View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9226_low_36 (Length: 244)
Name: NF9226_low_36
Description: NF9226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9226_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 27684106 - 27684210
Alignment:
| Q |
14 |
cacagaaacagaatgataagatatgtgtgtattataactattattcattgtaattgatgaacatagaagctatacaatgaaaaatattacaattccagag |
113 |
Q |
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| T |
27684106 |
cacagaaacagaatgataagatatgtgtgtattataactatt---cattgtaaatgatgaacatagaagctatacaatgaaaaatattacaattccagag |
27684202 |
T |
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| Q |
114 |
tcagagac |
121 |
Q |
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|||||||| |
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| T |
27684203 |
tcagagac |
27684210 |
T |
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