View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9239_low_2 (Length: 1186)

Name: NF9239_low_2
Description: NF9239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9239_low_2
NF9239_low_2
[»] chr4 (34 HSPs)
chr4 (14-818)||(28929498-28930316)
chr4 (854-1067)||(28929249-28929462)
chr4 (448-593)||(5609202-5609347)
chr4 (448-621)||(40058852-40059025)
chr4 (1003-1062)||(10184480-10184539)
chr4 (448-594)||(34844758-34844904)
chr4 (664-751)||(602542-602629)
chr4 (574-621)||(37980145-37980192)
chr4 (471-621)||(54127365-54127515)
chr4 (574-621)||(56409982-56410029)
chr4 (562-655)||(29195093-29195186)
chr4 (449-594)||(52983670-52983815)
chr4 (270-327)||(10185559-10185616)
chr4 (447-590)||(34723854-34723997)
chr4 (448-591)||(45787704-45787847)
chr4 (571-654)||(4088242-4088324)
chr4 (448-594)||(27528795-27528941)
chr4 (448-594)||(32986248-32986394)
chr4 (578-653)||(38206127-38206201)
chr4 (521-621)||(13771555-13771656)
chr4 (574-646)||(37492715-37492785)
chr4 (449-509)||(42508382-42508442)
chr4 (448-594)||(19660532-19660678)
chr4 (574-621)||(21344848-21344895)
chr4 (574-621)||(25434656-25434703)
chr4 (575-653)||(37109349-37109427)
chr4 (575-621)||(7093400-7093446)
chr4 (447-509)||(23639760-23639822)
chr4 (447-509)||(23645418-23645480)
chr4 (583-621)||(42281240-42281278)
chr4 (521-621)||(25852238-25852338)
chr4 (580-621)||(31141347-31141388)
chr4 (474-594)||(33696305-33696425)
chr4 (562-646)||(37455576-37455660)
[»] chr5 (24 HSPs)
chr5 (447-621)||(15485290-15485464)
chr5 (448-621)||(32059440-32059613)
chr5 (448-570)||(4603853-4603974)
chr5 (448-594)||(8484661-8484807)
chr5 (448-594)||(27498731-27498877)
chr5 (467-609)||(31206278-31206421)
chr5 (448-621)||(12398448-12398621)
chr5 (448-621)||(19145412-19145584)
chr5 (573-646)||(16172980-16173052)
chr5 (448-594)||(18207258-18207404)
chr5 (472-621)||(16247025-16247174)
chr5 (448-594)||(19456211-19456355)
chr5 (448-621)||(30485852-30486025)
chr5 (472-621)||(33025504-33025653)
chr5 (448-621)||(31287946-31288119)
chr5 (448-567)||(9659311-9659429)
chr5 (448-495)||(10837446-10837493)
chr5 (574-621)||(31669022-31669069)
chr5 (448-594)||(38684259-38684404)
chr5 (578-644)||(14656645-14656710)
chr5 (472-570)||(22253168-22253266)
chr5 (464-509)||(23016719-23016764)
chr5 (580-621)||(32340340-32340381)
chr5 (525-621)||(36895449-36895545)
[»] chr2 (26 HSPs)
chr2 (450-654)||(43963866-43964065)
chr2 (456-621)||(26176206-26176370)
chr2 (448-595)||(15038009-15038156)
chr2 (468-570)||(35943759-35943861)
chr2 (574-621)||(6099516-6099563)
chr2 (448-621)||(8192352-8192524)
chr2 (448-570)||(28668949-28669070)
chr2 (573-621)||(26482124-26482172)
chr2 (448-594)||(30466830-30466976)
chr2 (448-594)||(33827573-33827719)
chr2 (448-594)||(44946053-44946199)
chr2 (473-594)||(17324817-17324937)
chr2 (448-509)||(14486961-14487022)
chr2 (574-654)||(29503270-29503350)
chr2 (577-622)||(32526214-32526259)
chr2 (573-621)||(3697396-3697444)
chr2 (447-535)||(31778141-31778229)
chr2 (551-653)||(42327368-42327471)
chr2 (522-621)||(43374399-43374498)
chr2 (994-1049)||(35123980-35124035)
chr2 (448-535)||(41329952-41330039)
chr2 (447-509)||(6006889-6006951)
chr2 (447-509)||(6714294-6714356)
chr2 (448-530)||(7250339-7250420)
chr2 (448-494)||(9946676-9946722)
chr2 (448-570)||(11941210-11941331)
[»] chr3 (46 HSPs)
chr3 (467-654)||(34844370-34844555)
chr3 (448-621)||(48977412-48977585)
chr3 (471-595)||(51532839-51532963)
chr3 (476-595)||(7470244-7470362)
chr3 (448-594)||(15566500-15566645)
chr3 (448-594)||(35492962-35493108)
chr3 (448-594)||(49258262-49258408)
chr3 (448-570)||(10083819-10083940)
chr3 (448-570)||(10190742-10190863)
chr3 (447-651)||(10682815-10683017)
chr3 (517-609)||(27887464-27887557)
chr3 (448-621)||(30257648-30257821)
chr3 (575-621)||(31714348-31714394)
chr3 (573-651)||(42799744-42799821)
chr3 (572-621)||(18316494-18316543)
chr3 (448-592)||(53233911-53234054)
chr3 (447-547)||(10538126-10538225)
chr3 (448-595)||(40133449-40133596)
chr3 (448-590)||(8097279-8097421)
chr3 (448-594)||(8456150-8456296)
chr3 (574-653)||(11092167-11092245)
chr3 (448-594)||(26174164-26174310)
chr3 (448-594)||(46576399-46576545)
chr3 (448-594)||(52821636-52821781)
chr3 (574-655)||(40268487-40268567)
chr3 (448-509)||(50731237-50731298)
chr3 (448-509)||(50781556-50781617)
chr3 (448-496)||(7195956-7196004)
chr3 (448-567)||(8958035-8958154)
chr3 (577-621)||(35623267-35623311)
chr3 (448-594)||(25289715-25289860)
chr3 (470-509)||(26599450-26599489)
chr3 (447-570)||(32151500-32151622)
chr3 (448-594)||(39041852-39041998)
chr3 (464-507)||(53167681-53167724)
chr3 (521-595)||(53288785-53288859)
chr3 (448-594)||(53424177-53424322)
chr3 (467-509)||(3869845-3869887)
chr3 (544-621)||(7485620-7485698)
chr3 (574-651)||(19716199-19716276)
chr3 (473-594)||(25379812-25379933)
chr3 (520-570)||(39604682-39604732)
chr3 (467-505)||(40302665-40302703)
chr3 (575-621)||(53863866-53863912)
chr3 (575-620)||(40777045-40777090)
chr3 (573-621)||(54990733-54990782)
[»] chr6 (18 HSPs)
chr6 (450-622)||(17149458-17149630)
chr6 (448-621)||(9208276-9208449)
chr6 (467-621)||(6383893-6384047)
chr6 (449-594)||(9239026-9239171)
chr6 (473-594)||(11448922-11449043)
chr6 (448-621)||(15360098-15360271)
chr6 (448-594)||(1344986-1345132)
chr6 (448-592)||(34147399-34147543)
chr6 (448-592)||(34160015-34160159)
chr6 (447-594)||(654145-654292)
chr6 (447-567)||(28672146-28672265)
chr6 (448-594)||(3222636-3222781)
chr6 (448-567)||(9690638-9690756)
chr6 (575-617)||(6691549-6691591)
chr6 (473-594)||(12390476-12390597)
chr6 (17-149)||(30056724-30056857)
chr6 (551-621)||(14557993-14558064)
chr6 (577-620)||(28741970-28742013)
[»] chr8 (29 HSPs)
chr8 (448-621)||(18128541-18128714)
chr8 (448-621)||(4718673-4718846)
chr8 (448-594)||(32879334-32879480)
chr8 (449-594)||(28193529-28193674)
chr8 (448-595)||(2166753-2166897)
chr8 (448-594)||(34237655-34237801)
chr8 (448-621)||(3734623-3734796)
chr8 (517-621)||(26168918-26169021)
chr8 (556-621)||(40136942-40137007)
chr8 (556-654)||(16852339-16852438)
chr8 (574-653)||(6530807-6530885)
chr8 (467-534)||(9126482-9126549)
chr8 (448-594)||(21603285-21603431)
chr8 (521-607)||(24339696-24339782)
chr8 (448-594)||(39349311-39349457)
chr8 (448-570)||(42328084-42328205)
chr8 (575-651)||(3624582-3624658)
chr8 (448-592)||(34610687-34610831)
chr8 (448-591)||(8765526-8765669)
chr8 (556-654)||(18897165-18897264)
chr8 (448-595)||(20305962-20306109)
chr8 (448-595)||(21092595-21092742)
chr8 (556-621)||(11979283-11979350)
chr8 (575-618)||(29855417-29855460)
chr8 (448-507)||(34694575-34694634)
chr8 (521-622)||(27746408-27746509)
chr8 (574-654)||(19703484-19703564)
chr8 (580-621)||(22779686-22779727)
chr8 (577-653)||(33727873-33727949)
[»] chr1 (34 HSPs)
chr1 (467-655)||(37046983-37047170)
chr1 (471-595)||(30677226-30677350)
chr1 (448-594)||(4621237-4621383)
chr1 (448-594)||(24122074-24122220)
chr1 (532-653)||(39964505-39964626)
chr1 (471-617)||(2755594-2755741)
chr1 (448-594)||(15059402-15059548)
chr1 (574-653)||(15581139-15581217)
chr1 (448-594)||(24674444-24674590)
chr1 (447-509)||(1486556-1486618)
chr1 (521-621)||(9500428-9500528)
chr1 (447-567)||(1378977-1379095)
chr1 (574-621)||(4825002-4825050)
chr1 (574-622)||(6127984-6128032)
chr1 (483-594)||(8077698-8077809)
chr1 (470-530)||(20999185-20999245)
chr1 (574-621)||(31605845-31605893)
chr1 (449-509)||(37351454-37351514)
chr1 (578-621)||(24217002-24217045)
chr1 (574-621)||(38939233-38939280)
chr1 (448-654)||(39714650-39714855)
chr1 (473-594)||(7766752-7766873)
chr1 (449-594)||(17935820-17935965)
chr1 (572-621)||(21273471-21273521)
chr1 (449-535)||(34778449-34778535)
chr1 (577-655)||(39012289-39012366)
chr1 (551-609)||(52029909-52029970)
chr1 (447-509)||(52135262-52135324)
chr1 (577-622)||(13857843-13857888)
chr1 (467-591)||(16899557-16899681)
chr1 (576-617)||(18928367-18928408)
chr1 (448-509)||(27159221-27159282)
chr1 (453-570)||(32930825-32930941)
chr1 (580-621)||(47360517-47360558)
[»] scaffold0019 (1 HSPs)
scaffold0019 (448-594)||(161860-162006)
[»] chr7 (33 HSPs)
chr7 (448-595)||(654705-654851)
chr7 (448-594)||(22119943-22120089)
chr7 (448-594)||(40542910-40543056)
chr7 (448-621)||(2751299-2751472)
chr7 (447-594)||(7275332-7275479)
chr7 (448-594)||(27009414-27009561)
chr7 (448-594)||(18044162-18044308)
chr7 (574-653)||(25956290-25956368)
chr7 (448-597)||(11909954-11910103)
chr7 (448-509)||(12211535-12211596)
chr7 (561-655)||(43215182-43215277)
chr7 (513-597)||(1469164-1469248)
chr7 (448-594)||(22703541-22703687)
chr7 (448-594)||(29861725-29861871)
chr7 (575-653)||(33869443-33869521)
chr7 (448-570)||(2344379-2344500)
chr7 (448-621)||(11997877-11998050)
chr7 (463-508)||(674451-674496)
chr7 (521-594)||(36772376-36772448)
chr7 (448-509)||(38372980-38373041)
chr7 (574-653)||(5579231-5579310)
chr7 (474-570)||(23012534-23012629)
chr7 (551-618)||(25132352-25132420)
chr7 (448-594)||(10091243-10091388)
chr7 (448-594)||(17196950-17197096)
chr7 (448-594)||(21217833-21217979)
chr7 (575-653)||(26459408-26459486)
chr7 (448-594)||(41907514-41907659)
chr7 (448-535)||(42913513-42913600)
chr7 (449-621)||(19421259-19421431)
chr7 (577-622)||(22696347-22696392)
chr7 (467-540)||(23636584-23636657)
chr7 (448-509)||(27312292-27312353)
[»] scaffold0576 (1 HSPs)
scaffold0576 (448-621)||(5082-5255)
[»] scaffold0623 (1 HSPs)
scaffold0623 (447-594)||(1056-1202)
[»] scaffold0366 (2 HSPs)
scaffold0366 (448-594)||(9300-9445)
scaffold0366 (474-569)||(12027-12120)
[»] scaffold0160 (1 HSPs)
scaffold0160 (448-614)||(29143-29308)
[»] scaffold0015 (1 HSPs)
scaffold0015 (467-589)||(72545-72670)
[»] scaffold0026 (1 HSPs)
scaffold0026 (448-509)||(5967-6028)
[»] scaffold0070 (1 HSPs)
scaffold0070 (448-594)||(40376-40521)
[»] scaffold0049 (1 HSPs)
scaffold0049 (448-535)||(66864-66951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (448-569)||(32365-32484)
[»] scaffold0189 (1 HSPs)
scaffold0189 (573-617)||(17720-17764)
[»] scaffold0459 (1 HSPs)
scaffold0459 (474-569)||(10720-10813)
[»] scaffold0221 (1 HSPs)
scaffold0221 (557-622)||(2888-2955)
[»] scaffold0102 (1 HSPs)
scaffold0102 (448-594)||(39143-39289)
[»] scaffold1175 (1 HSPs)
scaffold1175 (448-554)||(2426-2531)


Alignment Details
Target: chr4 (Bit Score: 666; Significance: 0; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 666; E-Value: 0
Query Start/End: Original strand, 14 - 818
Target Start/End: Complemental strand, 28930316 - 28929498
Alignment:
Q  14 ggacatcatccaacccaaacacaccaacaaccatggcagcaaaataaactcagccgaagcctacagcacagaccgattgcagcaaaaccagaaaacaatt 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28930316 ggacaacatccaacccaaacacaccaacaaccatggcagcaaaataaactcagccgaagcctacagcacagaacgattgcagcaaaaccagaaaacaatt 28930217  T
Q  114 cattccaacctgacagaaataccatcaccttttaactgatagagcgccaag---gttnnnnnnnnn---cagtatttgaacagggaggttcactgaggtg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||            |||||||||||||||||||||||||||||||    
T  28930216 cattccaacctgacagaaataccatcaccttttaactgatagagcgccaagaaggttaaaaaaaaaaaacagtatttgaacagggaggttcactgaggtg 28930117  T
Q  208 attaatttgaacataccactattttctgaaatccgtgattgacaccatggttcgttgatgcgactaaacccaagaatgtatgtgcttcatagaattaacc 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28930116 attaatttgaacataacactattttctgaaatccgtgattgacaccatggttcgttgatgcgactaaacccaagaatgtatgtgcttcatagaattaacc 28930017  T
Q  308 attcataaatcaaaatactcaaccttcaaagttacattccttaataacatcattatatgtttaaaccaacctcatacaacttactgaccttacttttttc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28930016 attcataaatcaaaatactcaaccttcaaagttacattccttaataacatcattatatgtttaaaccaacctcatacaacttactgaccttacttttttc 28929917  T
Q  408 tttaaacagtcaatgttagtatgnnnnnnnnnnnnnnncaaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccact 507  Q
    |||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929916 tttaaacagtcaatgttagtatgttttttgtcttttttcaaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccact 28929817  T
Q  508 tgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataaggagaatcgaacctgagaccttgaaaggagcaca 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28929816 tgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataaggggaatcgaacctgagaccttgaaaggagcaca 28929717  T
Q  608 cttcaaggtcccaaagctaacactactaggtcaacccaaatgggttttaacgttaatatgttaatttgttagtatttgttgagttgggagtcgatctcaa 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28929716 cttcaaggtcccaaagctaacactactaggtcaacccaaatgggttttaacgttaatatgttaatttgttagtatttgttgaggtgggagtcgatctcaa 28929617  T
Q  708 gaccacccttatcactccacttcttaactctcccaccttagccaatagccgccaa--------tatatctaccgatttactaaccttcctacaggaacct 799  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  28929616 gaccacccttatcactccacttcttaactgtcccaccttagccaatagccgccaagtcaaccttatatctaccgatttactaaccttcctacaggaacct 28929517  T
Q  800 aagtgcaatttcacaacat 818  Q
    |||||||||||||||||||    
T  28929516 aagtgcaatttcacaacat 28929498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 854 - 1067
Target Start/End: Complemental strand, 28929462 - 28929249
Alignment:
Q  854 gttcattccataaagttacatgggctaataacatcatttgattcttaaaccaagctcgtacaatttactaacctaaatgtaataatttcataacaacaac 953  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929462 gttcattccataaagttacatgggctaataacatcatttgattcataaaccaagctcgtacaatttactaacctaaatgtaataatttcataacaacaac 28929363  T
Q  954 ttaaaaatgaaatttaaaagcgattaaagggatgacagtaatacctaagagtttcatctttaaccttcttagagaactcattgaagacactgtatcctcg 1053  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28929362 ttaaaaatgaaatttaaaagcgattaaagggatgacagtaatacctaagagtttcatctttaaccttcttagagaactcattgaagacactgtatcctcg 28929263  T
Q  1054 tcgatcaaccaaat 1067  Q
    ||||||||||||||    
T  28929262 tcgatcaaccaaat 28929249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 593
Target Start/End: Original strand, 5609202 - 5609347
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| ||||||  |||||| ||||||||||||   ||||| |||||||||||| |||| |||| ||||||    
T  5609202 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtatg 5609300  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacc 593  Q
     |||||| ||||| |||||||||  || |||||||||||||||||||    
T  5609301 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacc 5609347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 40058852 - 40059025
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 40058950  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || ||||||||||||||||||||  | ||||||| ||| |||| ||||||    
T  40058951 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaa 40059025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1003 - 1062
Target Start/End: Complemental strand, 10184539 - 10184480
Alignment:
Q  1003 agtttcatctttaaccttcttagagaactcattgaagacactgtatcctcgtcgatcaac 1062  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  10184539 agtttcatctttaaccttcttagagaattcattgaacacactgtatcctcgtctatcaac 10184480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 34844758 - 34844904
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  34844758 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 34844856  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || ||||||||||||||||||||    
T  34844857 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacct 34844904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 664 - 751
Target Start/End: Original strand, 602542 - 602629
Alignment:
Q  664 tatgttaatttgttagtatttgtt-gagttgggagtcgatctcaagaccacccttatcactccacttcttaactctcccaccttagcca 751  Q
    |||||||||| ||||||||||||| ||| ||||| | ||   |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  602542 tatgttaatt-gttagtatttgttagaggtgggaattgaatccaagaccacccttatcactccactccttaactctcccaccctagcca 602629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 37980145 - 37980192
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  37980145 ggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaa 37980192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 471 - 621
Target Start/End: Original strand, 54127365 - 54127515
Alignment:
Q  471 accgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    ||||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| |||||  |||||| ||||| |||||||||    
T  54127365 accgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatagacttagcccaccgaaattggca 54127463  T
Q  571 taag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     ||| | |||| ||||||||||||||   ||||||| ||| |||| ||||||    
T  54127464 caagagggaattgaacctgagacctttggaggagcaaactccaagatcccaa 54127515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 574 - 621
Target Start/End: Complemental strand, 56410029 - 56409982
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  56410029 ggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaa 56409982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 562 - 655
Target Start/End: Complemental strand, 29195186 - 29195093
Alignment:
Q  562 aaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtttt 655  Q
    |||||||||| || ||||||||||| || |||||||| ||||||||||| ||||||||| |||| ||||| || ||| |||||||| ||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttgagaggagcacactccaaggtccc-aagccaacaccaccaggccaacccaagtgggtttt 29195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 449 - 594
Target Start/End: Complemental strand, 52983815 - 52983670
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatga 548  Q
    ||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||     
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatgg 52983717  T
Q  549 acttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    |||||| ||||  |||||||||  || | ||||||||||||||||||    
T  52983716 acttagcccactgaaattggcaccagagggaatcgaacctgagacct 52983670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 10185616 - 10185559
Alignment:
Q  270 actaaacccaagaatgtatgtgcttcatagaattaaccattcataaatcaaaatactc 327  Q
    ||||||||||||| ||||||||||||||||||||   ||||||||||| |||||||||    
T  10185616 actaaacccaagagtgtatgtgcttcatagaattttacattcataaattaaaatactc 10185559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 590
Target Start/End: Complemental strand, 34723997 - 34723854
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||  ||| ||| | ||||||||| ||| || ||||||| |||  |||||||   ||||| | |||||||||| |||| ||||||||||    
T  34723997 aaaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagca-agctttgtat 34723899  T
Q  547 gaacttagaccacccaaattggcataag-gagaatcgaacctgag 590  Q
    | |||||| ||||| |||||||||  || | ||||||||||||||    
T  34723898 ggacttagcccaccgaaattggcaccagagggaatcgaacctgag 34723854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 448 - 591
Target Start/End: Original strand, 45787704 - 45787847
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| ||||||||||||   |||||   |||||||||| |||| |||| ||||||    
T  45787704 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagca-agctctgtatg 45787802  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgaga 591  Q
     |||||| ||||  |||||||||| || | |||||||||||||||    
T  45787803 gacttagcccactgaaattggcatcagagggaatcgaacctgaga 45787847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 571 - 654
Target Start/End: Complemental strand, 4088324 - 4088242
Alignment:
Q  571 taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggttt 654  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||  | |||| ||||| ||  || ||||||||||||||||    
T  4088324 taaggagaatcgaacctgagaccttgaaaggaccaccctccaaggtttc-aagccaacaccacgcggccaacccaaatgggttt 4088242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 27528795 - 27528941
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||  |||| |||||||   ||||| | | |||||||| |||| |||| ||||||    
T  27528795 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagca-agctctgtatg 27528893  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  27528894 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 27528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 32986394 - 32986248
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||| || |||||| ||||||| |||| |||||||   ||||| ||||||||| || |||| |||| ||||||    
T  32986394 aaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagca-agctctgtatg 32986296  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | |||| |||||||||||||    
T  32986295 gacttagcccaccgaaattggcaccagagggaattgaacctgagacct 32986248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 578 - 653
Target Start/End: Original strand, 38206127 - 38206201
Alignment:
Q  578 aatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| |||| | ||| || |||||||||||| ||||||    
T  38206127 aatcaaacctgagaccttgagaggagcacactccaaggtccc-aagccagcaccaccaggtcaacccaagtgggtt 38206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 521 - 621
Target Start/End: Original strand, 13771555 - 13771656
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtccc 619  Q
    |||||||||| |||||||||| ||||| |||||| ||||| | |||| ||| || | ||||||||  ||||||||||| | ||||| |||||||| ||||    
T  13771555 tttaaagccagagcatagcttcgtatggacttagcccaccgagattgacatcagagggaatcgaatttgagaccttgagatgagcaaacttcaagatccc 13771654  T
Q  620 aa 621  Q
    ||    
T  13771655 aa 13771656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 574 - 646
Target Start/End: Original strand, 37492715 - 37492785
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaa 646  Q
    ||||| |||||||||||||||||| |||| |||||| |||||||||||  | |||||||| ||| ||||||||    
T  37492715 ggagagtcgaacctgagaccttgagaggatcacactccaaggtcccaa--ccaacactaccaggccaacccaa 37492785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 449 - 509
Target Start/End: Original strand, 42508382 - 42508442
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||||||||||  ||||||||||  |||||| ||||| |||||| |||||||    
T  42508382 aaactcggtatctaatctaataaccgactaattcgaggggaccaattcaaccgcccacttg 42508442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 19660532 - 19660678
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| ||||||  |||||| |||| |||||||   |||||   |||||||||| |||| |||| ||||||    
T  19660532 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagca-agctctgtatg 19660630  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||  ||||| ||||| |||| || ||||||| ||||||||||||    
T  19660631 gacttatcccaccgaaatttgcatcagagagaatcaaacctgagacct 19660678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 574 - 621
Target Start/End: Complemental strand, 21344895 - 21344848
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||||    
T  21344895 ggagaattgaacatgagaccttgagaggagcacactccaaggtcccaa 21344848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 25434656 - 25434703
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||| ||||||||||||||| || |||||||| |||||||||||    
T  25434656 ggagaatcaaacctgagaccttgagagaagcacactccaaggtcccaa 25434703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 575 - 653
Target Start/End: Original strand, 37109349 - 37109427
Alignment:
Q  575 gagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||| |||| || || |||||| |||||||| ||||||    
T  37109349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccc-aagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 575 - 621
Target Start/End: Complemental strand, 7093446 - 7093400
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||||||| | ||||||||||||||||||| |||| ||||||    
T  7093446 gagaatcgaacctaaaaccttgaaaggagcacactccaagatcccaa 7093400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 23639822 - 23639760
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||||||||||    
T  23639822 aaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttg 23639760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 23645480 - 23645418
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||||||||||    
T  23645480 aaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttg 23645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 621
Target Start/End: Original strand, 42281240 - 42281278
Alignment:
Q  583 aacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  42281240 aacctgagaccttgagaggagcacactacaaggtcccaa 42281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 521 - 621
Target Start/End: Complemental strand, 25852338 - 25852238
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtccc 619  Q
    |||||||||| |||| |||| |||||| |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||    
T  25852338 tttaaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccc 25852240  T
Q  620 aa 621  Q
    ||    
T  25852239 aa 25852238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 31141347 - 31141388
Alignment:
Q  580 tcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||| ||||||||| ||||||||||| |||||||||||    
T  31141347 tcgaacctcagaccttgagaggagcacactccaaggtcccaa 31141388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 474 - 594
Target Start/End: Original strand, 33696305 - 33696425
Alignment:
Q  474 gactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataa 573  Q
    |||||||| ||| || ||||||  |||| |||||||   ||||| |||||||||||| |||| |||| |||||| |||||| ||||| |||||||||  |    
T  33696305 gactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggcacca 33696403  T
Q  574 g-gagaatcgaacctgagacct 594  Q
    | | |||| |||||||||||||    
T  33696404 gagggaattgaacctgagacct 33696425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 562 - 646
Target Start/End: Complemental strand, 37455660 - 37455576
Alignment:
Q  562 aaattggcataaggagaatcgaacctgagaccttgaaaggagcacacttc-aaggtcccaaagctaacactactaggtcaacccaa 646  Q
    |||||||||  ||| ||||||||||||||||||||| ||||||| ||| | |||||||| |||| ||||| || ||| ||||||||    
T  37455660 aaattggcaccaggggaatcgaacctgagaccttgagaggagcatactccaaaggtccc-aagccaacaccaccaggccaacccaa 37455576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 1e-31; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 447 - 621
Target Start/End: Original strand, 15485290 - 15485464
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    |||||||| ||||| || |||||  |||||||||| |||||||||||||| ||| ||||||||   || || |||||||||||| | ||||| |||||||    
T  15485290 aaaaactctgtatccaacctaagagccgactaatccgaggggtccaatcccaccatccacttgcggggaccccatttaaagccagaacatagttttgtat 15485389  T
Q  547 gaacttagaccacccaaattggcataaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    | |||||  ||||| |||||||  | ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  15485390 ggacttaacccaccgaaattggtgtcaggggaatcgaacctgagaccttgagaggagcacactccaaggtcccaa 15485464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 32059440 - 32059613
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  32059440 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 32059538  T
Q  548 aacttagaccacccaaattggcataagga-gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  32059539 gacttagcccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 32059613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 448 - 570
Target Start/End: Complemental strand, 4603974 - 4603853
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||||||||||| | ||||| | |||||||||| |||  |||| ||||||    
T  4603974 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagc-gagctctgtatg 4603876  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||| | |||||||||    
T  4603875 gacttagcccatcgaaattggca 4603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 8484661 - 8484807
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  8484661 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 8484759  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    ||||||| ||||| |||||||||  || | ||||| ||||||||||||    
T  8484760 aacttagcccaccgaaattggcaccagagggaatcaaacctgagacct 8484807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 27498731 - 27498877
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  27498731 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctatgtatg 27498829  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  27498830 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 27498877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 467 - 609
Target Start/End: Complemental strand, 31206421 - 31206278
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaatt 566  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||   ||| | |||||||||| | ||||||||| |||||| |||||| |||   |||||    
T  31206421 aaggaccgactaatccgaggagtccaatcccaccgtccacttgtgggggtcccatttaaagcaagagcatagctctgtatggacttaggccaatgaaatt 31206322  T
Q  567 ggca-taaggagaatcgaacctgagaccttgaaaggagcacact 609  Q
    ||||  | || ||||  |||||||||||||||  ||||||||||    
T  31206321 ggcaccagggggaataaaacctgagaccttgagcggagcacact 31206278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 12398448 - 12398621
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||| |||| ||| |||||||||| |||| ||  |||||  |||||||| |||   ||||| |||||||||||| |||| |||| ||||||    
T  12398448 aaaactcggtatccaatccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagccagagca-agctctgtatg 12398546  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||| ||||| |||||| ||  |  | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  12398547 aacttaggccaccgaaattgacaccatagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 12398621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 19145412 - 19145584
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| ||| ||||||| |||||| ||||||| |||| |||||||   ||| | |||||||||||| |||| |||| ||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggac-catttaaagccagagcaaagctctgtatg 19145510  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||| | ||||| |||||||||  || | |||||||||| |||||||||| ||||||| ||| |||| ||||||    
T  19145511 gactt-gcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaa 19145584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 573 - 646
Target Start/End: Original strand, 16172980 - 16173052
Alignment:
Q  573 aggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaa 646  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| | |||| |||||||| ||| ||||||||    
T  16172980 aggagaatcgaacctgagaccttgagaggagcacactccaaggtctc-aagccaacactaccaggccaacccaa 16173052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 18207404 - 18207258
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||||| |||||||||| | || |||| ||||||    
T  18207404 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaaca-agctctgtatg 18207306  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||   | | ||||||||||||||||||    
T  18207305 gacttagcccaccgaaattggcaccggagggaatcgaacctgagacct 18207258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 472 - 621
Target Start/End: Original strand, 16247025 - 16247174
Alignment:
Q  472 ccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcat 571  Q
    |||||||||| |||||||||||||| ||||||||||||   ||  | |||||||| |||||||| || | |||||| ||| || ||||| | |||||||     
T  16247025 ccgactaatccgaggggtccaatcccaccgtccacttgtggggagcccatttaaacccaaagcaaagttctgtatggact-agcccaccaagattggcac 16247123  T
Q  572 aaggaga-atcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
      || |  || |||||||||||||||| ||||||||||| |||||||||||    
T  16247124 cgggggggattgaacctgagaccttgataggagcacactgcaaggtcccaa 16247174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 19456211 - 19456355
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  19456211 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttg-cggggccccgtttaaagccagagca-agctctgtatg 19456308  T
Q  548 aacttagaccacccaaattggcataaggagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  ||  | ||||||||||||||||    
T  19456309 gacttagcccaccgaaattggcaccagagggatcgaacctgagacct 19456355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 30486025 - 30485852
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| |  |||||||| |||||| ||||||| |||| |||||||   |||| || |||||||||| |||| |||| ||||||    
T  30486025 aaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagca-agctctgtatg 30485927  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||| ||  || | ||||||||||||||||||   |||||||| ||| |||| ||||||    
T  30485926 gacttagcccaccgaaattgacaccagagtgaatcgaacctgagacctctgaaggagcaaactccaagatcccaa 30485852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 472 - 621
Target Start/End: Complemental strand, 33025653 - 33025504
Alignment:
Q  472 ccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcat 571  Q
    |||||||||| |||| |||| ||||   ||||||||||   |||||| ||||||||||| |||||||||||||||| |||||  ||| | |||| |||||    
T  33025653 ccgactaatccgaggcgtcccatcccgtcgtccacttgtgggggcct-atttaaagccagagcatagctttgtatggacttaatccatcgaaatcggcat 33025555  T
Q  572 -aaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||| ||||| ||  ||||| ||||| ||||||||||| |||| ||||||    
T  33025554 caaggggaatcaaagttgagatcttgagaggagcacactccaagatcccaa 33025504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 31287946 - 31288119
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||   || ||| ||||||||||  |||| | ||||||| |||| |||||||   ||||| | ||||||| ||||||| |||||||||||    
T  31287946 aaaactcggtatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagca-agctttgtatg 31288044  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||  ||||| |||||||||  || | ||||||||| |||||||||   ||||||| ||| |||| ||||||    
T  31288045 gacttaacccaccgaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatcccaa 31288119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 9659311 - 9659429
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | | ||||||| || ||| ||||||| ||||||||||||   ||| | |||||||||||| |||| |||| ||||||    
T  9659311 aaaactcggtatcccatccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagca-agctgtgtatg 9659409  T
Q  548 aacttagaccacccaaattg 567  Q
     |||||| ||||| ||||||    
T  9659410 gacttagcccaccgaaattg 9659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 10837493 - 10837446
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatc 495  Q
    |||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  10837493 aaaactcggtatccgatctaaggaccaactaatctgaggggaccaatc 10837446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 31669022 - 31669069
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||||||||    
T  31669022 ggagaatcgaacctaagaccttgagaggagcagactccaaggtcccaa 31669069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 38684404 - 38684259
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||| ||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||  ||||||   ||||| | |||||||||| |||| |||| ||||||    
T  38684404 aaaaatcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcc-cgtttaaagccagagca-agctctgtatg 38684307  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  38684306 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 38684259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 578 - 644
Target Start/End: Original strand, 14656645 - 14656710
Alignment:
Q  578 aatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaaccc 644  Q
    |||||||||||||||||||| ||||||| ||| ||||||| | |||| ||||| || ||||||||||    
T  14656645 aatcgaacctgagaccttgagaggagcaaactccaaggtctc-aagccaacacaaccaggtcaaccc 14656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 570
Target Start/End: Original strand, 22253168 - 22253266
Alignment:
Q  472 ccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    ||||||||| ||||||| | |||||  | ||||| |||   |||||||||||||| ||| | |||||||||||||| |||||| ||| | |||||||||    
T  22253168 ccgactaatttgaggggacgaatcccgctgtccagttgtgggggcctcatttaaatccagaacatagctttgtatggacttagcccatcgaaattggca 22253266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 464 - 509
Target Start/End: Original strand, 23016719 - 23016764
Alignment:
Q  464 tctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||| ||||||| |||||||||||||  ||||||||||||    
T  23016719 tctaaggacctactaatccgaggggtccaatctcaccgtccacttg 23016764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 32340340 - 32340381
Alignment:
Q  580 tcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||| ||||||||| ||||||||||| |||||||||||    
T  32340340 tcgaacctaagaccttgagaggagcacactccaaggtcccaa 32340381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 525 - 621
Target Start/End: Complemental strand, 36895545 - 36895449
Alignment:
Q  525 aagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||| |||| ||||||||||| |||| ||||||| ||||||| |  || | ||||||||| ||| ||||||| ||||||||||| |||| ||||||    
T  36895545 aagccagagcaaagctttgtatggactt-gaccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatcccaa 36895449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 2e-30; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 450 - 654
Target Start/End: Original strand, 43963866 - 43964065
Alignment:
Q  450 aactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaa 549  Q
    ||||||||||| |  | ||||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||||| |||||||| || ||||||||||    
T  43963866 aactcggtatccagcccaaggaccaactaatctgaggggtccaatcccaccgtccacttgcatggggctcatttaaaaccaaagcaaagttttgtatgaa 43963965  T
Q  550 cttagaccacccaaattggcat-aaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaat 648  Q
    | ||  ||||| ||||    || | || ||||| ||| ||||||||||| ||||||||||| |||||||||||| | |||||||||||  |||||||| |    
T  43963966 c-taacccaccgaaat----atcagggggaatcaaacatgagaccttgagaggagcacactccaaggtcccaaa-ccaacactactagaccaacccaagt 43964059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 456 - 621
Target Start/End: Original strand, 26176206 - 26176370
Alignment:
Q  456 gtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttaga 555  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||||||||||||   ||||| |||||||| |||||||| || | |||||| || |||     
T  26176206 gtatctagcctaaggaccgactaatctgaagggtccaatcccaccgtccacttgcgggggcc-catttaaatccaaagcaaaggtctgtatggac-tagg 26176303  T
Q  556 ccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||| |||||||||  | ||||||||||| |||||||||||| ||||||||||  |||||||||||    
T  26176304 ccaccaaaattggcaccagggagaatcgaatctgagaccttgagaggagcacaccccaaggtcccaa 26176370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 448 - 595
Target Start/End: Complemental strand, 15038156 - 15038009
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||||||||| ||||||| |||| |||||||   ||||  | ||||||||||||||| |||| ||||||    
T  15038156 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagca-agctctgtatg 15038058  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacctt 595  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||    
T  15038057 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctt 15038009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 35943861 - 35943759
Alignment:
Q  468 aggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattg 567  Q
    |||||| ||||||| |||||||||||||| |||||||||||| | ||||   ||||||||||||| ||||||  |||||| |||||| | ||| ||||||    
T  35943861 aggaccaactaatccgaggggtccaatcccaccgtccacttgcaggggctcaatttaaagccaaatcatagcactgtatggacttagcctaccaaaattg 35943762  T
Q  568 gca 570  Q
    |||    
T  35943761 gca 35943759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 6099516 - 6099563
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6099516 ggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaa 6099563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 8192352 - 8192524
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| |||||||   ||| | | ||  |||||| |||| |||| | ||||    
T  8192352 aaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggc-cgttctaagccagagcaaagctctatatg 8192450  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||| | ||||| | |||||||  || | ||||||||||||||||||||| ||||||||||| |||| ||||||    
T  8192451 gactt-gcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaa 8192524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 570
Target Start/End: Complemental strand, 28669070 - 28668949
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||  | ||||||||| |||||| ||||||| |||| |||||||   ||||| | ||||||||||||||| |||| ||||||    
T  28669070 aaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagca-agctctgtatg 28668972  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||||| |||||||||    
T  28668971 gacttagtccaccgaaattggca 28668949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 26482172 - 26482124
Alignment:
Q  573 aggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  26482172 aggagaatcgaacctgagaccttgagaggagcacactcctaggtcccaa 26482124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 30466830 - 30466976
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| || ||| ||||||| || | |||||||   |||||   |||||||||| |||| |||| ||||||    
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagca-agctctgtatg 30466928  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || ||||||||||||||||||||    
T  30466929 gacttagcccaccgaaattggcagcagagagaatcgaacctgagacct 30466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 33827573 - 33827719
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||  ||||| ||||||| |||| ||||||| | ||| | | |||||||||| |||| |||| ||||||    
T  33827573 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagca-agctctgtatg 33827671  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||| | |||||||||  || | ||||||||||||||||||    
T  33827672 gacttagcccaacgaaattggcaccagagggaatcgaacctgagacct 33827719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 44946053 - 44946199
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| || | ||||||    
T  44946053 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agttctgtatg 44946151  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  44946152 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacct 44946199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 594
Target Start/End: Complemental strand, 17324937 - 17324817
Alignment:
Q  473 cgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcata 572  Q
    |||||||| ||||||| | ||||| |||| |||||||   ||||| |||||||||||| |||| |||| |||||| |||||| ||||| |||||||||      
T  17324937 cgactaatttgaggggactaatcccaccgcccacttgtgggggcc-catttaaagccagagca-agctctgtatggacttagcccaccgaaattggcacc 17324840  T
Q  573 ag-gagaatcgaacctgagacct 594  Q
    || | ||||||||||||||||||    
T  17324839 agagggaatcgaacctgagacct 17324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 14487022 - 14486961
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| |||||||    
T  14487022 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttg 14486961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 574 - 654
Target Start/End: Complemental strand, 29503350 - 29503270
Alignment:
Q  574 ggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggttt 654  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||||| | || || |||||| |||||||| |||||||    
T  29503350 ggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaa-ccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 577 - 622
Target Start/End: Original strand, 32526214 - 32526259
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaa 622  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||    
T  32526214 gaatcgaacctgagaccttgagaggagcaaacttcaagatcccaaa 32526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 573 - 621
Target Start/End: Original strand, 3697396 - 3697444
Alignment:
Q  573 aggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||| |||||||||| |||||||| || |||||||||||    
T  3697396 aggagaatcgaaccagagaccttgagaggagcactctccaaggtcccaa 3697444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 447 - 535
Target Start/End: Complemental strand, 31778229 - 31778141
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagca 535  Q
    ||||||||||||||  ||| ||| || |||||||||||| || ||||||  ||||||||||||   ||||| |||||||||||| ||||    
T  31778229 aaaaactcggtatccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagccagagca 31778141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 551 - 653
Target Start/End: Original strand, 42327368 - 42327471
Alignment:
Q  551 ttagaccacccaaattggcata-aggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaat 648  Q
    |||| |||||||||||||||   | |||||||||||||||||||||||  ||||||||||| | ||||||| |||| || || |||||| |||||||| |    
T  42327368 ttagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtccc-aagccaataccactaggccaacccaagt 42327466  T
Q  649 gggtt 653  Q
    |||||    
T  42327467 gggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 522 - 621
Target Start/End: Original strand, 43374399 - 43374498
Alignment:
Q  522 ttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtccca 620  Q
    ||||||||| |||| |||||||||| ||||||| ||||| |||||||||  || | ||||||||||||||||||   |||||||| ||| |||| |||||    
T  43374399 ttaaagccagagca-agctttgtataaacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatccca 43374497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 994 - 1049
Target Start/End: Original strand, 35123980 - 35124035
Alignment:
Q  994 atacctaagagtttcatctttaaccttcttagagaactcattgaagacactgtatc 1049  Q
    |||| ||| ||||||||||||||| || ||||||||||||||||| |||| |||||    
T  35123980 atacttaacagtttcatctttaactttgttagagaactcattgaacacaccgtatc 35124035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 535
Target Start/End: Complemental strand, 41330039 - 41329952
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagca 535  Q
    |||||||||||||   || ||| |||||||||||||||||| ||||||  |||| |||||||   ||||| |||||||||||| ||||    
T  41330039 aaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagca 41329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Original strand, 6006889 - 6006951
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | ||||||  ||||||||||||    
T  6006889 aaaaactcggtatctgattcaaggatcgactaatctgaggagaccaatcacaccgtccacttg 6006951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Original strand, 6714294 - 6714356
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||| |||| ||| | |||||||| ||||||| ||||||  ||||||||||||    
T  6714294 aaaaactcggtatccaatccaagaatcgactaatttgaggggaccaatctcaccgtccacttg 6714356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 448 - 530
Target Start/End: Complemental strand, 7250420 - 7250339
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagcca 530  Q
    ||||||||||||||   | |||||| |||||||| |||||||||||||| || |||||||| |  ||||| ||||||||||||    
T  7250420 aaaactcggtatctggcccaaggacggactaatccgaggggtccaatcccactgtccactttagggggcc-catttaaagcca 7250339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 9946722 - 9946676
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaat 494  Q
    |||||||||||||| |||||||||||||||||| ||| |||| ||||    
T  9946722 aaaactcggtatctgatctaaggaccgactaatttgatgggttcaat 9946676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 11941210 - 11941331
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||| ||||||    
T  11941210 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctctgtatg 11941308  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||  ||||| |||||||||    
T  11941309 gacttaacccaccaaaattggca 11941331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 5e-22; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 467 - 654
Target Start/End: Complemental strand, 34844555 - 34844370
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaatt 566  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||   ||||| |||||||||||| |||| |||| |||||| || ||| ||||| |||||    
T  34844555 aaggaccgactaatccgaggggtccaatcccaccatccacttgcgggggcc-catttaaagccatagcaaagctctgtatgtac-tagtccaccgaaatt 34844458  T
Q  567 ggcataagga--gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggttt 654  Q
    ||| |  |||  ||||||||||||||||||||| ||||||||||| ||||||| | |||| ||||  || ||| |||||||| |||||||    
T  34844457 ggc-tctggagggaatcgaacctgagaccttgagaggagcacactccaaggtctc-aagccaacaacaccagggcaacccaagtgggttt 34844370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 48977585 - 48977412
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| ||||||| | ||||| | |||||||||| |||| |||| ||||||    
T  48977585 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagca-agctctgtatg 48977487  T
Q  548 aacttagaccacccaaattggcataagga-gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||  ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  48977486 gacttaacccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 48977412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 471 - 595
Target Start/End: Complemental strand, 51532963 - 51532839
Alignment:
Q  471 accgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    |||||||||||||||||| ||||||| ||||||||||||   ||| | |||||||||  | |||| |||| |||||| |||||| ||||| |||||||||    
T  51532963 accgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagca-agctctgtatggacttagcccaccgaaattggca 51532865  T
Q  571 taag-gagaatcgaacctgagacctt 595  Q
    | || ||||||||||| |||||||||    
T  51532864 ttagagagaatcgaacatgagacctt 51532839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 476 - 595
Target Start/End: Original strand, 7470244 - 7470362
Alignment:
Q  476 ctaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag- 574  Q
    ||||||||||||| ||||||| || | ||||||| | ||||| | |||||||||| |||| |||| ||||||||||||| ||||| |||||||||| ||     
T  7470244 ctaatctgaggggaccaatcccactgcccacttgca-gggccccgtttaaagccagagca-agctctgtatgaacttagcccaccgaaattggcattaga 7470341  T
Q  575 gagaatcgaacctgagacctt 595  Q
    | |||||||||||||||||||    
T  7470342 gggaatcgaacctgagacctt 7470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 15566500 - 15566645
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||||||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  15566500 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcc-cgtttaaagccagagca-agctctgtatg 15566597  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacct 594  Q
     |||||| ||||| ||||||||| ||  | ||||||||||||||||||    
T  15566598 gacttagcccaccgaaattggcactagagggaatcgaacctgagacct 15566645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 35493108 - 35492962
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||  |||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  35493108 aaaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 35493010  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  35493009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 35492962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 49258262 - 49258408
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagca-agctctgtatg 49258360  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacct 594  Q
     |||||| ||||| ||||||||| ||  | ||||||||||||||||||    
T  49258361 gacttagcccaccgaaattggcactagagggaatcgaacctgagacct 49258408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 10083819 - 10083940
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||||||||||   ||||| | |||||||||| |||| |||| ||||||    
T  10083819 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagca-agctctgtatg 10083917  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||||| |||||||||    
T  10083918 gacttagcccaccgaaattggca 10083940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 10190742 - 10190863
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||||||||||   ||||| | |||||||||| |||| |||| ||||||    
T  10190742 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagca-agctctgtatg 10190840  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||||| |||||||||    
T  10190841 gacttagcccaccgaaattggca 10190863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 447 - 651
Target Start/End: Original strand, 10682815 - 10683017
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    |||||||||||||| |  ||||| |||||||||| ||||||||||||||| || |||||||||  | || | |||||||||| |  ||| ||||||||||    
T  10682815 aaaaactcggtatccagcctaag-accgactaatttgaggggtccaatcccactgtccacttgtgtaggtcccatttaaagctagcgcaaagctttgtat 10682913  T
Q  547 gaacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaaccca 645  Q
    | || ||| || |  ||||||| |  ||||||||| ||||||||||| |||| || |||||||| ||||||| | |||| || || ||||| ||||||||    
T  10682914 ggac-tagcccgctgaaattgggaccaaggagaattgaacctgagactttgagagaagcacactccaaggtctc-aagccaataccactagatcaaccca 10683011  T
Q  646 aatggg 651  Q
    | ||||    
T  10683012 agtggg 10683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 517 - 609
Target Start/End: Complemental strand, 27887557 - 27887464
Alignment:
Q  517 ctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataagga-gaatcgaacctgagaccttgaaaggagcacact 609  Q
    ||||||||||| ||||||||||||  ||||| |||||| ||||| |||||| |||||||| ||||||||||| |||| |||| || ||||||||    
T  27887557 ctcatttaaaggcaaagcatagctgcgtatggacttagcccaccaaaattgacataaggaggaatcgaacctaagacattgagagaagcacact 27887464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 30257821 - 30257648
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||| ||||||||  ||| ||| | ||||||||| |||||| ||||| | |||| |||||||   ||||| |||||||||||| |||| |||| ||||||    
T  30257821 aaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagca-agctctgtatg 30257723  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||| | |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  30257722 gacttagtccatcgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 30257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 575 - 621
Target Start/End: Complemental strand, 31714394 - 31714348
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31714394 gagaatcgaacttgagaccttgagaggagcacacttcaaggtcccaa 31714348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 42799744 - 42799821
Alignment:
Q  573 aggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatggg 651  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||| |||| ||||| || ||| |||||||| ||||    
T  42799744 aggagagtcgaacctgagaccttgagaggagcacactccaaggtccc-aagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 572 - 621
Target Start/End: Original strand, 18316494 - 18316543
Alignment:
Q  572 aaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  18316494 aaggagaatcgaacctaagaccttgagaggagcacactccaaggtcccaa 18316543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 448 - 592
Target Start/End: Original strand, 53233911 - 53234054
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||| ||||| |||| |||| ||||||    
T  53233911 aaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagca-agctctgtatg 53234008  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagac 592  Q
     |||||| ||||| |||||||||  || ||||||||||||||||||    
T  53234009 gacttagcccaccgaaattggcaccagagagaatcgaacctgagac 53234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 547
Target Start/End: Original strand, 10538126 - 10538225
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    |||||||||||||| |  ||||| |||||||||| ||||||||||||||| || |||||||||  | || | |||||||||| | |||| ||||||||||    
T  10538126 aaaaactcggtatccagcctaag-accgactaatttgaggggtccaatcccactgtccacttgcgtaggtcccatttaaagctagagcaaagctttgtat 10538224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 448 - 595
Target Start/End: Original strand, 40133449 - 40133596
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  40133449 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 40133547  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacctt 595  Q
     |||||| ||||| |||||| ||  || | |||||||||||||||||||    
T  40133548 gacttagcccaccgaaattgacaccagagggaatcgaacctgagacctt 40133596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 590
Target Start/End: Original strand, 8097279 - 8097421
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| ||||| ||| ||||||    
T  8097279 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcat-gctctgtatg 8097377  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgag 590  Q
     |||||| ||| | ||||| ||| ||| | ||||||||||||||    
T  8097378 gacttagcccatcgaaattagcacaagagggaatcgaacctgag 8097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 8456150 - 8456296
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||  ||| | ||||||||| |||||| ||||||| || | |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  8456150 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 8456248  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  8456249 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 8456296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 574 - 653
Target Start/End: Original strand, 11092167 - 11092245
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||||||||||  ||||||||||| || |||||||| ||||||||| |||| ||||| |||||| |||||||| ||||||    
T  11092167 ggagaatcgaagttgagaccttgagagtagcacactacaaggtccc-aagccaacaccactaggccaacccaagtgggtt 11092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 26174310 - 26174164
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   |||||  ||||||||||| |||| |||| ||||||    
T  26174310 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagca-agctctgtatg 26174212  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||  ||||| |||||||||  || |  |||||||||||||||||    
T  26174211 gacttaacccaccgaaattggcaccagaggaaatcgaacctgagacct 26174164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 46576545 - 46576399
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||  ||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  46576545 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 46576447  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||  |||||||||  || | ||||||||||||||||||    
T  46576446 gacttagcccactgaaattggcaccagagggaatcgaacctgagacct 46576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 52821636 - 52821781
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||| |  ||||| | |||||||||| |||| |||| ||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt-acggggccccgtttaaagccagagca-agctctgtatg 52821733  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     ||||||  |||| |||||||||  || | ||||||||||||||||||    
T  52821734 gacttagctcaccgaaattggcaccagagggaatcgaacctgagacct 52821781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 574 - 655
Target Start/End: Complemental strand, 40268567 - 40268487
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtttt 655  Q
    |||||||||||||||||||||| | |||||| |||| ||||||||| |||| ||||| || |||  ||||||| ||||||||    
T  40268567 ggagaatcgaacctgagaccttaagaggagcccactccaaggtccc-aagccaacaccaccaggcaaacccaagtgggtttt 40268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 50731237 - 50731298
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||  ||| ||||| |||||||||||||||| ||||||| |||| |||||||    
T  50731237 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50731298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 50781617 - 50781556
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||  ||| ||||| |||||||||||||||| ||||||| |||| |||||||    
T  50781617 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50781556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 448 - 496
Target Start/End: Complemental strand, 7196004 - 7195956
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatcc 496  Q
    |||||||||||||||||| ||| | |||||||||||||||| |||||||    
T  7196004 aaaactcggtatctaatcaaagaatcgactaatctgaggggaccaatcc 7195956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 8958035 - 8958154
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctca-tttaaagccaaagcatagctttgtat 546  Q
    |||||||||||||| ||| ||| | ||| ||||| |||||| ||||||| |||| |||||||   ||||| || |||||||| | |||| ||||||||||    
T  8958035 aaaactcggtatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagca-agctttgtat 8958133  T
Q  547 gaacttagaccacccaaattg 567  Q
    | |||||| ||||| ||||||    
T  8958134 ggacttagcccaccaaaattg 8958154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 577 - 621
Target Start/End: Original strand, 35623267 - 35623311
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  35623267 gaatcgaacatgagaccttgagaggagcacactccaaggtcccaa 35623311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 25289715 - 25289860
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||  ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  25289715 aaaactcggtatccgatccaagaatcgactaattcgaggga-ccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 25289812  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  25289813 gacttagcccaccgaaattggcactagagggaatcgaacctgagacct 25289860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 470 - 509
Target Start/End: Complemental strand, 26599489 - 26599450
Alignment:
Q  470 gaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  26599489 gaccgaccaatctgaggggtccaatcccaccgtccacttg 26599450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 447 - 570
Target Start/End: Complemental strand, 32151622 - 32151500
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||  ||| ||| | ||||||||  |||||| ||||||  |||| |||||||   ||||| | |||||||||| |||| |||| |||||    
T  32151622 aaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtat 32151524  T
Q  547 gaacttagaccacccaaattggca 570  Q
    || ||||| ||||| |||||||||    
T  32151523 gagcttagcccaccgaaattggca 32151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 39041852 - 39041998
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| ||| || ||||||| |||  |||||||   ||||| | |||||||||| |||| |||| || |||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagca-agctctgcatg 39041950  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || ||||||||||| ||||||||    
T  39041951 gacttagcccaccgaaattggcaccagagagaatcgaacttgagacct 39041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 53167681 - 53167724
Alignment:
Q  464 tctaaggaccgactaatctgaggggtccaatccaaccgtccact 507  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||    
T  53167681 tctaaggaccgactaatccgaggggcccaatcccaccgtccact 53167724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 521 - 595
Target Start/End: Original strand, 53288785 - 53288859
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagacctt 595  Q
    ||||||||||||||| ||||||||||| |||||| ||||| |||||||||  || | ||||||| |||||||||||    
T  53288785 tttaaagccaaagca-agctttgtatggacttagtccaccgaaattggcaccagagggaatcgagcctgagacctt 53288859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 53424177 - 53424322
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||  ||||||   ||||| | |||||||||| |||| | || ||||||    
T  53424177 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcc-cgtttaaagccatagca-aactctgtatg 53424274  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  53424275 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacct 53424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 509
Target Start/End: Complemental strand, 3869887 - 3869845
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||||||||||||||||||| || ||| |||||    
T  3869887 aaggaccgactaatctgaggggtccaatcccactgtcaacttg 3869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 544 - 621
Target Start/End: Original strand, 7485620 - 7485698
Alignment:
Q  544 tatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||||||||| ||||| |||||||||| || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  7485620 tatgaacttagcccaccgaaattggcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 7485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 574 - 651
Target Start/End: Complemental strand, 19716276 - 19716199
Alignment:
Q  574 ggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatggg 651  Q
    ||||||||||||| ||||||||||  ||||||||||| || |||||| |||| ||||| || | |||||||||||||||    
T  19716276 ggagaatcgaaccagagaccttgaggaggagcacactccatggtccc-aagccaacaccaccatgtcaacccaaatggg 19716199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 473 - 594
Target Start/End: Complemental strand, 25379933 - 25379812
Alignment:
Q  473 cgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcata 572  Q
    ||||||||| |||||| ||||||| |||| || ||||   ||||| | |||||||||| |||| |||| |||||| |||||| || || |||||||||      
T  25379933 cgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagca-agctctgtatggacttagccctccgaaattggcact 25379835  T
Q  573 aggag-aatcgaacctgagacct 594  Q
    || || |||||||||||||||||    
T  25379834 agaaggaatcgaacctgagacct 25379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 520 - 570
Target Start/End: Original strand, 39604682 - 39604732
Alignment:
Q  520 atttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    ||||||||||||||||||| ||| |||| |||||| ||||| |||||||||    
T  39604682 atttaaagccaaagcatagatttatatggacttagtccaccaaaattggca 39604732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 505
Target Start/End: Original strand, 40302665 - 40302703
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtcca 505  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  40302665 aaggaccgactaatttgaggggtccaatcccaccgtcca 40302703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 575 - 621
Target Start/End: Original strand, 53863866 - 53863912
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  53863866 gagaattgaacctaagaccttgagaggagcacactccaaggtcccaa 53863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 575 - 620
Target Start/End: Complemental strand, 40777090 - 40777045
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtccca 620  Q
    ||||||| ||||||||||||||| ||||||||||| ||| ||||||    
T  40777090 gagaatcaaacctgagaccttgagaggagcacactccaatgtccca 40777045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 54990782 - 54990733
Alignment:
Q  573 aggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||||||||||  |||||||| || |||||||||||    
T  54990782 aggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaa 54990733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 2e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 450 - 622
Target Start/End: Original strand, 17149458 - 17149630
Alignment:
Q  450 aactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaa 549  Q
    |||||||||||| ||  ||||||||||||||  |||||| ||||||| ||||| ||||||   ||||| |||||||||||||||||  ||| |||||| |    
T  17149458 aactcggtatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatgga 17149557  T
Q  550 cttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaa 622  Q
    ||| | | ||| ||||| |||  || | ||||||||||||||||||||| ||||||||||| |||| |||||||    
T  17149558 ctt-gccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaaa 17149630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 9208449 - 9208276
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||| | ||| ||| | |||||| ||||||| | ||||||| |||| |||||||   ||||| |||||||||||||||||  ||| ||||||    
T  9208449 aaaactcggtatttgatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatg 9208350  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||| | ||||| |||||||||  | || ||||||||||||||||||||| ||||||| ||| |||| ||||||    
T  9208349 gactt-gcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaa 9208276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 467 - 621
Target Start/End: Original strand, 6383893 - 6384047
Alignment:
Q  467 aaggaccgactaatctgaggggtccaa-tccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaat 565  Q
    |||||| |||||||||||||||||||| ||| || |||||||||   ||| | ||||||||||||||||| |||| | |||| ||| || ||||  ||||    
T  6383893 aaggactgactaatctgaggggtccaaatcccactgtccacttgtgggggtcccatttaaagccaaagcaaagctctttatggact-agcccactgaaat 6383991  T
Q  566 tggcataaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||   |  | || |||||||||||||||| ||||||||||| |||||||||||    
T  6383992 tggcacccgagggattgaacctgagaccttgagaggagcacactccaaggtcccaa 6384047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 449 - 594
Target Start/End: Complemental strand, 9239171 - 9239026
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatga 548  Q
    ||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| ||||||||||||||||| |||| | ||||     
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagca-agctctatatgg 9239073  T
Q  549 acttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    |||||  ||||| |||||||||  || | ||||||||||||||||||    
T  9239072 acttaacccaccgaaattggcaccagagggaatcgaacctgagacct 9239026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 473 - 594
Target Start/End: Complemental strand, 11449043 - 11448922
Alignment:
Q  473 cgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcata 572  Q
    ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| |||||| |||||| ||||| |||||||||      
T  11449043 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaattggcacc 11448945  T
Q  573 ag-gagaatcgaacctgagacct 594  Q
    || ||||||||||||||||||||    
T  11448944 agagagaatcgaacctgagacct 11448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 15360098 - 15360271
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| ||| |||   ||||| | |||||||||| |||| |||| ||||||    
T  15360098 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatg 15360196  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  15360197 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 15360271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 1345132 - 1344986
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||  ||||| ||||||| ||||||||||||   ||| | | |||||||||| |||| |||||||||||    
T  1345132 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagca-agctttgtatg 1345034  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||  |||||||||  || | ||||||||||||||||||    
T  1345033 gacttagcccactgaaattggcaccagagggaatcgaacctgagacct 1344986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 448 - 592
Target Start/End: Complemental strand, 34147543 - 34147399
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||| ||||||    
T  34147543 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agctctgtatg 34147445  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagac 592  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||    
T  34147444 gacttagcccaccgaaattggcaccagagggaatcgaacctgagac 34147399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 448 - 592
Target Start/End: Complemental strand, 34160159 - 34160015
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||| ||||||    
T  34160159 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agctctgtatg 34160061  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagac 592  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||    
T  34160060 gacttagcccaccgaaattggcaccagagggaatcgaacctgagac 34160015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 594
Target Start/End: Original strand, 654145 - 654292
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||  ||| ||  | ||||||||| |||||| ||||||| |||| |||||||   | ||| | |||||||||| |||| |||| |||||    
T  654145 aaaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtat 654243  T
Q  547 gaacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    | |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  654244 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 447 - 567
Target Start/End: Complemental strand, 28672265 - 28672146
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||| ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||||| || |||| |||||    
T  28672265 aaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaaca-agctctgtat 28672167  T
Q  547 gaacttagaccacccaaattg 567  Q
    | |||||| ||||| ||||||    
T  28672166 ggacttagcccaccaaaattg 28672146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 3222636 - 3222781
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | ||||||| || |||| |||| ||||||    
T  3222636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttg-cggggccccgtttaaagacagagca-agctctgtatg 3222733  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  3222734 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 3222781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 9690638 - 9690756
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| ||| || ||||||| ||||||||||||   ||||| | |||||||||| |||| |||| ||||||    
T  9690638 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagca-agctctgtatg 9690736  T
Q  548 aacttagaccacccaaattg 567  Q
     |||||| ||||| ||||||    
T  9690737 gacttagcccaccgaaattg 9690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 575 - 617
Target Start/End: Original strand, 6691549 - 6691591
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtc 617  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  6691549 gagaatcgaacctgagaccttgagaggagcacactccaaggtc 6691591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 594
Target Start/End: Complemental strand, 12390597 - 12390476
Alignment:
Q  473 cgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcata 572  Q
    ||||||||| |||||| ||||||| |||| |||||||   |||||   |||||||||| |||| |||| |||||| |||||| ||||| |||||||||      
T  12390597 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagca-agctctgtatggacttagcccaccgaaattggcacc 12390499  T
Q  573 ag-gagaatcgaacctgagacct 594  Q
    || | ||||||||||||||||||    
T  12390498 agagggaatcgaacctgagacct 12390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 30056857 - 30056724
Alignment:
Q  17 catcatccaacccaaacacaccaacaaccatggcagcaaaataaactcagccgaagcctacagcacagaccgattgcagcaaaaccagaaaa-caattca 115  Q
    ||||||||||  |||| ||||||||||| | | ||||||| ||||||| |||||||| |||| || |||||| | |||| |||| | ||||| |||||||    
T  30056857 catcatccaagacaaaaacaccaacaactaagacagcaaa-taaactctgccgaagcgtacaacatagaccgttcgcaggaaaaacggaaaaacaattca 30056759  T
Q  116 ttccaac-ctgacagaaataccatcaccttttaac 149  Q
     || ||  |||||||||||||||||| ||||||||    
T  30056758 atctaaatctgacagaaataccatcatcttttaac 30056724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 551 - 621
Target Start/End: Complemental strand, 14558064 - 14557993
Alignment:
Q  551 ttagaccacccaaattggcataaggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaa 621  Q
    ||||||||||||||||| ||   ||||||||||||||||||||  ||  ||||||||||||| |||||||||    
T  14558064 ttagaccacccaaattgacaccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaa 14557993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 577 - 620
Target Start/End: Original strand, 28741970 - 28742013
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtccca 620  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||    
T  28741970 gaatcgaacctgagaccttgagaggagcacactccaagatccca 28742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 1e-19; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 18128714 - 18128541
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||   ||| ||| ||||||||||||||| || ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| | ||||    
T  18128714 aaaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatg 18128615  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     | || | ||||| |||||||||  || |||||||||| || |||||||||||||||||||||||||| ||||||    
T  18128614 ga-ttcgcccaccgaaattggcaccagagagaatcgaatctaagaccttgaaaggagcacacttcaagatcccaa 18128541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 4718846 - 4718673
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  4718846 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 4718748  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||   |||||||| ||| |||| ||||||    
T  4718747 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaa 4718673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 32879480 - 32879334
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||| |||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | ||||| | || |||| |||| ||||||    
T  32879480 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagca-agctctgtatg 32879382  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    ||||||| ||||| |||||||||  || | ||||||||||||||||||    
T  32879381 aacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 32879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 449 - 594
Target Start/End: Complemental strand, 28193674 - 28193529
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatga 548  Q
    ||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| ||||||| | ||||| | |||||||||| |||| |||| ||||||     
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagca-agctctgtatgg 28193576  T
Q  549 acttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    |||||  ||||| |||||||||  || | ||||||||||||||||||    
T  28193575 acttaacccaccgaaattggcaccagagggaatcgaacctgagacct 28193529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 595
Target Start/End: Complemental strand, 2166897 - 2166753
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||| |||| ||  | |||||||||||||||| ||||||| |||| |||||||   ||| || ||||||||||| |||| |||| ||||||    
T  2166897 aaaactcggtatccaatcaaaaaatcgactaatctgaggggaccaatcccaccgcccacttg-cggggtcttatttaaagccagagca-agctctgtatg 2166800  T
Q  548 aacttagaccacccaaattggcataaggagaatcgaacctgagacctt 595  Q
     |||||| | ||  |||||||||  ||| |||||||||||||||||||    
T  2166799 gacttagcctactgaaattggcacgagg-gaatcgaacctgagacctt 2166753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 34237655 - 34237801
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| ||||  ||||||   ||||| | |||||||||| |||| |||| ||||||    
T  34237655 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagca-agctctgtatg 34237753  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  34237754 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 34237801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 3734623 - 3734796
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| || | ||| |||   ||||| | |||||||||| |||| |||| ||||||    
T  3734623 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagca-agctctgtatg 3734721  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  3734722 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 3734796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 517 - 621
Target Start/End: Original strand, 26168918 - 26169021
Alignment:
Q  517 ctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataaggag-aatcgaacctgagaccttgaaaggagcacacttcaagg 615  Q
    |||||||||||||| | || |||| ||||||||||| | ||||| |||||||||| ||||| |||| ||||||||||||||| ||||||| ||| ||||     
T  26168918 ctcatttaaagccagaaca-agctctgtatgaactt-gcccaccgaaattggcatcaggaggaatcaaacctgagaccttgagaggagcaaactccaaga 26169015  T
Q  616 tcccaa 621  Q
    ||||||    
T  26169016 tcccaa 26169021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 40136942 - 40137007
Alignment:
Q  556 ccacccaaattggcataaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    ||||| |||||||||   |||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  40136942 ccaccgaaattggcaccgggagaatcaaacctgagaccttgagaggagcacactccaaggtcccaa 40137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 556 - 654
Target Start/End: Complemental strand, 16852438 - 16852339
Alignment:
Q  556 ccacccaaattggca-taaggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||  ||||||||||| | ||||||| |||| || || |||||| |||||||| ||||||    
T  16852438 ccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtccc-aagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 574 - 653
Target Start/End: Complemental strand, 6530885 - 6530807
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||||||||||||||||| |||| ||||||||||| | ||||||| |||| ||||| || ||| |||||||| ||||||    
T  6530885 ggagaatcgaacctgagacattgagaggagcacactcctaggtccc-aagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 9126482 - 9126549
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagc 534  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| | ||  | ||||||||||||||||    
T  9126482 aaggaccgactaatctgagggatccaatcccaccgtctacttgcagggttcccatttaaagccaaagc 9126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 21603431 - 21603285
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 21603333  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagacct 594  Q
      ||||| ||||| |||||||||  |  | ||||||||||||||||||    
T  21603332 ggcttagcccaccgaaattggcaccatagggaatcgaacctgagacct 21603285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 521 - 607
Target Start/End: Original strand, 24339696 - 24339782
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcaca 607  Q
    ||||||||||||||| |||||||||||||||||  ||||| ||||||| | ||| || |||||||||| ||||||||| || ||||||    
T  24339696 tttaaagccaaagcaaagctttgtatgaactta-tccaccgaaattggtacaagagaaaatcgaacctaagaccttgagagaagcaca 24339782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 39349457 - 39349311
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||| ||||||  ||| ||| | ||||||||| ||||||  |||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  39349457 aaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 39349359  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  39349358 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 39349311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 448 - 570
Target Start/End: Complemental strand, 42328205 - 42328084
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| | ||||||||||   ||||| | |||||||||| |||| |||| ||||||    
T  42328205 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagca-agctctgtatg 42328107  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||||| |||||||||    
T  42328106 gacttagcccaccgaaattggca 42328084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 575 - 651
Target Start/End: Complemental strand, 3624658 - 3624582
Alignment:
Q  575 gagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatggg 651  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||| |||| || || |||||| |||||||| ||||    
T  3624658 gagaatcgaacctgagaccttgaagaggagcacactcccaggtccc-aagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 592
Target Start/End: Original strand, 34610687 - 34610831
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||| | |||| |||||||   ||| ||| |||||||||| |||| |||| |||||     
T  34610687 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagca-agctctgtata 34610785  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagac 592  Q
     |||||||||||| |||||||||| || | ||||||||||| ||||    
T  34610786 gacttagaccaccgaaattggcatcagagggaatcgaacctcagac 34610831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 448 - 591
Target Start/End: Original strand, 8765526 - 8765669
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   | ||| | |||||||||| |||| |||| ||||||    
T  8765526 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtatg 8765624  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgaga 591  Q
     |||||| ||| | |||||||||  || | |||||||||||||||    
T  8765625 gacttagcccatcgaaattggcaccagagggaatcgaacctgaga 8765669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 556 - 654
Target Start/End: Complemental strand, 18897264 - 18897165
Alignment:
Q  556 ccacccaaattggcataagga-gaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||| |||||||||  |||| ||||||||| |||||||||||  |||||||||||  ||||||||||| | ||||| |||||| |||||||| ||||||    
T  18897264 ccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaa-ccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 448 - 595
Target Start/End: Complemental strand, 20306109 - 20305962
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||| ||||||||  |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||| ||||||    
T  20306109 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctctgtatg 20306011  T
Q  548 aacttagaccacccaaattggcataagga-gaatcgaacctgagacctt 595  Q
     |||||| ||| | |||||||||  || | |||||||| ||||||||||    
T  20306010 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctt 20305962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 448 - 595
Target Start/End: Complemental strand, 21092742 - 21092595
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||| ||||||||  |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||| ||||||    
T  21092742 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctctgtatg 21092644  T
Q  548 aacttagaccacccaaattggcataagga-gaatcgaacctgagacctt 595  Q
     |||||| ||| | |||||||||  || | |||||||| ||||||||||    
T  21092643 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctt 21092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 11979350 - 11979283
Alignment:
Q  556 ccacccaaattggcataagg-agaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaa 621  Q
    ||||| |||||||||| ||| |||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  11979350 ccacctaaattggcatcaggcagaaccgaacctaagaccttgagaagaagcacacttcaaggtcccaa 11979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 575 - 618
Target Start/End: Original strand, 29855417 - 29855460
Alignment:
Q  575 gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcc 618  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||    
T  29855417 gagaatcgaacctgagaccttaagaggagcacactacaaggtcc 29855460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 507
Target Start/End: Original strand, 34694575 - 34694634
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccact 507  Q
    |||||||| ||||  ||| |||||| ||||||||||||||| ||||||| ||||||||||    
T  34694575 aaaactcgttatccgatccaaggacagactaatctgaggggaccaatcccaccgtccact 34694634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 521 - 622
Target Start/End: Original strand, 27746408 - 27746509
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcat-aaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtccc 619  Q
    |||||||||| |||| |||| |||||| |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||    
T  27746408 tttaaagccagagca-agctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatccc 27746506  T
Q  620 aaa 622  Q
    |||    
T  27746507 aaa 27746509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 574 - 654
Target Start/End: Original strand, 19703484 - 19703564
Alignment:
Q  574 ggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggttt 654  Q
    ||||||||||||||||||||||||  |||||||||||   ||||||| |||| || || |||||| |||||||| |||||||    
T  19703484 ggagaatcgaacctgagaccttgaggaggagcacactctcaggtccc-aagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 22779727 - 22779686
Alignment:
Q  580 tcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||| ||||||||| | |||||||||||    
T  22779727 tcgaacctgagaccttgagaggagcacattccaaggtcccaa 22779686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 653
Target Start/End: Original strand, 33727873 - 33727949
Alignment:
Q  577 gaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||||||||||||||||||||  ||||||||||||| | ||| |||| || | || |||||| |||||||||||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacct-ataccactagggcaacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 5e-19; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 467 - 655
Target Start/End: Complemental strand, 37047170 - 37046983
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaatt 566  Q
    |||| ||||||||||  ||||||||||||| ||||||||||||   ||||| |||||||||| | |||| |||| |||||| ||| || ||||| |||||    
T  37047170 aagggccgactaatcctaggggtccaatcccaccgtccacttgtgggggccccatttaaagctagagcaaagctctgtatggact-agcccaccaaaatt 37047072  T
Q  567 ggcataaggag-aatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtttt 655  Q
     | |  ||| | |||| ||||||||||||||| ||||||||||| ||||||||| |||| ||||| || ||  |||||||| ||||||||    
T  37047071 tgtaccagggggaatcaaacctgagaccttgagaggagcacactccaaggtccc-aagccaacaccaccagaccaacccaagtgggtttt 37046983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 471 - 595
Target Start/End: Complemental strand, 30677350 - 30677226
Alignment:
Q  471 accgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    |||||||||||||||||| ||||||| |||| |||||||   ||| | ||||||||||||||||| |||| |||||| |||||| ||||| |||||||||    
T  30677350 accgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagca-agctctgtatggacttagcccaccgaaattggca 30677252  T
Q  571 taag-gagaatcgaacctgagacctt 595  Q
      || | ||||| |||||||||||||    
T  30677251 ccagagggaatcaaacctgagacctt 30677226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 4621237 - 4621383
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   || || | |||||||||| |||| |||| ||||||    
T  4621237 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagca-agctctgtatg 4621335  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  4621336 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 4621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 24122220 - 24122074
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   | ||| | |||||||||| |||| |||| ||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtatg 24122122  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  24122121 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 24122074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 532 - 653
Target Start/End: Complemental strand, 39964626 - 39964505
Alignment:
Q  532 agcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacac 630  Q
    ||||||||| ||| |||||| || ||||| |||||||||  || | ||||| ||||||||||||||| ||||||||||| ||||||| | |||| |||||    
T  39964626 agcatagctctgtgtgaactcagcccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaaggtcgc-aagccaacac 39964528  T
Q  631 tactaggtcaacccaaatgggtt 653  Q
      ||||| |||||||||| ||||    
T  39964527 ctctaggccaacccaaattggtt 39964505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 471 - 617
Target Start/End: Complemental strand, 2755741 - 2755594
Alignment:
Q  471 accgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    ||||||||||  |||| ||||||||| |||||||||||    |||   |||||||||||| | ||||||||||||||||||||  |||||  |||||| |    
T  2755741 accgactaattcgaggagtccaatcccaccgtccacttatgagggggccatttaaagccataacatagctttgtatgaacttaacccaccacaattggta 2755642  T
Q  571 taag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtc 617  Q
      || || |||| ||||| ||||||||| | ||||| |||||||||||    
T  2755641 acagagataatcaaacctaagaccttgagatgagcatacttcaaggtc 2755594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 15059402 - 15059548
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||  |||| |||||||   || || | |||||||||| |||| |||| ||||||    
T  15059402 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagca-agctctgtatg 15059500  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || ||||||||||||||||||||    
T  15059501 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacct 15059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 574 - 653
Target Start/End: Original strand, 15581139 - 15581217
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||||| |||||||||||||| | ||||||||||| ||||||||| |||| ||||| || ||| |||||||| ||||||    
T  15581139 ggagaattgaacctgagacctttagaggagcacactccaaggtccc-aagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 24674590 - 24674444
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||| ||||||||  ||| ||| | ||||||||  |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  24674590 aaaattcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 24674492  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  24674491 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 24674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 1486618 - 1486556
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||||  ||| ||||||||||||||| |||||| || |||| ||||||||||||    
T  1486618 aaaaactcggtatccgatccaaggaccgactaatcggaggggaccgatcccaccgtccacttg 1486556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 521 - 621
Target Start/End: Original strand, 9500428 - 9500528
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtccc 619  Q
    |||||||||| |||| |||| |||||| |||||| ||||| |||||||||  || ||||||||||||||||||||   |||||||| ||| |||| ||||    
T  9500428 tttaaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctgaaggagcaaactccaagatccc 9500526  T
Q  620 aa 621  Q
    ||    
T  9500527 aa 9500528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 447 - 567
Target Start/End: Complemental strand, 1379095 - 1378977
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    |||| |||||||||  ||||||| | |||||||||||||||| ||||||  ||||||||||||   ||||| | |||||||||| |||| || | |||||    
T  1379095 aaaagctcggtatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcc-cgtttaaagccagagca-agttctgtat 1378998  T
Q  547 gaacttagaccacccaaattg 567  Q
    | |||||| ||||| ||||||    
T  1378997 ggacttagcccaccgaaattg 1378977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 574 - 621
Target Start/End: Complemental strand, 4825050 - 4825002
Alignment:
Q  574 ggagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaa 621  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  4825050 ggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaa 4825002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 574 - 622
Target Start/End: Original strand, 6127984 - 6128032
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaa 622  Q
    |||||||||||| ||||||||||| |||||||| || ||||||||||||    
T  6127984 ggagaatcgaacttgagaccttgagaggagcacgctccaaggtcccaaa 6128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 483 - 594
Target Start/End: Complemental strand, 8077809 - 8077698
Alignment:
Q  483 gaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataag-gagaatc 581  Q
    |||||| ||||||| |||| |||||||   |||||   |||||||||| |||| |||| |||||| |||||| ||||| |||||||||  || |||||||    
T  8077809 gaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagagaatc 8077711  T
Q  582 gaacctgagacct 594  Q
    |||||||||||||    
T  8077710 gaacctgagacct 8077698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 20999185 - 20999245
Alignment:
Q  470 gaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagcca 530  Q
    |||||||||||| |||||||||||| | |||||||||||||  | |||| |||||||||||    
T  20999185 gaccgactaatccgaggggtccaataccaccgtccacttgagggagccttatttaaagcca 20999245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 31605845 - 31605893
Alignment:
Q  574 ggagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaa 621  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  31605845 ggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaa 31605893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 449 - 509
Target Start/End: Original strand, 37351454 - 37351514
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| |||||||    
T  37351454 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttg 37351514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 578 - 621
Target Start/End: Complemental strand, 24217045 - 24217002
Alignment:
Q  578 aatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||    
T  24217045 aatcgaacctgagaccttgagaggagcacactccaagatcccaa 24217002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 574 - 621
Target Start/End: Complemental strand, 38939280 - 38939233
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||| |||| |||||||||| ||||||||||| |||||||||||    
T  38939280 ggagaatcaaaccagagaccttgagaggagcacactccaaggtcccaa 38939233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 654
Target Start/End: Original strand, 39714650 - 39714855
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    ||||||||||||| |  | ||||||||||||||| |||| ||||||||| ||| ||||||||   ||| | |||||||| ||| |||| ||||     ||    
T  39714650 aaaactcggtatccagcccaaggaccgactaatccgaggagtccaatcccaccatccacttgtggggggcccatttaaatccagagcaaagctccccttg 39714749  T
Q  548 aacttagaccacccaaattggca-taaggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaa 646  Q
     || ||| ||||| |||| ||||   ||||||||| ||| ||||||||||| ||||||||||| |||| |||| |||| ||| | |||| | ||||||||    
T  39714750 gac-tagcccaccgaaatcggcaccgaggagaatcaaacttgagaccttgagaggagcacactccaagatccc-aagccaacgccactatgccaacccaa 39714847  T
Q  647 atgggttt 654  Q
     |||||||    
T  39714848 gtgggttt 39714855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 473 - 594
Target Start/End: Original strand, 7766752 - 7766873
Alignment:
Q  473 cgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcata 572  Q
    ||||||||| |||||| ||||||| |||| |||||||   ||||| | ||||||| || |||| |||| |||||| |||||| ||||| ||||| |||      
T  7766752 cgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagca-agctctgtatggacttagcccaccgaaattagcacc 7766850  T
Q  573 ag-gagaatcgaacctgagacct 594  Q
    || | ||||||||||||||||||    
T  7766851 agagggaatcgaacctgagacct 7766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 449 - 594
Target Start/End: Complemental strand, 17935965 - 17935820
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatga 548  Q
    ||||||||||||  ||| ||| | ||||||||| ||| || ||||||| | || |||||||   ||||| | |||||||||| |||| | || ||||||     
T  17935965 aaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagca-aactctgtatgg 17935867  T
Q  549 acttagaccacccaaattggcataagga-gaatcgaacctgagacct 594  Q
    |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  17935866 acttagcccaccgaaattggcactagaaggaatcgaacctgagacct 17935820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 572 - 621
Target Start/End: Complemental strand, 21273521 - 21273471
Alignment:
Q  572 aaggagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaa 621  Q
    ||||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  21273521 aaggagaatcgaatccgagaccttgaagaggaccacacttcaaggtcccaa 21273471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 449 - 535
Target Start/End: Complemental strand, 34778535 - 34778449
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagca 535  Q
    ||||||||||||  ||| ||| | |||||||||  ||||| ||||||| ||||||||||||   ||||| | |||||||||||||||    
T  34778535 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagca 34778449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 577 - 655
Target Start/End: Complemental strand, 39012366 - 39012289
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtttt 655  Q
    ||||| ||||| ||||||||| | ||||||||| ||||||||| |||| ||||| |||||| ||||| || ||||||||    
T  39012366 gaatcaaacctaagaccttgagaagagcacactccaaggtccc-aagccaacaccactaggccaaccaaagtgggtttt 39012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 551 - 609
Target Start/End: Original strand, 52029909 - 52029970
Alignment:
Q  551 ttagaccacccaaattggcataagg--agaatcgaacctgagaccttga-aaggagcacact 609  Q
    |||| ||||||||||||||||  ||  |||||||||||||||||||||| ||||||||||||    
T  52029909 ttagcccacccaaattggcatcgggggagaatcgaacctgagaccttgagaaggagcacact 52029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 52135324 - 52135262
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||| |||||  ||| ||| |||||||||| ||||||| ||||||| ||||||||||||    
T  52135324 aaaaactcagtatccgatccaagaaccgactaatatgaggggaccaatcccaccgtccacttg 52135262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 622
Target Start/End: Original strand, 13857843 - 13857888
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaa 622  Q
    |||| |||||||||||||||| |||||||| || ||||||||||||    
T  13857843 gaattgaacctgagaccttgataggagcactctccaaggtcccaaa 13857888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 591
Target Start/End: Complemental strand, 16899681 - 16899557
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaatt 566  Q
    ||||||||||||||| |||||| ||||||  |||||||||||| | ||||| | ||  || ||| |||| ||||||||||| || | | ||||| |||||    
T  16899681 aaggaccgactaatccgaggggaccaatctcaccgtccacttgcaggggccccgttctaaaccagagcaaagctttgtatggac-tggcccaccgaaatt 16899583  T
Q  567 ggcataag-gagaatcgaacctgaga 591  Q
    ||||  || | |||||||||||||||    
T  16899582 ggcaccagagggaatcgaacctgaga 16899557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 576 - 617
Target Start/End: Complemental strand, 18928408 - 18928367
Alignment:
Q  576 agaatcgaacctgagaccttgaaaggagcacacttcaaggtc 617  Q
    ||||| |||||||||||||||| |||||||||||| ||||||    
T  18928408 agaattgaacctgagaccttgagaggagcacactttaaggtc 18928367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 27159282 - 27159221
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||| ||||  ||| || || |||||||||||||||| ||||||| ||||||||||||    
T  27159282 aaaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttg 27159221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 453 - 570
Target Start/End: Complemental strand, 32930941 - 32930825
Alignment:
Q  453 tcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaactt 552  Q
    |||||||| |||||||| | ||| ||||||||||||  |||||| ||| |||||||| | || || | |||||||||| |||| |||| || ||| ||||    
T  32930941 tcggtatccaatctaagaatcgattaatctgaggggatcaatcccaccatccacttgcagggaccccgtttaaagccagagca-agctctgcatggactt 32930843  T
Q  553 agaccacccaaattggca 570  Q
    || ||||| |||| ||||    
T  32930842 agcccaccaaaatgggca 32930825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 47360517 - 47360558
Alignment:
Q  580 tcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||||||||| ||||| ||||||||||| |||||||||||    
T  47360517 tcgaacctgagatcttgagaggagcacactccaaggtcccaa 47360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 8e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 162006 - 161860
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||| ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| |||| ||||||| |||| |||| ||||||    
T  162006 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagca-agctctgtatg 161908  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  161907 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 5e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 448 - 595
Target Start/End: Original strand, 654705 - 654851
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| ||||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  654705 aaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcc-cgtttaaagccagagca-agctctgtatg 654802  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacctt 595  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||    
T  654803 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctt 654851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 22120089 - 22119943
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  22120089 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 22119991  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  22119990 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 22119943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 40542910 - 40543056
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  40542910 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 40543008  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  40543009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 40543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 2751472 - 2751299
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| ||| |||   ||||| | |||||||||| |||| |||| ||||||    
T  2751472 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatg 2751374  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  2751373 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 2751299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 594
Target Start/End: Complemental strand, 7275479 - 7275332
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   |||||   |||||||||| |||| |||| |||||    
T  7275479 aaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagca-agctctgtat 7275381  T
Q  547 gaacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    | |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  7275380 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 7275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 27009561 - 27009414
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccac-ttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||| |||| ||| | |||||||| ||||||| ||||||| ||||||||| ||| | ||||| | ||||||| || |||| |||| |||||    
T  27009561 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagca-agctctgtat 27009463  T
Q  547 gaacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    | |||||| ||||| |||||||||  || | | ||||||||||||||||    
T  27009462 ggacttagcccaccgaaattggcaccagaggggatcgaacctgagacct 27009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 18044308 - 18044162
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | |||||||||||||||| ||||| | |||  |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagca-agctctgtatg 18044210  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| ||||||||| ||| | |||||||||||| |||||    
T  18044209 gacttagcccaccgaaattggcacaagagggaatcgaacctgggacct 18044162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 574 - 653
Target Start/End: Original strand, 25956290 - 25956368
Alignment:
Q  574 ggagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||||| |||||| ||||||||| ||||||||||| ||||||||| |||| || || |||||| |||||||||||||||    
T  25956290 ggagaattgaacctaagaccttgagaggagcacactccaaggtccc-aagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 448 - 597
Target Start/End: Original strand, 11909954 - 11910103
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||| ||||||||  ||||| ||||||||  ||| || ||||||| |||||||||||| | ||||||| |||||||| | | || ||||| |||||    
T  11909954 aaaactcgatatctaattcaaggatcgactaattcgagaggaccaatcccaccgtccacttgtaggggcctcgtttaaagctagaacaaagcttcgtatg 11910053  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttga 597  Q
     |||| ||||||| |||||| ||  || || ||| ||||||||||||||||    
T  11910054 gactt-gaccaccaaaattgacaccagagaaaattgaacctgagaccttga 11910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 12211535 - 12211596
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||||||  ||||||||||||||| |||||| ||||||| |||| |||||||    
T  12211535 aaaactcggtatctaattcaaggaccgactaatcagaggggcccaatcctaccgcccacttg 12211596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 561 - 655
Target Start/End: Complemental strand, 43215277 - 43215182
Alignment:
Q  561 caaattggcataag-gagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtttt 655  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||| | ||||||| |||| || || |||||  |||||||| ||||||||    
T  43215277 caaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtccc-aagccaataccactagaccaacccaagtgggtttt 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 513 - 597
Target Start/End: Complemental strand, 1469248 - 1469164
Alignment:
Q  513 gggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcat--aaggagaatcgaacctgagaccttga 597  Q
    ||||||||||||||||||||| | ||||||||||| |||| | ||| | ||||||||||  ||||| ||||||||||||||||||||    
T  1469248 gggcctcatttaaagccaaagtaaagctttgtatggactt-gcccatcgaaattggcattaaagga-aatcgaacctgagaccttga 1469164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 22703687 - 22703541
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||| ||||||  ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||| | | |||||||||| |||| |||||||||||    
T  22703687 aaaactgggtatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctttgtatg 22703589  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||| ||  || | ||||||||||||||||||    
T  22703588 gacttagcccaccgaaattgacaccagagggaatcgaacctgagacct 22703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 29861871 - 29861725
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||||||| | ||||||||  ||||||  |||||| |||| |||||||   ||||| | |||||||||| |||| || | ||||||    
T  29861871 aaaactcggtatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agttctgtatg 29861773  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  29861772 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 29861725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 575 - 653
Target Start/End: Original strand, 33869443 - 33869521
Alignment:
Q  575 gagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| | |||| || ||||||||| |||||||| ||||||    
T  33869443 gagaatcgaaccagagaccttgagaaggagcacacttccaggtctc-aagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 448 - 570
Target Start/End: Complemental strand, 2344500 - 2344379
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| ||||  ||||||   ||| | | ||||||||||||  | |||| ||||||    
T  2344500 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaa-aaaagctctgtatg 2344402  T
Q  548 aacttagaccacccaaattggca 570  Q
     |||||| ||||| |||||||||    
T  2344401 gacttagcccaccaaaattggca 2344379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 448 - 621
Target Start/End: Complemental strand, 11998050 - 11997877
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| |||| |||||||   |||||   |||||||||| |||| |||| ||||||    
T  11998050 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagca-agctatgtatg 11997952  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| | ||| |||||||||  || | ||||||||||||||||||  | ||||||| ||| |||| ||||||    
T  11997951 gacttagccaaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaa 11997877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 674451 - 674496
Alignment:
Q  463 atctaaggaccgactaatctgaggggtccaatccaaccgtccactt 508  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  674451 atctaaggaccgactaatctgaggggatcaatcccaccgtccactt 674496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 36772376 - 36772448
Alignment:
Q  521 tttaaagccaaagcatagctttgtatgaacttagaccacccaaattggcataaggagaatcgaacctgagacct 594  Q
    |||||||||| |||| |||| ||||||||||||| ||||| ||||||||||| ||  |||| ||||||||||||    
T  36772376 tttaaagccagagca-agctctgtatgaacttagcccaccgaaattggcataggggaaatcaaacctgagacct 36772448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 38372980 - 38373041
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    ||||||| |||||| | | |||||||||||||||  ||||||||||||| ||||||||||||    
T  38372980 aaaactcagtatctgacccaaggaccgactaatccaaggggtccaatcccaccgtccacttg 38373041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 574 - 653
Target Start/End: Original strand, 5579231 - 5579310
Alignment:
Q  574 ggagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    ||||| || |||||||||||||||  ||||||||||| ||||||||| |||| ||||| || |||||||||||| ||||||    
T  5579231 ggagagtcaaacctgagaccttgaggaggagcacactccaaggtccc-aagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 23012534 - 23012629
Alignment:
Q  474 gactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggca 570  Q
    |||||||  |||||| ||||||| |||| |||||||   ||||| |||||||||||| |||| |||| |||||| |||||| ||||| |||||||||    
T  23012534 gactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggca 23012629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 551 - 618
Target Start/End: Original strand, 25132352 - 25132420
Alignment:
Q  551 ttagaccacccaaattggcataaggagaatcgaacctgagaccttga-aaggagcacacttcaaggtcc 618  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||| | |||||||||||| | ||||||    
T  25132352 ttagcccacccaaattagcattgggagaatcgaacctgagaccttaagaaggagcacactcctaggtcc 25132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 10091388 - 10091243
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| ||||||  |||||| |||| |||||||   || || |||||||||||| |||| |||| ||||||    
T  10091388 aaaactcggtatcggatc-aagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagca-agctctgtatg 10091291  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| ||||||||   || | ||||||||||||||||||    
T  10091290 gacttagcccaccgaaattggctccagagggaatcgaacctgagacct 10091243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 17196950 - 17197096
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 17197048  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     ||||||  |||| |||||||||  || | ||||||||| ||||||||    
T  17197049 gacttagctcaccgaaattggcaccagagggaatcgaacttgagacct 17197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 21217833 - 21217979
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | | ||||||| ||||||  |||||| |||| |||||||   ||| | | |||||||| | |||| |||| ||||||    
T  21217833 aaaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagca-agctctgtatg 21217931  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||| || | ||||||||||||||||||    
T  21217932 gacttagcccaccgaaattggcatcagagggaatcgaacctgagacct 21217979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 575 - 653
Target Start/End: Original strand, 26459408 - 26459486
Alignment:
Q  575 gagaatcgaacctgagaccttga-aaggagcacacttcaaggtcccaaagctaacactactaggtcaacccaaatgggtt 653  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||| |||| || || |||||| |||||||| ||||||    
T  26459408 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccc-aagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 41907514 - 41907659
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||||| |||| ||||||| |||  |||||||   ||||| | |||||||||| |||| | || ||||||    
T  41907514 aaaactcggtatccgatccaagaatcgactaatctg-ggggaccaatcccaccacccacttgcgggggccacgtttaaagccagagca-acctctgtatg 41907611  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||  |||||||||  || ||||||||||||||||||||    
T  41907612 gacttagcccactgaaattggcaccagagagaatcgaacctgagacct 41907659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 535
Target Start/End: Original strand, 42913513 - 42913600
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagca 535  Q
    |||||||||||||  ||||||| | | ||||||| |||||| ||||||| ||||||||||||   ||||| | |||||||||| ||||    
T  42913513 aaaactcggtatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagca 42913600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 449 - 621
Target Start/End: Complemental strand, 19421431 - 19421259
Alignment:
Q  449 aaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatga 548  Q
    ||||||||||||| ||  ||| | ||||||||| |||| | ||||||| |||| |||||||   | ||| ||||||||| || |||| |||| ||||||     
T  19421431 aaactcggtatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagca-agctctgtatgg 19421333  T
Q  549 acttagaccacccaaattggcataaggag-aatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
    |||||| ||| | |||||| ||  || || |||||||||||||||||  | ||||||| ||| |||| ||||||    
T  19421332 acttagcccatcgaaattgacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaa 19421259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 622
Target Start/End: Complemental strand, 22696392 - 22696347
Alignment:
Q  577 gaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaaa 622  Q
    ||||| ||||||||||||||| ||||||||||| |||| |||||||    
T  22696392 gaatcaaacctgagaccttgagaggagcacactccaagatcccaaa 22696347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 540
Target Start/End: Original strand, 23636584 - 23636657
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagct 540  Q
    ||||||||||||||| |||  ||||||||| |||||| |||||   ||||| |||||||||||| |||| ||||    
T  23636584 aaggaccgactaatccgagaagtccaatcccaccgtctacttgtgagggccccatttaaagccagagcaaagct 23636657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 27312353 - 27312292
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||||||||||||  ||| ||| | |||||||||||||||| ||||||| |||| |||||||    
T  27312353 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttg 27312292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 448 - 621
Target Start/End: Original strand, 5082 - 5255
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||| ||| |||   ||||| | |||||||||| |||| |||| ||||||    
T  5082 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatg 5180  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaaggtcccaa 621  Q
     |||||| ||||| |||||||||  || | |||||||||||||||||||   ||||||| ||| |||| ||||||    
T  5181 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 5255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 594
Target Start/End: Original strand, 1056 - 1202
Alignment:
Q  447 aaaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtat 546  Q
    ||||||||||||||  ||| ||| | ||||||||  |||||| ||||||| ||||||||||||   ||||| |||||||||||| |||| |||| |||||    
T  1056 aaaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtat 1153  T
Q  547 gaacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
    | |||||| ||||| ||||||||   || | ||||||||||||||||||    
T  1154 ggacttagcccaccgaaattggctccagagggaatcgaacctgagacct 1202  T

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Target: scaffold0366 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 9300 - 9445
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||  |||||| ||||||| ||||||||||||   ||||| |||||||||||| |||| |||| ||||||    
T  9300 aaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtatg 9397  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| ||||||||   || | ||||||||||||||||||    
T  9398 gacttagcccaccgaaattggctccagagggaatcgaacctgagacct 9445  T

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Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 474 - 569
Target Start/End: Original strand, 12027 - 12120
Alignment:
Q  474 gactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggc 569  Q
    |||||||  |||||| ||||||| ||||||||||||   ||||| |||||||||||| |||| |||| |||||| |||||| ||||| ||||||||    
T  12027 gactaattcgaggggaccaatcccaccgtccacttg-tggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggc 12120  T

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Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 448 - 614
Target Start/End: Original strand, 29143 - 29308
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| |||||| ||||||||||||||| ||||||| || ||||| |||   ||| | ||||| |||||| |||| |||| ||||||    
T  29143 aaaactcggtatccgatccaaggactgactaatctgaggggaccaatcccactgtccatttgcgggggtc-cattttaagccagagcaaagctctgtatg 29241  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagaccttgaaaggagcacacttcaag 614  Q
     |||||  | ||| ||| |||||| || | ||||||||||| ||||||||| |||| |||||||||||    
T  29242 gactta-ccgaccgaaaatggcatcagcgggaatcgaacctaagaccttgagaggaacacacttcaag 29308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 467 - 589
Target Start/End: Original strand, 72545 - 72670
Alignment:
Q  467 aaggaccgactaatctgaggggtccaatccaaccgtccacttgaatg--ggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaa 564  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||   |  ||||  ||||||| ||| |||||| || |||||| |||||| ||||| |||    
T  72545 aaggaccgactcatctgaggggtccaatcccaccgttcacttgtggggaggccctatttaaaaccagagcataactctgtatggacttagcccaccaaaa 72644  T
Q  565 ttggcat-aaggagaatcgaacctga 589  Q
    ||| ||| |||| |||||||||||||    
T  72645 ttgacataaaggggaatcgaacctga 72670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 6028 - 5967
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttg 509  Q
    |||| ||| ||||||||| |||||||||||||||||||| | ||||||| ||||||||||||    
T  6028 aaaattcgatatctaatccaaggaccgactaatctgaggtgaccaatcccaccgtccacttg 5967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 40521 - 40376
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||  ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  40521 aaaactcggtatccgatccaagaatcgactaatccgaggga-ccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 40424  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     |||||| ||||| |||||||||  || | ||||||||||||||||||    
T  40423 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 40376  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 535
Target Start/End: Complemental strand, 66951 - 66864
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagca 535  Q
    |||||||||||||  ||| ||||||||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| ||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca 66864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 569
Target Start/End: Complemental strand, 32484 - 32365
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||| ||| | ||||||||| |||||| ||||||| |||  |||||||   ||||| |||||||||||| |||| |||| ||||||    
T  32484 aaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagca-agctctgtatg 32387  T
Q  548 aacttagaccacccaaattggc 569  Q
     |||||| ||||| ||||||||    
T  32386 gacttagcccaccgaaattggc 32365  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 573 - 617
Target Start/End: Original strand, 17720 - 17764
Alignment:
Q  573 aggagaatcgaacctgagaccttgaaaggagcacacttcaaggtc 617  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  17720 aggagaatcgaacctgagaccttgagaggagaacactccaaggtc 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 474 - 569
Target Start/End: Original strand, 10720 - 10813
Alignment:
Q  474 gactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatgaacttagaccacccaaattggc 569  Q
    |||||||  |||||| ||||||| ||||||||||||   ||||| |||||||||||| |||| |||| |||||| |||||| ||||| ||||||||    
T  10720 gactaattcgaggggaccaatcccaccgtccacttg-tggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggc 10813  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 557 - 622
Target Start/End: Original strand, 2888 - 2955
Alignment:
Q  557 cacccaaattggcataa-ggagaatcgaacctgagaccttgaa-aggagcacacttcaaggtcccaaa 622  Q
    ||||||||||||||||  |||||||||||| ||||||||| |  |||| |||||||||||||||||||    
T  2888 cacccaaattggcatagtggagaatcgaacttgagaccttaaggaggatcacacttcaaggtcccaaa 2955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 39289 - 39143
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||| ||| ||| | ||||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| | || || | ||||||    
T  39289 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaaca-agttctgtatg 39191  T
Q  548 aacttagaccacccaaattggcataag-gagaatcgaacctgagacct 594  Q
     || ||| ||||| |||||||||  || | ||||||||| ||||||||    
T  39190 gacatagcccaccgaaattggcaccagagggaatcgaacttgagacct 39143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 448 - 554
Target Start/End: Original strand, 2426 - 2531
Alignment:
Q  448 aaaactcggtatctaatctaaggaccgactaatctgaggggtccaatccaaccgtccacttgaatgggcctcatttaaagccaaagcatagctttgtatg 547  Q
    |||||||||||||  ||  |||||| |||||||| |||||| ||||||| |||| |||||||   ||||| | |||||||||| |||| |||| ||||||    
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatg 2524  T
Q  548 aacttag 554  Q
     ||||||    
T  2525 gacttag 2531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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