View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9230_low_8 (Length: 252)
Name: NF9230_low_8
Description: NF9230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9230_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 34929633 - 34929869
Alignment:
| Q |
16 |
tacttccgtacagcataattaggtgtatatatatgcttaatttaaattcataaataaataagatttgattaagacaagattatagacaaggagagtttga |
115 |
Q |
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| T |
34929633 |
tacttccgtacagcataattaggtgtatatatatgcttaatttaaattcataaataaataagatttgattaagacaagattatagaaaaggagagtttga |
34929732 |
T |
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| Q |
116 |
aaaatgaattcattggggaaaaaggaggagaaagtgtcctatagctattctacaaatataaaaacaaggtttatannnnnnnnnnacggaaaaataaggt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34929733 |
aaaatgaattcattggggaaaaaggaggagaaagtgtcctatagctattctacaaatataaaaacaaggtttatattttttttttacggaaaaataaggt |
34929832 |
T |
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| Q |
216 |
ttatatagtgacctaataatctacgattttagtatcc |
252 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
34929833 |
ttatatagtgacctaataatctacgattttagtatcc |
34929869 |
T |
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