View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9237_high_3 (Length: 240)

Name: NF9237_high_3
Description: NF9237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9237_high_3
NF9237_high_3
[»] chr4 (77 HSPs)
chr4 (1-102)||(50052428-50052529)
chr4 (1-102)||(48183049-48183150)
chr4 (1-101)||(11511462-11511562)
chr4 (1-102)||(480447-480548)
chr4 (1-101)||(6034044-6034144)
chr4 (1-101)||(41236347-41236447)
chr4 (1-107)||(29234245-29234351)
chr4 (1-102)||(42044367-42044468)
chr4 (3-101)||(54473535-54473633)
chr4 (1-102)||(29239885-29239986)
chr4 (1-101)||(3481654-3481754)
chr4 (1-101)||(50526171-50526271)
chr4 (1-101)||(31910192-31910292)
chr4 (1-102)||(24995107-24995208)
chr4 (1-102)||(23608234-23608335)
chr4 (1-107)||(29977879-29977985)
chr4 (1-101)||(40574779-40574879)
chr4 (1-102)||(55475190-55475291)
chr4 (1-102)||(19670716-19670817)
chr4 (1-102)||(32766957-32767058)
chr4 (102-167)||(41760008-41760073)
chr4 (1-109)||(47986200-47986308)
chr4 (1-96)||(53352566-53352660)
chr4 (1-63)||(41823920-41823982)
chr4 (1-103)||(50813892-50813994)
chr4 (102-162)||(3716324-3716384)
chr4 (1-81)||(17983743-17983823)
chr4 (102-162)||(48579256-48579316)
chr4 (3-102)||(29547961-29548060)
chr4 (102-164)||(28037682-28037744)
chr4 (1-103)||(28480268-28480370)
chr4 (1-103)||(28481143-28481245)
chr4 (1-103)||(28482018-28482120)
chr4 (102-152)||(52589080-52589130)
chr4 (1-102)||(48647726-48647827)
chr4 (36-101)||(55079749-55079814)
chr4 (1-101)||(8343163-8343263)
chr4 (102-161)||(27538915-27538974)
chr4 (102-161)||(34280576-34280635)
chr4 (102-161)||(51436161-51436220)
chr4 (102-164)||(30342822-30342884)
chr4 (102-162)||(30539568-30539628)
chr4 (102-161)||(14802712-14802771)
chr4 (102-157)||(36592382-36592437)
chr4 (102-161)||(47302029-47302088)
chr4 (102-161)||(52809291-52809350)
chr4 (102-168)||(13548751-13548817)
chr4 (33-102)||(47104543-47104612)
chr4 (102-166)||(43137712-43137776)
chr4 (116-164)||(46004685-46004733)
chr4 (102-161)||(36091059-36091118)
chr4 (1-104)||(44536746-44536848)
chr4 (111-158)||(47302399-47302446)
chr4 (102-161)||(48066352-48066411)
chr4 (102-161)||(53389194-53389253)
chr4 (102-161)||(55722476-55722535)
chr4 (102-148)||(46041714-46041760)
chr4 (111-161)||(46216128-46216178)
chr4 (126-163)||(52940478-52940515)
chr4 (102-162)||(18425465-18425525)
chr4 (28-96)||(18769114-18769182)
chr4 (1-93)||(29589740-29589831)
chr4 (102-161)||(1414446-1414505)
chr4 (102-161)||(29646624-29646683)
chr4 (102-161)||(37855121-37855180)
chr4 (102-165)||(38835848-38835911)
chr4 (102-161)||(52324314-52324373)
chr4 (126-168)||(19842431-19842473)
chr4 (33-75)||(27550434-27550475)
chr4 (102-164)||(39380746-39380808)
chr4 (103-165)||(40438983-40439045)
chr4 (36-81)||(18924530-18924575)
chr4 (126-159)||(45024862-45024895)
chr4 (101-164)||(423147-423211)
chr4 (129-161)||(5474384-5474416)
chr4 (104-148)||(9381046-9381090)
chr4 (102-165)||(53936859-53936923)
[»] chr5 (66 HSPs)
chr5 (1-104)||(2740271-2740374)
chr5 (1-98)||(18520884-18520981)
chr5 (1-102)||(36732942-36733043)
chr5 (1-101)||(40145407-40145507)
chr5 (1-102)||(13811651-13811752)
chr5 (1-101)||(14831814-14831914)
chr5 (1-101)||(28177775-28177875)
chr5 (1-101)||(33149638-33149738)
chr5 (3-101)||(42414304-42414402)
chr5 (1-101)||(35785199-35785299)
chr5 (1-104)||(6679695-6679798)
chr5 (5-102)||(15409614-15409711)
chr5 (1-101)||(35943892-35943992)
chr5 (1-102)||(31008987-31009088)
chr5 (1-101)||(26720516-26720616)
chr5 (1-101)||(26990265-26990365)
chr5 (1-103)||(2252168-2252270)
chr5 (10-106)||(41470425-41470521)
chr5 (1-102)||(3921265-3921366)
chr5 (1-100)||(36875612-36875702)
chr5 (1-109)||(6260001-6260109)
chr5 (102-158)||(13410545-13410601)
chr5 (1-101)||(20073516-20073616)
chr5 (1-101)||(33825324-33825424)
chr5 (102-161)||(6114121-6114180)
chr5 (3-100)||(16327902-16327999)
chr5 (38-96)||(10356639-10356698)
chr5 (102-165)||(21605644-21605707)
chr5 (111-160)||(2318782-2318831)
chr5 (102-159)||(6560828-6560885)
chr5 (1-102)||(9603812-9603913)
chr5 (1-102)||(39688897-39688998)
chr5 (102-162)||(2029352-2029412)
chr5 (102-162)||(43237700-43237760)
chr5 (102-161)||(1662041-1662100)
chr5 (102-161)||(6532579-6532638)
chr5 (111-158)||(27116465-27116512)
chr5 (102-161)||(34302646-34302705)
chr5 (102-161)||(42917117-42917176)
chr5 (3-49)||(31132396-31132442)
chr5 (1-102)||(38296202-38296303)
chr5 (102-166)||(2141237-2141301)
chr5 (105-161)||(29743895-29743951)
chr5 (102-161)||(4618059-4618118)
chr5 (116-163)||(36409904-36409951)
chr5 (33-103)||(2614555-2614624)
chr5 (102-152)||(18228806-18228856)
chr5 (102-164)||(36752557-36752619)
chr5 (102-162)||(12362705-12362765)
chr5 (1-57)||(21370048-21370104)
chr5 (102-161)||(15725844-15725903)
chr5 (106-161)||(16433002-16433057)
chr5 (116-159)||(34064960-34065003)
chr5 (102-161)||(35162351-35162410)
chr5 (12-75)||(41334597-41334659)
chr5 (102-152)||(3056394-3056444)
chr5 (105-159)||(33145210-33145264)
chr5 (102-163)||(9534868-9534929)
chr5 (36-81)||(10227929-10227974)
chr5 (102-163)||(13795617-13795678)
chr5 (1-78)||(39557517-39557594)
chr5 (102-161)||(480021-480081)
chr5 (116-164)||(6335387-6335435)
chr5 (102-162)||(21051651-21051711)
chr5 (102-158)||(23408255-23408311)
chr5 (111-162)||(28332119-28332171)
[»] chr1 (86 HSPs)
chr1 (1-102)||(2581914-2582015)
chr1 (1-104)||(51898683-51898786)
chr1 (1-101)||(9474876-9474976)
chr1 (1-101)||(27564735-27564835)
chr1 (1-101)||(3000319-3000419)
chr1 (1-107)||(44548376-44548482)
chr1 (3-101)||(48716284-48716382)
chr1 (1-102)||(32813246-32813347)
chr1 (1-102)||(38595153-38595254)
chr1 (1-106)||(50630453-50630558)
chr1 (1-101)||(47452320-47452420)
chr1 (3-102)||(38632323-38632422)
chr1 (1-102)||(8346388-8346489)
chr1 (1-101)||(43132-43232)
chr1 (2-101)||(37649198-37649297)
chr1 (1-103)||(41758803-41758905)
chr1 (1-100)||(11152378-11152476)
chr1 (1-102)||(45044560-45044661)
chr1 (1-102)||(49811527-49811628)
chr1 (1-106)||(50591000-50591105)
chr1 (3-102)||(23597093-23597192)
chr1 (1-71)||(13414791-13414861)
chr1 (1-102)||(5959000-5959101)
chr1 (1-94)||(26440741-26440834)
chr1 (3-107)||(26274426-26274530)
chr1 (1-101)||(41608493-41608593)
chr1 (102-163)||(37498742-37498803)
chr1 (1-101)||(3302533-3302633)
chr1 (102-161)||(922189-922248)
chr1 (102-161)||(31931045-31931104)
chr1 (102-164)||(8461873-8461935)
chr1 (1-103)||(37926438-37926540)
chr1 (1-101)||(6260870-6260970)
chr1 (102-162)||(39190904-39190964)
chr1 (102-161)||(27295058-27295117)
chr1 (102-161)||(35305151-35305210)
chr1 (102-161)||(45423609-45423668)
chr1 (102-161)||(50905581-50905640)
chr1 (102-168)||(18641881-18641947)
chr1 (3-96)||(44453984-44454077)
chr1 (1-101)||(47748443-47748542)
chr1 (102-158)||(51781451-51781507)
chr1 (102-161)||(16482576-16482635)
chr1 (102-161)||(41073270-41073329)
chr1 (102-165)||(48616794-48616857)
chr1 (104-163)||(51369327-51369386)
chr1 (102-164)||(5956874-5956936)
chr1 (102-152)||(51519791-51519841)
chr1 (111-164)||(633004-633057)
chr1 (1-74)||(48489328-48489400)
chr1 (111-159)||(26011298-26011346)
chr1 (117-161)||(33099017-33099061)
chr1 (102-161)||(28493810-28493869)
chr1 (102-161)||(34256453-34256512)
chr1 (102-161)||(46771079-46771138)
chr1 (118-152)||(6520348-6520382)
chr1 (6-76)||(44334175-44334245)
chr1 (102-159)||(51984936-51984993)
chr1 (102-158)||(23056768-23056824)
chr1 (102-162)||(39971616-39971676)
chr1 (102-162)||(44978868-44978928)
chr1 (104-152)||(45673336-45673384)
chr1 (12-75)||(750239-750301)
chr1 (126-161)||(8096968-8097003)
chr1 (102-161)||(9166873-9166932)
chr1 (102-161)||(38262481-38262540)
chr1 (102-164)||(46362367-46362430)
chr1 (102-161)||(52303013-52303072)
chr1 (102-164)||(2247064-2247126)
chr1 (102-160)||(44246345-44246403)
chr1 (33-106)||(4401453-4401525)
chr1 (102-167)||(7121951-7122016)
chr1 (102-159)||(11778983-11779040)
chr1 (111-168)||(33906312-33906369)
chr1 (117-161)||(34038526-34038571)
chr1 (120-160)||(42275701-42275742)
chr1 (102-159)||(51184044-51184101)
chr1 (102-162)||(51787815-51787876)
chr1 (114-161)||(24230929-24230977)
chr1 (102-161)||(25493498-25493558)
chr1 (102-158)||(26102820-26102876)
chr1 (102-161)||(35874285-35874345)
chr1 (126-158)||(43146422-43146454)
chr1 (103-162)||(44382364-44382424)
chr1 (116-160)||(50534245-50534289)
chr1 (126-162)||(51873645-51873681)
[»] chr3 (79 HSPs)
chr3 (1-101)||(53982011-53982111)
chr3 (1-101)||(33644200-33644300)
chr3 (1-102)||(49607413-49607514)
chr3 (1-96)||(52629305-52629400)
chr3 (1-102)||(27714891-27714992)
chr3 (1-102)||(54868895-54868996)
chr3 (1-101)||(8076393-8076493)
chr3 (1-100)||(31456690-31456789)
chr3 (1-103)||(17470403-17470505)
chr3 (1-101)||(26141532-26141632)
chr3 (1-102)||(11095355-11095454)
chr3 (1-97)||(48587091-48587187)
chr3 (1-102)||(33118851-33118952)
chr3 (1-101)||(14623839-14623939)
chr3 (1-104)||(24699954-24700057)
chr3 (1-102)||(11347922-11348023)
chr3 (1-102)||(41189764-41189865)
chr3 (1-101)||(20764915-20765015)
chr3 (1-101)||(51419360-51419460)
chr3 (1-100)||(13898055-13898154)
chr3 (1-96)||(26754700-26754795)
chr3 (4-103)||(35536624-35536723)
chr3 (1-103)||(9562997-9563099)
chr3 (16-102)||(36707439-36707525)
chr3 (4-103)||(8956760-8956859)
chr3 (1-97)||(30801733-30801829)
chr3 (1-101)||(47531865-47531965)
chr3 (102-161)||(42067579-42067638)
chr3 (1-103)||(48375706-48375808)
chr3 (1-102)||(11907370-11907471)
chr3 (102-162)||(38785429-38785489)
chr3 (1-101)||(41080709-41080807)
chr3 (102-161)||(876569-876628)
chr3 (102-161)||(11140247-11140306)
chr3 (102-161)||(29786944-29787003)
chr3 (102-161)||(42364274-42364333)
chr3 (32-107)||(21746212-21746289)
chr3 (1-79)||(36331329-36331407)
chr3 (102-164)||(44670605-44670667)
chr3 (33-102)||(35965806-35965875)
chr3 (111-163)||(19547487-19547539)
chr3 (102-158)||(29347607-29347663)
chr3 (1-101)||(45058553-45058652)
chr3 (102-161)||(27079726-27079785)
chr3 (102-161)||(27082693-27082752)
chr3 (102-161)||(31308877-31308936)
chr3 (102-161)||(35171540-35171599)
chr3 (102-161)||(39630238-39630297)
chr3 (102-161)||(40650067-40650126)
chr3 (102-152)||(379224-379274)
chr3 (102-162)||(25592353-25592413)
chr3 (111-163)||(43715104-43715156)
chr3 (102-162)||(42848553-42848615)
chr3 (102-161)||(44365621-44365680)
chr3 (102-161)||(45636089-45636148)
chr3 (102-161)||(47470428-47470487)
chr3 (112-158)||(7671806-7671852)
chr3 (1-98)||(25407147-25407245)
chr3 (111-161)||(27647478-27647528)
chr3 (111-165)||(53516937-53516991)
chr3 (1-94)||(35093592-35093685)
chr3 (39-104)||(36331416-36331481)
chr3 (4-93)||(39670019-39670108)
chr3 (1-102)||(1758456-1758559)
chr3 (103-162)||(8965914-8965974)
chr3 (111-163)||(14998506-14998558)
chr3 (116-163)||(24397372-24397419)
chr3 (1-96)||(42823116-42823211)
chr3 (102-161)||(47948742-47948801)
chr3 (111-161)||(21289169-21289219)
chr3 (126-168)||(28146686-28146728)
chr3 (102-163)||(40021077-40021139)
chr3 (118-159)||(39540673-39540714)
chr3 (102-161)||(16136969-16137029)
chr3 (36-96)||(25395368-25395428)
chr3 (102-161)||(26409966-26410026)
chr3 (102-161)||(26885318-26885378)
chr3 (102-161)||(42622196-42622256)
chr3 (31-75)||(52629951-52629994)
[»] chr8 (70 HSPs)
chr8 (1-103)||(37038477-37038579)
chr8 (1-101)||(12831047-12831147)
chr8 (1-101)||(15197333-15197433)
chr8 (1-102)||(14547921-14548022)
chr8 (1-101)||(504121-504221)
chr8 (1-100)||(5957831-5957930)
chr8 (1-101)||(23122597-23122697)
chr8 (1-101)||(34012296-34012396)
chr8 (1-101)||(40423943-40424043)
chr8 (1-101)||(1179940-1180040)
chr8 (1-101)||(15048182-15048281)
chr8 (1-103)||(44507087-44507189)
chr8 (1-102)||(10284631-10284732)
chr8 (1-96)||(10621087-10621182)
chr8 (1-81)||(8841432-8841512)
chr8 (1-101)||(43414581-43414681)
chr8 (1-102)||(4854863-4854964)
chr8 (1-102)||(16383376-16383477)
chr8 (1-102)||(34307215-34307316)
chr8 (1-102)||(42221514-42221615)
chr8 (33-101)||(20074966-20075034)
chr8 (1-102)||(16056401-16056502)
chr8 (1-102)||(24307793-24307894)
chr8 (1-100)||(9122196-9122285)
chr8 (102-161)||(15726237-15726296)
chr8 (1-104)||(17443822-17443925)
chr8 (102-161)||(29773445-29773504)
chr8 (1-101)||(30479474-30479574)
chr8 (18-101)||(14055609-14055692)
chr8 (102-161)||(14498650-14498709)
chr8 (102-161)||(36002356-36002415)
chr8 (1-102)||(15258929-15259030)
chr8 (38-102)||(24307628-24307692)
chr8 (102-162)||(28090191-28090251)
chr8 (102-166)||(37511083-37511147)
chr8 (102-162)||(43049536-43049596)
chr8 (102-161)||(945976-946035)
chr8 (102-161)||(19718698-19718757)
chr8 (102-161)||(23286565-23286624)
chr8 (102-161)||(29229524-29229583)
chr8 (1-108)||(32032718-32032824)
chr8 (102-161)||(38502184-38502243)
chr8 (102-165)||(44934895-44934958)
chr8 (102-167)||(17642068-17642133)
chr8 (32-101)||(30183906-30183975)
chr8 (102-161)||(37465684-37465743)
chr8 (118-161)||(39347493-39347536)
chr8 (102-161)||(42444565-42444624)
chr8 (33-103)||(11582891-11582960)
chr8 (123-161)||(29459633-29459671)
chr8 (102-164)||(34332109-34332171)
chr8 (207-240)||(6850387-6850420)
chr8 (102-164)||(10280555-10280619)
chr8 (102-163)||(34047764-34047825)
chr8 (116-161)||(40154489-40154534)
chr8 (102-166)||(6800119-6800183)
chr8 (102-162)||(37161503-37161563)
chr8 (102-161)||(2273010-2273069)
chr8 (102-161)||(2666505-2666564)
chr8 (46-109)||(25838189-25838252)
chr8 (12-75)||(29705466-29705528)
chr8 (103-161)||(27847458-27847516)
chr8 (117-166)||(5215683-5215732)
chr8 (116-161)||(17096642-17096687)
chr8 (102-163)||(32071591-32071652)
chr8 (116-165)||(34058191-34058240)
chr8 (102-159)||(36886509-36886566)
chr8 (111-162)||(26439879-26439931)
chr8 (117-165)||(35970685-35970733)
chr8 (1-101)||(38229429-38229528)
[»] chr7 (72 HSPs)
chr7 (1-103)||(3434560-3434662)
chr7 (1-102)||(7389388-7389489)
chr7 (1-101)||(19329842-19329942)
chr7 (1-103)||(36361913-36362015)
chr7 (1-102)||(8080383-8080484)
chr7 (1-101)||(38267040-38267140)
chr7 (1-103)||(36362024-36362126)
chr7 (1-102)||(19436187-19436288)
chr7 (1-102)||(38837216-38837317)
chr7 (1-101)||(35137533-35137633)
chr7 (1-98)||(3783998-3784095)
chr7 (1-101)||(4999514-4999614)
chr7 (1-102)||(40957706-40957807)
chr7 (7-101)||(46374808-46374902)
chr7 (1-101)||(21234401-21234501)
chr7 (1-100)||(32951493-32951592)
chr7 (1-98)||(3694370-3694467)
chr7 (1-101)||(8238212-8238313)
chr7 (1-102)||(18207179-18207279)
chr7 (1-96)||(35522881-35522976)
chr7 (1-102)||(38044196-38044297)
chr7 (1-101)||(39255924-39256023)
chr7 (1-102)||(11044187-11044278)
chr7 (1-103)||(22343359-22343461)
chr7 (1-103)||(41915739-41915841)
chr7 (9-103)||(46033809-46033903)
chr7 (1-102)||(36208172-36208273)
chr7 (1-101)||(40846113-40846213)
chr7 (102-161)||(41913441-41913500)
chr7 (1-101)||(32564426-32564526)
chr7 (1-103)||(26296642-26296744)
chr7 (1-102)||(35468855-35468956)
chr7 (104-165)||(41331725-41331786)
chr7 (35-102)||(10343597-10343664)
chr7 (1-101)||(31735884-31735977)
chr7 (1-102)||(7727905-7728006)
chr7 (102-158)||(1691338-1691394)
chr7 (102-162)||(3909927-3909987)
chr7 (102-162)||(21699636-21699696)
chr7 (102-158)||(28326684-28326740)
chr7 (102-166)||(31903432-31903496)
chr7 (102-166)||(45458693-45458757)
chr7 (102-161)||(23331700-23331759)
chr7 (102-161)||(30862789-30862848)
chr7 (102-168)||(9682373-9682439)
chr7 (9-101)||(41423682-41423774)
chr7 (111-163)||(43750073-43750125)
chr7 (1-96)||(2318243-2318338)
chr7 (102-165)||(40941871-40941934)
chr7 (1-71)||(16374824-16374894)
chr7 (33-103)||(24000918-24000987)
chr7 (32-102)||(45223041-45223111)
chr7 (102-168)||(47748149-47748215)
chr7 (105-162)||(27956376-27956433)
chr7 (102-162)||(18990090-18990150)
chr7 (102-166)||(30624070-30624134)
chr7 (105-161)||(41381497-41381553)
chr7 (33-101)||(42538339-42538406)
chr7 (102-161)||(42710931-42710990)
chr7 (102-165)||(44964168-44964231)
chr7 (102-161)||(45857821-45857880)
chr7 (1-67)||(27744309-27744375)
chr7 (111-161)||(27800384-27800434)
chr7 (33-75)||(41861801-41861842)
chr7 (116-161)||(1343019-1343064)
chr7 (116-161)||(12395194-12395239)
chr7 (116-161)||(25411987-25412032)
chr7 (102-162)||(30891277-30891338)
chr7 (102-167)||(43069074-43069139)
chr7 (113-161)||(22904850-22904898)
chr7 (102-162)||(38129732-38129792)
chr7 (101-161)||(42974895-42974955)
[»] chr2 (69 HSPs)
chr2 (1-107)||(9058474-9058580)
chr2 (1-103)||(28863453-28863555)
chr2 (1-102)||(33436100-33436201)
chr2 (1-104)||(7465735-7465838)
chr2 (1-103)||(32505648-32505750)
chr2 (1-102)||(10249382-10249483)
chr2 (1-101)||(13438343-13438443)
chr2 (1-101)||(17473020-17473120)
chr2 (1-103)||(5574488-5574590)
chr2 (1-102)||(20700814-20700915)
chr2 (1-102)||(30915462-30915563)
chr2 (1-101)||(40613902-40614002)
chr2 (1-101)||(40701478-40701578)
chr2 (1-98)||(19930820-19930917)
chr2 (1-101)||(27864704-27864804)
chr2 (1-101)||(28381655-28381755)
chr2 (1-102)||(38273142-38273243)
chr2 (1-101)||(4060685-4060785)
chr2 (1-102)||(38882811-38882914)
chr2 (3-104)||(2533121-2533221)
chr2 (1-102)||(42257192-42257293)
chr2 (1-102)||(45097735-45097836)
chr2 (1-103)||(33436209-33436311)
chr2 (1-102)||(26891504-26891605)
chr2 (102-166)||(3383534-3383598)
chr2 (102-168)||(5091990-5092056)
chr2 (1-107)||(17820004-17820110)
chr2 (1-103)||(36168834-36168936)
chr2 (1-100)||(41575138-41575238)
chr2 (3-101)||(43490121-43490219)
chr2 (102-163)||(11227625-11227686)
chr2 (1-81)||(2997487-2997567)
chr2 (1-101)||(38732354-38732454)
chr2 (102-161)||(4673949-4674008)
chr2 (1-95)||(3439985-3440079)
chr2 (102-159)||(6884161-6884218)
chr2 (102-167)||(38963411-38963476)
chr2 (102-158)||(11813544-11813600)
chr2 (32-102)||(17823783-17823853)
chr2 (102-159)||(5389548-5389605)
chr2 (102-159)||(33423363-33423420)
chr2 (102-163)||(34438533-34438594)
chr2 (102-159)||(34665573-34665630)
chr2 (102-163)||(42427918-42427979)
chr2 (104-160)||(42046076-42046132)
chr2 (102-161)||(14533169-14533228)
chr2 (104-161)||(1353507-1353564)
chr2 (1-58)||(3737986-3738043)
chr2 (1-81)||(13365373-13365453)
chr2 (102-158)||(37083211-37083267)
chr2 (102-161)||(58920-58979)
chr2 (102-165)||(15771657-15771720)
chr2 (36-102)||(15428775-15428841)
chr2 (102-161)||(39620191-39620251)
chr2 (111-161)||(11598114-11598165)
chr2 (102-161)||(40288051-40288110)
chr2 (116-162)||(7069193-7069239)
chr2 (120-162)||(7467119-7467161)
chr2 (102-164)||(12547361-12547423)
chr2 (116-161)||(18576672-18576718)
chr2 (31-93)||(41758593-41758655)
chr2 (33-75)||(43490335-43490376)
chr2 (116-161)||(4108307-4108352)
chr2 (102-159)||(8371913-8371970)
chr2 (102-166)||(15206083-15206148)
chr2 (102-159)||(15426370-15426427)
chr2 (102-158)||(5615378-5615434)
chr2 (118-158)||(12071158-12071198)
chr2 (102-162)||(32499149-32499209)
[»] chr6 (43 HSPs)
chr6 (1-101)||(32869678-32869778)
chr6 (1-98)||(22880658-22880755)
chr6 (1-101)||(17598554-17598654)
chr6 (1-103)||(11427614-11427718)
chr6 (1-103)||(31976246-31976348)
chr6 (1-102)||(6209465-6209566)
chr6 (1-101)||(31109400-31109500)
chr6 (1-102)||(31110761-31110860)
chr6 (1-101)||(29857827-29857927)
chr6 (1-97)||(28536488-28536582)
chr6 (1-107)||(15990042-15990148)
chr6 (1-98)||(23128127-23128224)
chr6 (1-102)||(30341360-30341461)
chr6 (1-101)||(15508024-15508124)
chr6 (1-101)||(31953030-31953130)
chr6 (1-101)||(4231548-4231648)
chr6 (1-100)||(946377-946476)
chr6 (12-102)||(15832576-15832666)
chr6 (33-96)||(9379744-9379807)
chr6 (36-103)||(22422053-22422120)
chr6 (102-161)||(24212912-24212971)
chr6 (102-159)||(2258905-2258962)
chr6 (102-159)||(4901296-4901353)
chr6 (33-102)||(12732481-12732550)
chr6 (102-159)||(17545607-17545664)
chr6 (102-161)||(8401763-8401822)
chr6 (102-161)||(13390385-13390444)
chr6 (102-161)||(26315447-26315506)
chr6 (102-161)||(26358900-26358959)
chr6 (102-163)||(6848508-6848569)
chr6 (102-151)||(24487634-24487683)
chr6 (118-161)||(10888173-10888216)
chr6 (102-161)||(15383551-15383610)
chr6 (102-161)||(32834121-32834180)
chr6 (116-166)||(7344677-7344727)
chr6 (118-159)||(926542-926583)
chr6 (33-102)||(9698240-9698308)
chr6 (1-57)||(30870058-30870114)
chr6 (102-165)||(11446732-11446795)
chr6 (116-161)||(14501026-14501071)
chr6 (116-160)||(8376385-8376429)
chr6 (117-161)||(11273779-11273823)
chr6 (66-102)||(28536678-28536714)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-101)||(929-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-101)||(929-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-102)||(10109-10210)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-101)||(4029-4129)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-107)||(8863-8969)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-81)||(152518-152598)
[»] scaffold0005 (1 HSPs)
scaffold0005 (102-161)||(36956-37015)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-78)||(17077-17154)
[»] scaffold0113 (1 HSPs)
scaffold0113 (111-163)||(29243-29295)
[»] scaffold0625 (1 HSPs)
scaffold0625 (102-162)||(6610-6670)
[»] scaffold0604 (1 HSPs)
scaffold0604 (111-159)||(2022-2070)
[»] scaffold0077 (1 HSPs)
scaffold0077 (102-138)||(48033-48069)
[»] scaffold0184 (1 HSPs)
scaffold0184 (102-166)||(16929-16994)
[»] scaffold0078 (1 HSPs)
scaffold0078 (102-166)||(55850-55915)


Alignment Details
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50052428 - 50052529
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052428 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 50052527  T
Q  101 ct 102  Q
    ||    
T  50052528 ct 50052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48183049 - 48183150
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  48183049 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattact 48183148  T
Q  101 ct 102  Q
    ||    
T  48183149 ct 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11511462 - 11511562
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11511462 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 11511561  T
Q  101 c 101  Q
    |    
T  11511562 c 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 480447 - 480548
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  480447 agaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattact 480546  T
Q  101 ct 102  Q
    ||    
T  480547 ct 480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6034144 - 6034044
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6034144 agaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 6034045  T
Q  101 c 101  Q
    |    
T  6034044 c 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41236447 - 41236347
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  41236447 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattact 41236348  T
Q  101 c 101  Q
    |    
T  41236347 c 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29234245 - 29234351
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  29234245 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattact 29234344  T
Q  101 ctaattt 107  Q
    |||||||    
T  29234345 ctaattt 29234351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42044367 - 42044468
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||| ||||||||||||||||||    
T  42044367 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattact 42044466  T
Q  101 ct 102  Q
    ||    
T  42044467 ct 42044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 54473535 - 54473633
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  54473535 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29239986 - 29239885
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  29239986 agaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattact 29239887  T
Q  101 ct 102  Q
    ||    
T  29239886 ct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3481754 - 3481654
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  3481754 agaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattact 3481655  T
Q  101 c 101  Q
    |    
T  3481654 c 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 50526171 - 50526271
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50526171 agaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 50526270  T
Q  101 c 101  Q
    |    
T  50526271 c 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31910292 - 31910192
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |||    
T  31910292 agaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataact 31910193  T
Q  101 c 101  Q
    |    
T  31910192 c 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24995107 - 24995208
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| |||| || ||||||||||    
T  24995107 agaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattact 24995206  T
Q  101 ct 102  Q
    ||    
T  24995207 ct 24995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23608335 - 23608234
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||| ||||||| ||||||||||    
T  23608335 agaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattact 23608236  T
Q  101 ct 102  Q
    ||    
T  23608235 ct 23608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29977985 - 29977879
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||| || ||||||||||||||||| || | | ||||||||||||||    
T  29977985 agaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattact 29977886  T
Q  101 ctaattt 107  Q
    || ||||    
T  29977885 cttattt 29977879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40574879 - 40574779
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| |||| |||| ||  |  |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  40574879 agaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataact 40574780  T
Q  101 c 101  Q
    |    
T  40574779 c 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 55475291 - 55475190
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||| ||| |||||||  || | || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  55475291 agaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataact 55475192  T
Q  101 ct 102  Q
    ||    
T  55475191 ct 55475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19670716 - 19670817
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| || ||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  19670716 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 19670815  T
Q  101 ct 102  Q
    ||    
T  19670816 ct 19670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32767058 - 32766957
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||||||| |||||||  || | || ||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||    
T  32767058 agaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataact 32766959  T
Q  101 ct 102  Q
    ||    
T  32766958 ct 32766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 41760008 - 41760073
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 167  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41760008 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgccaaattt 41760073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 47986308 - 47986200
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| ||| |||||| || ||||||||||||||||| ||| |||||||||| |||    
T  47986308 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataact 47986209  T
Q  101 ctaatttaa 109  Q
    ||| |||||    
T  47986208 ctactttaa 47986200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 53352566 - 53352660
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||| | ||||| ||||  ||||||| ||||||||| ||||||||||||||    
T  53352566 agaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41823982 - 41823920
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagg 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  41823982 agaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 50813892 - 50813994
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||| ||  |||| || |||||||||||||| |||||||||| ||||||||| |||||||||  ||| |||||||||| |||    
T  50813892 agaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataact 50813991  T
Q  101 cta 103  Q
    |||    
T  50813992 cta 50813994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 3716384 - 3716324
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  3716384 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcca 3716324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17983743 - 17983823
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| ||||||||||||||||||||    
T  17983743 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 48579256 - 48579316
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  48579256 taatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcca 48579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 29547961 - 29548060
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||| ||| |||||| ||||  || | || |||||||||||||| |||||||||| || ||||||||||||||||||||| |||||||||| |||||    
T  29547961 aaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactct 29548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 28037744 - 28037682
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||    
T  28037744 taatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgccata 28037682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28480268 - 28480370
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||||| || |||| ||   |||||||| ||||||||| ||||||||||| || |||    
T  28480268 agaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataact 28480367  T
Q  101 cta 103  Q
    |||    
T  28480368 cta 28480370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28481143 - 28481245
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||||| || |||| ||   |||||||| ||||||||| ||||||||||| || |||    
T  28481143 agaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataact 28481242  T
Q  101 cta 103  Q
    |||    
T  28481243 cta 28481245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28482018 - 28482120
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||||| || |||| ||   |||||||| ||||||||| ||||||||||| || |||    
T  28482018 agaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataact 28482117  T
Q  101 cta 103  Q
    |||    
T  28482118 cta 28482120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 52589130 - 52589080
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52589130 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccata 52589080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48647726 - 48647827
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||||||| ||||||||||| |||||| |||||||| | ||||||| ||  |||||||||  |||||||||||| ||||| |||| |||    
T  48647726 agaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataact 48647825  T
Q  101 ct 102  Q
    ||    
T  48647826 ct 48647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8343163 - 8343263
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||| | ||| |||||||||||  || | || |||||||||||| | | ||||||||||| ||||||||||||||||||||| |||||||||| |||    
T  8343163 agaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataact 8343262  T
Q  101 c 101  Q
    |    
T  8343263 c 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 27538974 - 27538915
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  27538974 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 34280576 - 34280635
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  34280576 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 34280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 51436161 - 51436220
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  51436161 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 30342884 - 30342822
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||| |||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  30342884 taatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgccata 30342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 30539628 - 30539568
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || ||||||    
T  30539628 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcca 30539568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 14802771 - 14802712
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||    
T  14802771 taatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 14802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 36592382 - 36592437
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatt 157  Q
    ||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||    
T  36592382 taatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 47302088 - 47302029
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| | ||||||||||||||||||||||| | || |||||||||||||||    
T  47302088 taatttaaggatttgatgtaccaatacactcaaattgttaggtgcaccataaaatttgcc 47302029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 52809291 - 52809350
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  52809291 taatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgcc 52809350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 13548751 - 13548817
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  13548751 taatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgccatttttt 13548817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 47104612 - 47104543
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||| |||||||| ||||||||| || |||||||| || ||||| |||||||| ||||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactct 47104543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 43137712 - 43137776
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||||| || ||||| ||||    
T  43137712 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccttatt 43137776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 46004685 - 46004733
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  46004685 ggtgtaccaatacactcaaatttttggatgtaccatagaattcgccata 46004733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 36091118 - 36091059
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||| ||  |||||||||||||| ||||||||    
T  36091118 taatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgcc 36091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44536746 - 44536848
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||| || |||||| |  |||| || |||||||||||||| ||| |||||| ||||||||||||||||||   ||| |||||||||| |||    
T  44536746 agaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataact 44536844  T
Q  101 ctaa 104  Q
    ||||    
T  44536845 ctaa 44536848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 47302446 - 47302399
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||    
T  47302446 gattgggtgtaccaatacactcaaatttttgagtgtaccataaaattt 47302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 48066352 - 48066411
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  48066352 taatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcc 48066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 53389194 - 53389253
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||||||||||| ||||||||    
T  53389194 taatttaaagatttagtgtaccgatacactcaaattgtttgatgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 55722535 - 55722476
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||  ||||||||||||| |||||||||| |||||| |||| ||||||||    
T  55722535 taatttaaggatttagtgtaccaatacattcaaattgttagatgtatcatagaatttgcc 55722476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 46041760 - 46041714
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtac 148  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||    
T  46041760 taatttaaagatttggtgtatcaatacactcaaattgttggatgtac 46041714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 46216128 - 46216178
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  46216128 gattgggtgtaccaatacactcaaatttttgggtgtacaatagaatttgcc 46216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 52940515 - 52940478
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  52940515 tacactcaaattgttggatgtaccatagaatttgccat 52940478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 18425465 - 18425525
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| |||||||||    
T  18425465 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcca 18425525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 18769182 - 18769114
Alignment:
Q  28 tgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||| ||||||||||||||||| ||||||| | ||||||||| |  || ||||||||| ||||||||||    
T  18769182 tgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29589740 - 29589831
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 93  Q
    ||||||||| |||||| ||||||||  || | || | |||||||||||| |||||||||| |||||||||| || |||||| ||| |||||||    
T  29589740 agaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 1414446 - 1414505
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||||||  || | ||| ||||||||||||||    
T  1414446 taatttaatgatttggtgtaccaatacactcaaatctttaggtgtgccataaaatttgcc 1414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 29646683 - 29646624
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||  |||| |||||||||||||||||||| | || ||||||||||| ||||||||    
T  29646683 taatttattgatttggtgtaccaatacactcaaaatttttgatgtaccatagaatttgcc 29646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 37855180 - 37855121
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||| |||||||||||||||| | | || |||| ||||||||    
T  37855180 taatttaaggatttggtgtacctatacactcaaattgttaggtatatcatagaatttgcc 37855121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 38835911 - 38835848
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||||| ||| | |||||||||||||||||||| || | ||||||||| |||||| |||||    
T  38835911 taatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttgtcatat 38835848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 52324314 - 52324373
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| | || ||||||||  |||||||||| |||||| ||||||||||||||||||    
T  52324314 taatttaatgctttggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 52324373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 19842473 - 19842431
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    |||||||||||| |||||||||||||| |||||||| ||||||    
T  19842473 tacactcaaatttttggatgtaccatagaatttgccttatttt 19842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 27550434 - 27550475
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  27550434 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccac 27550475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 39380746 - 39380808
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||| |||| ||||||||  |||||| ||||| ||| |||||||||| |||||||||||    
T  39380746 taatttaatgatttggtgtaccggtacacttaaatttttgaatgtaccatagaatttgccata 39380808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 40438983 - 40439045
Alignment:
Q  103 aatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||| |||| ||||||||  |||||||||||| |||  ||||||||| ||||||||||||    
T  40438983 aatttaatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgccatat 40439045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 18924530 - 18924575
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    |||||||||||||| ||| | |||| ||||||||||||||||||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagg 18924575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 45024895 - 45024862
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||||| ||||||||||||||||||    
T  45024895 tacactcaaattgttagatgtaccataaaatttg 45024862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 423211 - 423147
Alignment:
Q  101 ctaatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccata 164  Q
    ||||||||| || |||||||||| |||||||||||| | |||||||||| ||| ||||| |||||    
T  423211 ctaatttaaagaatgggtgtaccgatacactcaaatatattggatgtacgatagaatttaccata 423147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 5474384 - 5474416
Alignment:
Q  129 actcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||| |||||||||||||||||||||||||    
T  5474384 actcaaaatgttggatgtaccataaaatttgcc 5474416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 9381090 - 9381046
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtac 148  Q
    ||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  9381090 atttaagaatttggtgtaccaatacaatcaaattcttggatgtac 9381046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 53936859 - 53936923
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatat 165  Q
    |||||||| || ||||||||||  ||||||||||| | |||| ||||||||| ||||||||||||    
T  53936859 taatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgccatat 53936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2740374 - 2740271
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740374 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 2740275  T
Q  101 ctaa 104  Q
    ||||    
T  2740274 ctaa 2740271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18520884 - 18520981
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18520884 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36732942 - 36733043
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  36732942 agaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattact 36733041  T
Q  101 ct 102  Q
    ||    
T  36733042 ct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40145507 - 40145407
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40145507 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattact 40145408  T
Q  101 c 101  Q
    |    
T  40145407 c 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13811752 - 13811651
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||| |||||    
T  13811752 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttact 13811653  T
Q  101 ct 102  Q
    ||    
T  13811652 ct 13811651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14831914 - 14831814
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 14831815  T
Q  101 c 101  Q
    |    
T  14831814 c 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28177875 - 28177775
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28177875 agaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 28177776  T
Q  101 c 101  Q
    |    
T  28177775 c 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33149638 - 33149738
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33149638 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattact 33149737  T
Q  101 c 101  Q
    |    
T  33149738 c 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42414304 - 42414402
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  42414304 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35785299 - 35785199
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  35785299 agaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattact 35785200  T
Q  101 c 101  Q
    |    
T  35785199 c 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6679798 - 6679695
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||    
T  6679798 agaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataact 6679699  T
Q  101 ctaa 104  Q
    ||||    
T  6679698 ctaa 6679695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 15409614 - 15409711
Alignment:
Q  5 agtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||| |||||    
T  15409614 agtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactct 15409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35943892 - 35943992
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||||| |||    
T  35943892 agaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataact 35943991  T
Q  101 c 101  Q
    |    
T  35943992 c 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31009088 - 31008987
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||  ||||||| ||||||||||||| |||||||||| |||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataact 31008989  T
Q  101 ct 102  Q
    ||    
T  31008988 ct 31008987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26720616 - 26720516
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||| ||| | ||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||    
T  26720616 agaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26720517  T
Q  101 c 101  Q
    |    
T  26720516 c 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26990365 - 26990265
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||| ||| | ||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||    
T  26990365 agaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26990266  T
Q  101 c 101  Q
    |    
T  26990265 c 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2252168 - 2252270
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||    
T  2252168 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataact 2252267  T
Q  101 cta 103  Q
    |||    
T  2252268 cta 2252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 41470425 - 41470521
Alignment:
Q  10 gcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctaatt 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | | ||||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactctaatt 41470521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3921265 - 3921366
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  3921265 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 3921364  T
Q  101 ct 102  Q
    ||    
T  3921365 ct 3921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36875612 - 36875702
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||         ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36875612 agaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6260001 - 6260109
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| || | |||||| ||||| | |||| |||||||||  ||||||| ||||||||||||| |||||| || ||| ||||||||||||||    
T  6260001 agaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattact 6260100  T
Q  101 ctaatttaa 109  Q
    | |||||||    
T  6260101 caaatttaa 6260109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 13410601 - 13410545
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  13410601 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccataaaattt 13410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20073516 - 20073616
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||| |||||||||||   |||||  |||||||| | || |||||||||||||||||| || |||| ||||||||| ||||||||||    
T  20073516 agaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattact 20073615  T
Q  101 c 101  Q
    |    
T  20073616 c 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33825324 - 33825424
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||   ||| ||| |||  ||||||||||||||| | |||||||||| | ||||||||||||||||| ||||||||| |||||||||    
T  33825324 agaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattact 33825423  T
Q  101 c 101  Q
    |    
T  33825424 c 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 6114121 - 6114180
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  6114121 taatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcc 6114180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 16327999 - 16327902
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||| | ||| ||| |||  ||||||||||||||| | |||||||||| || ||||||||||||||||||| | ||| ||||||||||    
T  16327999 aaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  38 tcagatttttgtatgggtgtcaaaggg-tgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 21605707 - 21605644
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  21605707 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgtcatat 21605644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 2318782 - 2318831
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 160  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2318782 gattgggtgtaccaatacactcaaatttttggatataccataaaatttgc 2318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 6560885 - 6560828
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||    
T  6560885 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9603913 - 9603812
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||  ||||||||  |||| | ||||||||||||||| | ||||| || | |||||||  ||||||||||||| ||||||||||||||    
T  9603913 agaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattact 9603814  T
Q  101 ct 102  Q
    ||    
T  9603813 ct 9603812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39688897 - 39688998
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||| |||||||| ||  |||| || | |||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||||||| |||    
T  39688897 agaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataact 39688996  T
Q  101 ct 102  Q
    ||    
T  39688997 ct 39688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 2029412 - 2029352
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||  |||||||||    
T  2029412 taatttaaggatttggtgtaccaatacacttaaattgttagatgtaccatggaatttgcca 2029352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 43237700 - 43237760
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||| ||| |||||||||||||||||||||| |||| ||||||||| |||||||||    
T  43237700 taatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcca 43237760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 1662041 - 1662100
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| || |||||    
T  1662041 taatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 1662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 6532638 - 6532579
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||||| ||||||||    
T  6532638 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgcc 6532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 27116512 - 27116465
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27116512 gattgggtgtaccaatacactcaaatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 34302705 - 34302646
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||||||    
T  34302705 taatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 42917176 - 42917117
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||||||||| || |||||| ||||||||    
T  42917176 taatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 31132442 - 31132396
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 49  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  31132442 aaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgt 31132396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38296303 - 38296202
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||  || |||||||  ||||||||| ||||||||| ||||| | ||  ||||||||| ||||||||   ||||||||||||| |||    
T  38296303 agaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataact 38296204  T
Q  101 ct 102  Q
    ||    
T  38296203 ct 38296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 2141301 - 2141237
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||| ||| |||||||||||||||||||||| |||| | |||||||||| ||||| ||||    
T  2141301 taatttaagaatttggtgtaccaatacactcaaattattgggtctaccataaaacttgccttatt 2141237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 29743951 - 29743895
Alignment:
Q  105 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  29743951 tttaaggatttggtgtaccaatacacttaaatttttgaatgtaccatataatttgcc 29743895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 4618059 - 4618118
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||||||||||||    
T  4618059 taatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcc 4618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 36409951 - 36409904
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  36409951 ggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgccat 36409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 2614624 - 2614555
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||  ||  ||||||||||||||||    
T  2614624 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactcta 2614555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 18228806 - 18228856
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||||||| ||| ||||||||||||||||||||| | |||||||||    
T  18228806 taatttaaggatttggtataccaatacactcaaattgttaggtgtaccata 18228856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 36752557 - 36752619
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||||||||  || ||||| |||||||||||||||||||||||| |  |||||||||||    
T  36752557 taatttaaggattttgtataccactacactcaaattgttggatgtaccgtggaatttgccata 36752619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 12362705 - 12362765
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  ||||||||||||||||||||| ||||| |||  ||||||||| |||||||||    
T  12362705 taatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcca 12362765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21370104 - 21370048
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgt 57  Q
    ||||| |||| |||||||||||||||||||| || |||||||||||||  |||||||    
T  21370104 agaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 15725844 - 15725903
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||||   ||||||||||||||| || ||||||||||||||||    
T  15725844 taatttaaagatttggtgtaccggaacactcaaattgttgaatttaccataaaatttgcc 15725903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 16433002 - 16433057
Alignment:
Q  106 ttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| |||||||   |||||||||||  |||||||||||||||||||||||    
T  16433002 ttaaggatttggtgtactggtacactcaaataattggatgtaccataaaatttgcc 16433057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 34065003 - 34064960
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||  |||||||||| |||||||||||||||||||||||    
T  34065003 ggtgtaccggtacactcaaaatgttggatgtaccataaaatttg 34064960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 35162410 - 35162351
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||||| |||||| ||||| |||| ||||||||||| ||||||    
T  35162410 taatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgcc 35162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 41334659 - 41334597
Alignment:
Q  12 ttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  41334659 ttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgt-aaagggtgtattgccac 41334597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 3056444 - 3056394
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||  ||| |||||||||||||||| |||||||||| |||||||||    
T  3056444 taatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccata 3056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 33145210 - 33145264
Alignment:
Q  105 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||| |||| |||||||||||||||||| ||| |||| ||||||||| ||||||    
T  33145210 tttaatgatttggtgtaccaatacactcatatttttgggtgtaccatagaatttg 33145264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 9534929 - 9534868
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||| ||| |||||||||||||||||||||| |||  | ||||||| || |||||||    
T  9534929 taatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgccat 9534868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 10227929 - 10227974
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    |||||||||||||||| |||||||| || ||||||||||| |||||    
T  10227929 tgtcagatttttgtatcggtgtcaagggatgtattgccacataagg 10227974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 13795617 - 13795678
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||||||  |||| ||||||||||| |||||||||| || ||||||||||| ||||| ||||    
T  13795617 taatttattgattaggtgtaccaatgcactcaaattttttgatgtaccatagaatttaccat 13795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39557517 - 39557594
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccaccta 78  Q
    |||||||||| ||||  |||||||| ||||  ||||||||||||||||| ||| ||| ||  |||||||| |||||||    
T  39557517 agaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 480021 - 480081
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || || ||||||| |||||||||||| |  ||||||||||||||||||||||    
T  480021 taatttaaagagtgagtgtaccgatacactcaaatatactggatgtaccataaaatttgcc 480081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 6335435 - 6335387
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||  |||||||||| |||||| ||||||||| |||||||||||    
T  6335435 ggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgccata 6335387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 21051651 - 21051711
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  |||| |||||||||||||| ||||||  || ||||||||||| |||||||||    
T  21051651 taatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcca 21051711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 23408311 - 23408255
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| |||||    
T  23408311 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 28332171 - 28332119
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcca 162  Q
    |||| |||||||||||||||||||||| || || ||||||||| |||||||||    
T  28332171 gatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcca 28332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2582015 - 2581914
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  101 ct 102  Q
    ||    
T  2581915 ct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51898683 - 51898786
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 51898782  T
Q  101 ctaa 104  Q
    ||||    
T  51898783 ctaa 51898786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9474876 - 9474976
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9474876 agaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 9474975  T
Q  101 c 101  Q
    |    
T  9474976 c 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27564735 - 27564835
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27564735 agaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattact 27564834  T
Q  101 c 101  Q
    |    
T  27564835 c 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3000419 - 3000319
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3000419 agaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 3000320  T
Q  101 c 101  Q
    |    
T  3000319 c 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44548376 - 44548482
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||| |    
T  44548376 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcattaat 44548475  T
Q  101 ctaattt 107  Q
    | |||||    
T  44548476 caaattt 44548482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 48716284 - 48716382
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  48716284 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32813347 - 32813246
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  32813347 agaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 32813248  T
Q  101 ct 102  Q
    ||    
T  32813247 ct 32813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38595254 - 38595153
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  38595254 agaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattact 38595155  T
Q  101 ct 102  Q
    ||    
T  38595154 ct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 50630558 - 50630453
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||| | ||||||||||||||||    
T  50630558 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattact 50630459  T
Q  101 ctaatt 106  Q
    ||||||    
T  50630458 ctaatt 50630453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47452320 - 47452420
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  47452320 agaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattact 47452419  T
Q  101 c 101  Q
    |    
T  47452420 c 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 38632323 - 38632422
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  38632323 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactct 38632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8346388 - 8346489
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | || |||||||||||||||    
T  8346388 agaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattact 8346487  T
Q  101 ct 102  Q
    ||    
T  8346488 ct 8346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43232 - 43132
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||  ||||||||||||||||||    
T  43232 agaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattact 43133  T
Q  101 c 101  Q
    |    
T  43132 c 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 37649297 - 37649198
Alignment:
Q  2 gaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||||||||||||||  | |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  37649297 gaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41758905 - 41758803
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||  ||| | ||||||||||||||||||    
T  41758905 agaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattact 41758806  T
Q  101 cta 103  Q
    |||    
T  41758805 cta 41758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11152378 - 11152476
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||| ||||||||    
T  11152378 agaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45044560 - 45044661
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||| |||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||| |||    
T  45044560 agaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataact 45044659  T
Q  101 ct 102  Q
    ||    
T  45044660 ct 45044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 49811527 - 49811628
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||| ||| |  || ||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||| |||||| |||    
T  49811527 agaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataact 49811626  T
Q  101 ct 102  Q
    ||    
T  49811627 ct 49811628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 50591000 - 50591105
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  50591000 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 50591099  T
Q  101 ctaatt 106  Q
    | ||||    
T  50591100 caaatt 50591105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 23597093 - 23597192
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||| ||||||  |||| ||||| | ||||||||||||||| | ||||| |||||| |||||||||||||||| ||||||||||||||||||||||    
T  23597093 aaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactct 23597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13414861 - 13414791
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattg 71  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  13414861 agaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5959000 - 5959101
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  |||| || |||||||||||||| ||||||||||  ||||||||||||| ||||| ||| |||||||||| |||    
T  5959000 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataact 5959099  T
Q  101 ct 102  Q
    ||    
T  5959100 ct 5959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26440834 - 26440741
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 94  Q
    ||||||||||||| |||||| |||| ||| | ||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||| ||||    
T  26440834 agaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 26274530 - 26274426
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||| ||||||| || |||||||||||| ||||||||||||| | ||| ||||||| | ||||||||||| ||||| |||||||||||||||| |||    
T  26274530 aaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattct 26274431  T
Q  103 aattt 107  Q
     ||||    
T  26274430 tattt 26274426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41608493 - 41608593
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||||| |||||||||  || | || |||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||||| |||    
T  41608493 agaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataact 41608592  T
Q  101 c 101  Q
    |    
T  41608593 c 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 37498803 - 37498742
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37498803 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgccat 37498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3302533 - 3302633
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||  ||||||||  ||| |||||||||||||||||| |||||||| | |  | ||||| ||||||||||||| ||||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattact 3302632  T
Q  101 c 101  Q
    |    
T  3302633 c 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 922189 - 922248
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  922189 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 31931045 - 31931104
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||    
T  31931045 taatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgcc 31931104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 8461873 - 8461935
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  8461873 taatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgccata 8461935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37926438 - 37926540
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||||| |||| |||| ||| | ||||||||||||||| | ||||||| ||| | ||||||||||||||| ||| |||||||||||| |||    
T  37926438 agaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataact 37926537  T
Q  101 cta 103  Q
    |||    
T  37926538 cta 37926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6260970 - 6260870
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||| ||||||||||||||||| || ||| |||||||| | |||||||  | ||||||||| |||||||||||| ||||| |||||| |||    
T  6260970 agaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataact 6260871  T
Q  101 c 101  Q
    |    
T  6260870 c 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 39190904 - 39190964
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  39190904 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcca 39190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 27295117 - 27295058
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27295117 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 35305210 - 35305151
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35305210 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 35305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 45423668 - 45423609
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||||    
T  45423668 taatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcc 45423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 50905640 - 50905581
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  50905640 taatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 50905581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 18641947 - 18641881
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    |||||||||||||  |||||||||||||||||||||||||  ||||||||| || ||||||||||||    
T  18641947 taatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgccatatttt 18641881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 44454077 - 44453984
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||| ||||| ||||  | ||||||||||| ||| | ||||||||||||||    
T  44454077 aaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47748542 - 47748443
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||| | |||||||||| ||||  || | || |||||||||||| |||||||||||| |||||||||||||||||||| | | |||||||||| |||    
T  47748542 agaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataact 47748444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 51781451 - 51781507
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  51781451 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 16482635 - 16482576
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| ||||||||    
T  16482635 taatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 41073329 - 41073270
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  41073329 taatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 41073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 48616794 - 48616857
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||  ||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||    
T  48616794 taatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccatat 48616857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 51369386 - 51369327
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  51369386 atttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgccat 51369327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 5956874 - 5956936
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||  ||| |||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  5956874 taatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgccata 5956936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 51519841 - 51519791
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  51519841 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccata 51519791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 633004 - 633057
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  633004 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccata 633057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48489400 - 48489328
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgcca 74  Q
    ||||| |||||||||||||| |||||||||| || |||||||||||||| ||| ||||  ||||||||||||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 26011298 - 26011346
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  26011298 gattgggtgtatcaatacactcaaatttttgggtgtaccataaaatttg 26011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 33099017 - 33099061
Alignment:
Q  117 gtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  33099017 gtgtaccaatacactcaaattgttgaatgtaccatataatttgcc 33099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 28493869 - 28493810
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||| ||||||||| ||||| |||| ||||||||| ||||||||    
T  28493869 taatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgcc 28493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 34256512 - 34256453
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||| |||||||| |||||||||||||||||| ||||||||| ||||||||    
T  34256512 taatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcc 34256453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 46771079 - 46771138
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||| ||||||||||||||||||||| | ||||||||| || |||||    
T  46771079 taatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgcc 46771138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 6520348 - 6520382
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccata 152  Q
    |||||||||||||||||||||||||||||||||||    
T  6520348 tgtaccaatacactcaaattgttggatgtaccata 6520382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 44334175 - 44334245
Alignment:
Q  6 gtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacc 76  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||| ||| |||||| | ||||||| |||||    
T  44334175 gtgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 51984993 - 51984936
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||| | |||||||||||||||||||| |||  ||||||||| ||||||    
T  51984993 taatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 23056824 - 23056768
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||  ||| |||||||||||||||| ||||| |||||||||||||| |||||    
T  23056824 taatttaaaaattcggtgtaccaatacacttaaattattggatgtaccatataattt 23056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 39971616 - 39971676
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||| |||||||| || ||||||    
T  39971616 taatttaagaatttggtataccaatacactcaaattattggacgtaccatagaacttgcca 39971676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 44978928 - 44978868
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| |||||||||    
T  44978928 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcca 44978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 45673384 - 45673336
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  45673384 atttaaggatttgatgtatcaatacactcaaattgttgggtgtaccata 45673336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 750301 - 750239
Alignment:
Q  12 ttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    ||||| |||||||| || || |||||||||| |||||| ||||||| |||||||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 8096968 - 8097003
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||| |||||||||||||||||||||||    
T  8096968 tacactcaaatttttggatgtaccataaaatttgcc 8097003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 9166932 - 9166873
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||  |||| |||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  9166932 taatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgcc 9166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 38262481 - 38262540
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| |||||||||||||||||||||||||   ||||||||| || |||||    
T  38262481 taatttaagaatttggtgtaccaatacactcaaattgttaagtgtaccatagaacttgcc 38262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 46362367 - 46362430
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccata 164  Q
    |||||||| || ||||||||| | ||||||||||| | ||||||||||||||||||||| ||||    
T  46362367 taatttaaagaatgggtgtactagtacactcaaatatattggatgtaccataaaatttgtcata 46362430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 52303072 - 52303013
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| | |||||||||||||||||||| |||| |||| |||| ||||||||    
T  52303072 taatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcc 52303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 2247126 - 2247064
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||| |||| |||||||||||||||||||||  || | ||||||||| |||||| ||||    
T  2247126 taatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaatttgtcata 2247064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 44246345 - 44246403
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 160  Q
    ||||||||||||| |||||||||||||| || || | |||||| ||||||| |||||||    
T  44246345 taatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 4401453 - 4401525
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctaatt 106  Q
    |||||||||| |||||| ||||||| ||||||||||||||||| || ||  ||  ||||||||| |||||||||    
T  4401453 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccacatagggtggtacatgtatcatcactctaatt 4401525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 7122016 - 7121951
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 167  Q
    |||||||| |||| | |||||||||||||||||||  || | | ||||||| ||||||||||||||    
T  7122016 taatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgccatattt 7121951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 11778983 - 11779040
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    |||||||| |||| | |||||||||||||||||||  |||| ||||||||| ||||||    
T  11778983 taatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 33906369 - 33906312
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    ||||| ||||||||||| ||||||||| || ||||||||||| ||||| || ||||||    
T  33906369 gattgagtgtaccaatatactcaaatttttagatgtaccatataatttaccttatttt 33906312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 34038526 - 34038571
Alignment:
Q  117 gtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||    
T  34038526 gtgtaccaatacactcaaatatattggatgtaccatagaatttgcc 34038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 42275701 - 42275742
Alignment:
Q  120 taccaatacactcaaat-tgttggatgtaccataaaatttgc 160  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  42275701 taccaatacactcaaatatattggatgtaccataaaatttgc 42275742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 51184101 - 51184044
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    |||||||| |||| | |||||||||||||||||||  |||| ||||||||| ||||||    
T  51184101 taatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 51787815 - 51787876
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 162  Q
    |||||||| || ||||||||||  ||||||||||| | |||||||||||||| |||||||||    
T  51787815 taatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcca 51787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 24230929 - 24230977
Alignment:
Q  114 tgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||||| |||||||||||| | |||||||||||||| ||||||||    
T  24230929 tgggtgtaccgatacactcaaatatattggatgtaccatagaatttgcc 24230977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 25493558 - 25493498
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaa-ttgttggatgtaccataaaatttgcc 161  Q
    |||||| | |||| ||||||||||||||| |||| || |||||||||||||| ||||||||    
T  25493558 taattttacgatttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcc 25493498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 26102820 - 26102876
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||| |||||| ||||||||| ||||| |||  ||||||||| |||||    
T  26102820 taatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 35874285 - 35874345
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || || |||||||||||||||||||| | |||| ||||||||| ||||||||    
T  35874285 taatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcc 35874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 43146454 - 43146422
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||||||||||||||||| |||||    
T  43146454 tacactcaaattgttggatgtaccatagaattt 43146422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 44382364 - 44382424
Alignment:
Q  103 aatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 162  Q
    ||||||||| |  ||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  44382364 aatttaagggtctggtgtaccggtacactcaaatatgttgggtgtaccataaaatttgcca 44382424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 50534245 - 50534289
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 160  Q
    ||||||||  |||||||||| |||||||||||||||| |||||||    
T  50534245 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgc 50534289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 51873645 - 51873681
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||||| |||||||||||||||| |||||||||    
T  51873645 tacactcaaaatgttggatgtaccatagaatttgcca 51873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 53982111 - 53982011
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  53982111 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 53982012  T
Q  101 c 101  Q
    |    
T  53982011 c 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33644300 - 33644200
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  33644300 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattact 33644201  T
Q  101 c 101  Q
    |    
T  33644200 c 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 49607514 - 49607413
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49607514 agaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 49607415  T
Q  101 ct 102  Q
    ||    
T  49607414 ct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52629400 - 52629305
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  52629400 agaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27714891 - 27714992
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  27714891 agaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattact 27714990  T
Q  101 ct 102  Q
    ||    
T  27714991 ct 27714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54868895 - 54868996
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  54868895 agaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattact 54868994  T
Q  101 ct 102  Q
    ||    
T  54868995 ct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8076493 - 8076393
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  8076493 agaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattact 8076394  T
Q  101 c 101  Q
    |    
T  8076393 c 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31456789 - 31456690
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  31456789 agaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17470505 - 17470403
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  17470505 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattact 17470406  T
Q  101 cta 103  Q
    |||    
T  17470405 cta 17470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26141532 - 26141632
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  26141532 agaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26141631  T
Q  101 c 101  Q
    |    
T  26141632 c 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11095355 - 11095454
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| || ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11095355 agaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 11095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48587091 - 48587187
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 97  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | |||||||||||||    
T  48587091 agaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33118851 - 33118952
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| || || ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||    
T  33118851 agaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataact 33118950  T
Q  101 ct 102  Q
    ||    
T  33118951 ct 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14623839 - 14623939
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| | ||||||| |||  || |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14623839 agaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattact 14623938  T
Q  101 c 101  Q
    |    
T  14623939 c 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24699954 - 24700057
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||| | ||||||||||| | ||||| ||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  24699954 agaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattact 24700053  T
Q  101 ctaa 104  Q
    ||||    
T  24700054 ctaa 24700057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11347922 - 11348023
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| ||| ||||||| ||| | ||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |||    
T  11347922 agaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataact 11348021  T
Q  101 ct 102  Q
    ||    
T  11348022 ct 11348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41189764 - 41189865
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||| | |||||||| |||||| | ||||||||||| | ||||||||||||||||||||| |||||||||| |||    
T  41189764 agaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataact 41189863  T
Q  101 ct 102  Q
    ||    
T  41189864 ct 41189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20764915 - 20765015
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||| |||| |||    
T  20764915 agaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataact 20765014  T
Q  101 c 101  Q
    |    
T  20765015 c 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51419360 - 51419460
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||| | ||| | ||||||||||||||||| ||||||| ||||| ||||||| || ||||||||||||||||||||| |||    
T  51419360 agaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataact 51419459  T
Q  101 c 101  Q
    |    
T  51419460 c 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13898055 - 13898154
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| | ||||||| |||  ||||||||||||||| | |||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  13898055 agaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26754795 - 26754700
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||||||| ||| |||| |||||||||||||||||||||| |||||||| |||||    
T  26754795 agaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 35536723 - 35536624
Alignment:
Q  4 aagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    |||||||||||||   ||||||| |||| |||||||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  35536723 aagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactcta 35536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9563099 - 9562997
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||||| || |||||||||||||||||||||||||| ||||| ||||||||| ||||||| || |||| | ||| ||||||||||||||    
T  9563099 agaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattact 9563000  T
Q  101 cta 103  Q
    |||    
T  9562999 cta 9562997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 36707439 - 36707525
Alignment:
Q  16 gcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactct 36707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 8956859 - 8956760
Alignment:
Q  4 aagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    |||||||||||||   ||||||| |||  |||||||| |||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  8956859 aagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactcta 8956760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30801733 - 30801829
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 97  Q
    ||||| |||||||||| ||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||||  ||||||||| |||||||||||||||    
T  30801733 agaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47531965 - 47531865
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||| ||  || | |||||||||||| |||| ||| ||| ||| |||||||||||| ||||||||||||||||||||| |||    
T  47531965 agaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataact 47531866  T
Q  101 c 101  Q
    |    
T  47531865 c 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 42067638 - 42067579
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42067638 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 42067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48375706 - 48375808
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||||||||||||| ||||| ||  ||||||||||||||||| | |  | |||||||||| ||||||||| |||||||| ||||| |||    
T  48375706 agaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataact 48375805  T
Q  101 cta 103  Q
    |||    
T  48375806 cta 48375808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11907471 - 11907370
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||||||||||||||||||  |||| || |||||||||||||| || ||||  | | |||||||| ||||||||| |||||||||||||| |||    
T  11907471 agaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataact 11907372  T
Q  101 ct 102  Q
    ||    
T  11907371 ct 11907370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 38785429 - 38785489
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||    
T  38785429 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcca 38785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41080807 - 41080709
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||||||||| ||| ||||| |||| || | |||||||||||  ||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  41080807 agaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcattact 41080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 876569 - 876628
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||    
T  876569 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 876628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 11140306 - 11140247
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  11140306 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 11140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 29786944 - 29787003
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29786944 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 42364274 - 42364333
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  42364274 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 21746212 - 21746289
Alignment:
Q  32 tacgtgtcagatttttgtatggg--tgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctaattt 107  Q
    |||||||||||||||||| ||||  |||| | |  ||||||||||||||||||||| |||||||||||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactctaattt 21746289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36331329 - 36331407
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaa 79  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| ||||| ||||||||||||    
T  36331329 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 44670605 - 44670667
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||| || |||||||||||    
T  44670605 taatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgccata 44670667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 35965806 - 35965875
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||| | ||||||||||||| ||||||  ||| ||||||||| ||||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactct 35965875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 19547539 - 19547487
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  19547539 gattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgccat 19547487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 29347607 - 29347663
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  29347607 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29347663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45058553 - 45058652
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||| | |||||||||||||||  ||   || |||||||||||| | |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  45058553 agaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataact 45058651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 27079726 - 27079785
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| || |||||    
T  27079726 taatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27079785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 27082693 - 27082752
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| || |||||    
T  27082693 taatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27082752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 31308936 - 31308877
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  31308936 taatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcc 31308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 35171540 - 35171599
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||| || |||||    
T  35171540 taatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 35171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 39630238 - 39630297
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  39630238 taatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgcc 39630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 40650126 - 40650067
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||| || |||||    
T  40650126 taatttaaggatttggtgtaccaatacactcaaattgttagttgtaccatagaacttgcc 40650067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 379224 - 379274
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 152  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  379224 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccata 379274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 25592353 - 25592413
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  |||| |||||| ||||||||||||||| |||||||||||||| |||||||||    
T  25592353 taatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcca 25592413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 43715104 - 43715156
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  43715104 gatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgccat 43715156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 42848553 - 42848615
Alignment:
Q  102 taatttaaggattgggtgt--accaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||  |||||||||||||||||||||| ||||||||| || ||||||    
T  42848553 taatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcca 42848615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 44365680 - 44365621
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| |||||||||||||||| |||||||||| |||| |||| ||||||||    
T  44365680 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgcc 44365621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 45636148 - 45636089
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |||||| || ||||||||    
T  45636148 taatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 47470487 - 47470428
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||| |||||||||| ||| ||||||||| ||||||| |||||    
T  47470487 taatttaaggatttggtgtactaatacactcacattcttggatgtagcataaaacttgcc 47470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 7671852 - 7671806
Alignment:
Q  112 attgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||    
T  7671852 attgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25407147 - 25407245
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||| ||||| ||| ||||  |||  ||||||||||||||| || || ||||||| |||| |||||||||||| || ||| ||||||||||||    
T  25407147 agaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 27647528 - 27647478
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||    
T  27647528 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 27647478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 53516937 - 53516991
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||||||||||||||||||||||| ||   ||||||||| ||||||||||||    
T  53516937 gattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgccatat 53516991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 35093685 - 35093592
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 94  Q
    |||||||||||||||  || || ||| |||| || |||||||||||||  ||| ||||||| | ||||||| ||||||| | ||||||||||||    
T  35093685 agaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 36331416 - 36331481
Alignment:
Q  39 cagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctaa 104  Q
    ||||||||||| ||| |||||| ||||| ||||||| |||||| ||| |||||||||| |||||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactctaa 36331481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 39670108 - 39670019
Alignment:
Q  4 aagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 93  Q
    |||||||| ||| || ||||||| |||  |||||||| |||||| ||| | |||||| || | ||||||||| |||||||||||||||||    
T  39670108 aagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1758456 - 1758559
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaa--agggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    ||||| |||| ||||| || |||||||| || |  |||||||||||||| ||||||||||   ||||||||||| ||||| || || ||||||||||| |    
T  1758456 agaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataa 1758555  T
Q  99 ctct 102  Q
    ||||    
T  1758556 ctct 1758559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 8965974 - 8965914
Alignment:
Q  103 aatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 162  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||||| || |||||||||    
T  8965974 aatttaaggatctggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 14998506 - 14998558
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||| ||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  14998506 gatttggtgtaccggtacactcaaatttttgggtgtaccataaaatttgccat 14998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 24397419 - 24397372
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||||    
T  24397419 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgccat 24397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42823211 - 42823116
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    ||||||| | ||| |||||||||||  |||| || ||||| |||||| | |||||||||| ||||||||| |||| ||| | ||| ||||||||||    
T  42823211 agaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 47948742 - 47948801
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| |||| |||| || |||||    
T  47948742 taatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgcc 47948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 21289169 - 21289219
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||| |||  ||||||||| ||||||||    
T  21289169 gattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgcc 21289219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 28146686 - 28146728
Alignment:
Q  126 tacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  28146686 tacactcaaaatgttggatgtaccatagaatttgccaaatttt 28146728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 40021139 - 40021077
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccat 163  Q
    |||||||| || ||| ||||||| ||||||||||| | |||||||||||||| ||||||||||    
T  40021139 taatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgccat 40021077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 39540714 - 39540673
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  39540714 tgtaccagtacactcaaaatgttggatgtaccatagaatttg 39540673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 16136969 - 16137029
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || ||| |||||| |||||||||||| | |||||||||||||| ||||||||    
T  16136969 taatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 25395368 - 25395428
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||||||||| ||||| | || || ||||| ||||| ||||||||| ||||||||||    
T  25395368 tgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcat 25395428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 26409966 - 26410026
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattg-ttggatgtaccataaaatttgcc 161  Q
    |||||||| || | |||||||| |||||| ||||||  |||||||||||||||||||||||    
T  26409966 taatttaatgaattggtgtaccgatacacccaaatttattggatgtaccataaaatttgcc 26410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 26885318 - 26885378
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || | |||||||| |||||||||||| | |||| ||||||||||||||||||    
T  26885318 taatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 26885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 42622196 - 42622256
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || ||||||||||  ||||||||||| | |||| ||||||||||||||||||    
T  42622196 taatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 42622256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  31 ctacgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37038579 - 37038477
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 37038480  T
Q  101 cta 103  Q
    |||    
T  37038479 cta 37038477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12831147 - 12831047
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  12831147 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattact 12831048  T
Q  101 c 101  Q
    |    
T  12831047 c 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15197433 - 15197333
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15197433 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 15197334  T
Q  101 c 101  Q
    |    
T  15197333 c 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14548022 - 14547921
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  14548022 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttact 14547923  T
Q  101 ct 102  Q
    ||    
T  14547922 ct 14547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 504121 - 504221
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  504121 agaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattact 504220  T
Q  101 c 101  Q
    |    
T  504221 c 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5957930 - 5957831
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5957930 agaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23122597 - 23122697
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  23122597 agaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattact 23122696  T
Q  101 c 101  Q
    |    
T  23122697 c 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34012296 - 34012396
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34012296 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattact 34012395  T
Q  101 c 101  Q
    |    
T  34012396 c 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40423943 - 40424043
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  40423943 agaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattact 40424042  T
Q  101 c 101  Q
    |    
T  40424043 c 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1179940 - 1180040
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1179940 agaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattact 1180039  T
Q  101 c 101  Q
    |    
T  1180040 c 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15048182 - 15048281
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  15048182 agaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 15048280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 44507087 - 44507189
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||| ||||||||||||||||||    
T  44507087 agaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattact 44507186  T
Q  101 cta 103  Q
    |||    
T  44507187 cta 44507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10284631 - 10284732
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||| ||||| |||||||||||||| |||    
T  10284631 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataact 10284730  T
Q  101 ct 102  Q
    ||    
T  10284731 ct 10284732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10621087 - 10621182
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  10621087 agaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8841432 - 8841512
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  8841432 agaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43414581 - 43414681
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  43414581 agaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataact 43414680  T
Q  101 c 101  Q
    |    
T  43414681 c 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4854863 - 4854964
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||| ||||||| ||| | || | |||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4854863 agaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattact 4854962  T
Q  101 ct 102  Q
    ||    
T  4854963 ct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16383477 - 16383376
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  16383477 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 16383378  T
Q  101 ct 102  Q
    ||    
T  16383377 ct 16383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34307316 - 34307215
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||| ||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  34307316 agaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 34307217  T
Q  101 ct 102  Q
    ||    
T  34307216 ct 34307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42221615 - 42221514
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||  ||||||||  ||| |||||||||||||||||| |||||||| | |  ||||||| ||||||||||||| ||||||||||||||    
T  42221615 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattact 42221516  T
Q  101 ct 102  Q
    ||    
T  42221515 ct 42221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    |||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16056401 - 16056502
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| || ||||||| ||| ||||||||| |||||||||| |||    
T  16056401 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataact 16056500  T
Q  101 ct 102  Q
    ||    
T  16056501 ct 16056502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24307793 - 24307894
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || | |||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| |||    
T  24307793 agaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataact 24307892  T
Q  101 ct 102  Q
    ||    
T  24307893 ct 24307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9122285 - 9122196
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||| |          |||||||||||||||||||| ||||||||||||||||||    
T  9122285 agaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgt----------gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 15726237 - 15726296
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  15726237 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 15726296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17443925 - 17443822
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||  ||||| ||||||||| ||||||| |||||||||||||| || |||| ||   |||||||| ||||||||| |||||||||||||| |||    
T  17443925 agaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataact 17443826  T
Q  101 ctaa 104  Q
    ||||    
T  17443825 ctaa 17443822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 29773504 - 29773445
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29773504 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29773445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30479474 - 30479574
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||| ||||||  |  | || |||||||||||| | ||| ||||||||||||||||||||||||||| ||| |||||||||| |||    
T  30479474 agaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataact 30479573  T
Q  101 c 101  Q
    |    
T  30479574 c 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  18 ggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||||||||||||| ||| |||||||||| ||| |||||| | |||||||| ||||||||| |||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 14498650 - 14498709
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  14498650 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 14498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 36002415 - 36002356
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||    
T  36002415 taatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgcc 36002356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15258929 - 15259030
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||||| | ||| |||| | || |||||||||| |||||  | |||||||||||| |||    
T  15258929 agaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataact 15259028  T
Q  101 ct 102  Q
    ||    
T  15259029 ct 15259030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 24307692 - 24307628
Alignment:
Q  38 tcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| |||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactct 24307628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 28090251 - 28090191
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||| ||||||||| |||| ||||||||| |||||||||    
T  28090251 taatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcca 28090191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 37511147 - 37511083
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  37511147 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgccttatt 37511083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 43049596 - 43049536
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||| |||| |||||||||||||| ||||||| |||||||||||||| |||||||||    
T  43049596 taatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcca 43049536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 946035 - 945976
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||||| || ||||||||    
T  946035 taatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgcc 945976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 19718698 - 19718757
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  19718698 taatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgcc 19718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 23286624 - 23286565
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||| ||||||||| | ||||||||| ||||||||    
T  23286624 taatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcc 23286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 29229524 - 29229583
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  29229524 taatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 29229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32032824 - 32032718
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||||||| || ||||  || | || |||||||||||||| ||| |||||| || ||||||||||||||||| ||| |||||||||| |||    
T  32032824 agaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataact 32032726  T
Q  101 ctaattta 108  Q
    ||| ||||    
T  32032725 ctatttta 32032718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 38502243 - 38502184
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  38502243 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 38502184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 44934958 - 44934895
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||||||||| | |||||||||||| |||||||||||| ||||||||| |||||| |||||    
T  44934958 taatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaatttgtcatat 44934895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 17642133 - 17642068
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 167  Q
    |||||||| |||| |||||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  17642133 taatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgccttattt 17642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 30183906 - 30183975
Alignment:
Q  32 tacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||| ||||||||||||||| ||||| | |  ||||||||||| ||||||||| |||||||||||||||    
T  30183906 tacgtatcagatttttgtatgagtgtccaggaatgtattgccacgtaaggatgtatatgtatcattactc 30183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 37465743 - 37465684
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||  |||| |||||||||||||||| ||||| |||||||||||||| ||||||||    
T  37465743 taatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcc 37465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 39347493 - 39347536
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  39347493 tgtaccaatacactcaaattttttgatgtaccataaaatttgcc 39347536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 42444565 - 42444624
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||||||  || ||||||||||| ||||||||    
T  42444565 taatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgcc 42444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 11582891 - 11582960
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||  ||  ||||||||||||||||    
T  11582891 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactcta 11582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 29459671 - 29459633
Alignment:
Q  123 caatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29459671 caatacactcaaattgttgggtgtaccataaaatttgcc 29459633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 34332171 - 34332109
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    ||||||||| ||| ||||||||||| |||| ||||| |||| ||||||||| |||||||||||    
T  34332171 taatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgccata 34332109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 6850420 - 6850387
Alignment:
Q  207 tctcataaacccaaatatggtttttgttccggtc 240  Q
    ||||||||||||||||||||||||||||||||||    
T  6850420 tctcataaacccaaatatggtttttgttccggtc 6850387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 10280619 - 10280555
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttgg--atgtaccataaaatttgccata 164  Q
    |||||||| |||| |||||||||||||||||||||||||||   |||||| ||||| ||||||||    
T  10280619 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtgtaccttaaaacttgccata 10280555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 34047764 - 34047825
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  34047764 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgccat 34047825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 40154534 - 40154489
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  40154534 ggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcc 40154489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 6800119 - 6800183
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||| || |||| |||||||||||||||||||||  |||  |||||||||||||||||| ||||    
T  6800119 taattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgccttatt 6800183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 37161563 - 37161503
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| | |||||| |||||||||||||||||| |||| |||| || ||||||    
T  37161563 taatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcca 37161503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 2273069 - 2273010
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||    
T  2273069 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 2666564 - 2666505
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| | || ||||||||| |||||||||| |||| ||||||||||| ||||||||    
T  2666564 taatttaatgctttggtgtaccagtacactcaaaatgttagatgtaccatagaatttgcc 2666505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 25838252 - 25838189
Alignment:
Q  46 ttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctaatttaa 109  Q
    |||| ||| |||||||  |||||||||||||||||||| ||||| |||||| |||||| |||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactctattttaa 25838189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 29705466 - 29705528
Alignment:
Q  12 ttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    |||||||||||||| ||  | |||||||||| |||||| ||||||| |||||||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 27847516 - 27847458
Alignment:
Q  103 aatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||| | || ||||||||| |||||||||| | |||||||||||||| ||||||||    
T  27847516 aatttaatgttttggtgtaccagtacactcaaaatattggatgtaccatagaatttgcc 27847458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 5215683 - 5215732
Alignment:
Q  117 gtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||| ||||||||||| | |||  |||||||||||||||||||||||    
T  5215683 gtgtaccgatacactcaaaatattgagtgtaccataaaatttgccatatt 5215732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 17096642 - 17096687
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  17096642 ggtgtaccgatacactcaaaatgttgggtgtaccatagaatttgcc 17096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 32071591 - 32071652
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||||||| ||||  ||||||| || |||||||||| || | ||||||||||||||||||||    
T  32071591 taatttaacgatttcgtgtaccgattcactcaaatttttcggtgtaccataaaatttgccat 32071652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 34058191 - 34058240
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||| | |||||||| | |||||||||||||||| ||||||||||||    
T  34058191 ggtgtacaagtacactcagaatgttggatgtaccatagaatttgccatat 34058240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 36886509 - 36886566
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||  ||| |||||||| ||| ||||||||| || ||||||||||||||||||    
T  36886509 taatttaataatttggtgtaccgatatactcaaatttttagatgtaccataaaatttg 36886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 26439879 - 26439931
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcca 162  Q
    |||||||||||||||| |||||||||| || || ||||||||| |||||||||    
T  26439879 gattgggtgtaccaatgcactcaaattttttgagtgtaccatagaatttgcca 26439931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 35970733 - 35970685
Alignment:
Q  117 gtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||| ||||||||||||||| |||||||||| ||| |||||| |||||    
T  35970733 gtgtatcaatacactcaaatttttggatgtactatataatttgtcatat 35970685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38229528 - 38229429
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||| | |  |||||||||| || |||||||||||||| |||||||| | | | |||||||||||||||  |||  ||||||||| |||    
T  38229528 agaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcataact 38229430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3434662 - 3434560
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3434662 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 3434563  T
Q  101 cta 103  Q
    |||    
T  3434562 cta 3434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7389489 - 7389388
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7389489 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 7389390  T
Q  101 ct 102  Q
    ||    
T  7389389 ct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19329942 - 19329842
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19329942 agaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattact 19329843  T
Q  101 c 101  Q
    |    
T  19329842 c 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36361913 - 36362015
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  36361913 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattact 36362012  T
Q  101 cta 103  Q
    |||    
T  36362013 cta 36362015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8080383 - 8080484
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8080383 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 8080482  T
Q  101 ct 102  Q
    ||    
T  8080483 ct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38267140 - 38267040
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  38267140 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattact 38267041  T
Q  101 c 101  Q
    |    
T  38267040 c 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36362126 - 36362024
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  36362126 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattact 36362027  T
Q  101 cta 103  Q
    |||    
T  36362026 cta 36362024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19436187 - 19436288
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  19436187 agaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattact 19436286  T
Q  101 ct 102  Q
    ||    
T  19436287 ct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38837317 - 38837216
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||| ||||||||||||||||||    
T  38837317 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattact 38837218  T
Q  101 ct 102  Q
    ||    
T  38837217 ct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35137633 - 35137533
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  35137633 agaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattact 35137534  T
Q  101 c 101  Q
    |    
T  35137533 c 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3784095 - 3783998
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  3784095 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4999514 - 4999614
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  4999514 agaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 4999613  T
Q  101 c 101  Q
    |    
T  4999614 c 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40957807 - 40957706
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  40957807 agaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattact 40957708  T
Q  101 ct 102  Q
    ||    
T  40957707 ct 40957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  7 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||||||||||||||| ||| | ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21234501 - 21234401
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||||||||||||||| || ||| |||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||    
T  21234501 agaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataact 21234402  T
Q  101 c 101  Q
    |    
T  21234401 c 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32951493 - 32951592
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||| || |||||  ||||||||||||||||||    
T  32951493 agaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3694467 - 3694370
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||| ||| ||| ||||||||    
T  3694467 agaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8238313 - 8238212
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccaccta-aggatgtctatgtatcattac 99  Q
    ||||||||| |||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||||| ||    
T  8238313 agaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataac 8238214  T
Q  100 tc 101  Q
    ||    
T  8238213 tc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18207279 - 18207179
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| ||||| |||||| | |||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |||    
T  18207279 agaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataact 18207181  T
Q  101 ct 102  Q
    ||    
T  18207180 ct 18207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35522976 - 35522881
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||||||||||||||| ||||  || | ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  35522976 agaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38044297 - 38044196
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || |||| |||||||||||||| ||| |||||| |||||||||||||||||||| ||| |||||||||| |||    
T  38044297 agaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 38044198  T
Q  101 ct 102  Q
    ||    
T  38044197 ct 38044196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39255924 - 39256023
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||| || ||||||||| | ||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||| |||    
T  39255924 agaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataact 39256022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11044278 - 11044187
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11044278 agaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattact 11044189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22343461 - 22343359
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  ||   || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  22343461 agaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 22343362  T
Q  101 cta 103  Q
    |||    
T  22343361 cta 22343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41915841 - 41915739
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  41915841 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 41915742  T
Q  101 cta 103  Q
    |||    
T  41915741 cta 41915739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 46033809 - 46033903
Alignment:
Q  9 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    ||||||||||| || || ||||| ||||||||||||||| | ||||||| |||||||||||||||||||||| || |||||||||||| ||||||    
T  46033809 tgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactcta 46033903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36208273 - 36208172
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||||| ||||||||||||| || |||||| ||||||| |||||||||| |  |||||| |||||||||| |||||||||||||| |||    
T  36208273 agaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataact 36208174  T
Q  101 ct 102  Q
    ||    
T  36208173 ct 36208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40846113 - 40846213
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||  ||||||||||||||  | ||||| ||| |||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||| |||    
T  40846113 agaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataact 40846212  T
Q  101 c 101  Q
    |    
T  40846213 c 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 41913441 - 41913500
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  41913441 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgcc 41913500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32564426 - 32564526
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||  ||||||||||||||  |  | || |||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||| |||    
T  32564426 agaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataact 32564525  T
Q  101 c 101  Q
    |    
T  32564526 c 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26296744 - 26296642
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| || ||||||||||||||||  || | |||| |||||||||| | ||| ||| ||||||| ||||| |||||||||||||||||||||||| |||    
T  26296744 agaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataact 26296645  T
Q  101 cta 103  Q
    |||    
T  26296644 cta 26296642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35468855 - 35468956
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| |||||| |||||||| ||   || | | |||||||| | ||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  35468855 agaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattact 35468954  T
Q  101 ct 102  Q
    ||    
T  35468955 ct 35468956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 41331786 - 41331725
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  41331786 atttaaggatttggtgtaccaatacactcaaattgttaggtgtaccataaaacttgccatat 41331725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 10343597 - 10343664
Alignment:
Q  35 gtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||| ||||||||||   ||||||| |||||||||| ||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31735977 - 31735884
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||| ||| | ||||||       |||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  31735977 agaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataact 31735885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7728006 - 7727905
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  |||| || |||||||||||| | ||  ||||||  |||||||| |||||||||| ||| |||||||||| |||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataact 7727907  T
Q  101 ct 102  Q
    ||    
T  7727906 ct 7727905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 1691338 - 1691394
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||    
T  1691338 taatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 3909987 - 3909927
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||  ||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  3909987 taatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcca 3909927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 21699636 - 21699696
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||| ||||    
T  21699636 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaattcgcca 21699696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 28326740 - 28326684
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||    
T  28326740 taatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 31903432 - 31903496
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||| |||| ||||||| |||||    
T  31903432 taatttaaggatttgatgtaccaatacattcaaattgttggatgtatcatataatttgctatatt 31903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 45458757 - 45458693
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||| |||| |||||||| ||||    
T  45458757 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgccctatt 45458693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 23331759 - 23331700
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||||||||||||   ||||||||| ||||||||    
T  23331759 taatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcc 23331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 30862848 - 30862789
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  30862848 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 9682373 - 9682439
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  9682373 taatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgccatttttt 9682439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 41423774 - 41423682
Alignment:
Q  9 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||| |||| || ||||||| || |||||||||||||| |  |||||||  |||||||| ||| |||| |||||||||||||||| ||||    
T  41423774 tgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 43750125 - 43750073
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||||    
T  43750125 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccat 43750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2318243 - 2318338
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    ||||||| ||||| ||  ||||||||||||| ||  ||||||||||||| ||||||||||  ||||| |||||||||| || |||  |||||||||    
T  2318243 agaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 40941934 - 40941871
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||| ||||  |||||||||||||||||||||||||  ||||||||| |||||| |||||    
T  40941934 taatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaatttgtcatat 40941871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16374824 - 16374894
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattg 71  Q
    |||| ||||||||||| | | |||||||||| ||||||||||||||||| ||| |||||| || |||||||    
T  16374824 agaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 24000987 - 24000918
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||  ||  ||||||||||||||||    
T  24000987 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactcta 24000918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 45223111 - 45223041
Alignment:
Q  32 tacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||||||||||| | | |||  |||  ||||||||||||||||||||| ||| ||||||||||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactct 45223041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 47748149 - 47748215
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    ||||||||||| | ||| |||||||||| ||||||| || | ||||||||||||||| |||||||||    
T  47748149 taatttaaggacttggtataccaatacattcaaatttttaggtgtaccataaaatttcccatatttt 47748215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 27956433 - 27956376
Alignment:
Q  105 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||| |||| |||||||||||| |||||||||||| | ||||||||| |||||||||    
T  27956433 tttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcca 27956376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 18990150 - 18990090
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||| |||||||||    
T  18990150 taatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 18990090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 30624070 - 30624134
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||  ||| |||||||||||||||||||||| |||| ||||||||| || ||||| ||||    
T  30624070 taatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgccttatt 30624134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 41381553 - 41381497
Alignment:
Q  105 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||| |||| | ||||||||||||||||||||||| | ||||||||| ||||||||    
T  41381553 tttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgcc 41381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 42538406 - 42538339
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||  ||  ||||||||||||||    
T  42538406 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactc 42538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 42710990 - 42710931
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||| |||| ||||| || ||||||||||| ||||||||    
T  42710990 taatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgcc 42710931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 44964168 - 44964231
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||| |||| | |||||||||||||||||||  || | ||||||||| ||||||||||||    
T  44964168 taatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgccatat 44964231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 45857821 - 45857880
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||    
T  45857821 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 45857880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27744309 - 27744375
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgt 67  Q
    ||||| ||||||| || ||| |||||||| | || |||||||||||||| ||||| |||||||||||    
T  27744309 agaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 27800384 - 27800434
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||| ||||||||  |||||||||||| |||||||||||||| ||||||||    
T  27800384 gatttggtgtaccggtacactcaaatttttggatgtaccatagaatttgcc 27800434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 41861801 - 41861842
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  41861801 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccac 41861842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 1343064 - 1343019
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||||||||||||||||| ||||||||| ||||||||    
T  1343064 ggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 1343019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 12395239 - 12395194
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  |||||||||| |||||| ||||||||||||||||||    
T  12395239 ggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 12395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 25411987 - 25412032
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  25411987 ggtgtaccggtacactcaaaatgttggatgtaccatacaatttgcc 25412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 30891338 - 30891277
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 162  Q
    |||||||| || || |||||||| ||||||||||| | |||||||||||||| |||||||||    
T  30891338 taatttaaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaatttgcca 30891277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 43069139 - 43069074
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 167  Q
    ||||||||  ||| ||||||||||||||||||| |  || | |||||||||||||||||| |||||    
T  43069139 taatttaataatttggtgtaccaatacactcaagtctttaggtgtaccataaaatttgccttattt 43069074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 22904850 - 22904898
Alignment:
Q  113 ttgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||| ||||||  |||||||||| |||||| ||||||||||||||||||    
T  22904850 ttggatgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 22904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 38129732 - 38129792
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||  ||| |||||||||||||||||||||| |||| | ||||||| || ||||||    
T  38129732 taatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcca 38129792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 42974955 - 42974895
Alignment:
Q  101 ctaatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| |||| ||||||||||| |||||| ||  |||| ||||||||| ||||||||    
T  42974955 ctaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9058580 - 9058474
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9058580 agaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 9058481  T
Q  101 ctaattt 107  Q
    || ||||    
T  9058480 cttattt 9058474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28863555 - 28863453
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  28863555 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattatt 28863456  T
Q  101 cta 103  Q
    |||    
T  28863455 cta 28863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33436100 - 33436201
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33436100 agaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 33436199  T
Q  101 ct 102  Q
    ||    
T  33436200 ct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7465735 - 7465838
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  7465735 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 7465834  T
Q  101 ctaa 104  Q
    ||||    
T  7465835 ctaa 7465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32505648 - 32505750
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  101 cta 103  Q
    |||    
T  32505748 cta 32505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10249382 - 10249483
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  10249382 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 10249481  T
Q  101 ct 102  Q
    ||    
T  10249482 ct 10249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13438443 - 13438343
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  13438443 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattact 13438344  T
Q  101 c 101  Q
    |    
T  13438343 c 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17473120 - 17473020
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17473120 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattact 17473021  T
Q  101 c 101  Q
    |    
T  17473020 c 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5574488 - 5574590
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  5574488 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 5574587  T
Q  101 cta 103  Q
    |||    
T  5574588 cta 5574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20700915 - 20700814
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||||||||||||    
T  20700915 agaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattact 20700816  T
Q  101 ct 102  Q
    ||    
T  20700815 ct 20700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30915563 - 30915462
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  30915563 agaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattact 30915464  T
Q  101 ct 102  Q
    ||    
T  30915463 ct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40613902 - 40614002
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40613902 agaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 40614001  T
Q  101 c 101  Q
    |    
T  40614002 c 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40701578 - 40701478
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  40701578 agaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattact 40701479  T
Q  101 c 101  Q
    |    
T  40701478 c 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19930820 - 19930917
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19930820 agaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27864804 - 27864704
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  27864804 agaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattact 27864705  T
Q  101 c 101  Q
    |    
T  27864704 c 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28381655 - 28381755
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  28381655 agaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattact 28381754  T
Q  101 c 101  Q
    |    
T  28381755 c 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38273142 - 38273243
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||||||||||||||| |||    
T  38273142 agaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataact 38273241  T
Q  101 ct 102  Q
    ||    
T  38273242 ct 38273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4060785 - 4060685
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||| ||| ||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 4060686  T
Q  101 c 101  Q
    |    
T  4060685 c 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38882811 - 38882914
Alignment:
Q  1 agaaagtgtgcttgtgcgggg---tccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 97  Q
    |||||||| ||||||||||||   |||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  38882811 agaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcatt 38882909  T
Q  98 actct 102  Q
    |||||    
T  38882910 actct 38882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 2533221 - 2533121
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  2533221 aaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactct 2533123  T
Q  103 aa 104  Q
    ||    
T  2533122 aa 2533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42257293 - 42257192
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||| | ||||||||||| | ||||||||||||||| |||||||||||||||| |||    
T  42257293 agaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataact 42257194  T
Q  101 ct 102  Q
    ||    
T  42257193 ct 42257192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45097735 - 45097836
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| |||    
T  45097735 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataact 45097834  T
Q  101 ct 102  Q
    ||    
T  45097835 ct 45097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33436311 - 33436209
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||   |||||| ||   ||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  33436311 agaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattact 33436212  T
Q  101 cta 103  Q
    |||    
T  33436211 cta 33436209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26891504 - 26891605
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||||||||| || |||||||||||| || |||||||||||||| |||||||| | |||||||||||||||||||| || ||||||||||| |||    
T  26891504 agaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataact 26891603  T
Q  101 ct 102  Q
    ||    
T  26891604 ct 26891605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 3383534 - 3383598
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3383534 taatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgccatatt 3383598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 5092056 - 5091990
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 168  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  5092056 taatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgccatatttt 5091990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17820004 - 17820110
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| |||| ||||| ||||||||||| || || |||||||||||||| |||||||||| |||||||||||||||||  | |||||||||||||| |||    
T  17820004 agaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataact 17820103  T
Q  101 ctaattt 107  Q
    | |||||    
T  17820104 caaattt 17820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36168936 - 36168834
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||| ||||||||||||||||| ||| | |||||||| |||||||| |||| || ||||| ||||||| || ||||||||||||||||||||| |||    
T  36168936 agaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataact 36168837  T
Q  101 cta 103  Q
    |||    
T  36168836 cta 36168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41575238 - 41575138
Alignment:
Q  1 agaaagtgtgcttgtgc-ggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattac 99  Q
    ||||||||||||||||  ||||||||| |||| || ||||| |||||||| ||  |||||||||||||||| ||| ||||||||||||||||||||||||    
T  41575238 agaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattac 41575139  T
Q  100 t 100  Q
    |    
T  41575138 t 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 43490219 - 43490121
Alignment:
Q  3 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 101  Q
    ||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||| ||||||||| ||| |||||||||| ||||    
T  43490219 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 11227686 - 11227625
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11227686 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgccat 11227625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2997487 - 2997567
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| ||||||||||||||||||||    
T  2997487 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38732454 - 38732354
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  |||| || |||||||||||||| |||||||||| || ||||||| ||| ||||| ||| |||||||||| |||    
T  38732454 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataact 38732355  T
Q  101 c 101  Q
    |    
T  38732354 c 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 4673949 - 4674008
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  4673949 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 4674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3440079 - 3439985
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 95  Q
    ||||| |||||||||||||||||||||| |  || ||| |||||||||| |||||||| | | |||||||||||||||||| |||||| ||||||    
T  3440079 agaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 6884218 - 6884161
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  6884218 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 38963411 - 38963476
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 167  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  38963411 taatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgccttattt 38963476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 11813544 - 11813600
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  11813544 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 17823853 - 17823783
Alignment:
Q  32 tacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||||||||||| |||||||  | |  ||||||||||||||||||||| ||||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactct 17823783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 5389548 - 5389605
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  5389548 taatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 33423363 - 33423420
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||||    
T  33423363 taatttaaggatttggtgtaccaatacattcaaattgttagatgtaccatagaatttg 33423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 34438533 - 34438594
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||||||  |||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34438533 taatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgccat 34438594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 34665630 - 34665573
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||    
T  34665630 taatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaatttg 34665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 42427918 - 42427979
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||||    
T  42427918 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccat 42427979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 42046132 - 42046076
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 160  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||    
T  42046132 atttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaatttgc 42046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 14533169 - 14533228
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||| | |||||||||| ||||||||| ||||||||    
T  14533169 taatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcc 14533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 1353564 - 1353507
Alignment:
Q  104 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||| |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  1353564 atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgcc 1353507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3738043 - 3737986
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtc 58  Q
    ||||| |||||||||||||||||||| |||| || |||||||||||||| ||||||||    
T  3738043 agaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13365453 - 13365373
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    ||||||||| |||||||||||||||  ||   || |||||||||||||| |||||||||| |||| |||||||| ||||||    
T  13365453 agaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 37083267 - 37083211
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||  ||| |||||||||||||||| |||||||||||||||||||| |||||    
T  37083267 taatttaaaaattcggtgtaccaatacacttaaattgttggatgtaccatataattt 37083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 58979 - 58920
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| | |||||||||||||||||||| |||| ||||||||| | ||||||    
T  58979 taatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagattttgcc 58920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 15771657 - 15771720
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||| ||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||    
T  15771657 taatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgccatat 15771720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 15428775 - 15428841
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||||||| || |||| || |||||||| ||||| ||||||||| |||||||||| |||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactct 15428841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 39620251 - 39620191
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 161  Q
    |||||||| || |||||||||| |||||||||||| | |||| ||||||||||||||||||    
T  39620251 taatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 11598165 - 11598114
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcc 161  Q
    ||||||||||||||||||||||||||| || || ||||||||| ||||||||    
T  11598165 gattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 11598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 40288051 - 40288110
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||||  |||||||||| | ||| |||||||||||||||||||    
T  40288051 taatttaacgatttggtgtaccggtacactcaaaattttgaatgtaccataaaatttgcc 40288110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 7069239 - 7069193
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    ||||||||  |||||||||| |||||| |||||||||||||||||||    
T  7069239 ggtgtacccgtacactcaaaatgttgggtgtaccataaaatttgcca 7069193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 7467161 - 7467119
Alignment:
Q  120 taccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||||||||||||| |||| ||||||||| |||||||||    
T  7467161 taccaatacactcaaatttttgggtgtaccatagaatttgcca 7467119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 12547423 - 12547361
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 164  Q
    |||||||| |||| |||||| ||||||||||| ||  |||| ||||||||| |||||||||||    
T  12547423 taatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgccata 12547361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 18576672 - 18576718
Alignment:
Q  116 ggtgtaccaatacactcaaattg-ttggatgtaccataaaatttgcc 161  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  18576672 ggtgtaccaatacacccaaatttattggatgtaccataaaatttgcc 18576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 41758655 - 41758593
Alignment:
Q  31 ctacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 93  Q
    ||||||||||||||||| ||| ||||||||| ||| |||| ||||||||  ||||| ||||||    
T  41758655 ctacgtgtcagatttttatataggtgtcaaaaggtatattaccacctaaaaatgtccatgtat 41758593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 43490376 - 43490335
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccac 75  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  43490376 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccac 43490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 4108352 - 4108307
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  4108352 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgcc 4108307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 8371913 - 8371970
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||  ||| |||||| ||||||||| ||||| |||||||||||||| ||||||    
T  8371913 taatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaatttg 8371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 15206083 - 15206148
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaa-ttgttggatgtaccataaaatttgccatatt 166  Q
    |||||||| |||| ||||||||| |||||||||| || || |||||| |||| |||||||||||||    
T  15206083 taatttaacgatttggtgtaccagtacactcaaattttttagatgtatcatagaatttgccatatt 15206148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 15426370 - 15426427
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||  ||| ||||||||  |||||||||||||||||||||||  |||||||||    
T  15426370 taatttaataatttggtgtaccggtacactcaaattgttggatgtactgtaaaatttg 15426427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 5615434 - 5615378
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    |||||||| |||| | ||||||  |||||||||||| |||||||||||||| |||||    
T  5615434 taatttaacgatttgatgtaccggtacactcaaatttttggatgtaccatagaattt 5615378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 12071198 - 12071158
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccataaaattt 158  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  12071198 tgtaccaatacactcaaattgttgggtataccatagaattt 12071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 32499209 - 32499149
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  |||| |||||| ||||||||||||||| || | ||||||||| |||||||||    
T  32499209 taatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcca 32499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32869778 - 32869678
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  32869778 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttact 32869679  T
Q  101 c 101  Q
    |    
T  32869678 c 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22880658 - 22880755
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22880658 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17598654 - 17598554
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  17598654 agaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattact 17598555  T
Q  101 c 101  Q
    |    
T  17598554 c 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11427718 - 11427614
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccaccta--aggatgtctatgtatcatta 98  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  11427718 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcatta 11427619  T
Q  99 ctcta 103  Q
    |||||    
T  11427618 ctcta 11427614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31976348 - 31976246
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||    
T  31976348 agaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataact 31976249  T
Q  101 cta 103  Q
    |||    
T  31976248 cta 31976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6209465 - 6209566
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||||||| ||||||||||||||||||    
T  6209465 agaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattact 6209564  T
Q  101 ct 102  Q
    ||    
T  6209565 ct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31109400 - 31109500
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||  |||||||||    
T  31109400 agaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattact 31109499  T
Q  101 c 101  Q
    |    
T  31109500 c 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31110761 - 31110860
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||||| ||||||| |||  ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  31110761 agaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgt--gagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 31110858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29857927 - 29857827
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||| |||| | ||||||||||||||||||    
T  29857927 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattact 29857828  T
Q  101 c 101  Q
    |    
T  29857827 c 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28536488 - 28536582
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 97  Q
    |||||||||||||||| ||||||||| ||||  |||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||    
T  28536488 agaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15990042 - 15990148
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  15990042 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 15990141  T
Q  101 ctaattt 107  Q
    || ||||    
T  15990142 cttattt 15990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23128127 - 23128224
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 98  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| ||| | ||||||| ||||||||    
T  23128127 agaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30341360 - 30341461
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  30341360 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 30341459  T
Q  101 ct 102  Q
    ||    
T  30341460 ct 30341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15508024 - 15508124
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||    
T  15508024 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 15508123  T
Q  101 c 101  Q
    |    
T  15508124 c 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31953030 - 31953130
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||| ||||| | ||||||| |||  || |||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31953030 agaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattact 31953129  T
Q  101 c 101  Q
    |    
T  31953130 c 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4231648 - 4231548
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||| |||||||||||||||  || | ||||||||||||||||| |||||| ||| |||||||||||||||||| ||||| |||| ||||| |||    
T  4231648 agaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataact 4231549  T
Q  101 c 101  Q
    |    
T  4231548 c 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 946476 - 946377
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||| | ||||| |  ||||||||| ||||||||||||||  | ||||||||||||||||||  |||||||||||||||||||||| |||||    
T  946476 agaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 15832666 - 15832576
Alignment:
Q  12 ttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||||||| | | ||||| ||||||| | ||||||||||||||||||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactct 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 9379744 - 9379807
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 96  Q
    |||||||| ||||||||||||||||||| || ||||||| || |||||||||||||||||||||    
T  9379744 acgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 22422053 - 22422120
Alignment:
Q  36 tgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 103  Q
    ||||||| ||||||||| |||||||  | | |||||||||||||||||||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactcta 22422120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 24212971 - 24212912
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||    
T  24212971 taatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgcc 24212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 2258962 - 2258905
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||    
T  2258962 taatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 4901296 - 4901353
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||    
T  4901296 taatttaaggatttaatgtaccaatacactcaaattgttagatgtaccataaaatttg 4901353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 12732550 - 12732481
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    ||||||||||||||||| |||||||||| |  | ||||||||| |||| |||||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactct 12732481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 17545664 - 17545607
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  17545664 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 8401763 - 8401822
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  8401763 taatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcc 8401822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 13390444 - 13390385
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  13390444 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 13390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 26315506 - 26315447
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  ||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  26315506 taatttaataatttggtgtaccggtacactcaaattgttggatgtaccataaaatttgcc 26315447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 26358900 - 26358959
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||| || |||||    
T  26358900 taatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 26358959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 6848569 - 6848508
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    |||||||||||||  || ||||||| ||||||||||||||| ||||||||| ||||||||||    
T  6848569 taatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgccat 6848508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 24487634 - 24487683
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccat 151  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  24487634 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 10888173 - 10888216
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  10888173 tgtaccagtacactcaaattgttggatgtaccatataatttgcc 10888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 15383551 - 15383610
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||  |||| ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  15383551 taatttactgatttggtataccaatacactcaaatttttggatgtaccatataatttgcc 15383610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 32834121 - 32834180
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||||||| ||||||||    
T  32834121 taatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgcc 32834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 7344677 - 7344727
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 166  Q
    ||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  7344677 ggtgtaccggtacactcaaattgttgggtgtaccatagaatttgccatatt 7344727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 926583 - 926542
Alignment:
Q  118 tgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  926583 tgtaccagtacactcaaaatgttggatgtaccataaaatttg 926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 9698308 - 9698240
Alignment:
Q  33 acgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||  ||  |||||||||||||||    
T  9698308 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactct 9698240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30870114 - 30870058
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgt 57  Q
    ||||| ||||||||||||||||||| ||||| || ||| |||||||| |||||||||    
T  30870114 agaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 11446795 - 11446732
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 165  Q
    |||||||  |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||||||    
T  11446795 taatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccatat 11446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 14501071 - 14501026
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  14501071 ggtgtaccggtacactcaaaatgttggatgtaccatataatttgcc 14501026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 8376385 - 8376429
Alignment:
Q  116 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 160  Q
    |||||||||||||| |||||||  | |||||||||||||||||||    
T  8376385 ggtgtaccaatacattcaaatttgtagatgtaccataaaatttgc 8376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 11273779 - 11273823
Alignment:
Q  117 gtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  11273779 gtgtaccgatacactcaaaatgttagatgtaccatagaatttgcc 11273823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 28536678 - 28536714
Alignment:
Q  66 gtattgccacctaaggatgtctatgtatcattactct 102  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  28536678 gtattgccacctaaggatgtatatgtatcatttctct 28536714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 929 - 1029
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  929 agaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattact 1028  T
Q  101 c 101  Q
    |    
T  1029 c 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 929 - 1029
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  929 agaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattact 1028  T
Q  101 c 101  Q
    |    
T  1029 c 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10109 - 10210
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| | |||||||||||||| |||    
T  10109 agaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataact 10208  T
Q  101 ct 102  Q
    ||    
T  10209 ct 10210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4129 - 4029
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||| |||| | ||||||||||||||||||    
T  4129 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattact 4030  T
Q  101 c 101  Q
    |    
T  4029 c 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8863 - 8969
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 100  Q
    ||||| ||| |||||| |||||||||||||||| |||||| |||||||| | | |||||||  |||||||| ||| ||||||||||||| |||||| |||    
T  8863 agaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataact 8962  T
Q  101 ctaattt 107  Q
    | |||||    
T  8963 caaattt 8969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 152598 - 152518
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccacctaagg 81  Q
    |||||||||  ||||||||| ||||  |||| || |||||||||||||| |||||||||| ||||||||||||||| ||||    
T  152598 agaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 36956 - 37015
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 161  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||    
T  36956 taatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 37015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17154 - 17077
Alignment:
Q  1 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtatgggtgtcaaagggtgtattgccaccta 78  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||||||| ||| |||| | || |||||||| |||||    
T  17154 agaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

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Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 29295 - 29243
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 163  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||| ||||    
T  29295 gattgggtgtaccaatacactcaaatttttgggtgtaccattaaatttaccat 29243  T

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Target: scaffold0625 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 6610 - 6670
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 162  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||| |||||||||    
T  6610 taatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 6670  T

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Target: scaffold0604 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 2070 - 2022
Alignment:
Q  111 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 159  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||    
T  2070 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

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Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 48069 - 48033
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaattg 138  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48069 taatttaaggatttggtgtaccaatacactcaaattg 48033  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 16929 - 16994
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatatt 166  Q
    |||||||| || || ||||||| |||||||||||| | |||| ||||||||| |||||||||||||    
T  16929 taatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgccatatt 16994  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 55915 - 55850
Alignment:
Q  102 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatatt 166  Q
    |||||||| || || ||||||| |||||||||||| | |||| ||||||||| |||||||||||||    
T  55915 taatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgccatatt 55850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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