View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9228_low_10 (Length: 259)

Name: NF9228_low_10
Description: NF9228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9228_low_10
NF9228_low_10
[»] chr1 (50 HSPs)
chr1 (1-242)||(6102115-6102359)
chr1 (56-137)||(2295165-2295247)
chr1 (68-163)||(38001639-38001734)
chr1 (63-173)||(47498766-47498876)
chr1 (63-137)||(49938816-49938891)
chr1 (63-149)||(1432572-1432659)
chr1 (63-173)||(6292526-6292636)
chr1 (67-173)||(36514606-36514713)
chr1 (63-172)||(11941296-11941406)
chr1 (71-177)||(4768763-4768870)
chr1 (56-120)||(33204313-33204377)
chr1 (120-176)||(35669002-35669057)
chr1 (91-200)||(45975693-45975806)
chr1 (99-173)||(51929501-51929576)
chr1 (92-177)||(27820152-27820237)
chr1 (58-173)||(38115998-38116115)
chr1 (89-173)||(38480526-38480612)
chr1 (109-173)||(10199381-10199445)
chr1 (63-167)||(14576580-14576685)
chr1 (57-149)||(15943017-15943110)
chr1 (120-173)||(38503449-38503502)
chr1 (62-110)||(46504143-46504192)
chr1 (141-204)||(14629971-14630037)
chr1 (69-136)||(38247397-38247465)
chr1 (63-134)||(50644181-50644253)
chr1 (63-173)||(3233941-3234052)
chr1 (63-173)||(3887558-3887669)
chr1 (63-137)||(5720994-5721069)
chr1 (83-133)||(34795392-34795443)
chr1 (64-173)||(37593611-37593721)
chr1 (63-133)||(37617391-37617462)
chr1 (120-171)||(37811887-37811937)
chr1 (79-177)||(38018306-38018405)
chr1 (63-164)||(27146181-27146283)
chr1 (143-204)||(34290235-34290299)
chr1 (120-174)||(35925722-35925775)
chr1 (98-163)||(38170652-38170717)
chr1 (72-129)||(39658444-39658502)
chr1 (65-146)||(39976138-39976220)
chr1 (89-173)||(27145688-27145772)
chr1 (120-173)||(31118076-31118128)
chr1 (69-137)||(43990326-43990395)
chr1 (63-95)||(2522708-2522740)
chr1 (107-166)||(4549888-4549947)
chr1 (63-95)||(30259412-30259444)
chr1 (125-173)||(30815643-30815690)
chr1 (98-173)||(31517702-31517777)
chr1 (141-173)||(32859951-32859983)
chr1 (129-173)||(44815297-44815340)
chr1 (98-177)||(51695456-51695536)
[»] chr3 (37 HSPs)
chr3 (63-203)||(21367667-21367811)
chr3 (63-167)||(24085264-24085369)
chr3 (63-177)||(31365235-31365350)
chr3 (64-164)||(402469-402570)
chr3 (62-203)||(39602136-39602280)
chr3 (63-175)||(31365114-31365227)
chr3 (68-168)||(46778122-46778223)
chr3 (69-204)||(46886624-46886763)
chr3 (56-167)||(26878239-26878351)
chr3 (66-173)||(34610735-34610843)
chr3 (71-173)||(30443926-30444029)
chr3 (63-204)||(25447171-25447315)
chr3 (63-137)||(20257605-20257681)
chr3 (64-137)||(3776317-3776392)
chr3 (56-164)||(33046717-33046829)
chr3 (63-139)||(22892-22969)
chr3 (63-172)||(26911619-26911735)
chr3 (63-144)||(26990151-26990232)
chr3 (95-135)||(34637943-34637984)
chr3 (63-167)||(46031029-46031134)
chr3 (63-134)||(584118-584190)
chr3 (70-137)||(22203499-22203566)
chr3 (63-149)||(5436129-5436216)
chr3 (63-173)||(20880509-20880620)
chr3 (63-137)||(39980798-39980873)
chr3 (99-173)||(50952366-50952440)
chr3 (56-165)||(9832674-9832784)
chr3 (96-177)||(26878146-26878228)
chr3 (64-167)||(42747709-42747814)
chr3 (99-174)||(23808027-23808102)
chr3 (55-87)||(28779439-28779471)
chr3 (63-173)||(32582777-32582881)
chr3 (100-202)||(37273135-37273240)
chr3 (98-173)||(43115089-43115164)
chr3 (63-137)||(44014724-44014800)
chr3 (141-173)||(45432944-45432976)
chr3 (141-173)||(45555009-45555041)
[»] chr5 (45 HSPs)
chr5 (63-201)||(39594809-39594951)
chr5 (56-204)||(7984968-7985120)
chr5 (68-149)||(10640010-10640092)
chr5 (64-204)||(12425570-12425716)
chr5 (63-168)||(41419357-41419463)
chr5 (63-204)||(39105463-39105609)
chr5 (63-145)||(11064727-11064810)
chr5 (51-167)||(1464934-1465051)
chr5 (63-202)||(9202674-9202817)
chr5 (63-134)||(9107162-9107234)
chr5 (63-168)||(41534479-41534582)
chr5 (63-167)||(16937809-16937914)
chr5 (68-173)||(11700196-11700301)
chr5 (71-120)||(19460260-19460309)
chr5 (107-174)||(499702-499769)
chr5 (64-167)||(40426804-40426908)
chr5 (120-167)||(4625767-4625814)
chr5 (63-177)||(6096576-6096691)
chr5 (68-173)||(42100344-42100450)
chr5 (56-157)||(42583261-42583363)
chr5 (124-177)||(1899183-1899235)
chr5 (120-173)||(8334604-8334657)
chr5 (73-173)||(19460323-19460423)
chr5 (96-167)||(16457938-16458010)
chr5 (98-173)||(17258845-17258920)
chr5 (90-165)||(42228080-42228156)
chr5 (63-177)||(7674677-7674791)
chr5 (63-137)||(7705924-7705999)
chr5 (101-167)||(7808544-7808611)
chr5 (99-173)||(9106854-9106929)
chr5 (63-149)||(12433099-12433186)
chr5 (89-159)||(39248146-39248216)
chr5 (120-174)||(2880532-2880585)
chr5 (96-173)||(29925874-29925952)
chr5 (73-149)||(31038341-31038418)
chr5 (73-149)||(31047565-31047642)
chr5 (120-157)||(39983679-39983716)
chr5 (79-150)||(41981645-41981715)
chr5 (62-137)||(3520646-3520722)
chr5 (141-203)||(14182386-14182450)
chr5 (68-120)||(15015930-15015982)
chr5 (145-173)||(19138726-19138754)
chr5 (68-135)||(35445775-35445843)
chr5 (98-173)||(37611177-37611252)
chr5 (98-173)||(37787907-37787982)
[»] chr8 (38 HSPs)
chr8 (67-204)||(27028830-27028971)
chr8 (62-172)||(32840911-32841022)
chr8 (63-173)||(6950355-6950466)
chr8 (63-173)||(33808336-33808446)
chr8 (125-173)||(3536934-3536982)
chr8 (67-138)||(42893420-42893492)
chr8 (79-203)||(1930035-1930163)
chr8 (69-137)||(26771334-26771403)
chr8 (63-203)||(30251380-30251524)
chr8 (96-173)||(29168016-29168094)
chr8 (68-173)||(31716158-31716264)
chr8 (107-173)||(42215277-42215343)
chr8 (68-173)||(1058008-1058113)
chr8 (56-113)||(1892143-1892201)
chr8 (63-167)||(14280347-14280453)
chr8 (56-137)||(35534532-35534614)
chr8 (108-173)||(41606875-41606940)
chr8 (63-120)||(36963280-36963337)
chr8 (63-120)||(38602414-38602471)
chr8 (63-119)||(1096578-1096634)
chr8 (67-178)||(27492965-27493077)
chr8 (68-174)||(30191072-30191179)
chr8 (63-137)||(38648420-38648495)
chr8 (69-139)||(38750424-38750495)
chr8 (90-139)||(6881994-6882044)
chr8 (56-94)||(7008711-7008749)
chr8 (90-135)||(28763439-28763485)
chr8 (120-173)||(10383918-10383970)
chr8 (62-177)||(11376732-11376848)
chr8 (120-173)||(13459678-13459730)
chr8 (66-111)||(30657706-30657751)
chr8 (98-173)||(30918146-30918220)
chr8 (73-149)||(42043291-42043368)
chr8 (63-137)||(16162828-16162904)
chr8 (63-107)||(16915833-16915877)
chr8 (125-173)||(31751546-31751594)
chr8 (63-130)||(43717860-43717928)
chr8 (141-173)||(44401594-44401626)
[»] chr4 (45 HSPs)
chr4 (63-173)||(52315123-52315234)
chr4 (69-177)||(21731588-21731697)
chr4 (64-167)||(25904150-25904254)
chr4 (67-204)||(17822795-17822936)
chr4 (56-166)||(49939870-49939981)
chr4 (63-174)||(1374502-1374614)
chr4 (63-137)||(7367980-7368056)
chr4 (63-177)||(41336789-41336904)
chr4 (63-137)||(54426112-54426187)
chr4 (64-137)||(29657453-29657527)
chr4 (63-148)||(55437134-55437220)
chr4 (63-173)||(24169296-24169407)
chr4 (63-165)||(27043756-27043859)
chr4 (63-204)||(35571557-35571702)
chr4 (63-137)||(39011054-39011129)
chr4 (72-149)||(1706679-1706757)
chr4 (56-118)||(39691068-39691130)
chr4 (63-159)||(15173229-15173326)
chr4 (120-173)||(24929526-24929578)
chr4 (63-167)||(25571299-25571403)
chr4 (125-170)||(29263406-29263450)
chr4 (140-204)||(679254-679318)
chr4 (98-173)||(1137745-1137820)
chr4 (63-173)||(6987667-6987778)
chr4 (90-173)||(13126529-13126613)
chr4 (63-157)||(28615384-28615478)
chr4 (63-130)||(40174633-40174701)
chr4 (141-204)||(7694015-7694081)
chr4 (63-137)||(21043162-21043237)
chr4 (63-137)||(22030272-22030347)
chr4 (91-173)||(25332808-25332891)
chr4 (89-167)||(49202684-49202763)
chr4 (63-171)||(19304961-19305070)
chr4 (120-173)||(20936214-20936266)
chr4 (141-174)||(35064887-35064920)
chr4 (63-174)||(37575862-37575974)
chr4 (55-88)||(40613290-40613323)
chr4 (98-170)||(50799992-50800064)
chr4 (76-163)||(20719746-20719834)
chr4 (90-173)||(21523591-21523674)
chr4 (64-120)||(29388701-29388757)
chr4 (66-137)||(43506004-43506076)
chr4 (141-173)||(43824316-43824348)
chr4 (70-118)||(44862917-44862965)
chr4 (58-149)||(49003796-49003888)
[»] chr7 (29 HSPs)
chr7 (56-173)||(19302482-19302600)
chr7 (90-173)||(20526882-20526966)
chr7 (63-204)||(20526445-20526590)
chr7 (63-203)||(48470044-48470188)
chr7 (56-167)||(34035956-34036068)
chr7 (79-173)||(19022527-19022622)
chr7 (79-173)||(19214348-19214443)
chr7 (79-204)||(33678779-33678908)
chr7 (55-138)||(22296146-22296231)
chr7 (89-173)||(21568447-21568532)
chr7 (63-120)||(22283572-22283629)
chr7 (65-137)||(25596101-25596174)
chr7 (120-204)||(39967919-39968006)
chr7 (63-203)||(44821959-44822102)
chr7 (61-167)||(25670510-25670617)
chr7 (69-164)||(33601342-33601438)
chr7 (56-204)||(30535562-30535714)
chr7 (63-118)||(33266412-33266467)
chr7 (63-136)||(4970718-4970792)
chr7 (69-173)||(36517612-36517715)
chr7 (68-135)||(46280211-46280282)
chr7 (56-133)||(20234535-20234611)
chr7 (124-173)||(25511659-25511707)
chr7 (98-177)||(28128362-28128436)
chr7 (67-112)||(31744897-31744942)
chr7 (98-174)||(33894659-33894735)
chr7 (63-120)||(45338540-45338597)
chr7 (63-130)||(20526216-20526284)
chr7 (67-173)||(46104497-46104604)
[»] chr6 (23 HSPs)
chr6 (68-173)||(34910340-34910446)
chr6 (79-172)||(31813195-31813289)
chr6 (67-177)||(34404656-34404766)
chr6 (56-137)||(31623619-31623701)
chr6 (69-167)||(2455030-2455126)
chr6 (125-174)||(34939776-34939824)
chr6 (63-174)||(848021-848132)
chr6 (69-167)||(2455298-2455397)
chr6 (99-204)||(2735068-2735177)
chr6 (107-173)||(9912161-9912228)
chr6 (68-173)||(13907618-13907722)
chr6 (67-140)||(26559169-26559244)
chr6 (56-130)||(30641821-30641896)
chr6 (56-173)||(430296-430414)
chr6 (63-136)||(6538584-6538658)
chr6 (56-86)||(7351590-7351620)
chr6 (73-158)||(9559358-9559444)
chr6 (68-137)||(30926588-30926658)
chr6 (63-139)||(21405080-21405157)
chr6 (120-204)||(31624089-31624175)
chr6 (98-202)||(33887831-33887938)
chr6 (62-94)||(2455923-2455955)
chr6 (141-173)||(6536980-6537012)
[»] chr2 (45 HSPs)
chr2 (64-177)||(2142683-2142797)
chr2 (90-203)||(40682348-40682464)
chr2 (68-204)||(29628673-29628814)
chr2 (68-173)||(750703-750809)
chr2 (90-177)||(36534797-36534885)
chr2 (63-146)||(42419853-42419937)
chr2 (67-149)||(449904-449987)
chr2 (107-173)||(28677630-28677696)
chr2 (63-136)||(27317449-27317523)
chr2 (98-197)||(8017440-8017542)
chr2 (62-163)||(5902476-5902576)
chr2 (63-173)||(7928224-7928336)
chr2 (56-120)||(39073621-39073685)
chr2 (101-173)||(40279440-40279512)
chr2 (63-173)||(4606958-4607069)
chr2 (72-167)||(5365514-5365608)
chr2 (63-137)||(23974419-23974494)
chr2 (63-137)||(30331820-30331895)
chr2 (68-137)||(42659142-42659212)
chr2 (99-167)||(16451157-16451226)
chr2 (63-201)||(26143568-26143708)
chr2 (124-204)||(29316764-29316846)
chr2 (71-197)||(3611232-3611362)
chr2 (98-173)||(12313135-12313210)
chr2 (56-146)||(2416373-2416464)
chr2 (56-95)||(6561449-6561488)
chr2 (111-200)||(26626876-26626969)
chr2 (63-169)||(41812018-41812125)
chr2 (63-136)||(10619146-10619220)
chr2 (98-174)||(787364-787440)
chr2 (120-173)||(1647269-1647321)
chr2 (142-210)||(3235390-3235461)
chr2 (71-167)||(19608567-19608664)
chr2 (120-173)||(35379001-35379053)
chr2 (120-173)||(40279300-40279353)
chr2 (120-173)||(40279370-40279423)
chr2 (120-173)||(41817201-41817253)
chr2 (120-173)||(43065435-43065487)
chr2 (98-137)||(1801736-1801776)
chr2 (90-173)||(7035520-7035604)
chr2 (120-172)||(33256774-33256825)
chr2 (58-94)||(35809980-35810016)
chr2 (98-173)||(40158751-40158826)
chr2 (141-173)||(42420030-42420062)
chr2 (122-170)||(44438826-44438873)
[»] scaffold0057 (1 HSPs)
scaffold0057 (69-146)||(24681-24759)
[»] scaffold0528 (1 HSPs)
scaffold0528 (73-149)||(918-995)
[»] scaffold0110 (1 HSPs)
scaffold0110 (56-117)||(33832-33893)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6102359 - 6102115
Alignment:
Q  1 aaaaggacacaacctacagcatcacaagagtaaaccttgcattcatttatgaaattgtttaaattgacttatttgagtttatctaccggcataaattttg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6102359 aaaaagacacaacctacagcatcacaagagtaaaccttgcattcatttatgaaattgtttaaattgacttatttgagtttatctaccggcataaattttg 6102260  T
Q  101 tgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaacag 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||    
T  6102259 tgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattctcccagatagcttatgaaaacag 6102160  T
Q  198 cttatagtgtataagtgtatacaaaaacaatctaacttcactttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6102159 cttatagtgtataagtgtatacaaaaacaatctaacttcactttt 6102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 2295247 - 2295165
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||| ||||| |||||||||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  2295247 tgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatga 2295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 38001734 - 38001639
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagctt 163  Q
    |||||||||||||||| || | ||||| |||||||||| ||||||||||||| ||||||||||||||||||   ||||||||| |||||||||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatga-cctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 47498766 - 47498876
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||| ||| |||| ||  ||| ||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  47498766 attgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagc 47498864  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  47498865 ttattttcataa 47498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 49938891 - 49938816
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||||||||||||||||| |   ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  49938891 attgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatga 49938816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 1432659 - 1432572
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    |||| |||||||||| ||||| |||| |||||||||||||||| ||||||| ||||| |||||||| ||| ||||| |||||||||||    
T  1432659 attggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataa 1432572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 6292636 - 6292526
Alignment:
Q  63 attgacttatttgagtttatctaccggcataa--attttgtgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    ||||||||||||||| |||||||| | |||||  | ||| |||||||||||||||||| | | |||||||||||||| | |||||||||  |||||||||    
T  6292636 attgacttatttgagcttatctactgacataagcacttt-tgagattgtttgggagaatttttaaaacagcttatgaca-tgttcataagctgttttcag 6292539  T
Q  161 cttatttccataa 173  Q
    ||||||| |||||    
T  6292538 cttattttcataa 6292526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 36514606 - 36514713
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    |||||||||||||||||||| | ||||| |||| ||||| |||| |||||||| |||||||| | ||||||| |||||| | ||  |||||||||||| |    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctttt 36514705  T
Q  166 ttccataa 173  Q
    || |||||    
T  36514706 tttcataa 36514713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 11941406 - 11941296
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||  || |||||  |||||  || ||||||| ||||||||||| || ||||||| ||||||| | |||||||||||  ||||||||||    
T  11941406 attgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagc 11941307  T
Q  162 ttatttccata 172  Q
    |||||| ||||    
T  11941306 ttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 4768763 - 4768870
Alignment:
Q  71 atttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttc 168  Q
    ||||||||||||| || ||||||||   ||||||||  |||||||| |||| | |||||||||||| || || || ||||| ||||||||||||||||||    
T  4768763 atttgagtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttacgacat-gtccataacttgttttcagcttatttc 4768861  T
Q  169 cataaattc 177  Q
    |||||||||    
T  4768862 cataaattc 4768870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 33204313 - 33204377
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||||| || |||||||||||| |||||||| | ||||| |||||||||| ||||||||||||||    
T  33204313 tgtttagatcgacttatttgagcttatctactgacataagttttgtgagactgtttgggagaact 33204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 35669057 - 35669002
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt 176  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  35669057 tatgaaagcagcttatgatat-gtccataaattgttttcaacttatttccataaatt 35669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 45975806 - 45975693
Alignment:
Q  91 ataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagct 186  Q
    ||||||||| ||||| ||||  ||||||| |||||||||||  ||| | ||| |||||||  |||||||||||||||| ||||||||   | ||||||||    
T  45975806 ataaattttctgagactgttcaggagaacatatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctccaagatagct 45975707  T
Q  187 tgtgaaaacagctt 200  Q
    | ||||||||||||    
T  45975706 tatgaaaacagctt 45975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 51929501 - 51929576
Alignment:
Q  99 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||||| | ||||||||||||||||| | | |||||||  | |||||| |||||||||||||    
T  51929501 tgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataa 51929576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 27820152 - 27820237
Alignment:
Q  92 taaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||||||||| ||||| |||||| | ||||||| ||||||| | |||||||||||  | |||||||||||||| |||||||||    
T  27820152 taaattttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaattc 27820237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 38115998 - 38116115
Alignment:
Q  58 tttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggag--aactatgaaaacagcttatgatattgttcataaattgtt 155  Q
    |||| ||||||||||||||| |||||||| | | ||| ||||||||||  |||| ||||  || || ||||| ||||||||| ||||||| ||| |||||    
T  38115998 tttagattgacttatttgagcttatctactgacgtaagttttgtgagacggttttggagaaaaataagaaaatagcttatgacattgttcctaagttgtt 38116097  T
Q  156 ttcagcttatttccataa 173  Q
    | ||||||| || |||||    
T  38116098 tccagcttactttcataa 38116115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 173
Target Start/End: Original strand, 38480526 - 38480612
Alignment:
Q  89 gcataaattttgtgagattgtttgggagaact-atg-aaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||| |||||||||| | |||||||||||| ||| |||| ||||||||| |||| ||||||| |||||| ||||||||| |||||    
T  38480526 gcataagttttgtgagactatttgggagaactaatgaaaaatagcttatgacattgctcataaactgtttttagcttattttcataa 38480612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 10199381 - 10199445
Alignment:
Q  109 tttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||| ||||||| ||||||||| || |||||||| ||||||||||||||||| |||||    
T  10199381 tttgggagaactcatgaaaatagcttatgacat-gttcataagttgttttcagcttattttcataa 10199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 14576580 - 14576685
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||| ||| |||||||||||  | ||||||||| ||| | |||||||||||||||| | | |||| ||  | ||||||||    
T  14576580 attggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagcttttttcagc 14576679  T
Q  162 ttattt 167  Q
    ||||||    
T  14576680 ttattt 14576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 15943110 - 15943017
Alignment:
Q  57 gtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    |||| |||| |||||||||||||||| ||  |||||||| ||||||||| ||||| ||||||| |||  ||||| || |||| |||||||||||    
T  15943110 gtttgaatttacttatttgagtttatatattggcataaactttgtgagactgtttaggagaacatatagaaacaactgatgacattgttcataa 15943017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 38503449 - 38503502
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||| ||||||| ||||| ||||||||||| ||||||||||||||||| |||||    
T  38503449 tatggaaacagcctatgacattgttcataagttgttttcagcttattttcataa 38503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 46504143 - 46504192
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaat-tttgtgagattgtt 110  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  46504143 aattgacttatttgagtttatctaccggcataagtatttgtgagactgtt 46504192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 14629971 - 14630037
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataaa---ttccagatagcttgtgaaaacagcttatag 204  Q
    ||||||||| ||||||||||||||||||||||||   | | ||||||||| |||||| |||||||||    
T  14629971 tgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatag 14630037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 38247465 - 38247397
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 136  Q
    ||||||||  |||||||| ||||||| |||||||  | ||||||||||||| |||||||||||||||||    
T  38247465 ttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 50644181 - 50644253
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagctta 134  Q
    ||||||||||||||| ||||||||   ||||  |||||||||| ||||||||||||| |||||||||| ||||    
T  50644181 attgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 3233941 - 3234052
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| |||||||  | | ||| |||||||||| |||| |||||||| |||||||||| ||||| | | | ||||||| || |||||  |    
T  3233941 attgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctac 3234040  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  3234041 ttattttcataa 3234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 3887558 - 3887669
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| ||  |||  || |||| |||||| ||  ||||||| |||||| ||||||||| ||||||| |||||||||||  |||||| | |    
T  3887558 attgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctgtttttaac 3887657  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  3887658 ttattttcataa 3887669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 5721069 - 5720994
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| |||||||||| ||| ||||  |||||| ||||||  || ||||||||||||| ||||||||||||||||||    
T  5721069 attggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatga 5720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 34795392 - 34795443
Alignment:
Q  83 ctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagctt 133  Q
    |||| ||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  34795392 ctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 37593611 - 37593721
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||| |||| ||| ||||||||   |||| ||| ||||||||| ||||| |||| ||| ||||||| || ||||||||  ||||||||||    
T  37593611 ttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacat-gttcataagctgttttcagc 37593709  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  37593710 ttattttcataa 37593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 37617391 - 37617462
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagctt 133  Q
    |||||||||||||||||||||||  | | ||| |||||||||| |||||| |||||  ||||||||||||||    
T  37617391 attgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 37811937 - 37811887
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccat 171  Q
    |||||||||||||||||| || ||||||||| |||||||| |||||||||||    
T  37811937 tatgaaaacagcttatgacat-gttcataaactgttttcaacttatttccat 37811887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 38018306 - 38018405
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||| ||||||| |||||||||| || |||||| |||| |||||| ||| ||| || ||||||||| |  | |||||||||||||| ||| |||||    
T  38018306 ttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaattc 38018405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 27146181 - 27146283
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||| ||||||| |||||||  ||||||| |||||||||| |  |||| |||||| | | ||||| ||||||| |||||||||||  |||||||| |    
T  27146181 attgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgttttcaac 27146280  T
Q  162 tta 164  Q
    |||    
T  27146281 tta 27146283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 34290299 - 34290235
Alignment:
Q  143 ttcataaattgttttcagcttatttccataa---attccagatagcttgtgaaaacagcttatag 204  Q
    ||||||| ||||||||||||||||| |||||    ||| ||||||||| ||||||||||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatag 34290235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 35925775 - 35925722
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||||||||||||||||| || ||||||||  |||||||| ||||||||||||||    
T  35925775 tatgaaaacagcttatgacat-gttcataagctgttttcaacttatttccataaa 35925722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 38170652 - 38170717
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctt 163  Q
    |||||||| || |||||||| || ||||||||||||||||| || |||||||| |||||||||||||    
T  38170652 ttgtgagactgcttgggagagcttatgaaaacagcttatgacat-gttcataagttgttttcagctt 38170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 39658444 - 39658502
Alignment:
Q  72 tttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaaca 129  Q
    |||||| ||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||    
T  39658444 tttgagcttatccaccgacataagttttgtgagattgattgggagaactcatgaaaaca 39658502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 39976138 - 39976220
Alignment:
Q  65 tgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 146  Q
    ||||||||||||| |||||||| | ||||| |||||||| | |||||| |||||| |||||||| |  |||||| ||||||||    
T  39976138 tgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgacattgttca 39976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 173
Target Start/End: Original strand, 27145688 - 27145772
Alignment:
Q  89 gcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||| |||||||||| | ||||| |||||| | ||||||  ||||||| ||||||||||| || |||||||||||||| |||||    
T  27145688 gcataagttttgtgagactttttggaagaacttaagaaaacgacttatgacattgttcataagtt-ttttcagcttattttcataa 27145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 31118128 - 31118076
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||| || |||||| | |||||||||||||||||||||||    
T  31118128 tatgaaaacatcttatgacat-gttcatcagttgttttcagcttatttccataa 31118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 43990395 - 43990326
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||||||||| |||||| |  ||||||||||||||  | ||||||||||| | ||||||||||||||||    
T  43990395 ttatttgagttcatctactgatataaattttgtgaggctatttgggagaacgtttgaaaacagcttatga 43990326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 2522740 - 2522708
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa 95  Q
    |||||||||||||||||||||||| ||||||||    
T  2522740 attgacttatttgagtttatctactggcataaa 2522708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 4549947 - 4549888
Alignment:
Q  107 tgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    ||||||||||||||  ||||||||| |||||| || |||||||| ||||||||||||||||    
T  4549947 tgtttgggagaacttctgaaaacagattatgacat-gttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 30259412 - 30259444
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa 95  Q
    ||||||||||||||||||| |||||||||||||    
T  30259412 attgacttatttgagtttacctaccggcataaa 30259444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 30815643 - 30815690
Alignment:
Q  125 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||| || ||||||||| |||||||||||||||| |||||    
T  30815643 aaacagcttatgacat-gttcataaaatgttttcagcttattttcataa 30815690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 31517702 - 31517777
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| |||||||||||||| || |||||| || |||| || ||||||||  |||||||||||||||| |||||    
T  31517702 ttgtgagactgtttgggagaacttatcaaaacaactcatgacat-gttcataagctgttttcagcttattttcataa 31517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 32859951 - 32859983
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||||||||||||| |||||||||    
T  32859951 tgttcataaattgttttcagcttgtttccataa 32859983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 44815297 - 44815340
Alignment:
Q  129 agcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  44815297 agcttatgatat-gtgtataaattgttttcagcttatttccataa 44815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 51695456 - 51695536
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||| ||||||| |||||| ||  ||||| ||||| | |||||||||||  | |||||||||||||| |||||||||    
T  51695456 ttgtgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattc 51695536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 21367811 - 21367667
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| ||||||||| |||||| ||||||| || |||||||||||||| ||||||||||||||||| |||||||| ||  ||||||||||    
T  21367811 attggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagc 21367712  T
Q  162 ttatttccataaatt---ccagatagcttgtgaaaacagcttata 203  Q
    |||||| ||||| ||   | ||||||||| |||||||| ||||||    
T  21367711 ttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 24085264 - 24085369
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||||||||||| |||||||||| || || ||||||| ||||||||||||||||| || ||||||||   ||||||||||    
T  24085264 attggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagc 24085363  T
Q  162 ttattt 167  Q
    ||||||    
T  24085364 ttattt 24085369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 31365235 - 31365350
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| ||||||||||||||||||  ||||||| |||||||| | ||||||||||||| |||||| ||||||||||| | | |||||||||  |||||| |    
T  31365235 attggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttcaac 31365334  T
Q  162 ttatttccataaattc 177  Q
    | |||| |||||||||    
T  31365335 tcattttcataaattc 31365350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 164
Target Start/End: Original strand, 402469 - 402570
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 162  Q
    ||||| |||||||||||||| ||   ||||| |||||  ||| ||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||    
T  402469 ttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagct 402568  T
Q  163 ta 164  Q
    ||    
T  402569 ta 402570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 39602136 - 39602280
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    ||||| |||||||||| ||| |||| ||||| | |||||||||  | ||||| ||| || ||||| ||||||||||| || ||||||||||||||||||     
T  39602136 aattggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgacat-gttcataaattgttttcaa 39602234  T
Q  161 cttatttccataaattc---cagatagcttgtgaaaacagcttata 203  Q
    ||||||| ||||| |||    ||||||||| |||||||||||||||    
T  39602235 cttattttcataagttctcaaagatagcttatgaaaacagcttata 39602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 31365114 - 31365227
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||  ||||||| |||||||||| ||||||||||||| ||||||| |||||||||| | | |||||||  | |||||| |    
T  31365114 attggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttcaac 31365213  T
Q  162 ttatttccataaat 175  Q
    | |||| |||||||    
T  31365214 tcattttcataaat 31365227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 46778122 - 46778223
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    |||||||||| |||| ||  |||||||||||||||| |  |||||||||||| |||||||||| ||||||| ||| ||||||| || | |||||||||||    
T  46778122 cttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagcttatt 46778221  T
Q  167 tc 168  Q
    ||    
T  46778222 tc 46778223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 46886624 - 46886763
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    ||||||||| |||||| | ||||||||||||| |||| |||||||| || || ||||||||||||||||  ||||||| ||| || | ||||| ||||||    
T  46886624 ttatttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatggcattgttcgtaagttatgttcaggttattt 46886723  T
Q  168 ccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
     || || ||   | ||||||||| ||||||||||||||||    
T  46886724 tcaaaagttctccaagatagcttatgaaaacagcttatag 46886763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 26878351 - 26878239
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgt 154  Q
    ||||| ||||| |||||| ||| |||||||| | ||||| ||  |||| | |||||| |||||||  |||||| ||||||||| |||||||||||| |||    
T  26878351 tgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactgt 26878252  T
Q  155 tttcagcttattt 167  Q
    |||||||||||||    
T  26878251 tttcagcttattt 26878239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 34610735 - 34610843
Alignment:
Q  66 gacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctta 164  Q
    |||||||||||| |||||||| | ||||| ||||||   | | |||||||||||| |||||||| |||||||| ||||||||||| | |||||||||| |    
T  34610735 gacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctga 34610834  T
Q  165 tttccataa 173  Q
    ||| |||||    
T  34610835 ttttcataa 34610843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 30444029 - 30443926
Alignment:
Q  71 atttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttcc 169  Q
    ||||||| |||||||| ||||||||||| |||||| ||||||| ||| | |||||||||||||||||| | | |||| ||  | |||||||||||||| |    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  170 ataa 173  Q
    ||||    
T  30443929 ataa 30443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 25447171 - 25447315
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||||||||||||| | ||||| |||||||||| ||||||  ||||| || | || ||| |||||  |||||||| ||  ||||||||||    
T  25447171 attgacttatttgagtttatctactgacataagttttgtgagactgtttgcaagaacatacggaagcagtttatgccattgttcacaagctgttttcagc 25447270  T
Q  162 ttatttccata--aattccagatagcttgtgaaaacagcttatag 204  Q
    || ||  ||||  || || ||||||||| ||||||||| ||||||    
T  25447271 tttttctcataagaaatcaagatagcttatgaaaacagtttatag 25447315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 20257681 - 20257605
Alignment:
Q  63 attgacttatttgagttt-atctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| ||||||||||||| |||||| | |||||||||||||||| ||||||||||||| ||||||| ||||| ||||    
T  20257681 attggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatga 20257605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 3776317 - 3776392
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaat-tttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||||| ||||||||||||||| ||||||| |  |||||||| |||||| |||||| ||||||||||||||||||    
T  3776317 ttgacttgtttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaacagcttatga 3776392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 33046717 - 33046829
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgt---gagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaat 151  Q
    ||||| ||||| ||||||| ||||||||||| ||||||| ||||||   |||| |||||||||| || || |||||||  || ||| |||| |||||| |    
T  33046717 tgtttgaattggcttattttagtttatctactggcataagttttgttgcgagactgtttgggaggacttacgaaaacaatttctgacattggtcataagt 33046816  T
Q  152 tgttttcagctta 164  Q
    |||||||||||||    
T  33046817 tgttttcagctta 33046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 22892 - 22969
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgata 139  Q
    |||| |||||||||  || ||||| ||||||| |||||||||||||||| ||||||  ||||||||||||||| ||||    
T  22892 attggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagcttacgata 22969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 26911735 - 26911619
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaatttt------gtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgtt 155  Q
    |||||||||||||||||||||||| | ||||| ||||      ||||||  |||||||| ||  |||||||||||||||||| | | ||||||| || ||    
T  26911735 attgacttatttgagtttatctactgacataagtttttgttttgtgagaccgtttgggataatatatgaaaacagcttatgacaattttcataagttttt 26911636  T
Q  156 ttcagcttatttccata 172  Q
    |||| ||||||||||||    
T  26911635 ttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 26990151 - 26990232
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagcttatgatattgtt 144  Q
    ||||||||||||||| |||||||| | ||||   |||| || |||||||||||||||||  |||||||| ||||||| ||||    
T  26990151 attgacttatttgagcttatctactgacataggctttgcgatattgtttgggagaactaataaaacagcatatgatactgtt 26990232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 34637943 - 34637984
Alignment:
Q  95 attttgtgagattgtttgggagaac-tatgaaaacagcttat 135  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  34637943 attttgtgagattgtttgggagaacttatgaaaacagcttat 34637984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 46031134 - 46031029
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| ||||||||||||||||||  |  |||| |||| ||||| |||||  ||||||| | ||||||||| ||||| ||| |||||||  ||||||||||    
T  46031134 attggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagc 46031035  T
Q  162 ttattt 167  Q
    ||||||    
T  46031034 ttattt 46031029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 584190 - 584118
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagctta 134  Q
    ||||||||||||||| ||||||||  |||||| || ||||||| ||||| ||||||  |||||||||||||||    
T  584190 attgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagctta 584118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 22203566 - 22203499
Alignment:
Q  70 tatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| ||| |||||||||| ||| |||||||||||| ||||| ||||||| ||||||||||||||||||    
T  22203566 tattcgagcttatctaccgacattaattttgtgagactgttt-ggagaacttatgaaaacagcttatga 22203499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 5436216 - 5436129
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    |||| |||||||||||||||| || | ||||| |||||||| | ||||| | ||||| | |||||||| ||||||| |||||||||||    
T  5436216 attggcttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttatgacattgttcataa 5436129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 20880620 - 20880509
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| ||||||||  |||||| |||  | ||| | ||||||||||| |||||||||||||||||| | | |||||||  | |||| |||    
T  20880620 attggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagc 20880521  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  20880520 ttattttcataa 20880509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 39980873 - 39980798
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatga 137  Q
    |||| ||| |||||| ||||||||  |||||| |||||||||| |||||  ||||||| |||||||||||||||||    
T  39980873 attggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatga 39980798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 50952440 - 50952366
Alignment:
Q  99 tgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||| |||| | |||||| || ||||||||||||||| || ||||||||| |||||| |||||||||||||||    
T  50952440 tgtgagactgttcgagagaacgtacgaaaacagcttatgacat-gttcataaactgttttaagcttatttccataa 50952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 9832674 - 9832784
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgt 154  Q
    |||||| ||||||||||||||| |||| ||  | ||||| |||||| | | ||||||||||||| | |||||||||||||||   || |||||||| | |    
T  9832674 tgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttt 9832773  T
Q  155 tttcagcttat 165  Q
    ||||| |||||    
T  9832774 tttcaacttat 9832784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 26878228 - 26878146
Alignment:
Q  96 ttttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||||| |||||||||||| |  |||||| || | |||| |||||||||||| |||||||||| ||||| ||| |||||    
T  26878228 ttttgtgagactgtttgggagaatttgtgaaaatagttaatgacattgttcataaactgttttcagcatattttcattaattc 26878146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 42747709 - 42747814
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagc-ttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||||||||||||   ||||| | |||||||| |||||  |||||| |||||||||| | |||||| |||||| ||||  |||||||  |    
T  42747709 ttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactttatgacattgtttataagctgttttctcc 42747808  T
Q  162 ttattt 167  Q
    ||||||    
T  42747809 ttattt 42747814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 23808027 - 23808102
Alignment:
Q  99 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||||||  |||||||| |||| |||||| |||||||||| || ||||| |||||||||||| ||||||| ||||||    
T  23808027 tgtgagacggtttgggaaaacttatgaaagcagcttatgacat-gttcacaaattgttttcatcttattttcataaa 23808102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 28779471 - 28779439
Alignment:
Q  55 ttgtttaaattgacttatttgagtttatctacc 87  Q
    |||||| ||||||||||||||||||||||||||    
T  28779471 ttgtttgaattgacttatttgagtttatctacc 28779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 32582881 - 32582777
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||||||||||||   ||||| ||||   ||| |||||||||||||| ||||||||||    ||| |||||||| ||  | |||||| |    
T  32582881 attgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacattgttcaaaagattttttcaac 32582789  T
Q  162 ttatttccataa 173  Q
    ||||||||||||    
T  32582788 ttatttccataa 32582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 37273240 - 37273135
Alignment:
Q  100 gtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaac 195  Q
    |||||| ||||||||||| || ||| ||||| ||||||| || || ||||| ||||||||| ||||||||||||| ||   | ||||||||| |||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacat-gtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaac 37273142  T
Q  196 agcttat 202  Q
    || ||||    
T  37273141 agtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 43115164 - 43115089
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||| |||  | ||| ||||| ||||||| || || ||||| |||||||||||||||||||||||    
T  43115164 ttgtgagattgtttggaagagtttatggaaacaacttatgacat-gtccataacttgttttcagcttatttccataa 43115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 44014724 - 44014800
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| |||||||||||||||||||  |||||||   |||||||| |||||| || ||| ||||||||||||||||||    
T  44014724 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatga 44014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 45432944 - 45432976
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||| |||||||||||||||||||||||    
T  45432944 tgttcataagttgttttcagcttatttccataa 45432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 45555041 - 45555009
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||||||||||||||||||    
T  45555041 tgttcataaaatgttttcagcttatttccataa 45555009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 39594951 - 39594809
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| |||||||||| ||||| |||||| ||||||||||||| ||| ||||||||||||| | |||| ||||  ||| |||||||||||    
T  39594951 attgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttattaagttgttttcagc 39594852  T
Q  162 ttatttccataaatt---ccagatagcttgtgaaaacagctta 201  Q
    |||||| ||||| ||   | ||||| ||| |||||||||||||    
T  39594851 ttattttcataagttcaacaagatatcttatgaaaacagctta 39594809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 204
Target Start/End: Complemental strand, 7985120 - 7984968
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 154  Q
    |||||| |||| || ||||||| |||||||| |||||||  ||||||||| | ||||||||| || | ||||||||||| |||  ||||||||||  |||    
T  7985120 tgtttagattggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgt 7985021  T
Q  155 tttcagcttatttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    ||||||||||||| ||||||||   | ||||||||| |||||| |||||||||    
T  7985020 tttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatag 7984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 10640092 - 10640010
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  10640092 cttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 12425716 - 12425570
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac---tatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||||||| |||||||| | ||||| |||||||||| |||||||||||||   |||||||||| | ||  | |||||  |||| |||||||||     
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaaacattgtcaataagttgttttcaa 12425617  T
Q  161 cttatttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    ||||||| ||||| ||   | ||||||||||||||||||||||||||    
T  12425616 cttattttcataagttctccaagatagcttgtgaaaacagcttatag 12425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 41419463 - 41419357
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| | |||||| | |||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||| |  | |||||||     
T  41419463 attgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctattttcaga 41419364  T
Q  162 ttatttc 168  Q
    |||||||    
T  41419363 ttatttc 41419357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 39105609 - 39105463
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgaga-ttgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||||||||||||||||  || |||| |||| ||||| || |||||||||| | ||||||||||||||||| |||||||||||  | |||| ||    
T  39105609 attgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctatttttag 39105510  T
Q  161 cttatttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    ||||||| ||||| ||   | ||||||||| ||||||||| ||||||    
T  39105509 cttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 11064810 - 11064727
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttc 145  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||| ||||||||| |||||||    
T  11064810 attgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgacattgttc 11064727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 1464934 - 1465051
Alignment:
Q  51 gaaattgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataa 149  Q
    |||| ||||| |||||||||||||||| ||| || |  |||||| || || |||| |||| ||||||||| ||||||||||||||||  |||| ||||||    
T  1464934 gaaactgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataa 1465033  T
Q  150 attgttttcagcttattt 167  Q
     |||||||||||||||||    
T  1465034 gttgttttcagcttattt 1465051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 9202674 - 9202817
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| |||||| | ||||||| |||||| ||| | ||| ||| ||||| || ||||||||||||| |||||||||||  ||||| ||||    
T  9202674 attgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagc 9202773  T
Q  162 ttatttccataa---attccagatagcttgtgaaaacagcttat 202  Q
    |||||| |||||    ||| ||||| ||| ||||||||||||||    
T  9202774 ttattttcataagttcttcaagataacttatgaaaacagcttat 9202817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 9107234 - 9107162
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagctta 134  Q
    |||||||||||||||||||||||  | ||||| |||||||||| |||||||||||||| ||||||||||||||    
T  9107234 attgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctta 9107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 41534582 - 41534479
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| | |||||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||    ||||||||  |||||||||     
T  41534582 attgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatga---cgttcataagctgttttcaga 41534486  T
Q  162 ttatttc 168  Q
    |||||||    
T  41534485 ttatttc 41534479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 16937809 - 16937914
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| ||||||||  |||||| |||||||||| ||||||| |||||| ||||||||||||||||| |   |||||||  | ||||||||    
T  16937809 attggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagc 16937908  T
Q  162 ttattt 167  Q
    ||||||    
T  16937909 ttattt 16937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 11700301 - 11700196
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    |||||||||| ||||| || ||||||| |||||||||| |||||   |||||| ||| ||||| ||||||| ||||||||||||||| ||||| ||||||    
T  11700301 cttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataaattg-tttcatcttatt 11700203  T
Q  167 tccataa 173  Q
    | |||||    
T  11700202 ttcataa 11700196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 19460260 - 19460309
Alignment:
Q  71 atttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  19460260 atttgagtttatctactggcataagtttagtgagattgtttgggagaact 19460309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 499702 - 499769
Alignment:
Q  107 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||||||||||||| ||||||||||||||||| || ||| | || ||||||||||||||||||||||||    
T  499702 tgtttgggagaacttatgaaaacagcttatgacat-gttaacaagttgttttcagcttatttccataaa 499769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 40426908 - 40426804
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 162  Q
    |||||||||||||| |||||||  | |||||||||||||||| |||||||| |  | |||||||||||||||||  ||| |||||||  | |||| ||||    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagct 40426809  T
Q  163 tattt 167  Q
    |||||    
T  40426808 tattt 40426804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 4625814 - 4625767
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||    
T  4625814 tatgaaaacagcttatgaaattgttcatacattgttttcaacttattt 4625767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 6096691 - 6096576
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||| |||||||  |||||||| ||||||| |||||||||| | || || |||||| | | ||||||||| ||| |||||||||||  |||| |||||    
T  6096691 attgacgtatttgaacttatctactggcataagttttgtgagacttttaggaagaacttacgtaaacagcttgtgacattgttcataagctgttctcagc 6096592  T
Q  162 ttatttccataaattc 177  Q
    | |||| |||||||||    
T  6096591 tcattttcataaattc 6096576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 42100450 - 42100344
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    |||||||||| |||||||  ||||||||||||||| || ||| || |||||| | |||||| ||||||||| || ||||| ||  |||||||| ||||||    
T  42100450 cttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaaggtgttttcatcttatt 42100351  T
Q  167 tccataa 173  Q
    | |||||    
T  42100350 ttcataa 42100344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 42583261 - 42583363
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgt 154  Q
    ||||| |||||||||| |||||  | || || | ||||||||||| |||  ||||||||||||||| ||||||||| |||| | ||||||||||| ||||    
T  42583261 tgtttgaattgacttacttgagcgtgtccactgacataaattttgcgaggctgtttgggagaactaatgaaaacagtttataacattgttcataagttgt 42583360  T
Q  155 ttt 157  Q
    |||    
T  42583361 ttt 42583363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 1899235 - 1899183
Alignment:
Q  124 aaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||||||||| || || ||||| |||||||||||||||||||||||||||    
T  1899235 aaaacagcttatgacat-gtgcataagttgttttcagcttatttccataaattc 1899183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 8334657 - 8334604
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| ||||||||| ||  ||||||||||||||||||||||||| |||||    
T  8334657 tatgaaaatagcttatgacatatttcataaattgttttcagcttattttcataa 8334604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 19460323 - 19460423
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatttccat 171  Q
    |||||| ||||||| ||||||| ||| |||||| ||||| |||||||| | | ||||| ||||||||||| |||||||  || ||||||||||||| |||    
T  19460323 ttgagtctatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatgatatttttcataagctg-tttcagcttattttcat 19460421  T
Q  172 aa 173  Q
    ||    
T  19460422 aa 19460423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 16457938 - 16458010
Alignment:
Q  96 ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||||| ||||||||||||| |||||||||||||||||| | | |||||||  | ||||||| ||||||    
T  16457938 ttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattt 16458010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 17258845 - 17258920
Alignment:
Q  98 ttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||| ||| ||||||||||| |||||||| ||||||||| || ||||||||  |||||||||||||||| |||||    
T  17258845 ttgtgacattctttgggagaacctatgaaaatagcttatgacat-gttcataagctgttttcagcttattttcataa 17258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 42228156 - 42228080
Alignment:
Q  90 cataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||| ||| |||||||||||||||||||| |||| |||||||||| || ||||||  ||| ||||||| |||||||    
T  42228156 cataagtttcgtgagattgtttgggagaacttatggaaacagcttaagacattgttagtaagttgtttttagcttat 42228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 7674791 - 7674677
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||||  | ||| |||||||||| || |||| |||||| ||| ||||| ||||||| || ||| ||||  ||||||||||    
T  7674791 attggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgacat-gtttataaggtgttttcagc 7674693  T
Q  162 ttatttccataaattc 177  Q
    |||||| || ||||||    
T  7674692 ttattttcacaaattc 7674677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 7705924 - 7705999
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||||||||||||  |||||||  |||||| ||||||||   | ||||||||||| ||||||||||||||||||    
T  7705924 attgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatga 7705999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 7808611 - 7808544
Alignment:
Q  101 tgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    ||||| ||||||||||| || ||||||| ||||||| | |||||||||||  ||||||||||||||||    
T  7808611 tgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattt 7808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 9106929 - 9106854
Alignment:
Q  99 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| ||||||||| |||||| ||||||||| ||||| || |  |||||||  ||||||||||||||||||||||    
T  9106929 tgtgacattgtttggaagaacttatgaaaacaacttataatgtatttcataagctgttttcagcttatttccataa 9106854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 12433099 - 12433186
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataa 149  Q
    |||| |||||||||  |||| ||| ||||||  |||||||||||||||||||||||  |||||||| |||||| || |||| ||||||    
T  12433099 attggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaagttatgaaaatagcttacgacattgatcataa 12433186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 39248216 - 39248146
Alignment:
Q  89 gcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttca 159  Q
    |||||| |||||||||| ||||||||||||| ||| ||||||||||||||  ||||||||||  ||||||||    
T  39248216 gcataagttttgtgagactgtttgggagaacttataaaaacagcttatga-cttgttcataagctgttttca 39248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 2880532 - 2880585
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||| |||||||| ||||||| ||||||||  |||||||||||||||||||||||    
T  2880532 tatggaaacagctaatgatat-gttcataaggtgttttcagcttatttccataaa 2880585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 29925952 - 29925874
Alignment:
Q  96 ttttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| | |||||||   || |||||| ||||||| |||||    
T  29925952 ttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataa 29925874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 31038418 - 31038341
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 31038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 31047642 - 31047565
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 31047565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 39983716 - 39983679
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgtttt 157  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  39983716 tatgaaaacaacttatgatattcttcataaattgtttt 39983679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 41981645 - 41981715
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaa 150  Q
    ||||||||  |||| | |||||||||| ||||||||||||| ||||||||||||  |||| ||||||||||||    
T  41981645 ttatctactagcattagttttgtgagactgtttgggagaacttatgaaaacagc--atgacattgttcataaa 41981715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 3520722 - 3520646
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||| |||||||||| | ||||||  | |||| || ||||||| ||||||||||||| |||||||||| |||||||    
T  3520722 aattggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatga 3520646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 14182386 - 14182450
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataaattc-ca-gatagcttgtgaaaacagcttata 203  Q
    ||||||||||||||||||| ||||||| ||||| ||| || |||| ||| |||||||||||||||    
T  14182386 tgttcataaattgttttcaacttattttcataagttctcaggataacttatgaaaacagcttata 14182450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 15015982 - 15015930
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||||||||| |||||||| | |||||  ||||||||| ||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaact 15015930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 19138726 - 19138754
Alignment:
Q  145 cataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||||||||||||||    
T  19138726 cataaattgttttcagcttatttccataa 19138754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 35445775 - 35445843
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttat 135  Q
    ||||||||||||||||||| | ||||| |||||||||| | ||||  ||||  ||||||||||||||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 35445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 37611177 - 37611252
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||||| |||| || ||||||||| ||| ||| || ||||||||  ||||||||| ||||||||||||    
T  37611177 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataa 37611252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 37787907 - 37787982
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||||| |||| || ||||||||| ||| ||| || ||||||||  ||||||||| ||||||||||||    
T  37787907 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataa 37787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 27028971 - 27028830
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||||||||| || | ||||||||||||| || ||| |||||||  | ||||||||||||    
T  27028971 acttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttat 27028872  T
Q  166 ttccataa---attccagatagcttgtgaaaacagcttatag 204  Q
    || |||||    | | ||||||||| ||||||||||||||||    
T  27028871 tttcataagctctccaagatagcttatgaaaacagcttatag 27028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 32840911 - 32841022
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||| ||||| ||||||||   || || ||||| |||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  32840911 aattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcag 32841010  T
Q  161 cttatttccata 172  Q
    ||||||| ||||    
T  32841011 cttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 6950466 - 6950355
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| | |||| ||||| | ||||| | |||  |||| ||||||||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgaca-tgtcgataagttgttttcag 6950368  T
Q  161 cttatttccataa 173  Q
    |||||||||||||    
T  6950367 cttatttccataa 6950355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 33808446 - 33808336
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||| ||| |||| ||  ||| ||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  33808446 attgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagc 33808348  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  33808347 ttattttcataa 33808336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 3536934 - 3536982
Alignment:
Q  125 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3536934 aaacagcttatgacattgttcataaattgttttcagcttatttccataa 3536982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 42893420 - 42893492
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgat 138  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||||||| ||| |||||||||||||||    
T  42893420 acttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaacagcttatgat 42893492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 1930163 - 1930035
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt- 176  Q
    |||||||| | ||||| |||||||| ||| ||||||||||||  ||||||||| |||||| |||||||||||  |||||||||||||||| || ||  |     
T  1930163 ttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtc 1930064  T
Q  177 --ccagatagcttgtgaaaacagcttata 203  Q
      | ||||||||| |||||||||||||||    
T  1930063 accaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 26771403 - 26771334
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| |||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatga 26771334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 30251380 - 30251524
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||| | ||||| ||| |||||| ||||||||||||| || |||||||||||||   ||| |||||||  | ||| ||||    
T  30251380 attggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttacagc 30251479  T
Q  162 ttatttccataaat--tcc-agatagcttgtgaaaacagcttata 203  Q
    |||||| ||||| |  ||| ||||||||| |||||||||||||||    
T  30251480 ttattttcataagtggtccaagatagcttatgaaaacagcttata 30251524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 29168016 - 29168094
Alignment:
Q  96 ttttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| |||||||||||||| || ||||||| |||||| ||| |||||||||  || |||||||||||||||||    
T  29168016 ttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataa 29168094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 31716158 - 31716264
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    |||||||||| |||||||  ||||||  |||| ||||| ||||| |||||||| | ||||||||||||||| ||| |||||||  | |||||||||||||    
T  31716158 cttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatt 31716257  T
Q  167 tccataa 173  Q
    || ||||    
T  31716258 tctataa 31716264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 42215277 - 42215343
Alignment:
Q  107 tgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||||||||| |||||    
T  42215277 tgtttgggagaactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttatttacataa 42215343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 1058008 - 1058113
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    |||||||||| ||||||||   ||||| |||||||||| ||||||||||||| | ||||||| |||||||| ||| ||||| | || ||||| |||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattagtt-ttttccgcttatt 1058106  T
Q  167 tccataa 173  Q
    | |||||    
T  1058107 ttcataa 1058113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 1892143 - 1892201
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgg 113  Q
    |||||| |||||||||||||||||||||||||| ||||||   ||||||||||||||||    
T  1892143 tgtttagattgacttatttgagtttatctaccgtcataaacacttgtgagattgtttgg 1892201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 14280347 - 14280453
Alignment:
Q  63 attgacttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||||||| ||||||||| |||||||  ||||||| ||||||||||| |||  ||||||||||  |||||| ||||||| |||   ||||| ||    
T  14280347 attgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaatttatgacattgttcgtaagccgtttttag 14280446  T
Q  161 cttattt 167  Q
    |||||||    
T  14280447 cttattt 14280453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 35534532 - 35534614
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||| | ||||||||||||| ||||||||   ||||| |||||||||| |||||| |||||| | ||||||||||||||||    
T  35534532 tgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatga 35534614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 41606875 - 41606940
Alignment:
Q  108 gtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||| ||| ||||||||||||||| || ||||| || |||||||||||||||||||||||    
T  41606875 gtttgggagaaactacgaaaacagcttatgacat-gttcaaaagttgttttcagcttatttccataa 41606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 36963280 - 36963337
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||| |||||||||| | |||||| ||||||| |||||||||| ||||||||||||||    
T  36963280 attggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaact 36963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 38602471 - 38602414
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    ||||||||||||||| |||||||| | ||||| |||||||||  ||||||||||||||    
T  38602471 attgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaact 38602414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 1096634 - 1096578
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac 119  Q
    |||||||||||||||||||| ||  | ||||| |||||||||||| |||||||||||    
T  1096634 attgacttatttgagtttatttagtgacataagttttgtgagattttttgggagaac 1096578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 27493077 - 27492965
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||||||||| |||||| | || |||| |||||| | ||| ||||||||| || |||||||||  || ||| |||||||||||  | |||||| |||||    
T  27493077 acttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaacaagttgtgacattgttcataagctattttcaacttat 27492978  T
Q  166 ttccataaattcc 178  Q
    || ||||||||||    
T  27492977 tttcataaattcc 27492965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 30191072 - 30191179
Alignment:
Q  68 cttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||||||||||||||||  |||||||    |||| ||| ||||||||||| || ||| ||||| ||||||| || ||||| || |||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacat-gttcaaaacttgttttcagcttat 30191170  T
Q  166 ttccataaa 174  Q
    |||||||||    
T  30191171 ttccataaa 30191179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 38648495 - 38648420
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| ||||||| || |||||||| | ||||| |||||||||| ||||||||||| | ||||||||||||| ||||    
T  38648495 attggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatga 38648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 38750495 - 38750424
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgata 139  Q
    ||||||||||||||||||  |||||| |||||||||||| ||||  ||||| ||||| |||| |||||||||    
T  38750495 ttatttgagtttatctacttgcataagttttgtgagattatttgaaagaacttatgagaacaccttatgata 38750424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 6882044 - 6881994
Alignment:
Q  90 cataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgata 139  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagctcatgata 6881994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7008749 - 7008711
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataa 94  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  7008749 tgtttgaattgacttatttgagtttatctactggcataa 7008711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 28763485 - 28763439
Alignment:
Q  90 cataaattttgtgagattgtttgggagaac-tatgaaaacagcttat 135  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  28763485 cataagttttgtgagactgtttgggagaacttatgaaaacagcttat 28763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 10383970 - 10383918
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||| ||| |||||||  ||||| ||||||||||||||||    
T  10383970 tatgaaaacagcttatgacatt-ttcataagctgtttacagcttatttccataa 10383918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 11376848 - 11376732
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttca 159  Q
    ||||| |||||||||| |||||||| |  |||| || |||||||| | |||||||||||| ||||||| ||||| ||| || ||| |||  |||||||||    
T  11376848 aattggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacat-gttaatatcttgttttca 11376750  T
Q  160 gcttatttccataaattc 177  Q
    |||||||| |||| ||||    
T  11376749 gcttattttcatagattc 11376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 13459730 - 13459678
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||| ||| |||||||| |||||||||| ||||| |||||    
T  13459730 tatgaaaacagcttatgacatt-ttcataaactgttttcagcctattttcataa 13459678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 30657706 - 30657751
Alignment:
Q  66 gacttatttgagtttatctaccggcataaattttgtgagattgttt 111  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||    
T  30657706 gacttatttgagtttatctaatgacataaattttgtgagactgttt 30657751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 30918220 - 30918146
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| |||||| |||| || ||||||||| ||| ||| |||  |||||| |||||||||||||||||||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacatt--tcataagttgttttcagcttatttccataa 30918146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 42043291 - 42043368
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||| |||| ||| | ||||| |||| ||||| |||| |||||||| |||| ||||||||||||||||| |||||||    
T  42043291 ttgagcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatgatatttttcataa 42043368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 16162904 - 16162828
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| |||||||||||||||||||  |||||||   |||||||| |||||| || ||| ||||||||||||||||||    
T  16162904 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatga 16162828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 16915833 - 16915877
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagatt 107  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||    
T  16915833 attgatttatttgagtttatctacttacataaattttgtgagatt 16915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 31751546 - 31751594
Alignment:
Q  125 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||| |||||||||||  | |||||||||||||| |||||    
T  31751546 aaacagcttatgacattgttcataagctattttcagcttattttcataa 31751594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 43717860 - 43717928
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 130  Q
    |||| |||||||||| |||||||  | ||||| |||||||||| | ||||||||||| |||||||||||    
T  43717860 attggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 44401626 - 44401594
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| ||||||||||||||||||||||||    
T  44401626 tgttcatacattgttttcagcttatttccataa 44401594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 52315123 - 52315234
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||||||||||||| | | ||| |||||||||||||||||| ||||| ||| |||||| ||||| | ||| ||||||| ||| |||||||    
T  52315123 attgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttcagc 52315222  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  52315223 ttattttcataa 52315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 21731588 - 21731697
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||||  ||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||| | | | |||||||| | |||||| |||| ||    
T  21731588 ttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactt 21731687  T
Q  168 ccataaattc 177  Q
     |||||||||    
T  21731688 tcataaattc 21731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 25904150 - 25904254
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 162  Q
    |||||||||||||| ||||| |  | |||||||||||||||| ||||||||||| | |||||||||||||||||  ||| |||||||  | |||||||||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  163 tattt 167  Q
    |||||    
T  25904250 tattt 25904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 17822795 - 17822936
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||||||||| |||||||| | ||||| || ||||||| | ||| ||||||| |||||||||||||||||| ||| |||||||  | |||| |||||||    
T  17822795 acttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttat 17822894  T
Q  166 ttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    || ||||| ||   | ||||||||| |||||||| |||||||    
T  17822895 tttcataagttctccaagatagcttatgaaaacaacttatag 17822936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 49939870 - 49939981
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 154  Q
    ||||| ||||| ||||||| || ||||||||  ||||||  ||||||||| | ||||| |||||| ||||||| ||||||||| |||||||||||  |||    
T  49939870 tgtttcaattggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgt 49939969  T
Q  155 tttcagcttatt 166  Q
    ||||||||||||    
T  49939970 tttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 1374502 - 1374614
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||| ||||| ||||||||  |||||||||||||||   ||||||||||||  |||||||||| ||||||| | | |||||||||| |||||| |    
T  1374502 attggcttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaacaacttatgacaatattcataaattattttcaac 1374601  T
Q  162 ttatttccataaa 174  Q
    |||||| ||||||    
T  1374602 ttattttcataaa 1374614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 7367980 - 7368056
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaact-atgaaaacagcttatga 137  Q
    |||||||||||||||||||||||| ||||||||   |||||||| ||||||||||| || |||||||||||||||||    
T  7367980 attgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatga 7368056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 41336904 - 41336789
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||||||||||||   ||||| ||||||||||| ||| || ||||| || ||||||||||||||| | | |||||||  | |||||| |    
T  41336904 attgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttttttcaac 41336805  T
Q  162 ttatttccataaattc 177  Q
    |||||| | |||||||    
T  41336804 ttattttcgtaaattc 41336789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 54426187 - 54426112
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||| |||||||||| |||||||| ||||||| |||||||||| || |||||||||| || |||||||||||||||    
T  54426187 attggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatga 54426112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 29657527 - 29657453
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||||||||||| |||||||||  || || ||||||||||||| ||| |||||| ||||||||||||||||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatga 29657453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 55437220 - 55437134
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcata 148  Q
    |||| ||||||||||||||||||| | ||||| |||||||| ||||||||  ||||| |||||||||| |||||||  |||||||||    
T  55437220 attggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttatgacgttgttcata 55437134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 24169407 - 24169296
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||| |||||||||||| ||||||| |||||||||| | |||| |||||| | | |||| ||||||||| ||| |||||||  | |||||| |    
T  24169407 attggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaac 24169308  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  24169307 ttattttcataa 24169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 27043756 - 27043859
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    ||||||||||||||| |||||||| | ||||| |||||||| | ||||||| ||||  |||| ||| ||||||||  || || ||||||||||||| |||    
T  27043756 attgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatggcatcgtccataaattgtttttagc 27043855  T
Q  162 ttat 165  Q
    ||||    
T  27043856 ttat 27043859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 35571557 - 35571702
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| ||||||||  |||||| ||||||| ||| |||||||||||| | | |||||||||||| | | ||||||| |  || ||||| |    
T  35571557 attggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttcaac 35571656  T
Q  162 ttatttccataaattc---cagatagcttgtgaaaacagcttatag 204  Q
    |||||| || || |||    ||||||||| ||||||||||||||||    
T  35571657 ttattttcacaagttctctaagatagcttatgaaaacagcttatag 35571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 39011054 - 39011129
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||||||||||||| |||||| | ||||||| | | ||||||  |||||||||||| ||||||||||||||||||    
T  39011054 attgacttatttgagcttatcttcgggcataagtatcgtgagacagtttgggagaacatatgaaaacagcttatga 39011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 1706757 - 1706679
Alignment:
Q  72 tttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataa 149  Q
    ||||||||||||||| | ||||| ||||||||||  ||||| ||| || |||||||||||||||||  |||||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataa 1706679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 39691068 - 39691130
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 118  Q
    ||||| |||||||||||||||| ||||||||  |||||| |||||||||| |||||| |||||    
T  39691068 tgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaa 39691130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 15173229 - 15173326
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga-actatgaaaacagcttatgatattgttcataaattgttttca 159  Q
    ||||||||||||||  |||||||| | ||||| |||||||||| |||||||||||   |||||||| ||||||||| | | ||||||| || ||||||    
T  15173229 attgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagtttttttca 15173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 24929578 - 24929526
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  24929578 tatggaaacagcttatggcat-gttcataaattgttttcagcttatttccataa 24929526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 25571403 - 25571299
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| ||||||||||||||||||| | ||||| ||   ||| | ||||| ||||||| |||| |||||| |||||||| |||||||||  ||||||||||    
T  25571403 attggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatgata-tgttcataagctgttttcagc 25571305  T
Q  162 ttattt 167  Q
    ||||||    
T  25571304 ttattt 25571299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 29263450 - 29263406
Alignment:
Q  125 aaacagcttatgatattgttcataaattgttttcagcttatttcca 170  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  29263450 aaacagcttatgatat-gttcataagttgttttcagcttatttcca 29263406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 679318 - 679254
Alignment:
Q  140 ttgttcataaattgttttcagcttatttccataaattccagatagcttgtgaaaacagcttatag 204  Q
    |||||| |||| |||||| ||||||||| ||||| ||| ||||| ||| ||||||||||||||||    
T  679318 ttgttcctaaactgttttgagcttattttcataagttcaagataacttatgaaaacagcttatag 679254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 1137820 - 1137745
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||| | ||||| |||||||| ||||||||| ||||||| || |||||||| |||||||||| ||||||||||||    
T  1137820 ttgtgacactgtttaggagaacttatgaaaacatcttatgacat-gttcataagttgttttcagtttatttccataa 1137745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 6987667 - 6987778
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaat-tttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    ||||||||| ||||||||||||||  |||||| | ||||||||| ||||||||||| | |||| | ||| ||||||| | ||| |||||| | ||||||     
T  6987667 attgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatgaca-tgtccataaactattttcaa 6987765  T
Q  161 cttatttccataa 173  Q
    |||||||||||||    
T  6987766 cttatttccataa 6987778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 13126529 - 13126613
Alignment:
Q  90 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| |||||||||| ||||||| |||||| || |||||||||||||| |||  ||||||  | |||||||||||||| |||||    
T  13126529 cataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataa 13126613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 28615478 - 28615384
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgtttt 157  Q
    |||||||||||| |||||||||||  |||||||   |||||||||||||| ||||||| ||||||||||||| |||| ||| ||||||| |||||||    
T  28615478 attgacttatttaagtttatctactagcataaacacttgtgagattgttt-ggagaacttatgaaaacagctaatgacatt-ttcataagttgtttt 28615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 40174701 - 40174633
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 130  Q
    ||||| ||||||||||||||||||   ||||| |||||||||| ||||||||| ||| |||||||||||    
T  40174701 attgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaacag 40174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 7694015 - 7694081
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataaa--ttcca-gatagcttgtgaaaacagcttatag 204  Q
    ||||||||| ||||||||||||||||||||||||   |||| |||| ||| ||||||||||||||||    
T  7694015 tgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatag 7694081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 21043162 - 21043237
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga-actatgaaaacagcttatga 137  Q
    ||||||||||||||||||| |||| ||||| ||  |||||||| |||||||||||   |||| |||||||||||||    
T  21043162 attgacttatttgagtttacctacaggcatgaaacttgtgagactgtttgggagaggttatggaaacagcttatga 21043237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 22030347 - 22030272
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||||||||||||| || ||||   |||||| |||||||||  | ||||||||||| ||||||||||||||||||    
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatga 22030272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 25332891 - 25332808
Alignment:
Q  91 ataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||| |||||||||| | ||||||||||||   ||||||| ||||||  ||| ||||||| ||||||||||||||||| |||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataa 25332808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 49202763 - 49202684
Alignment:
Q  89 gcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||| |||||||||| ||||||| |||||| || ||| ||| |||| | ||||||||||| ||||||||| |||||||    
T  49202763 gcataagttttgtgagactgtttggaagaacttataaaaccagattatcacattgttcataagttgttttcaacttattt 49202684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 19305070 - 19304961
Alignment:
Q  63 attgacttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    ||||||||||||||| |||||||  | |||||   ||||||||||||| ||||||||  | || ||||||||||||| | ||| ||||| ||||||||||    
T  19305070 attgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgaca-tgtccataagttgttttcag 19304972  T
Q  161 cttatttccat 171  Q
    ||| |||||||    
T  19304971 cttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 20936214 - 20936266
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| |||||||||| ||||||||  |||||||| |||||||||||||    
T  20936214 tatgaaaacaacttatgatat-gttcataagctgttttcaccttatttccataa 20936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 35064920 - 35064887
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataaa 174  Q
    |||| |||||||||||||||||||||||||||||    
T  35064920 tgtttataaattgttttcagcttatttccataaa 35064887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 37575862 - 37575974
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 160  Q
    |||||||||||||||||||||| |  ||||||| | | |||| |||||||| |||||| |||||||| | ||||| | | |  |||||| ||||||||||    
T  37575862 attgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataaca-tactcataagttgttttcag 37575960  T
Q  161 cttatttccataaa 174  Q
    || |||||||||||    
T  37575961 ctcatttccataaa 37575974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 40613323 - 40613290
Alignment:
Q  55 ttgtttaaattgacttatttgagtttatctaccg 88  Q
    |||||| |||||||||||||||||||||||||||    
T  40613323 ttgtttcaattgacttatttgagtttatctaccg 40613290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 50799992 - 50800064
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttcca 170  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| | |||  ||||  |||||||||||||||||||    
T  50799992 ttgtgagattgtttgggagaactaatgtaaacaacttatgaca-tgtctataagctgttttcagcttatttcca 50800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 20719834 - 20719746
Alignment:
Q  76 agtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctt 163  Q
    |||||||||||  |||||| ||||||| || | ||||| |||||| | ||||||||||||||| ||||||  |||  ||||||||||||    
T  20719834 agtttatctactagcataagttttgtgcgactatttggaagaacttaagaaaacagcttatgacattgtttgtaagctgttttcagctt 20719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 21523674 - 21523591
Alignment:
Q  90 cataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||| | ||||||| ||||  |||||||||| ||||||| ||| |||||||  | |||||||||||||| |||||    
T  21523674 cataaattttgtgacactgtttggaagaatttatgaaaacaacttatgacatttttcataagct-ttttcagcttattttcataa 21523591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 29388757 - 29388701
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||||||||||||  ||||||||   ||||| |||||| ||||||||||||||||||    
T  29388757 ttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaact 29388701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 43506076 - 43506004
Alignment:
Q  66 gacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatga 137  Q
    |||||||||||||||||| |||| || || |||||||||| |||| ||||| |||  |||||| |||||||||    
T  43506076 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatagcttatga 43506004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 43824348 - 43824316
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||| |||||||||||||||||||||||    
T  43824348 tgttcataagttgttttcagcttatttccataa 43824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 44862917 - 44862965
Alignment:
Q  70 tatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 118  Q
    |||||||| || ||||| |||| || |||||||||||||||||||||||    
T  44862917 tatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaa 44862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 49003796 - 49003888
Alignment:
Q  58 tttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataa 149  Q
    |||| ||||||||||||||| ||||| || | | ||| |||||||| |  ||||||||| || |||||||| ||| ||||| |||||||||||    
T  49003796 tttagattgacttatttgagcttatccactgacgtaagttttgtgaaacggtttgggagaaaatatgaaaagagcgtatgacattgttcataa 49003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 19302482 - 19302600
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgt 154  Q
    ||||| |||||||||||||||| |||||||| | ||||| |||||||||| | ||||||||||  |||||||||||||||||| | | |||||||| | |    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttt 19302581  T
Q  155 tttcagcttatttccataa 173  Q
    ||||| ||||||| |||||    
T  19302582 tttcaacttattttcataa 19302600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 20526882 - 20526966
Alignment:
Q  90 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||  | |||||||||||||| |||||    
T  20526882 cataaattttgtgagactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataa 20526966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 20526590 - 20526445
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||||||||||||  || | ||||||||||||| |||||| |||||| ||||||||||| |||| | ||| ||| |||  |||||| |||    
T  20526590 attgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagc 20526491  T
Q  162 ttatttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    |||||| ||| | ||   | | ||||||| ||||||||||||||||    
T  20526490 ttattttcattagttctccaaaatagcttatgaaaacagcttatag 20526445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 48470188 - 48470044
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||  | ||||| |||| ||||||||||||||||||| |||||||||||||||||  ||| |||||||  | |||| |||    
T  48470188 attggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagc 48470089  T
Q  162 ttatttccataa---attccagatagcttgtgaaaacagcttata 203  Q
    |||| | |||||   |||| | ||||||| |||||||| ||||||    
T  48470088 ttatgttcataagttattcaaaatagcttatgaaaacaacttata 48470044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 34036068 - 34035956
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 154  Q
    ||||| |||||||||||||||| |||||||| | ||||  | |||||||| |  |||| |||||| ||||||| | ||||||| ||||||||||| ||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgt 34035969  T
Q  155 tttcagcttattt 167  Q
    ||||| |||||||    
T  34035968 tttcaacttattt 34035956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 19022527 - 19022622
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| | ||| | |||||||||||||||||||||||  |||||||||| ||||||| | | ||||||| |||| |||| ||||||| |||||    
T  19022527 ttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataa 19022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 19214348 - 19214443
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||  |||||| |||||||||||||||||||||||| ||||||||||||  |||| | | |||||||| |  ||||| ||||||| |||||    
T  19214348 ttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataa 19214443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 33678908 - 33678779
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt- 176  Q
    ||||||||  |||||| ||||||||||   ||||||||||| |||||||||| ||||| | ||||||||| |  |||||||| ||||||| || || ||     
T  33678908 ttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagttt 33678809  T
Q  177 --ccagatagcttgtgaaaacagcttatag 204  Q
      | ||||||||| ||||||||||||||||    
T  33678808 tccaagatagcttatgaaaacagcttatag 33678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 22296146 - 22296231
Alignment:
Q  55 ttgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac--tatgaaaacagcttatgat 138  Q
    |||||| ||||||||||||||||||||||    | ||||| || |||||||||||||||||||||  ||| |||| ||||||||||    
T  22296146 ttgtttgaattgacttatttgagtttatccggtgacataagttctgtgagattgtttgggagaactttatcaaaatagcttatgat 22296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 173
Target Start/End: Original strand, 21568447 - 21568532
Alignment:
Q  89 gcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||| | | | |||||||  | |||||| |||| ||||||||    
T  21568447 gcatatattttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataa 21568532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 22283572 - 22283629
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    ||||||||||||||  |||||||| | |||||||||||||||| ||||| ||||||||    
T  22283572 attgacttatttgaacttatctactgtcataaattttgtgagactgtttaggagaact 22283629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 25596174 - 25596101
Alignment:
Q  65 tgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatga 137  Q
    ||||||||||||| ||||||||| ||||||   ||||||||||||| |||| || |||| ||||||||||||||    
T  25596174 tgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatga 25596101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 39968006 - 39967919
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc---cagatagcttgtgaaaacagcttatag 204  Q
    |||||||||||||||||  |||||||||||  |||||||| ||||||| ||| | |||   |||||||||| |||||||| |||||||    
T  39968006 tatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatag 39967919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 44822102 - 44821959
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||||||||||||||||||||| | | ||||| |||||||||||||||| | ||| || | ||||||| ||||  | | |||  |||| ||||||||| |    
T  44822102 attgacttatttgagtttatctgctgacataagttttgtgagattgtttagcagacctcacgaaaacaactta-aaaaatgtcaataagttgttttcaac 44822004  T
Q  162 ttatttccataaat--tccag-atagcttgtgaaaacagcttata 203  Q
    |||||| ||||| |  ||||| ||||||| |||||||||||||||    
T  44822003 ttattttcataagttctccagaatagcttatgaaaacagcttata 44821959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 25670510 - 25670617
Alignment:
Q  61 aaattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttc 158  Q
    ||||||||||| ||||| |||||||  | |||||  | |||||||| |||||| || |||| ||||||||| ||||||| || ||| |||||||||||||    
T  25670510 aaattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacat-gttaataaattgttttc 25670608  T
Q  159 agcttattt 167  Q
    |||||||||    
T  25670609 agcttattt 25670617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 33601342 - 33601438
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctta 164  Q
    ||||||||| |||||||  ||||||| |||||||||| | |||  ||||||| ||||||||||||||||| | | |||||||  | |||||||||||    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagctta 33601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 204
Target Start/End: Complemental strand, 30535714 - 30535562
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattg 153  Q
    ||||| |||||||||||||||||| || ||| | ||||||   ||| |||| ||||| ||||||| |||||||||| ||||||||| ||||| |||  ||    
T  30535714 tgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgata-tgttcgtaagctg 30535616  T
Q  154 ttttcagcttatttccataaattc---cagatagcttgtgaaaacagcttatag 204  Q
    ||||||| |||||| ||||  |||    ||||||||| || |||||||||||||    
T  30535615 ttttcaggttattttcatatgttctataagatagcttatggaaacagcttatag 30535562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 33266412 - 33266467
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 118  Q
    ||||||||||||||| |||||||||| ||||| |||||||| | | ||||||||||    
T  33266412 attgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaa 33266467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 4970718 - 4970792
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 136  Q
    ||||||||||||||| ||||||   | ||||| | |||||||| ||||||||||||| |||||||||| ||||||    
T  4970718 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 36517715 - 36517612
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    ||||||||| ||| |||| ||||||| |||| | ||| ||||||||||||| ||| |||||||||  ||| |||||||||||  | ||||||| ||||||    
T  36517715 ttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagctattttcagtttattt 36517618  T
Q  168 ccataa 173  Q
     |||||    
T  36517617 tcataa 36517612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 46280211 - 46280282
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac----tatgaaaacagcttat 135  Q
    ||||||||||||||||| | | ||||  |||||||||| |||||||||||||    ||||||||||||||||    
T  46280211 cttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaacttattatgaaaacagcttat 46280282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 20234611 - 20234535
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagctt 133  Q
    ||||| ||||| |||||||||| |||| |||  |||||| |||||||||| | |||||||||||| ||| ||||||||    
T  20234611 tgtttcaattggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaact-tgacaacagctt 20234535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 25511707 - 25511659
Alignment:
Q  124 aaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||| || ||||||||||||| |||| |||||||||||||    
T  25511707 aaaacagcttatgacat-gttcataaattgtcttcaacttatttccataa 25511659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 28128362 - 28128436
Alignment:
Q  98 ttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    |||||||||||||| ||||||||  |||||||| ||||||      | ||| |||||||||||||||||||||||||||||    
T  28128362 ttgtgagattgttttggagaacttgtgaaaacaacttatg------tgcatgaattgttttcagcttatttccataaattc 28128436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 31744942 - 31744897
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttg 112  Q
    |||||||||| ||||||||||| | |||||||| ||||||||||||    
T  31744942 acttatttgaatttatctaccgacgtaaattttatgagattgtttg 31744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 33894735 - 33894659
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||||||| |||||| |||| || ||||||||||| ||||| || || ||||| |||||||||||||||||| |||||    
T  33894735 ttgtgagactgtttgtgagagcttatgaaaacagcatatgacat-gtccataagttgttttcagcttatttcaataaa 33894659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 45338597 - 45338540
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||| |||||||||||||||| ||  |||||| |||| ||||| ||||||||||||||    
T  45338597 attggcttatttgagtttatccactagcataagttttttgagactgtttgggagaact 45338540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 20526216 - 20526284
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 130  Q
    |||| ||| |||||||||||| |  |||||  |||||||||||||||||| |||||| |||||||||||    
T  20526216 attggcttgtttgagtttatccattggcatgcattttgtgagattgtttgagagaacttatgaaaacag 20526284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 46104497 - 46104604
Alignment:
Q  67 acttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggaga-actatgaaaacagcttatgatattgttcataaattgttttcagctta 164  Q
    ||||||||||| |||||||||| |||||| | |||||| ||||||||||| | | |||||||||| || |||| | |||  ||||| ||||| |||||||    
T  46104497 acttatttgagcttatctaccgtcataaactcttgtgatattgtttgggaaagattatgaaaacaactcatgaca-tgtcaataaaatgtttccagctta 46104595  T
Q  165 tttccataa 173  Q
    ||| |||||    
T  46104596 ttttcataa 46104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 34910340 - 34910446
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    ||||||||||||||||||| |  || | ||||| |||||||||||| |||| ||||||||||||||||||| ||||||||| | |||||||| ||||| |    
T  34910340 cttatttgagtttatctactgatatcagttttgggagattgtttggaagaaactatgaaaacagcttatgacattgttcatgagttgttttccgcttact 34910439  T
Q  167 tccataa 173  Q
    | |||||    
T  34910440 ttcataa 34910446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 31813289 - 31813195
Alignment:
Q  79 ttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccata 172  Q
    |||| ||| ||||||| |||||||||| | |||||||||||| |||||||  |||||||| |||||||||||   ||||||||||||||| ||||    
T  31813289 ttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcata 31813195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 34404656 - 34404766
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 165  Q
    ||||||||||||||||| || | ||||| ||||||| || | ||||||||||| |||||||| | ||||||| | ||| |||||  |||||||||| |||    
T  34404656 acttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatgaca-tgtacataagctgttttcagcatat 34404754  T
Q  166 ttccataaattc 177  Q
    || |||||||||    
T  34404755 tttcataaattc 34404766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 31623701 - 31623619
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||| ||||||||||||||| ||||||||| ||| ||| |||| |||| | |||||||||||| | |||||| |||||||||    
T  31623701 tgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatga 31623619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 2455126 - 2455030
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    ||||||||  ||||||||   ||||| |||||||||| ||||||||||||||  |||||||   |||||| |||||||||||  ||||||||||||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac---ttatgacattgttcataacctgttttcagcttattt 2455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 34939824 - 34939776
Alignment:
Q  125 aaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  34939824 aaacagcttatgacat-gtccataaattgttttcagcttatttccataaa 34939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 848132 - 848021
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||  | ||||| |||||||||| ||||||| |||||| || ||||| |||||||| ||| ||| |||  | ||||||||    
T  848132 attgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagcttttttcagc 848034  T
Q  162 ttatttccataaa 174  Q
    |||||| ||||||    
T  848033 ttattttcataaa 848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 2455397 - 2455298
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    ||||||||| ||||||||   ||||| ||| |||| | | |||| ||||||| ||||||||| ||||| | |||||| |||| |||||||||||||||||    
T  2455397 ttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 2735177 - 2735068
Alignment:
Q  99 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaa 194  Q
    ||||||| |||||| || |||| |||||||| |||||||| ||| |||||||  ||||||| |||||||| ||||| ||   | |||| |||| ||||||    
T  2735177 tgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaa 2735078  T
Q  195 cagcttatag 204  Q
    ||||||||||    
T  2735077 cagcttatag 2735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 9912161 - 9912228
Alignment:
Q  107 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||  |||||| ||||||||| |||||    
T  9912161 tgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataa 9912228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 13907722 - 13907618
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    ||||||||||||||||||  ||||||| |||||  |||  ||||| ||||| | ||||||||||||| ||| |||||||| || || ||||||| |||||    
T  13907722 cttatttgagtttatctagtggcataagttttg--agacggtttgagagaatttatgaaaacagcttctgacattgttcacaagttattttcagtttatt 13907625  T
Q  167 tccataa 173  Q
    | |||||    
T  13907624 ttcataa 13907618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 26559169 - 26559244
Alignment:
Q  67 acttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaac-tatgaaaacagcttatgatat 140  Q
    ||||||||||||||| |||| |||||||   ||||||||| ||||||| ||||| |||||||||| ||||||||||    
T  26559169 acttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatat 26559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 30641896 - 30641821
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 130  Q
    ||||| ||||| ||||||||||||||||||   ||||  ||||||||||||||| || |||||| |||||||||||    
T  30641896 tgtttgaattggcttatttgagtttatctatatgcatgcattttgtgagattgtgtgagagaacttatgaaaacag 30641821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 430296 - 430414
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 154  Q
    |||||| ||||  ||||||||  |||| ||| ||||||| |||||| | ||||||| || ||||| |  |||||||| ||||||||||||||| | ||||    
T  430296 tgtttagattggtttatttgaacttatttactggcataagttttgtaatattgtttcggcgaacttacaaaaacagcctatgatattgttcatcagttgt 430395  T
Q  155 tttcagcttatttccataa 173  Q
    ||||  ||||||| |||||    
T  430396 tttcgacttattttcataa 430414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 6538658 - 6538584
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatg 136  Q
    |||| ||||||||||||||| ||  ||||||| ||| |||||| |||| ||||||| | ||||||||||||||||    
T  6538658 attgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatg 6538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 7351590 - 7351620
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctac 86  Q
    |||||||||||||||||||||||||||||||    
T  7351590 tgtttaaattgacttatttgagtttatctac 7351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 9559358 - 9559444
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttc 158  Q
    ||||| |||||||  ||||||| |||||||||| ||||| |||||| | ||||||||||||||  | |||||||||||  |||||||    
T  9559358 ttgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagctgttttc 9559444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 30926658 - 30926588
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||||||| |||| | | |||||||||||  ||||| ||||||| ||||| ||||||||||||||||||    
T  30926658 cttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatga 30926588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 21405080 - 21405157
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgata 139  Q
    ||||||||||||||| |||| ||| | ||||| |||||||||| | |||||| ||||| ||||||| || ||||||||    
T  21405080 attgacttatttgagcttatatactgacataagttttgtgagaatatttgggggaactaatgaaaataggttatgata 21405157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 31624175 - 31624089
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattcc---agatagcttgtgaaaacagcttatag 204  Q
    |||||||||||||||||| || ||||||||  |||||||| ||||||| ||||| |||    ||||||| | ||||||||||||||||    
T  31624175 tatgaaaacagcttatgacat-gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatag 31624089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 33887938 - 33887831
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa--attcca-gatagcttgtgaaa 193  Q
    |||||| |||||||| ||||| | ||||||| ||||||||| || ||||| || ||||||||| |||||||||||||  ||| || |||||||| |||||    
T  33887938 ttgtgacattgtttgagagaatttatgaaaatagcttatgacat-gttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaa 33887840  T
Q  194 acagcttat 202  Q
    |||| ||||    
T  33887839 acagtttat 33887831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 2455955 - 2455923
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataa 94  Q
    |||||||||||||||| ||||||||||||||||    
T  2455955 aattgacttatttgagcttatctaccggcataa 2455923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 6537012 - 6536980
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||| |||||||||||||||||||||||    
T  6537012 tgttcataagttgttttcagcttatttccataa 6536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 2142797 - 2142683
Alignment:
Q  64 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 162  Q
    |||||||||||||||||||||||  |||||| |||| ||||| ||||||||||||| ||||||||||  || ||| | ||||||| |  |||||| ||||    
T  2142797 ttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagct 2142698  T
Q  163 tatttccataaattc 177  Q
    ||||| |||||||||    
T  2142697 tattttcataaattc 2142683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 40682348 - 40682464
Alignment:
Q  90 cataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaat--tccagatagct 186  Q
    ||||| |||||||||||||||||||||||||  | |||| ||||||||| ||||||||||| ||||||||| ||||||| ||||| |  || ||||| ||    
T  40682348 cataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgttttcaacttattttcataagttctcaagatatct 40682447  T
Q  187 tgtgaaaacagcttata 203  Q
    | ||||||| |||||||    
T  40682448 tatgaaaactgcttata 40682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 29628673 - 29628814
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacag-cttatgatattgttcataaattgttttcagcttat 165  Q
    |||||||||| |||||||| | ||||| ||||||||||  || ||| |||||| || |||| |  ||||| | |||||||||||||||||||||||||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgagacagtctggaagaacttataaaaaaaatcttataaaattgttcataaattgttttcagcttat 29628772  T
Q  166 ttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    |||||||||||   | ||||||||| ||| |||| |||||||    
T  29628773 ttccataaattttccaagatagcttatgagaacaacttatag 29628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 750809 - 750703
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 166  Q
    ||||||||||||||||| | ||||||  |||||||||| ||||||  |||||| ||||||| |||| |||| |||||||||||  |||||| ||||||||    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatt 750710  T
Q  167 tccataa 173  Q
    | |||||    
T  750709 tgcataa 750703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 36534885 - 36534797
Alignment:
Q  90 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 177  Q
    ||||| |||||||||| ||||||||| |||| ||||||||||||||| | |||||||||||  | |||||||||||||| ||| |||||    
T  36534885 cataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagcttattttcattaattc 36534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 42419937 - 42419853
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 146  Q
    |||||||||||||||||||||| | | ||||| |||| ||||| ||||||||||||| || ||||||||||||||| ||| ||||    
T  42419937 attgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 449987 - 449904
Alignment:
Q  67 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||||||||| ||||||||  |||||| |||| |||||||||||||||| || | |||||||||||||||| ||| |||||||    
T  449987 acttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataa 449904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 28677630 - 28677696
Alignment:
Q  107 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  28677630 tgtttgggagaacttatgaaaacagcttatgacatt-ttcataagttgttttcggcttatttccataa 28677696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 27317523 - 27317449
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 136  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||| |||||| |||||| |||||||||| ||||||    
T  27317523 attgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 8017542 - 8017440
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaa 193  Q
    ||||| |||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||| || ||||| ||||| ||   | ||||||||| |||||    
T  8017542 ttgtgcgattatttgggagaacttatgaaaacagcttatgata-tgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaa 8017444  T
Q  194 acag 197  Q
    ||||    
T  8017443 acag 8017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 5902476 - 5902576
Alignment:
Q  62 aattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttca 159  Q
    |||||||||||||||  |||||||  ||||||||   |||||||| ||||||| |||||| ||||||||||||||||| || ||||||||| ||||||||    
T  5902476 aattgacttatttgaacttatcta--ggcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacat-gttcataaactgttttca 5902572  T
Q  160 gctt 163  Q
    ||||    
T  5902573 gctt 5902576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 7928224 - 7928336
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatg-atattgttcataaattgttttcag 160  Q
    |||| |||||||||| |||||||  | ||||| || ||||||| |||| |  |||||| | |||||||||||||| | ||||||||||| ||||||||||    
T  7928224 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagttgttttcag 7928323  T
Q  161 cttatttccataa 173  Q
    ||||||| |||||    
T  7928324 cttattttcataa 7928336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 39073621 - 39073685
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 120  Q
    |||||| ||||| ||||||||||| |||||||| ||||| |||||||||| ||||||| ||||||    
T  39073621 tgtttagattgatttatttgagttcatctaccgacataatttttgtgagactgtttggaagaact 39073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 40279512 - 40279440
Alignment:
Q  101 tgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| ||||||||||||||||||||||| ||| | | ||||| |||||| |||||||| ||||||| |||||    
T  40279512 tgagactgtttgggagaactatgaaaacaacttttaacattgtccataaactgttttcaacttattttcataa 40279440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 4607069 - 4606958
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||||||   |||| |||||||||| | ||||||||||| | |||||||| ||||||| ||||||||| |  || ||| |||    
T  4607069 attggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagc 4606970  T
Q  162 ttatttccataa 173  Q
    |||||| |||||    
T  4606969 ttattttcataa 4606958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 5365514 - 5365608
Alignment:
Q  72 tttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||||||||||  |||||| ||||||  ||||||||| ||| ||| |  | ||||||| ||| ||||||||||| |||||||||||||||||    
T  5365514 tttgagtttatctactagcataagttttgtatgattgtttgagaggact-tatagacagcttttgacattgttcataagttgttttcagcttattt 5365608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 23974419 - 23974494
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    ||||||||||||| |||||||||| | ||| |  || |||||||||||| ||||||| ||||||||||||||||||    
T  23974419 attgacttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatga 23974494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 30331895 - 30331820
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||||||||| || |||||||| | ||||| |||||||||| ||||||||||||| |||||||| | |||||||    
T  30331895 attgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatga 30331820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 42659142 - 42659212
Alignment:
Q  68 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatga 137  Q
    |||||||||| |||| ||| ||||||| |||||||||| ||||||||||||  | ||||||||||||||||    
T  42659142 cttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatga 42659212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 16451226 - 16451157
Alignment:
Q  99 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||  ||||||||||||| ||||||||| ||||||| ||||||||| |  ||||||||||||||||    
T  16451226 tgtgagaccgtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattt 16451157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 26143568 - 26143708
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| ||| |||||| |||||||| | |||||||||||  ||| |||||||||||||| | ||||||| ||||||  |||||||| |  || ||||||||    
T  26143568 attggcttgtttgagcttatctactgacataaattttg--agactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagc 26143665  T
Q  162 ttatttccataaatt---ccagatagcttgtgaaaacagctta 201  Q
    |||||| ||||| ||   | || |||||| |||||||||||||    
T  26143666 ttattttcataagttctccaagttagcttatgaaaacagctta 26143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 29316764 - 29316846
Alignment:
Q  124 aaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaacagcttatag 204  Q
    |||||||||||||| || |||||||| || |||||||||||||||||||| ||   | ||||||||  ||||||||||||||||    
T  29316764 aaaacagcttatgacat-gttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatag 29316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 3611362 - 3611232
Alignment:
Q  71 atttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaa-cagcttatgatattgttcataaattgttttcagcttatttcc 169  Q
    ||||||||||| ||||   ||||| ||| || ||| |||||||||||  || ||||| || ||||||| ||| |||||||| |||||| ||||||||| |    
T  3611362 atttgagtttaactactatcataagtttcgtaagactgtttgggagatttacgaaaaacaacttatgacattattcataaactgtttttagcttattttc 3611263  T
Q  170 ataaattcc---agatagcttgtgaaaacag 197  Q
    |||| |||    |||||||||||||||||||    
T  3611262 ataagttctccaagatagcttgtgaaaacag 3611232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 12313135 - 12313210
Alignment:
Q  98 ttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||||||  |||||||||||||||||  | ||||||||| ||| ||||| ||||||| |||||    
T  12313135 ttgtgagattgtttgggagaatttatgaaaacagcttatgcca-tgttcataagttgatttcaccttattttcataa 12313210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 2416464 - 2416373
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 146  Q
    |||||| ||||||||||||||||||||||||   ||||| |||||||| | || |||| ||||| ||| |||||||||| ||  ||||||||    
T  2416464 tgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttca 2416373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 6561488 - 6561449
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaa 95  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  6561488 tgtttgaattgacttatttgagtttatctacgggcataaa 6561449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 26626969 - 26626876
Alignment:
Q  111 tgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaacagctt 200  Q
    |||||||||| | ||||| ||||||||| |||||||||||  ||||||||| |||||| ||||| ||   | ||||||||| ||||||||||||    
T  26626969 tgggagaacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagctt 26626876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 41812018 - 41812125
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagc 161  Q
    |||| |||||||||| |||||| | | || || ||| |||||  |||||||||||||| | ||||||||||||||| ||| |||||||  | |||||| |    
T  41812018 attggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttttttcaac 41812117  T
Q  162 ttatttcc 169  Q
    ||||||||    
T  41812118 ttatttcc 41812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 10619146 - 10619220
Alignment:
Q  63 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatg 136  Q
    ||||||| |||||||||||||||| | || || ||||||||||    ||||||||||| ||||||||||||||||    
T  10619146 attgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatg 10619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 787440 - 787364
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 174  Q
    |||||| | |||||| ||||||| ||||||||||||||||| || || |||||  |||||||||||||| ||||||||    
T  787440 ttgtgacactgtttgtgagaacttatgaaaacagcttatgacat-gtccataagctgttttcagcttatctccataaa 787364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 1647321 - 1647269
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||| || | ||||||  ||||||||||||||||||||||    
T  1647321 tatgaaaacagcttatgacat-gctcataagctgttttcagcttatttccataa 1647269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 3235390 - 3235461
Alignment:
Q  142 gttcataaattgttttcagcttatttccataaa---ttccagatagcttgtgaaaacagcttatagtgtata 210  Q
    ||||||||  |||||||||||||||||||||||   ||| ||||||  | ||||||||||||||||| ||||    
T  3235390 gttcataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttatagtttata 3235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 19608567 - 19608664
Alignment:
Q  71 atttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 167  Q
    |||||||||||||||| | ||||  |||| ||||| |||||| |||||| ||| || ||||||||||| ||| |||||||  | |||| |||||||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagcttattt 19608664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 35379001 - 35379053
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||||||||||| ||||  |||||||||| ||||||||||||||||| |||||    
T  35379001 tatgaaaacagctgatgac-ttgttcataagttgttttcagcttattttcataa 35379053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 40279353 - 40279300
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||  |||||||||||| ||||||||||| |||| |||||    
T  40279353 tatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataa 40279300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 40279423 - 40279370
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||  |||||||||||| ||||||||||| |||| |||||    
T  40279423 tatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataa 40279370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 41817253 - 41817201
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||| || ||| |||| |||||||||||||||||||||||    
T  41817253 tatgaaaacatcttatgacat-gttgataatttgttttcagcttatttccataa 41817201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 43065435 - 43065487
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||| ||||||| || || |||||||||||||||||||||||| ||||    
T  43065435 tatgaaaacaacttatgacat-gtccataaattgttttcagcttatttcaataa 43065487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 1801776 - 1801736
Alignment:
Q  98 ttgtgagattgtttgggagaac-tatgaaaacagcttatga 137  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  1801776 ttgtgatattgtttgggagaacttatgaaaacagcttatga 1801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 7035520 - 7035604
Alignment:
Q  90 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    ||||| |||||||||| ||||| | |||||| ||| ||||||||||||| |  ||||||||  ||||||| |||||||| |||||    
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataa 7035604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 33256825 - 33256774
Alignment:
Q  120 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccata 172  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||||| ||||    
T  33256825 tatgaaaacagcttatgacat-gttcataaactgttctcagcttattttcata 33256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 35810016 - 35809980
Alignment:
Q  58 tttaaattgacttatttgagtttatctaccggcataa 94  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  35810016 tttagattgacttatttgagcttatctaccggcataa 35809980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 40158826 - 40158751
Alignment:
Q  98 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 173  Q
    |||||||| || ||||| ||||| ||||||||||||||||| | |||| |||| |||||||||||||| || |||||    
T  40158826 ttgtgagactgattgggggaacttatgaaaacagcttatgaca-tgtttataagttgttttcagcttaattacataa 40158751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 42420062 - 42420030
Alignment:
Q  141 tgttcataaattgttttcagcttatttccataa 173  Q
    |||||||||||||||||||||| ||||||||||    
T  42420062 tgttcataaattgttttcagctcatttccataa 42420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 44438826 - 44438873
Alignment:
Q  122 tgaaaacagcttatgatattgttcataaattgttttcagcttatttcca 170  Q
    |||||||||||||||| || ||||||||  |||||||||||||||||||    
T  44438826 tgaaaacagcttatgacat-gttcataacctgttttcagcttatttcca 44438873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 24759 - 24681
Alignment:
Q  69 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 146  Q
    |||||||||  ||||||  ||||||  |||||||||| ||||||||||||| ||| |||||||||||||| ||| ||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacattcttca 24681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 918 - 995
Alignment:
Q  73 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 149  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 33832 - 33893
Alignment:
Q  56 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga 117  Q
    ||||||||||||||||||||| ||||||||| | |||||  | | ||||||||||| |||||    
T  33832 tgtttaaattgacttatttgaatttatctactgacataagctctttgagattgtttaggaga 33893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University