View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9241_low_1 (Length: 1239)
Name: NF9241_low_1
Description: NF9241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9241_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 740; Significance: 0; HSPs: 40)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 740; E-Value: 0
Query Start/End: Original strand, 411 - 1212
Target Start/End: Complemental strand, 36221926 - 36221121
Alignment:
| Q |
411 |
aaatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttacta |
510 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
36221926 |
aaatgcccatttcacaaacaaatacaaacagctctcttgcgaaagaccttccaaaatatacgaaggaacagtactcatcatggaagcaattgagttacta |
36221827 |
T |
|
| Q |
511 |
cgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga |
610 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36221826 |
catgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga |
36221727 |
T |
|
| Q |
611 |
cgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact |
710 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36221726 |
tgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact |
36221627 |
T |
|
| Q |
711 |
tggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggaga--cacatccaaatcttcaattgg |
808 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
36221626 |
tggtggagttgatgctgaagcaaaagcagagttgataattttgataataatgcgcctaatatcaaaatcattggagacacacacccaaatcttcaattgg |
36221527 |
T |
|
| Q |
809 |
aaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaata--acacaaatttttgt |
906 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
36221526 |
aaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacacaaatttttgt |
36221427 |
T |
|
| Q |
907 |
caccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatga |
1006 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36221426 |
caccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctgtcattctccctcccaataacacttgaagcatcaacgtatga |
36221327 |
T |
|
| Q |
1007 |
atgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctattt |
1106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
36221326 |
atgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcacaagtccaaaccttgtcccgtcagctgccaccttattcaatctatct |
36221227 |
T |
|
| Q |
1107 |
ctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt |
1206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36221226 |
ctaatctctttgattttatgtgacatcctaaaacggaaagctagtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt |
36221127 |
T |
|
| Q |
1207 |
tcacaa |
1212 |
Q |
| |
|
|||||| |
|
|
| T |
36221126 |
tcacaa |
36221121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 18 - 346
Target Start/End: Complemental strand, 36222313 - 36221990
Alignment:
| Q |
18 |
catcacacgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaaca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36222313 |
catcacacgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaaca |
36222214 |
T |
|
| Q |
118 |
atagaaaatgaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36222213 |
atagaaaatgaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaa |
36222114 |
T |
|
| Q |
218 |
tatcacctttcttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||| |
|
|
| T |
36222113 |
tatcacctttcttttgttctaagttccaaatctcatggtctcttacgaatatccacttat-----ttaaatcaaattttgataacagagaacttcctaat |
36222019 |
T |
|
| Q |
318 |
gttttgacagccagcggaactccagcaca |
346 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36222018 |
gttttgacagccagcggaactccagcaca |
36221990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 284; E-Value: 1e-158
Query Start/End: Original strand, 412 - 1216
Target Start/End: Complemental strand, 36217934 - 36217132
Alignment:
| Q |
412 |
aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac |
511 |
Q |
| |
|
||||||||||||||||||| | ||||| | |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| |||| |
|
|
| T |
36217934 |
aatgcccatttcacaaacagagacaaacaatcctctaacgaaagaccttccaaaacatacgaaggaacagtacccatcatggaagcaactgagttgctac |
36217835 |
T |
|
| Q |
512 |
gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac |
611 |
Q |
| |
|
|||| |||||||| | ||||||| || || |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||| || |
|
|
| T |
36217834 |
gtgtggtcactataattttacttcctactgcaccaactttgatcaaatcttccaactcaatccattttgcacgatcatcattccatacatcatctagcac |
36217735 |
T |
|
| Q |
612 |
gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacactt |
711 |
Q |
| |
|
||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||| ||| | |||||| | ||||||||| ||| |||| ||||||| |
|
|
| T |
36217734 |
gaggataaacttttggccagatagtttacgtcttagatgaatttgtagttgctcaatgtcacagtggttactatcttcttggggagcaataggaacactt |
36217635 |
T |
|
| Q |
712 |
ggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggagacacat--ccaaatcttcaattgga |
809 |
Q |
| |
|
|||| | |||||||||||| | ||||||||||||||||||| || | || |||||||||||| ||||||||| ||| ||||||||||| | |
|
|
| T |
36217634 |
ggtgca------gctgaagcaaaaacggagttgataattttgataacgatctgtcttatatcaaaatcaacagagacacatgcccacatcttcaattgaa |
36217541 |
T |
|
| Q |
810 |
aaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac--aaatttttgtc |
907 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||| || | | |
|
|
| T |
36217540 |
aaacttcatctatcctcttatcattgtacaccaattttgcaagtgtggtcttccccaatcctccaattcccactatgggaataacacataaacttctatg |
36217441 |
T |
|
| Q |
908 |
accatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaa |
1007 |
Q |
| |
|
||||| ||||| || ||||||| | | ||||||||| | ||||||| ||||| | ||||||||||| || |||||||||||| |||||| | ||| |
|
|
| T |
36217440 |
accatttccataaccttgaggatcggaatccatcaaaagctcgataattgcttccttgtcattctcccttcctataacacttgaaacatcaatatgggaa |
36217341 |
T |
|
| Q |
1008 |
tgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttc |
1107 |
Q |
| |
|
| |||| |||||| | |||||| | | | || |||||| |||||| ||||||||||| | ||||| ||||||||||| |||| |||||||| || |
|
|
| T |
36217340 |
taggtgatttctctattgtgcacagaaagtccgggctcaacatgaattctcacaagtccaaacttggtcccatcagctgccactttatccaatctatctc |
36217241 |
T |
|
| Q |
1108 |
taatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagcttt |
1207 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||| || ||||| |||||||||| |
|
|
| T |
36217240 |
taatctctttgatttgacgtgacatcctaaaacggaaagcaagcggattagaggaagaaaagaagtggcataccttcaaccgtgtgcttccagaagcttc |
36217141 |
T |
|
| Q |
1208 |
cacaaattg |
1216 |
Q |
| |
|
|||||||| |
|
|
| T |
36217140 |
aacaaattg |
36217132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 147; E-Value: 7e-77
Query Start/End: Original strand, 764 - 1212
Target Start/End: Original strand, 36225994 - 36226446
Alignment:
| Q |
764 |
gcctaatatcaaaatcattggaga--cacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtctt |
861 |
Q |
| |
|
|||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||| | ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
36225994 |
gcctaatatcaaaatcatcagagatacacacccacatcttcaattggaaaagatcatcaaccctcttatcgttgaacaccaattttgcaagtgtggtctt |
36226093 |
T |
|
| Q |
862 |
ccccaagccaccaattccaactatgggaata--acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttct |
959 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||| |||| |||||||| |||| || |||||||| || ||||||||||| |||||||| || |
|
|
| T |
36226094 |
ccccaagccaccaattcccactatgggaataacacacaaacttttatcaccatcagcatcaccttgaggatgtggctgcatcaaaagcttgataatatca |
36226193 |
T |
|
| Q |
960 |
tccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcg |
1059 |
Q |
| |
|
| ||| ||||||||||| || || ||| |||||||||||||| |||||||| | ||||||| |||||||| || | | ||||| ||| | |
|
|
| T |
36226194 |
ttcctctcattctcccttcctatcacatctgaagcatcaacgtgggaatgagtcatttctctcttctgcacagcaagtcctaaatcaacactaattgctg |
36226293 |
T |
|
| Q |
1060 |
caagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttga |
1159 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | || |||| ||||||||||||| ||||| | || |
|
|
| T |
36226294 |
caagtccaaacctagtcccatcagctgccaccttattcaatctatccctaatctctttgattcgacatgccatcttaaaacggaaagcaagtggactaga |
36226393 |
T |
|
| Q |
1160 |
ggaagaaaacaagtggcataccttcattcgagtgctgccagaagctttcacaa |
1212 |
Q |
| |
|
||||||||| || |||| ||||||||| | |||||||| ||||||| ||||| |
|
|
| T |
36226394 |
ggaagaaaaaaattggcgtaccttcatcctagtgctgcatgaagcttccacaa |
36226446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 30 - 346
Target Start/End: Complemental strand, 36218310 - 36217999
Alignment:
| Q |
30 |
atattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaaaatgaa |
129 |
Q |
| |
|
||||||| | ||||||| ||||||||||||||||||||| | || |||||| |||||||| | |||||||| | ||| |||||||| ||| ||| | | |
|
|
| T |
36218310 |
atattctctggcaatatgctctagcttttcacttccatttatgggttgaactaatccaaggggtatccacaaaatagtcatttcaacgatattaaaggta |
36218211 |
T |
|
| Q |
130 |
taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct |
229 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||| || |||| ||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
36218210 |
tagtctttgggatacaaggaaaaacaagcaaaacattgtctcagatatgatggcatttgatcatagcttaattttaaagcaggtaaaatatcatctttct |
36218111 |
T |
|
| Q |
230 |
tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagcc |
329 |
Q |
| |
|
| |||||||| ||||| ||||||||||||||||| |||| |||||| || |||||||||||||||||| ||||||||||||| ||| | |||||| |
|
|
| T |
36218110 |
tctgttctaaattccatatctcatggtctcttacaaataaccactt-----atctaaatcaaattttgagaacagagaacttcctaccgttctcacagcc |
36218016 |
T |
|
| Q |
330 |
agcggaactccagcaca |
346 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
36218015 |
agcggaactccagcaca |
36217999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 451 - 734
Target Start/End: Original strand, 32727359 - 32727642
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||||||||| ||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||||| ||| ||| || || |||| |||| |
|
|
| T |
32727359 |
gaaagaccttccaaaacgtacgagggaatagtacccatcattgaagcaaatgagttgctacgtgtcgtcactatgattttgcttcctgctgcaccgactt |
32727458 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg |
650 |
Q |
| |
|
| ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||| || | |||||| ||||||| ||||||||||||| ||| |
|
|
| T |
32727459 |
ttatcaaatctatcaactcaatccattttgcacgatcatcattccatatatcgtctaggacaagcaaaaacttctgaccagcaagtttatgtctttaacg |
32727558 |
T |
|
| Q |
651 |
aatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacacttggtggagttgatgctgaagcaaa |
734 |
Q |
| |
|
| ||||||| |||||||||||||| | ||| |||| |||||||| ||| | || ||||||||||||| ||| |||| |||||| |
|
|
| T |
32727559 |
actttgtagctgctcaatatcaaagttgttgatgttttcttggtgagcaagagaaacacttggtggaactgaagctggagcaaa |
32727642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 821 - 1206
Target Start/End: Original strand, 35982180 - 35982561
Alignment:
| Q |
821 |
atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct |
920 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||| ||||| ||||| || |||||||| || |||||||||||||| | || | ||| ||||| |
|
|
| T |
35982180 |
atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca |
35982275 |
T |
|
| Q |
921 |
ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc |
1020 |
Q |
| |
|
|| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || ||| |||||||||| | |||||||| ||||||| |
|
|
| T |
35982276 |
ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc |
35982375 |
T |
|
| Q |
1021 |
tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat |
1120 |
Q |
| |
|
| | ||||||| | | |||| ||||||| |||||| |||||||||| | ||||| |||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
35982376 |
ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat |
35982475 |
T |
|
| Q |
1121 |
tttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt |
1206 |
Q |
| |
|
| ||||| |||||||| ||| ||||| ||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
35982476 |
tcgatgtgccatcctaagacgaaaagcaagtggattagaggaagaaaagaagtggcgtaccttcgtccgagtgctgccagaagctt |
35982561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 821 - 1206
Target Start/End: Original strand, 36003592 - 36003973
Alignment:
| Q |
821 |
atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct |
920 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||| ||||| ||||| || |||||||| || |||||||||||||| | || | ||| ||||| |
|
|
| T |
36003592 |
atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca |
36003687 |
T |
|
| Q |
921 |
ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc |
1020 |
Q |
| |
|
|| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || ||| |||||||||| | |||||||| ||||||| |
|
|
| T |
36003688 |
ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc |
36003787 |
T |
|
| Q |
1021 |
tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat |
1120 |
Q |
| |
|
| | ||||||| | | |||| ||||||| |||||| |||||||||| | ||||| |||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
36003788 |
ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat |
36003887 |
T |
|
| Q |
1121 |
tttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt |
1206 |
Q |
| |
|
| ||||| |||||||| ||| ||||| ||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
36003888 |
tcgatgtgccatcctaagacgaaaagcaagtggattagaggaagaaaagaagtggcgtaccttcgtccgagtgctgccagaagctt |
36003973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 130 - 340
Target Start/End: Original strand, 35938799 - 35939004
Alignment:
| Q |
130 |
taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct |
229 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| || || |
|
|
| T |
35938799 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggcatttgatcatagcttaattttagtgcaggtaaaatatcattttgct |
35938898 |
T |
|
| Q |
230 |
tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagcc |
329 |
Q |
| |
|
| |||||||| ||||| |||||| |||||||| ||| |||||| |||||||||||||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
35938899 |
tctgttctaaattccatatctcagaatctcttacaaattcccactt-----atttaaatcaaattttgaaaacagagaacttcctaatgttttcacagcc |
35938993 |
T |
|
| Q |
330 |
agcggaactcc |
340 |
Q |
| |
|
|| |||||||| |
|
|
| T |
35938994 |
agtggaactcc |
35939004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 129 - 320
Target Start/End: Original strand, 32727038 - 32727224
Alignment:
| Q |
129 |
ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc |
228 |
Q |
| |
|
||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
32727038 |
ataatctttgggataaagggaaaagaaagcaaaacattgcctcaaataggatggcatttgatcatagcttaacttcaatgcaggtaaaatatcatctttc |
32727137 |
T |
|
| Q |
229 |
ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgtt |
320 |
Q |
| |
|
|| |||||||| ||||| |||||| ||||| || ||||||||||| |||||||||| |||||||||||| ||||||| ||||||| |
|
|
| T |
32727138 |
ttctgttctaaattccatatctcagaatctctcacaaatatccactt-----atttaaatcatattttgagaataaggaacttcgtaatgtt |
32727224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 893 - 1215
Target Start/End: Original strand, 35973546 - 35973868
Alignment:
| Q |
893 |
acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa |
992 |
Q |
| |
|
||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35973546 |
acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa |
35973645 |
T |
|
| Q |
993 |
gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct |
1092 |
Q |
| |
|
||||| || | |||| ||| ||||||||||| |||| |||| | ||||| || |||||| ||||||| |||||| | |||| || ||||| |||| |
|
|
| T |
35973646 |
gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct |
35973745 |
T |
|
| Q |
1093 |
tattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagt |
1192 |
Q |
| |
|
||| ||| |||| | ||| ||||||| | ||| ||| ||| |||||||| | ||||||| ||||| ||||| |||| || ||||||||| | || |
|
|
| T |
35973746 |
tatccaacctatcccgaatgcctttgatctgatggtccattctagaacggaaaacaagtggattggaggaggaaaagaagtagcttaccttcatgctcgt |
35973845 |
T |
|
| Q |
1193 |
gctgccagaagctttcacaaatt |
1215 |
Q |
| |
|
|||||||||||| | |||||||| |
|
|
| T |
35973846 |
gctgccagaagcatccacaaatt |
35973868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 893 - 1215
Target Start/End: Original strand, 35994958 - 35995280
Alignment:
| Q |
893 |
acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa |
992 |
Q |
| |
|
||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35994958 |
acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa |
35995057 |
T |
|
| Q |
993 |
gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct |
1092 |
Q |
| |
|
||||| || | |||| ||| ||||||||||| |||| |||| | ||||| || |||||| ||||||| |||||| | |||| || ||||| |||| |
|
|
| T |
35995058 |
gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct |
35995157 |
T |
|
| Q |
1093 |
tattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagt |
1192 |
Q |
| |
|
||| ||| |||| | ||| ||||||| | ||| ||| ||| |||||||| | ||||||| ||||| ||||| |||| || ||||||||| | || |
|
|
| T |
35995158 |
tatccaacctatcccgaatgcctttgatctgatggtccattctagaacggaaaacaagtggattggaggaggaaaagaagtagcttaccttcatgctcgt |
35995257 |
T |
|
| Q |
1193 |
gctgccagaagctttcacaaatt |
1215 |
Q |
| |
|
|||||||||||| | |||||||| |
|
|
| T |
35995258 |
gctgccagaagcatccacaaatt |
35995280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 451 - 671
Target Start/End: Original strand, 35981797 - 35982017
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||| ||||||||| |||| |||||||||||||||||| ||||| | | ||| ||| | || | ||||||| |
|
|
| T |
35981797 |
gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt |
35981896 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg |
650 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| |||||||||| | |||||| | || || | ||||||||| | |||||||||||||||||||| |
|
|
| T |
35981897 |
tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg |
35981996 |
T |
|
| Q |
651 |
aatttgtagttgctcaatatc |
671 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
35981997 |
agtttgtagttgctcaatatc |
35982017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 451 - 671
Target Start/End: Original strand, 36003209 - 36003429
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||| ||||||||| |||| |||||||||||||||||| ||||| | | ||| ||| | || | ||||||| |
|
|
| T |
36003209 |
gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt |
36003308 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg |
650 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| |||||||||| | |||||| | || || | ||||||||| | |||||||||||||||||||| |
|
|
| T |
36003309 |
tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg |
36003408 |
T |
|
| Q |
651 |
aatttgtagttgctcaatatc |
671 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
36003409 |
agtttgtagttgctcaatatc |
36003429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 412 - 671
Target Start/End: Original strand, 35946529 - 35946788
Alignment:
| Q |
412 |
aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac |
511 |
Q |
| |
|
||||||||||| ||||||| | ||||| | ||| | | |||||||||||||||||||| | ||||||| ||||||||| |||||||||| |||||| | |
|
|
| T |
35946529 |
aatgcccatttgacaaacagagacaaacaattctttggagaaagaccttccaaaatatatggaggaacatcacccatcatcgaagcaattgcgttactgc |
35946628 |
T |
|
| Q |
512 |
gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac |
611 |
Q |
| |
|
|||| ||||| || | ||| ||| || | |||||||||| ||||||| | ||| |||| ||| |||||||| ||||||||||||| ||||||| || |
|
|
| T |
35946629 |
gtgttgtcaccataattttgcttcctggtgcaccaacttttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacac |
35946728 |
T |
|
| Q |
612 |
gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatc |
671 |
Q |
| |
|
|| | ||||||||||||||||||||| |||||||||||| || ||||||| ||||||| |
|
|
| T |
35946729 |
gactaaaaacttttgaccagaaagtttttgtcttagacgacttactagttgcacaatatc |
35946788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 739 - 942
Target Start/End: Original strand, 35939415 - 35939622
Alignment:
| Q |
739 |
gagttgataattttgataataatgcgcctaatatcaaaatcattggagacacat--ccaaatcttcaattggaaaatatcatctatcctcttatcattga |
836 |
Q |
| |
|
|||||||| ||||| ||||| || |||| |||||||| |||||||||||||| ||| |||||||||||||||| | || | |||||||||||||| |
|
|
| T |
35939415 |
gagttgattattttaataattatctgcctgatatcaaactcattggagacacacaaccacatcttcaattggaaaagttgattcaccctcttatcattga |
35939514 |
T |
|
| Q |
837 |
acaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac--aaatttttgtcaccatctccatctccatgaggatgcgg |
934 |
Q |
| |
|
|||||||| ||||||||||||||||||| || || |||||||| || ||||||||||||| ||| |||| |||||||| ||||| || |||||||| || |
|
|
| T |
35939515 |
acaccaactttgcaagtgtggtcttccctaatcctccaattcccacaatgggaataacacataaacttttatcaccatcaccatcaccgtgaggatgtgg |
35939614 |
T |
|
| Q |
935 |
ttgcatca |
942 |
Q |
| |
|
|||||||| |
|
|
| T |
35939615 |
ttgcatca |
35939622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 35976915 - 35977118
Alignment:
| Q |
129 |
ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc |
228 |
Q |
| |
|
||||||||||||||| | ||||| |||| ||||||| || |||| ||| |||||||||| ||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
35976915 |
ataatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttc |
35977014 |
T |
|
| Q |
229 |
ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagc |
328 |
Q |
| |
|
||||||||||| ||||| |||||| ||| || |||||| |||||| ||| |||||| |||||||| |||||||||||||||||| | ||||| |
|
|
| T |
35977015 |
ttttgttctaaattccacatctcagagtccctaacgaattcccactt-----gcttatatcaaagtttgagaagagagaacttcctaatgttctcacagc |
35977109 |
T |
|
| Q |
329 |
cagcggaac |
337 |
Q |
| |
|
|||||||| |
|
|
| T |
35977110 |
tagcggaac |
35977118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 451 - 671
Target Start/End: Original strand, 35977231 - 35977451
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| || | ||||||||| |
|
|
| T |
35977231 |
gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt |
35977330 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg |
650 |
Q |
| |
|
| ||||||| | ||| |||| ||| |||||||| ||||||||||||| ||||||| |||| | ||||||||||||||||||||| ||||| ||||| |
|
|
| T |
35977331 |
ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg |
35977430 |
T |
|
| Q |
651 |
aatttgtagttgctcaatatc |
671 |
Q |
| |
|
| || ||||||| ||||||| |
|
|
| T |
35977431 |
acttactagttgcacaatatc |
35977451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 35998327 - 35998530
Alignment:
| Q |
129 |
ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc |
228 |
Q |
| |
|
||||||||||||||| | ||||| |||| ||||||| || |||| ||| |||||||||| ||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
35998327 |
ataatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttc |
35998426 |
T |
|
| Q |
229 |
ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagc |
328 |
Q |
| |
|
||||||||||| ||||| |||||| ||| || |||||| |||||| ||| |||||| |||||||| |||||||||||||||||| | ||||| |
|
|
| T |
35998427 |
ttttgttctaaattccacatctcagagtccctaacgaattcccactt-----gcttatatcaaagtttgagaagagagaacttcctaatgttctcacagc |
35998521 |
T |
|
| Q |
329 |
cagcggaac |
337 |
Q |
| |
|
|||||||| |
|
|
| T |
35998522 |
tagcggaac |
35998530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 451 - 671
Target Start/End: Original strand, 35998643 - 35998863
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| || | ||||||||| |
|
|
| T |
35998643 |
gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt |
35998742 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg |
650 |
Q |
| |
|
| ||||||| | ||| |||| ||| |||||||| ||||||||||||| ||||||| |||| | ||||||||||||||||||||| ||||| ||||| |
|
|
| T |
35998743 |
ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg |
35998842 |
T |
|
| Q |
651 |
aatttgtagttgctcaatatc |
671 |
Q |
| |
|
| || ||||||| ||||||| |
|
|
| T |
35998843 |
acttactagttgcacaatatc |
35998863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 133 - 340
Target Start/End: Original strand, 35981485 - 35981687
Alignment:
| Q |
133 |
tctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttctttt |
232 |
Q |
| |
|
||||||||||| | |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| || | ||||||||||||||| ||||||| | |
|
|
| T |
35981485 |
tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct |
35981584 |
T |
|
| Q |
233 |
gttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagc |
332 |
Q |
| |
|
| |||| ||||| | |||| || ||||| |||| |||||| ||||||||||| ||||| || || ||||||||||||||||||||||| || |
|
|
| T |
35981585 |
gctctagattccataactcagaatcccttacaaatacccactt-----atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagt |
35981679 |
T |
|
| Q |
333 |
ggaactcc |
340 |
Q |
| |
|
|||||||| |
|
|
| T |
35981680 |
ggaactcc |
35981687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 133 - 340
Target Start/End: Original strand, 36002897 - 36003099
Alignment:
| Q |
133 |
tctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttctttt |
232 |
Q |
| |
|
||||||||||| | |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| || | ||||||||||||||| ||||||| | |
|
|
| T |
36002897 |
tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct |
36002996 |
T |
|
| Q |
233 |
gttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagc |
332 |
Q |
| |
|
| |||| ||||| | |||| || ||||| |||| |||||| ||||||||||| ||||| || || ||||||||||||||||||||||| || |
|
|
| T |
36002997 |
gctctagattccataactcagaatcccttacaaatacccactt-----atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagt |
36003091 |
T |
|
| Q |
333 |
ggaactcc |
340 |
Q |
| |
|
|||||||| |
|
|
| T |
36003092 |
ggaactcc |
36003099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 35957460 - 35957583
Alignment:
| Q |
129 |
ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc |
228 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| || |||| ||| |||||||||| |||||| |||||||||| ||||||||||||||| || |
|
|
| T |
35957460 |
ataatctttgggataaagggaaaaataagcaaaacattgtctcagatatgatggcatttgatcataacttaattttagcgcaggtaaaatatcattaatc |
35957559 |
T |
|
| Q |
229 |
ttttgttctaagttccaaatctca |
252 |
Q |
| |
|
||||||||||| ||||| |||||| |
|
|
| T |
35957560 |
ttttgttctaaattccacatctca |
35957583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 787 - 957
Target Start/End: Original strand, 35958123 - 35958295
Alignment:
| Q |
787 |
acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg |
886 |
Q |
| |
|
||||| ||| |||||||| ||||||| | ||| ||||||||||||||||||||| || |||||||||| ||||| ||||| || |||||||| ||||| |
|
|
| T |
35958123 |
acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaagtgttgtctttcccaaacctccaattcccactatt |
35958222 |
T |
|
| Q |
887 |
ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataattt |
957 |
Q |
| |
|
||||| |||| | | | || |||||||| |||||||| ||||||| || ||||||||||| |||||||||| |
|
|
| T |
35958223 |
ggaatgacacagagactattatcaccatcaccatctccgcgaggatgtggctgcatcaaaagattgataattt |
35958295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 1083 - 1220
Target Start/End: Original strand, 35958415 - 35958552
Alignment:
| Q |
1083 |
gctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcatacct |
1182 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| || | ||| ||||||||||||| ||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
35958415 |
gctgccaccttatccaatctatccctaatctctttgatttggtgcgccattttaaaacggaaagcaagtgaattagaggaagaaaacaagtggcgtacct |
35958514 |
T |
|
| Q |
1183 |
tcattcgagtgctgccagaagctttcacaaattgtttt |
1220 |
Q |
| |
|
||| || ||||| |||||||||| ||||| ||||||| |
|
|
| T |
35958515 |
tcacccgtgtgcttccagaagcttccacaacttgtttt |
35958552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 148 - 320
Target Start/End: Original strand, 35946271 - 35946438
Alignment:
| Q |
148 |
gaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttttgttctaagttccaaa |
247 |
Q |
| |
|
||||||||||||||||| || || | ||| |||||||||| |||||| |||||||||| |||||||| |||||| |||||||||||||||| ||||| | |
|
|
| T |
35946271 |
gaaaaataagcaaaacattgtcttagatatgatggcatttgatcataacttaattttagcgcaggtaagatatcatctttcttttgttctaaattccaca |
35946370 |
T |
|
| Q |
248 |
tctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgtt |
320 |
Q |
| |
|
||||| ||| || |||||| |||||| | ||| |||||| |||||||| ||||||||| |||||||| |
|
|
| T |
35946371 |
tctcagagtccctaacgaattcccactt-----acttatatcaaagtttgagaagagagaacttgctaatgtt |
35946438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1080 - 1212
Target Start/End: Original strand, 35977867 - 35977999
Alignment:
| Q |
1080 |
tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata |
1179 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||| | ||| |||||||||||||||| | ||||||| ||||||||||| ||||||| || |
|
|
| T |
35977867 |
tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacggaaaacaagtggattagaggaagaaaagaagtggcgta |
35977966 |
T |
|
| Q |
1180 |
ccttcattcgagtgctgccagaagctttcacaa |
1212 |
Q |
| |
|
|||||| || |||| | |||||||||||||| |
|
|
| T |
35977967 |
ccttcacccgtctgcttcgagaagctttcacaa |
35977999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1080 - 1212
Target Start/End: Original strand, 35999279 - 35999411
Alignment:
| Q |
1080 |
tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata |
1179 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||| | ||| |||||||||||||||| | ||||||| ||||||||||| ||||||| || |
|
|
| T |
35999279 |
tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacggaaaacaagtggattagaggaagaaaagaagtggcgta |
35999378 |
T |
|
| Q |
1180 |
ccttcattcgagtgctgccagaagctttcacaa |
1212 |
Q |
| |
|
|||||| || |||| | |||||||||||||| |
|
|
| T |
35999379 |
ccttcacccgtctgcttcgagaagctttcacaa |
35999411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 825 - 894
Target Start/End: Original strand, 35965669 - 35965738
Alignment:
| Q |
825 |
tcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataac |
894 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
35965669 |
tcttatcattgaacaccaagtttgcaagtgtggtcttccccaagccaccaattcctagtatgggaataac |
35965738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 787 - 951
Target Start/End: Original strand, 35946918 - 35947084
Alignment:
| Q |
787 |
acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg |
886 |
Q |
| |
|
||||| ||| |||||||| ||||||| | || |||||||||||||||||||||| || | |||||||||||||||| ||| || |||||||| ||||| |
|
|
| T |
35946918 |
acacacccacatcttcaactggaaaagttgatgtatcctcttatcattgaacaccgacttcgcaagtgtggtcttccacaaacctccaattcccactatt |
35947017 |
T |
|
| Q |
887 |
ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttga |
951 |
Q |
| |
|
||||| |||| | | | || |||||||| ||||| || |||||||| || ||||||||||| |||| |
|
|
| T |
35947018 |
ggaatgacacagagactattatcaccatcaccatcgccgtgaggatgtggctgcatcaaaagattga |
35947084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1080 - 1212
Target Start/End: Original strand, 35947207 - 35947339
Alignment:
| Q |
1080 |
tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata |
1179 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||| | ||| |||||||||||| ||| | ||||||| ||||||||||| |||||| || |
|
|
| T |
35947207 |
tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacgaaaaacaagtggattagaggaagaaaagaagtggacta |
35947306 |
T |
|
| Q |
1180 |
ccttcattcgagtgctgccagaagctttcacaa |
1212 |
Q |
| |
|
||||| || ||||| | |||||||||||||| |
|
|
| T |
35947307 |
acttcacccgtgtgcttcgagaagctttcacaa |
35947339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 787 - 899
Target Start/End: Original strand, 35977578 - 35977690
Alignment:
| Q |
787 |
acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg |
886 |
Q |
| |
|
||||| ||| |||||||| ||||||| | ||| ||||||||||||||||||||| || |||||| |||||||||||||| || |||||||| ||||| |
|
|
| T |
35977578 |
acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt |
35977677 |
T |
|
| Q |
887 |
ggaataacacaaa |
899 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
35977678 |
ggaatgacacaaa |
35977690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 787 - 899
Target Start/End: Original strand, 35998990 - 35999102
Alignment:
| Q |
787 |
acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg |
886 |
Q |
| |
|
||||| ||| |||||||| ||||||| | ||| ||||||||||||||||||||| || |||||| |||||||||||||| || |||||||| ||||| |
|
|
| T |
35998990 |
acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt |
35999089 |
T |
|
| Q |
887 |
ggaataacacaaa |
899 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
35999090 |
ggaatgacacaaa |
35999102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 468 - 639
Target Start/End: Original strand, 35939131 - 35939306
Alignment:
| Q |
468 |
atacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaac |
567 |
Q |
| |
|
|||||| |||||| | ||| |||| |||||||| || ||||| ||||| ||||| |||| ||| | |||| || |||||||| ||||||| | |||| |
|
|
| T |
35939131 |
atacgagggaacagtgcccgtcattgaagcaatcgatttactgcgtgttgtcacaatgattttgcattctactgtgccaacttttatcaaatctttcaac |
35939230 |
T |
|
| Q |
568 |
tcaatccattttgcacggtcatc----attccatatatcatctaggacgaggataaacttttgaccagaaagttta |
639 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||| |
|
|
| T |
35939231 |
tcaatccattttgaacgatcatccatcattccatatgtcatctaacacgagtaaaaacttttgaccagaaagttta |
35939306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 147 - 337
Target Start/End: Original strand, 35951909 - 35952094
Alignment:
| Q |
147 |
ggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttttgttctaagttccaa |
246 |
Q |
| |
|
||||||| | |||| |||||| || | |||||||| ||||| ||||||||||||||| | ||||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
35951909 |
ggaaaaagaggcaatacaatgtcttagataggatgacatttgatcatagcttaatttcagggcaggtaaaatatcatctttctgttgttctaaattccaa |
35952008 |
T |
|
| Q |
247 |
atctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaac |
337 |
Q |
| |
|
|| || |||||| || ||| |||||| | ||||||| || |||||||| || |||||||| |||| ||| |||||||| ||||| |
|
|
| T |
35952009 |
atagcagagtctctgacaaattcccactt-----acttaaatcgaagtttgagaagagggaacttcccaatgatttcacagccagtggaac |
35952094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 483 - 651
Target Start/End: Original strand, 35957808 - 35957976
Alignment:
| Q |
483 |
acccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgca |
582 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||||| || | ||| ||| || | |||||||||| ||||| | | ||| |||| ||| |||||| |
|
|
| T |
35957808 |
acccatcattgaagcaattgagttactgcgtgttgtcacgataattttgcttcctggtgcaccaacttttatcaattcgatcaattcaagccactttgca |
35957907 |
T |
|
| Q |
583 |
cggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacga |
651 |
Q |
| |
|
|| ||||||||||||| ||||||| || | | ||||||||||||||||||||| ||| | |||||| |
|
|
| T |
35957908 |
cgatcatcattccatacgtcatctaacacaactaaaaacttttgaccagaaagtttttgtttgagacga |
35957976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 772 - 895
Target Start/End: Original strand, 29602862 - 29602987
Alignment:
| Q |
772 |
tcaaaatcattggagacacat--ccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagc |
869 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||| ||| ||||| | || |||| |||||||||||||||||| | |||||||||| ||||| ||||||| |
|
|
| T |
29602862 |
tcaaaatcatcggagacacacacccacatctttaatgggaaagtctcgtctaaactcttatcattgaacaccgtctttgcaagtgtagtctttcccaagc |
29602961 |
T |
|
| Q |
870 |
caccaattccaactatgggaataaca |
895 |
Q |
| |
|
| ||||||||||| || ||||||||| |
|
|
| T |
29602962 |
ctccaattccaacaataggaataaca |
29602987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 797 - 897
Target Start/End: Original strand, 35955182 - 35955282
Alignment:
| Q |
797 |
atcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac |
896 |
Q |
| |
|
|||||||||| |||||| | ||| | ||| | |||||||||||| ||| |||||||||||||||| ||||| || ||||| || | |||||||||||||| |
|
|
| T |
35955182 |
atcttcaatttgaaaatttgatccaccctttcatcattgaacactaactttgcaagtgtggtctttcccaatcctccaatacctattatgggaataacac |
35955281 |
T |
|
| Q |
897 |
a |
897 |
Q |
| |
|
| |
|
|
| T |
35955282 |
a |
35955282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 824 - 895
Target Start/End: Complemental strand, 29750378 - 29750307
Alignment:
| Q |
824 |
ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca |
895 |
Q |
| |
|
|||||||||||||||||| | |||||||||| ||||| |||||||| ||||||||||| || ||||||||| |
|
|
| T |
29750378 |
ctcttatcattgaacaccgtctttgcaagtgtagtctttcccaagcctccaattccaacaataggaataaca |
29750307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 824 - 895
Target Start/End: Complemental strand, 29743341 - 29743270
Alignment:
| Q |
824 |
ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca |
895 |
Q |
| |
|
||||||||||||||||| | ||||||| || ||||| |||||||| ||||||||||| || ||||||||| |
|
|
| T |
29743341 |
ctcttatcattgaacactgtctttgcaagcgtagtctttcccaagcctccaattccaacaataggaataaca |
29743270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 3e-36; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 484 - 694
Target Start/End: Complemental strand, 26328895 - 26328685
Alignment:
| Q |
484 |
cccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcac |
583 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| ||||||| || ||| |||||| || |||||||||| |||| || | ||||||||||||||||| || |
|
|
| T |
26328895 |
cccatcatcgaagcaatcaagttactacgtgttgtcactaagattttgctttctactgcaccaacttttatcagatctttcaactcaatccattttgaac |
26328796 |
T |
|
| Q |
584 |
ggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaat |
683 |
Q |
| |
|
||| ||||| |||||||||||||| |||||| | |||||||| ||| ||||| |||||||| |||||| | || ||||||||||||||| || | ||| |
|
|
| T |
26328795 |
ggttatcatcccatatatcatctaagacgagtacaaactttttacctgaaagcttatgtctaagacgactcactaattgctcaatatcaaagtgttcaat |
26328696 |
T |
|
| Q |
684 |
gtcttcttggt |
694 |
Q |
| |
|
|| |||||||| |
|
|
| T |
26328695 |
gttttcttggt |
26328685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 26329244 - 26329140
Alignment:
| Q |
129 |
ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc |
228 |
Q |
| |
|
||||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || | |||||||||||||| |||| |
|
|
| T |
26329244 |
ataatctttgggaaaaagggaaaaataagcaaaacaatgtctcaaataggatggcatttgatcatagcttaacttaagcacaggtaaaatatcatctttg |
26329145 |
T |
|
| Q |
229 |
ttttg |
233 |
Q |
| |
|
||||| |
|
|
| T |
26329144 |
ttttg |
26329140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 79; Significance: 3e-36; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 412 - 694
Target Start/End: Original strand, 18117804 - 18118086
Alignment:
| Q |
412 |
aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac |
511 |
Q |
| |
|
||||||||||||||||||||| | ||| || | || ||||| |||| |||| ||| || |||||| |||||||||| || ||||||||||| || | |
|
|
| T |
18117804 |
aatgcccatttcacaaacaaagataaacagttttcaatagaaaggccttttaaaacataggagggaacagtacccatcatcgatgcaattgagttgctgc |
18117903 |
T |
|
| Q |
512 |
gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac |
611 |
Q |
| |
|
|||| ||| | |||||||| ||| || || |||||||| ||||||| | |||||| ||||||||| ||| |||||||||||||||||||||| || |
|
|
| T |
18117904 |
gtgttgtcgccatgactttgcttcctactgtgccaactttaatcaaatctttcaactcgatccattttacacaatcatcattccatatatcatctaacac |
18118003 |
T |
|
| Q |
612 |
gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggt |
694 |
Q |
| |
|
|| | |||| ||| |||| |||||||| |||| |||||| ||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
18118004 |
aagtaaaaaccttttaccataaagtttacgtctcagacgactttgtagctgctcaatatcaaaatggtttatgttttcttggt |
18118086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 787 - 1000
Target Start/End: Original strand, 18125831 - 18126046
Alignment:
| Q |
787 |
acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg |
886 |
Q |
| |
|
||||| ||| ||||||||||| || | |||||||| |||||||||||||| || | | |||| | ||||||||||||||||||||||||||| || ||| |
|
|
| T |
18125831 |
acacacccacatcttcaattgaaagagttcatctattctcttatcattgaaaacaagctttgccaatgtggtcttccccaagccaccaattcccaccatg |
18125930 |
T |
|
| Q |
887 |
ggaataacacaaat--ttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataa |
984 |
Q |
| |
|
||||||||| | | |||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| |||||||||||| |||| || || || | |
|
|
| T |
18125931 |
ggaataacagatagacttttatcaccatcaccatcaccatgaggatgtgcttgcatcaaaagcttgataatctcttccctatcactctctcttcctatta |
18126030 |
T |
|
| Q |
985 |
cacttgaagcatcaac |
1000 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
18126031 |
cactcaaagcatcaac |
18126046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 27 - 337
Target Start/End: Original strand, 18125078 - 18125383
Alignment:
| Q |
27 |
aatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaaaat |
126 |
Q |
| |
|
|||||||||| ||||||||| |||||| ||||||||||| ||| || |||||| |||||||| |||| ||| ||| | |||| || | | || | || |
|
|
| T |
18125078 |
aatatattctcttgcaatatcctctagtttttcacttccgttccggggttgaactaatccaagggctacccaaagagcaataatatccaaactacagaaa |
18125177 |
T |
|
| Q |
127 |
gaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctt |
226 |
Q |
| |
|
| | |||||| ||||| | ||| ||||||||||| || ||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||| ||| |
|
|
| T |
18125178 |
gtaatatctttaggataaagggagaaataagcaaagcattgccttaaataggatggcatttggtcatagctcaattttagtgcaggtaaaatatcatctt |
18125277 |
T |
|
| Q |
227 |
tcttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgaca |
326 |
Q |
| |
|
| | |||| ||| ||||| | |||| |||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
18125278 |
tttgctgttttaaattccacagctcagaatctcttacaaatatcca-----tgtatttaaatcaaattttgagaatagggaacttcctaatgttctaaca |
18125372 |
T |
|
| Q |
327 |
gccagcggaac |
337 |
Q |
| |
|
|| || ||||| |
|
|
| T |
18125373 |
gctagtggaac |
18125383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 18117530 - 18117659
Alignment:
| Q |
132 |
atctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttt |
231 |
Q |
| |
|
|||||||||||||| | || |||||||| || ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||| |
|
|
| T |
18117530 |
atctttgggatacatagcaatgtaagcaaagcagtgccttaaataggatggcattttatcatagcttaattttagtgcaggtaaaatatcattttgcttt |
18117629 |
T |
|
| Q |
232 |
tgttctaagttccaaatctcatggtctctt |
261 |
Q |
| |
|
|||||||| |||| |||||| ||||||| |
|
|
| T |
18117630 |
tgttctaaagtccacatctcagagtctctt |
18117659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 740 - 867
Target Start/End: Original strand, 18118138 - 18118267
Alignment:
| Q |
740 |
agttgataattttgataataatgcgcctaatatcaaaatcattggagacacatcc--aaatcttcaattggaaaatatcatctatcctcttatcattgaa |
837 |
Q |
| |
|
||||||| ||||||||||| ||| || |||||| ||||| |||||||||||| | | ||||||||||| |||| ||||| ||||||||||| ||||| |
|
|
| T |
18118138 |
agttgattattttgataattatgtgcataatataaaaataattggagacacagactcacatcttcaattgaaaaaattcatcgatcctcttatcgttgaa |
18118237 |
T |
|
| Q |
838 |
caccaaccttgcaagtgtggtcttccccaa |
867 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
18118238 |
taccaactttgcaagtgtggtcttccccaa |
18118267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 451 - 628
Target Start/End: Original strand, 18125496 - 18125673
Alignment:
| Q |
451 |
gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt |
550 |
Q |
| |
|
|||||||||| ||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||| ||||| || | ||| ||| || | ||||||| |
|
|
| T |
18125496 |
gaaagaccttgcaaaacatatgagggaacattacccatcatcgaagcaattgagttattacgtgttgtcaccataattttgcttcctcttgtgccaactt |
18125595 |
T |
|
| Q |
551 |
tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgac |
628 |
Q |
| |
|
| ||||||| | |||||| ||||| |||||||| ||||||||||||| |||||||| || || | ||||||||||| |
|
|
| T |
18125596 |
ttatcaaatctttcaactcgatccactttgcacgatcatcattccatacatcatctaacacaagtaaaaacttttgac |
18125673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1059 - 1188
Target Start/End: Original strand, 18126105 - 18126234
Alignment:
| Q |
1059 |
gcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttg |
1158 |
Q |
| |
|
|||||||||||| | ||||| || | ||| ||||||| |||||||| ||||| ||||| |||| | || |||||||| ||| ||||| ||| ||| | |
|
|
| T |
18126105 |
gcaagtccaaacttagtcccatcggttgctaccttatccaatctatccctaatatctttaatttgttttgccatcctaagacgaaaagcaagtgaattgg |
18126204 |
T |
|
| Q |
1159 |
aggaagaaaacaagtggcataccttcattc |
1188 |
Q |
| |
|
||||| | || ||||||| ||||||||||| |
|
|
| T |
18126205 |
aggaacagaagaagtggcgtaccttcattc |
18126234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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