  ||||||||||||||||||||  || |||||||| ||||    
T  11991989 ccgtgtctctagcaggtggtttaagacaatgattaatttggtcgaatactcattgtgagtgatctattttgtggagttaataaccatgtgtcgcaagcat 11991890  T
Q  224 acattcattgttgcgtggtgcccataattggttggg 259  Q
     |||||||||| || |||||||||||||||||||||    
T  11991889 gcattcattgtcgcatggtgcccataattggttggg 11991854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 259
Target Start/End: Complemental strand, 58907 - 58693
Alignment:
Q  30 ttttgtattgcttggttgtgagtataaattgttgttt-catgcctggattgagaggtcttgcatattttgttagtcagcgttactgtcggtgtaatcaat 128  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||| || |||| |  |||||||||||||||| ||||            |||| ||||  |    
T  58907 ttttgtattgcttggttgtgaatataacttgttgttttcatgcatgaattgtg--gtcttgcatattttgtaagtc------------ggtgcaatctgt 58822  T
Q  129 gtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacatt 228  Q
    |||||||||||||||||||||   |||||||||||||||| || ||||| ||||  || | ||||||||| ||||||  ||| |||||||||||||||||    
T  58821 gtctctagcaggtggttaagaa--tgattaatttagtcggttactcattatgagaggtgttttttgtggaattaataaccagctgtcgcatgcatacatt 58724  T
Q  229 cattgttgcgtggtgcccataattggttggg 259  Q
    |||||| ||||||||||||||||||||||||    
T  58723 cattgtcgcgtggtgcccataattggttggg 58693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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