View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9241_low_19 (Length: 414)

Name: NF9241_low_19
Description: NF9241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9241_low_19
NF9241_low_19
[»] chr3 (44 HSPs)
chr3 (1-321)||(36868192-36868512)
chr3 (1-105)||(36851691-36851794)
chr3 (341-409)||(36868558-36868626)
chr3 (1-117)||(37371192-37371307)
chr3 (1-117)||(36862143-36862258)
chr3 (244-312)||(50960844-50960912)
chr3 (202-312)||(21200553-21200661)
chr3 (245-312)||(49503766-49503833)
chr3 (244-312)||(39600892-39600960)
chr3 (244-312)||(54128381-54128449)
chr3 (244-312)||(52138803-52138871)
chr3 (244-299)||(39235154-39235209)
chr3 (238-312)||(26490318-26490392)
chr3 (256-313)||(29817506-29817563)
chr3 (247-312)||(41842725-41842790)
chr3 (353-409)||(27917490-27917546)
chr3 (349-405)||(29919226-29919282)
chr3 (349-405)||(29928586-29928642)
chr3 (349-405)||(29968379-29968435)
chr3 (349-405)||(29977740-29977796)
chr3 (244-312)||(38430851-38430919)
chr3 (244-311)||(42510227-42510292)
chr3 (244-312)||(43694976-43695044)
chr3 (349-409)||(49841529-49841589)
chr3 (245-312)||(5168835-5168902)
chr3 (245-312)||(36820173-36820240)
chr3 (371-406)||(44395346-44395381)
chr3 (249-300)||(45289307-45289358)
chr3 (245-312)||(47233808-47233875)
chr3 (246-308)||(3987054-3987116)
chr3 (244-310)||(19737002-19737068)
chr3 (244-310)||(19757905-19757971)
chr3 (371-409)||(46568034-46568072)
chr3 (247-293)||(48734349-48734395)
chr3 (246-312)||(49841622-49841688)
chr3 (250-312)||(54365194-54365255)
chr3 (352-405)||(40562520-40562573)
chr3 (247-312)||(51447924-51447989)
chr3 (353-405)||(26490239-26490291)
chr3 (264-312)||(34719303-34719351)
chr3 (349-409)||(36820263-36820323)
chr3 (244-312)||(38060434-38060502)
chr3 (349-405)||(45236778-45236834)
chr3 (349-409)||(45728064-45728124)
[»] chr4 (46 HSPs)
chr4 (244-311)||(29398822-29398889)
chr4 (247-312)||(31459033-31459098)
chr4 (236-305)||(42285903-42285972)
chr4 (237-310)||(46715576-46715649)
chr4 (236-312)||(35555850-35555926)
chr4 (236-312)||(51252664-51252740)
chr4 (246-308)||(50662394-50662457)
chr4 (246-312)||(28236186-28236252)
chr4 (246-312)||(54470210-54470276)
chr4 (236-309)||(42639223-42639296)
chr4 (244-300)||(47611742-47611798)
chr4 (217-312)||(31339540-31339634)
chr4 (245-312)||(31960026-31960093)
chr4 (245-312)||(43433927-43433994)
chr4 (245-312)||(52569727-52569794)
chr4 (245-312)||(53707797-53707864)
chr4 (236-310)||(38570950-38571024)
chr4 (246-299)||(30853373-30853426)
chr4 (244-312)||(436232-436300)
chr4 (349-405)||(20105775-20105831)
chr4 (236-308)||(33709931-33710003)
chr4 (264-312)||(38266149-38266197)
chr4 (244-312)||(41192839-41192907)
chr4 (247-299)||(44860862-44860914)
chr4 (349-409)||(49987346-49987406)
chr4 (256-308)||(49987435-49987487)
chr4 (244-300)||(50471541-50471597)
chr4 (245-312)||(33227212-33227279)
chr4 (245-312)||(48622755-48622822)
chr4 (246-312)||(1793463-1793529)
chr4 (246-312)||(20591513-20591579)
chr4 (246-312)||(28497493-28497558)
chr4 (371-409)||(44860772-44860810)
chr4 (245-310)||(4440858-4440923)
chr4 (247-312)||(30621418-30621483)
chr4 (247-312)||(37797855-37797920)
chr4 (371-404)||(40933222-40933255)
chr4 (244-312)||(10209037-10209105)
chr4 (237-277)||(13805469-13805509)
chr4 (244-312)||(31403229-31403295)
chr4 (349-409)||(31403324-31403384)
chr4 (256-312)||(42293472-42293528)
chr4 (135-195)||(44641936-44641996)
chr4 (135-179)||(44686700-44686744)
chr4 (353-405)||(45205156-45205208)
chr4 (353-409)||(56375208-56375264)
[»] scaffold0018 (2 HSPs)
scaffold0018 (243-312)||(44078-44147)
scaffold0018 (245-312)||(31471-31538)
[»] chr7 (64 HSPs)
chr7 (1-114)||(17615648-17615760)
chr7 (245-312)||(12966025-12966092)
chr7 (249-309)||(7189442-7189502)
chr7 (248-312)||(42187473-42187537)
chr7 (250-312)||(38920797-38920859)
chr7 (246-312)||(40169652-40169718)
chr7 (237-299)||(41948532-41948594)
chr7 (246-312)||(47848677-47848743)
chr7 (247-312)||(27021906-27021971)
chr7 (247-312)||(28020967-28021032)
chr7 (244-312)||(19262644-19262712)
chr7 (349-409)||(30200263-30200323)
chr7 (244-312)||(36101976-36102044)
chr7 (236-312)||(36514410-36514486)
chr7 (245-312)||(12841487-12841554)
chr7 (245-312)||(13859220-13859287)
chr7 (245-312)||(34869423-34869490)
chr7 (245-312)||(35906413-35906480)
chr7 (245-312)||(49029279-49029346)
chr7 (371-409)||(5335840-5335878)
chr7 (247-312)||(2885936-2886001)
chr7 (245-294)||(24549905-24549954)
chr7 (246-291)||(35713719-35713764)
chr7 (246-290)||(6420703-6420747)
chr7 (244-308)||(7273046-7273110)
chr7 (244-312)||(28628144-28628212)
chr7 (244-308)||(30200174-30200238)
chr7 (245-312)||(6374871-6374938)
chr7 (246-309)||(7220750-7220813)
chr7 (245-312)||(11593963-11594030)
chr7 (245-312)||(22349623-22349690)
chr7 (245-312)||(31005226-31005293)
chr7 (245-312)||(33072955-33073022)
chr7 (245-312)||(39906582-39906649)
chr7 (245-312)||(43281677-43281744)
chr7 (245-312)||(45836692-45836759)
chr7 (217-312)||(46989906-46990001)
chr7 (371-409)||(14593679-14593717)
chr7 (371-409)||(16013202-16013240)
chr7 (246-312)||(18605359-18605425)
chr7 (246-312)||(18637565-18637631)
chr7 (246-312)||(18650999-18651065)
chr7 (371-409)||(24550013-24550051)
chr7 (246-312)||(25579290-25579356)
chr7 (371-409)||(36514531-36514569)
chr7 (371-409)||(36869615-36869653)
chr7 (350-408)||(40139221-40139279)
chr7 (246-312)||(43282411-43282477)
chr7 (245-307)||(44855384-44855446)
chr7 (246-312)||(46356069-46356135)
chr7 (371-405)||(47848596-47848630)
chr7 (245-294)||(38135424-38135473)
chr7 (210-291)||(48202879-48202960)
chr7 (349-402)||(48736203-48736256)
chr7 (349-409)||(1740715-1740775)
chr7 (236-312)||(5335923-5335999)
chr7 (236-308)||(14593772-14593844)
chr7 (264-312)||(26742127-26742175)
chr7 (245-309)||(33350018-33350082)
chr7 (244-312)||(36136767-36136835)
chr7 (353-409)||(37617862-37617918)
chr7 (245-312)||(37617947-37618015)
chr7 (244-312)||(40830226-40830294)
chr7 (349-405)||(42187393-42187448)
[»] chr1 (39 HSPs)
chr1 (244-312)||(5338727-5338795)
chr1 (244-312)||(27848016-27848084)
chr1 (246-312)||(48431619-48431685)
chr1 (244-312)||(35828761-35828829)
chr1 (245-312)||(34792561-34792628)
chr1 (246-308)||(43423726-43423788)
chr1 (251-312)||(14226047-14226108)
chr1 (247-312)||(40416374-40416439)
chr1 (244-312)||(1661433-1661501)
chr1 (244-312)||(2544602-2544670)
chr1 (236-312)||(3819059-3819135)
chr1 (349-405)||(4379927-4379983)
chr1 (353-409)||(9599702-9599758)
chr1 (349-409)||(52442808-52442868)
chr1 (245-312)||(1210748-1210815)
chr1 (237-300)||(8343062-8343125)
chr1 (245-312)||(9509321-9509388)
chr1 (249-312)||(38868885-38868948)
chr1 (245-312)||(51602059-51602126)
chr1 (244-310)||(13827928-13827994)
chr1 (247-312)||(8671921-8671986)
chr1 (349-409)||(9509236-9509296)
chr1 (244-308)||(32404737-32404801)
chr1 (349-405)||(34827406-34827462)
chr1 (245-312)||(15085937-15086004)
chr1 (245-312)||(22090099-22090166)
chr1 (237-312)||(23791848-23791923)
chr1 (346-409)||(26016355-26016418)
chr1 (245-312)||(39140523-39140590)
chr1 (245-308)||(51440977-51441040)
chr1 (244-294)||(10569278-10569328)
chr1 (246-312)||(32231167-32231233)
chr1 (247-312)||(4380016-4380081)
chr1 (244-313)||(36340014-36340083)
chr1 (349-409)||(1661344-1661404)
chr1 (244-300)||(16822233-16822289)
chr1 (250-294)||(17815493-17815537)
chr1 (244-312)||(19908250-19908318)
chr1 (249-305)||(51812535-51812591)
[»] chr8 (31 HSPs)
chr8 (217-312)||(29700279-29700374)
chr8 (248-312)||(9695634-9695698)
chr8 (246-300)||(35643814-35643868)
chr8 (249-310)||(13171865-13171926)
chr8 (247-312)||(45512709-45512774)
chr8 (245-312)||(12491350-12491417)
chr8 (246-312)||(18474173-18474239)
chr8 (246-300)||(41971991-41972045)
chr8 (244-277)||(79081-79114)
chr8 (237-313)||(12611537-12611613)
chr8 (248-300)||(16917199-16917251)
chr8 (369-409)||(30456535-30456575)
chr8 (244-300)||(30748472-30748528)
chr8 (256-312)||(41444549-41444605)
chr8 (244-312)||(45419240-45419308)
chr8 (245-312)||(2776441-2776508)
chr8 (349-404)||(28300416-28300471)
chr8 (350-409)||(36143287-36143346)
chr8 (245-308)||(36545156-36545219)
chr8 (249-312)||(36565457-36565520)
chr8 (135-177)||(16917293-16917335)
chr8 (350-400)||(36069570-36069620)
chr8 (371-409)||(36545065-36545103)
chr8 (375-409)||(39760754-39760788)
chr8 (244-312)||(36395160-36395229)
chr8 (247-312)||(40813327-40813392)
chr8 (244-312)||(43904876-43904947)
chr8 (244-300)||(17491832-17491888)
chr8 (244-312)||(36143368-36143436)
chr8 (244-312)||(39946860-39946928)
chr8 (244-312)||(44681250-44681318)
[»] chr5 (32 HSPs)
chr5 (237-312)||(33667219-33667294)
chr5 (245-312)||(31636132-31636199)
chr5 (242-312)||(28676598-28676668)
chr5 (202-300)||(42199301-42199399)
chr5 (246-312)||(43558040-43558106)
chr5 (244-312)||(43475243-43475311)
chr5 (245-312)||(4496387-4496454)
chr5 (349-404)||(21952274-21952329)
chr5 (244-312)||(41833793-41833863)
chr5 (246-312)||(1287792-1287858)
chr5 (247-312)||(1275267-1275332)
chr5 (247-312)||(15489706-15489771)
chr5 (244-312)||(18351118-18351187)
chr5 (236-312)||(2712947-2713023)
chr5 (244-312)||(34273030-34273098)
chr5 (245-312)||(14665717-14665784)
chr5 (245-312)||(16347590-16347657)
chr5 (245-312)||(24178513-24178580)
chr5 (245-312)||(28977071-28977138)
chr5 (245-312)||(38684970-38685037)
chr5 (262-312)||(14667766-14667816)
chr5 (133-194)||(3775195-3775256)
chr5 (237-294)||(6889014-6889071)
chr5 (349-386)||(8492627-8492664)
chr5 (236-313)||(14749309-14749386)
chr5 (264-312)||(27896-27944)
chr5 (244-312)||(79516-79584)
chr5 (236-312)||(6859384-6859460)
chr5 (245-305)||(12492596-12492656)
chr5 (251-303)||(21193858-21193910)
chr5 (371-407)||(27998343-27998379)
chr5 (246-294)||(38578734-38578782)
[»] chr2 (30 HSPs)
chr2 (238-312)||(8180783-8180857)
chr2 (246-304)||(13240958-13241016)
chr2 (244-312)||(12141547-12141615)
chr2 (256-312)||(19024183-19024239)
chr2 (245-312)||(43238305-43238372)
chr2 (238-312)||(25834684-25834758)
chr2 (263-312)||(18958910-18958959)
chr2 (236-285)||(42543265-42543314)
chr2 (349-409)||(7825276-7825336)
chr2 (349-401)||(9556672-9556724)
chr2 (349-409)||(9647909-9647969)
chr2 (244-312)||(43752158-43752226)
chr2 (245-312)||(11992320-11992387)
chr2 (245-312)||(36183454-36183521)
chr2 (246-312)||(38434954-38435021)
chr2 (245-312)||(38452897-38452964)
chr2 (245-312)||(45367837-45367904)
chr2 (246-312)||(2610591-2610657)
chr2 (244-294)||(3481162-3481212)
chr2 (371-409)||(8180698-8180736)
chr2 (246-307)||(14197375-14197437)
chr2 (246-291)||(9556582-9556627)
chr2 (259-312)||(11412724-11412777)
chr2 (244-292)||(12026216-12026264)
chr2 (349-405)||(12734623-12734679)
chr2 (349-400)||(37393470-37393522)
chr2 (244-308)||(41763253-41763317)
chr2 (349-409)||(41779610-41779670)
chr2 (349-409)||(42092437-42092497)
chr2 (349-405)||(45077670-45077726)
[»] chr6 (18 HSPs)
chr6 (244-312)||(33084061-33084129)
chr6 (244-312)||(14389379-14389446)
chr6 (246-300)||(9593919-9593973)
chr6 (141-195)||(21870201-21870255)
chr6 (133-195)||(31818623-31818685)
chr6 (256-292)||(33997765-33997801)
chr6 (245-312)||(5258360-5258427)
chr6 (354-409)||(6293678-6293733)
chr6 (244-307)||(24665818-24665881)
chr6 (245-312)||(28085379-28085446)
chr6 (372-406)||(5129164-5129198)
chr6 (371-409)||(32755837-32755875)
chr6 (247-312)||(2079343-2079408)
chr6 (251-300)||(4948529-4948578)
chr6 (251-300)||(4955500-4955549)
chr6 (256-312)||(8364575-8364631)
chr6 (373-405)||(26291700-26291732)
chr6 (349-409)||(33998308-33998368)
[»] scaffold0325 (1 HSPs)
scaffold0325 (247-311)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (245-312)||(1160-1227)


Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 36868192 - 36868512
Alignment:
Q  1 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868192 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 36868291  T
Q  101 gattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctactatttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868292 gattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctactatttt 36868391  T
Q  201 aactactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  36868392 aactactgtccatattatctactatccttacggctgaatccaaaggtcttctttatatatgcccaaaccacctaagcctactttccaccatcttctctac 36868491  T
Q  301 cataggtgctacataccccaa 321  Q
    |||||||||||||||||||||    
T  36868492 cataggtgctacataccccaa 36868512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36851691 - 36851794
Alignment:
Q  1 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 100  Q
    |||||||||| ||||||||||||||||| || ||||||| |||||||||||| ||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  36851691 agaggaactccttgccatggcaaagggacatcaactcaagaaaggtttgctt-cttgatgatcgaaatcacaatttgtggagattttgcatgcttgactt 36851789  T
Q  101 gatta 105  Q
    |||||    
T  36851790 gatta 36851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 36868558 - 36868626
Alignment:
Q  341 atgatattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36868558 atgatattatttctaatcatatctcgcctggtcttaccacaaattcaacacaacatcctcatctctgct 36868626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37371307 - 37371192
Alignment:
Q  1 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 100  Q
    |||||||||| ||||||||||||||||| || || |||| |||||||||||| ||||||||||||||| ||  |||||| ||||||||||| ||||| ||    
T  37371307 agaggaactccttgccatggcaaagggaaatcaagtcaagaaaggtttgctt-cttaatgatctaaattacagtttgtgtagattttgcatgcttgaatt 37371209  T
Q  101 gattaacttgttttatt 117  Q
    | |||  ||||||||||    
T  37371208 ggttactttgttttatt 37371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36862143 - 36862258
Alignment:
Q  1 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 100  Q
    ||||||||||  |||||||| |||| ||||| ||||||| |||||||||||| ||| |||||||||||||| ||  ||||| | | ||||| ||||||||    
T  36862143 agaggaactccgtgccatgggaaagcgagatcaactcaagaaaggtttgctt-ctttatgatctaaatcacaatgcgtggacactatgcatgcttgactt 36862241  T
Q  101 gattaacttgttttatt 117  Q
    |||||  ||||||||||    
T  36862242 gattactttgttttatt 36862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 50960844 - 50960912
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 50960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 21200661 - 21200553
Alignment:
Q  202 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctacc 301  Q
    |||||| ||||| | ||||||| ||||||| || ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||     
T  21200661 actactctccatgtgatctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac- 21200563  T
Q  302 ataggtgctac 312  Q
     ||||||||||    
T  21200562 -taggtgctac 21200553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 49503766 - 49503833
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 49503833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 39600892 - 39600960
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||||||| ||||| |||||| ||||    
T  39600892 aggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactac 39600960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 54128449 - 54128381
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  54128449 aggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 54128381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 52138871 - 52138803
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52138871 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52138803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 39235209 - 39235154
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 299  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||    
T  39235209 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 26490392 - 26490318
Alignment:
Q  238 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| |||||| | | |||||| ||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  26490392 atccaacggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctac 26490318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 29817563 - 29817506
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 313  Q
    |||||| ||||||||||||| ||||||||| || ||||| ||||| ||||||||||||    
T  29817563 tacatgtccaaaccacctaaacttactttctacaatcttttctactataggtgctaca 29817506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 41842725 - 41842790
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||| |||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  41842725 tcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctac 41842790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 27917546 - 27917490
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||| |||||| || | |||||||| ||| ||||||||||||||||||||||||    
T  27917546 ctaatcaaatctcgtctaggcttaccactcatccaacacaacatcctcatctctgct 27917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 29919282 - 29919226
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29919282 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29919226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 29928586 - 29928642
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29928586 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 29968435 - 29968379
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29968435 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 29977740 - 29977796
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29977740 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29977796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 38430919 - 38430851
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| ||||| ||||||||||| | |||||||| || |||| |||||||| ||||| |||||||||||    
T  38430919 aggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgctac 38430851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 42510227 - 42510292
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 311  Q
    ||||||||||||  |||| ||||||||||||||| || ||||||| ||||| ||||| ||||||||||    
T  42510227 aggtcttctcta--catgtccaaaccacctaagcctattttccactatcttttctactataggtgcta 42510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 43694976 - 43695044
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||||||||||| ||||||  | |||| |||| ||| ||||| |||||||||||    
T  43694976 aggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctac 43695044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 49841589 - 49841529
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| || |||| || ||||||| |||||| ||||||||||||||||||| ||||    
T  49841589 atttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatctatgct 49841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 5168902 - 5168835
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||  ||||||| |||||| || |||| |||| ||| |||||||||||||||||    
T  5168902 ggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctac 5168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 36820173 - 36820240
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| | ||||||||||||| || |||||||||||||  |||  |||||||||||    
T  36820173 ggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctac 36820240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 406
Target Start/End: Complemental strand, 44395381 - 44395346
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctct 406  Q
    |||||||||||||||||||||||| |||||||||||    
T  44395381 gtcttaccacacattcaacacaacttcctcatctct 44395346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 45289307 - 45289358
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    |||||| ||| |||||||||||||||||| || ||||||||||||| |||||    
T  45289307 ttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctac 45289358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 47233808 - 47233875
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  47233808 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 47233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 3987116 - 3987054
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||| ||||| |||||||||||||||  || |||| |||||||| ||||| |||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtg 3987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 19737068 - 19737002
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| |||||||||    
T  19737068 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgct 19737002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 19757971 - 19757905
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| |||||||||    
T  19757971 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgct 19757905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 46568072 - 46568034
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  46568072 gtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 48734349 - 48734395
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatct 293  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatct 48734395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 49841688 - 49841622
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||| ||||||||||||| ||  || ||||||||||||| ||||  |||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctac 49841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 54365194 - 54365255
Alignment:
Q  250 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| |||||||||||||||||||||| || ||||| |||| || ||||| |||||||||||    
T  54365194 tctctctacatgcccaaaccacctaagc-tattttccgccatattttctactataggtgctac 54365255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 40562520 - 40562573
Alignment:
Q  352 tctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||| |||||| ||| || ||||||||||||||| ||||||||||| |||||||    
T  40562520 tctattcatatttcgtctagtcttaccacacatttaacacaacatcgtcatctc 40562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 51447924 - 51447989
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  51447924 tcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctac 51447989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 26490291 - 26490239
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    ||||||||||| || || |||||||||| ||| |||| |||||||||||||||    
T  26490291 ctaatcatatcccgtcttgtcttaccactcatccaacgcaacatcctcatctc 26490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 34719303 - 34719351
Alignment:
Q  264 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||||| | ||||||||||||||| ||||| |||||||||||    
T  34719303 caaaacacctaagttgactttccaccatcttttctacgataggtgctac 34719351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 36820263 - 36820323
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||| ||| |||| ||||    
T  36820263 atttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatctttgct 36820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 38060502 - 38060434
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  38060502 aggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctac 38060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 45236834 - 45236778
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||    
T  45236834 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 45236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 45728124 - 45728064
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||| ||| || |||||||||| ||| || | |||||||||||||||||||    
T  45728124 atttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 29398889 - 29398822
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 311  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  29398889 aggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 31459098 - 31459033
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 31459033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 42285903 - 42285972
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 305  Q
    ||||||| |||||||||||||||||||||||||||||||||  || |||| |||||||| ||||| ||||    
T  42285903 gaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 46715576 - 46715649
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    |||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||    
T  46715576 aatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 35555850 - 35555926
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||||||||||| || ||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  35555850 gaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 35555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 51252664 - 51252740
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| | |||||||||    
T  51252664 gaatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctac 51252740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 50662457 - 50662394
Alignment:
Q  246 gtcttctctatacatgcccaaa-ccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  50662457 gtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 28236252 - 28236186
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||||| || ||||||||| ||| ||||| |||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctac 28236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 54470276 - 54470210
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||||||||||||||| ||||  || ||||||||||||| ||||| |||||||||||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctac 54470210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 42639223 - 42639296
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 309  Q
    ||||||| | ||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||||| ||||||||    
T  42639223 gaatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 47611798 - 47611742
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||||| |||||||||||||||||||||| || |||||| |||||| |||||    
T  47611798 aggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 31339634 - 31339540
Alignment:
Q  217 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||||||  |  |||| | | ||||||||| ||||||| ||||||||||||||||| |||| ||||| || |||||||||||| ||||    
T  31339634 atctactatccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctac 31339540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 31960026 - 31960093
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31960026 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31960093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 43433994 - 43433927
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43433994 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43433927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 52569727 - 52569794
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52569727 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 53707864 - 53707797
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  53707864 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 53707797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 38570950 - 38571024
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    ||||||| | ||||||| | |||||||||||||||||||||| || ||||||| ||||| | ||| |||||||||    
T  38570950 gaatccacatgtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgct 38571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 30853426 - 30853373
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 299  Q
    ||||||||| ||||||||||||||||||||||| | ||||||| ||||| ||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttccactatcttgtcta 30853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 436300 - 436232
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  436300 aggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 436232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 20105775 - 20105831
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||||||| || |||||||||||||| || | ||||||| |||||||    
T  20105775 atttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctc 20105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 33710003 - 33709931
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||| || ||||||||  ||||||| ||||||||||| | || ||||||||||||| ||||| |||||||    
T  33710003 gaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtg 33709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 38266197 - 38266149
Alignment:
Q  264 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  38266197 caaaccacctaagcttagtttccaccatcctctctattataggtgctac 38266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 41192907 - 41192839
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||| |||| ||||||||  || ||||||||||||| |||||  ||||||||||    
T  41192907 aggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctac 41192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 44860914 - 44860862
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 299  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||| ||||    
T  44860914 tcttctctatacatgcccaaaccatctaagcctggtttccaccatcttttcta 44860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 49987406 - 49987346
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||||  | || ||||||| | |||||||||||||||||||||||||||||    
T  49987406 atttctaatcctatcatgtctagtcttactaaacattcaacacaacatcctcatctctgct 49987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 49987487 - 49987435
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactataggtg 49987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 50471597 - 50471541
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||||| |||||||||||||||| ||| | || ||||||||||||| |||||    
T  50471597 aggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctac 50471541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 33227279 - 33227212
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  33227279 ggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctac 33227212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 48622755 - 48622822
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| || ||||||||    
T  48622755 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctac 48622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 1793529 - 1793463
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||||| |||||||| ||||||||| |||| |||| ||| | ||| |||||||||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctac 1793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 20591513 - 20591579
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||| |||| |||| |||| ||| ||||| ||| |||||||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctac 20591579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 28497558 - 28497493
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||||||||||||||||||||| |  ||||||| ||||| ||||| | |||||||||    
T  28497558 gtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtgctac 28497493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 44860810 - 44860772
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  44860810 gtcttaccacacatccaacacaacatcctcatttctgct 44860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 4440923 - 4440858
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    |||||||||| || |||||||||||| |||||| || |||| |||| ||| ||||| |||||||||    
T  4440923 ggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 4440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 30621418 - 30621483
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||| |||||||| ||||||| | || ||||||||||||| ||||| ||| |||||||    
T  30621418 tcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgctac 30621483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 37797920 - 37797855
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  37797920 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 37797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 404
Target Start/End: Original strand, 40933222 - 40933255
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatct 404  Q
    ||||||||||||||||||| ||||||||||||||    
T  40933222 gtcttaccacacattcaacgcaacatcctcatct 40933255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 10209105 - 10209037
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||  ||||||||||||||| ||||| ||| ||||  ||||||| ||||| |||||| ||||    
T  10209105 aggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctac 10209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 13805469 - 13805509
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagc 277  Q
    |||| ||||||||||||| ||||| ||||||||||||||||    
T  13805469 aatctaaaggtcttctctctacatacccaaaccacctaagc 13805509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 31403229 - 31403295
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||| ||||||||||| |||||||||| || |||||||||| || ||||| |||||||||||    
T  31403229 aggtgttctctttacatgcccaa-ccacctaagcctagtttccaccat-ttttctactataggtgctac 31403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 31403324 - 31403384
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| |||| || ||  ||| |||||||||||||| ||||||| |||||||||||    
T  31403324 atttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatcatctctgct 31403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 42293472 - 42293528
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| ||||||||||||||||  | |||||| |||||| ||||| |||||||||||    
T  42293472 tacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 44641936 - 44641996
Alignment:
Q  135 tatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 195  Q
    ||||| ||||| | ||||||||||  |||||||||||| |||||||||||| | |||||||    
T  44641936 tatagtttttcgaagtcttcttctgtctttagtgatttgactactctccatttgatctact 44641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 44686700 - 44686744
Alignment:
Q  135 tatagcttttcaaggtcttcttctacctttagtgatttaactact 179  Q
    ||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  44686700 tatagtttttcgaggtcttcttctgcctctagtgatttaactact 44686744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 45205156 - 45205208
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||| |||| || || |||||||||| ||| ||||||||||||||||||||    
T  45205156 ctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctc 45205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 56375264 - 56375208
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  56375264 ctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 56375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 44078 - 44147
Alignment:
Q  243 aaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||| |||||||||||||||||||||| || ||||| ||||||| ||||| |||||||||||    
T  44078 aaggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctac 44147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 31538 - 31471
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31538 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17615760 - 17615648
Alignment:
Q  1 agaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatccttgactt 100  Q
    |||||||||| ||||||||| ||||||| || |  |||| ||||||||||||| ||||||||||||||||| ||||||| ||||||| ||| ||||| ||    
T  17615760 agaggaactccttgccatggaaaagggaaatcatgtcaagaaaggtttgcttc-ttaatgatctaaatcacaatttgtgtagatttttcatgcttgaatt 17615662  T
Q  101 gattaacttgtttt 114  Q
    | |||  |||||||    
T  17615661 ggttactttgtttt 17615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 12966092 - 12966025
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||| ||| | |||||||||||    
T  12966092 ggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 7189442 - 7189502
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 309  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgc 7189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 42187537 - 42187473
Alignment:
Q  248 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  42187537 cttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctac 42187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 38920859 - 38920797
Alignment:
Q  250 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||| ||||| |||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctac 38920797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 40169718 - 40169652
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| ||| |||||||||||||||||||||| || ||||||||||||| ||||| ||| |||||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctac 40169652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 41948594 - 41948532
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 299  Q
    |||||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||    
T  41948594 aatccagaggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 47848743 - 47848677
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||  ||||||||||||||||||||| || ||||||||||||| ||||| ||||| |||||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctac 47848677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 27021906 - 27021971
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| |||||||||||||||||||||| || ||| ||||| ||| ||||| |||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctac 27021971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 28021032 - 28020967
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| ||| |||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctac 28020967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 19262644 - 19262712
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||| ||||||||||||||  | |||| |||||||| ||||| |||||||||||    
T  19262644 aggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctac 19262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 30200263 - 30200323
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||||||| |  ||  ||||||||||||| ||||||||||||||||||||||||    
T  30200263 atttctaatcatatcccatctaatcttaccacacatccaacacaacatcctcatctctgct 30200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 36101976 - 36102044
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||| |||||||||||||||| || |||||| |||||| ||||  |||||||||||    
T  36101976 aggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctac 36102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 36514410 - 36514486
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| | ||| ||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  36514410 gaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 36514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 12841487 - 12841554
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12841487 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12841554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 13859220 - 13859287
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  13859220 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 13859287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 34869490 - 34869423
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  34869490 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 34869423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 35906413 - 35906480
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  35906413 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 35906480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 49029346 - 49029279
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  49029346 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 49029279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 5335878 - 5335840
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5335878 gtcttaccacacattcaacgcaacatcctcatctctgct 5335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 2885936 - 2886001
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  2885936 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 2886001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 24549905 - 24549954
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    |||||||||| |||||||||||||||||||||| || |||||| ||||||    
T  24549905 ggtcttctctctacatgcccaaaccacctaagcctagtttccatcatctt 24549954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 35713764 - 35713719
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 291  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccat 35713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 6420703 - 6420747
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccacca 290  Q
    ||||||||| |||||||||||||||||||||| || |||||||||    
T  6420703 gtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 7273110 - 7273046
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  7273110 aggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 28628144 - 28628212
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||| ||||||||||||||||||||||  | ||||||||||| | |||||  ||||||||||    
T  28628144 aggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctac 28628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 30200174 - 30200238
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||| | |||||||| ||| ||||||||| || ||||||||||||| ||||| |||||||    
T  30200174 aggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtg 30200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 6374938 - 6374871
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  6374938 ggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctac 6374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 309  Q
    ||||||||| ||||||||||||||||||||||  | |||| | |||||| ||||| ||||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 11594030 - 11593963
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  11594030 ggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctac 11593963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 22349690 - 22349623
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||| |||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22349690 ggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 31005293 - 31005226
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  31005293 ggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 31005226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 33073022 - 33072955
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  33073022 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 33072955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 39906582 - 39906649
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  39906582 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 39906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 43281744 - 43281677
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43281744 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 45836692 - 45836759
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  45836692 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 45836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 46990001 - 46989906
Alignment:
Q  217 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||| ||  |||| | |||||| ||| | |||||||||||||||||||| | |  ||| |||||||| ||||| |||||||||||    
T  46990001 atctactatctttactgcgaaatctataggtctcctccacacatgcccaaaccacctaagatgaaattcaaccatcttttctacaataggtgctac 46989906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 14593717 - 14593679
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  14593717 gtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 16013240 - 16013202
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  16013240 gtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 18605359 - 18605425
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18605359 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18605425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 18637631 - 18637565
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18637631 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18637565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 18651065 - 18650999
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18651065 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18650999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Original strand, 24550013 - 24550051
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  24550013 gtcttacaacacatccaacacaacatcctcatctctgct 24550051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 25579290 - 25579356
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||| |||||||||||||||| || |||||||||| || ||| | || ||||||||    
T  25579290 gtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctac 25579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Original strand, 36514531 - 36514569
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  36514531 gtcttaccacacatccaacgcaacatcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Original strand, 36869615 - 36869653
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  36869615 gtcttaccactcatccaacacaacatcctcatctctgct 36869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 40139221 - 40139279
Alignment:
Q  350 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgc 408  Q
    ||||||||| |||| || || |||||||||||||| | ||||||||||||| |||||||    
T  40139221 tttctaatcttatcccgtctagtcttaccacacatcccacacaacatcctcgtctctgc 40139279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 43282477 - 43282411
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||||||||||  ||||||||| || ||||||||  ||| ||||| |||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctac 43282411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 44855384 - 44855446
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 307  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||||    
T  44855384 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggt 44855446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 46356069 - 46356135
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  46356069 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 46356135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 47848630 - 47848596
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||||||| ||||||||||||||||||||    
T  47848630 gtcttaccacacatccaacacaacatcctcatctc 47848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 38135424 - 38135473
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    |||||||| | |||||| ||||||||||||||| || |||||||||||||    
T  38135424 ggtcttctgtctacatgtccaaaccacctaagcctattttccaccatctt 38135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 48202879 - 48202960
Alignment:
Q  210 ccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccat 291  Q
    |||||| ||||||| |||||||  | ||||| | | ||||||||| ||||||| |||||||||||||| ||  |||||||||    
T  48202879 ccatatgatctactctccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 402
Target Start/End: Original strand, 48736203 - 48736256
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcat 402  Q
    |||||||||  ||||||  || ||||||||||||||||||| ||||||||||||    
T  48736203 atttctaattttatctcatctagtcttaccacacattcaacgcaacatcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 1740775 - 1740715
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| || | | ||| ||||||| |||||| |||| |||||||||||||||||||    
T  1740775 atttctaatcttaccccacctagtcttactacacatccaacgcaacatcctcatctctgct 1740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 5335999 - 5335923
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| || |||||||| || ||||||||||||||||||  || |||| ||||||||  |||| |||| ||||||    
T  5335999 gaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctac 5335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 14593844 - 14593772
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||| ||||||||||  |||||||||||| ||||||||  || |||| ||||| || ||||| |||||||    
T  14593844 gaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 26742127 - 26742175
Alignment:
Q  264 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  26742127 caaaccacctaatcctattttccaccatcttttctactataggtgctac 26742175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 33350018 - 33350082
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 309  Q
    |||||||||| ||||||||||||||| |||||| || |||| | || ||| ||||| ||||||||    
T  33350018 ggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgc 33350082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 36136835 - 36136767
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||| || |||||||||| |||||||  || |||| |||||||| ||||| |||||||||||    
T  36136835 aggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctac 36136767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 37617918 - 37617862
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  37617918 ctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 37618015 - 37617947
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagctta-ctttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| ||  |||| |||| ||| ||||| |||||||||||    
T  37618015 ggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctac 37617947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 40830294 - 40830226
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| | |||||||||||||||||||   | |||| |||||||| ||| | |||||||||||    
T  40830294 aggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctac 40830226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 42187448 - 42187393
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    ||||||||| ||||| || || ||||||| |||||| ||||||||||||||||||||    
T  42187448 atttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctc 42187393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 5338795 - 5338727
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  5338795 aggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 27848016 - 27848084
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  27848016 aggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctac 27848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 48431619 - 48431685
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||| ||||| |||||    
T  48431619 gtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctac 48431685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 35828761 - 35828829
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||| | ||||||||||||| | || ||||||||||||| |||||||||||||||||    
T  35828761 aggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 34792561 - 34792628
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| ||||||| |||| ||| ||||| |||||||||||    
T  34792561 ggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctac 34792628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 43423788 - 43423726
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  43423788 gtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtg 43423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 14226047 - 14226108
Alignment:
Q  251 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  14226047 ctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 40416439 - 40416374
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| |||||||| ||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  40416439 tcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 1661501 - 1661433
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||| ||||||| || ||| || ||||||||||||| ||||| |||||||||||    
T  1661501 aggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctac 1661433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 2544670 - 2544602
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| ||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  2544670 aggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctac 2544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 3819059 - 3819135
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| | ||||||| | |||||||||||||||| ||||  || || |||||||||| |||||||||||||||||    
T  3819059 gaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctac 3819135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 4379983 - 4379927
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    ||||||||||||||||   || |||||||||||||| ||||||||||||||||||||    
T  4379983 atttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctc 4379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 9599702 - 9599758
Alignment:
Q  353 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||| || || |||||||||| ||| ||||||||||||||||||||||||    
T  9599702 ctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 52442808 - 52442868
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||||| | || |||||||||||||| ||||||||||||||||| ||||||    
T  52442808 atttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgct 52442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 1210815 - 1210748
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1210815 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 8343062 - 8343125
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    |||||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||| |||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctac 8343125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 9509388 - 9509321
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||| |||||||| || |||  |||||||| ||||| |||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctac 9509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 38868948 - 38868885
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| ||||||||||||||||||||||  | ||||||||||||| ||||  |||||||||||    
T  38868948 ttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 51602126 - 51602059
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  51602126 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 51602059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 13827928 - 13827994
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    ||||||||||| ||||||  |||||||||||| | || ||||||||||||| ||||| |||||||||    
T  13827928 aggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgct 13827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 8671986 - 8671921
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  8671986 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 8671921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 9509296 - 9509236
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||||  | || |||||| ||| ||| ||||||||||||||||||||||||    
T  9509296 atttctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgct 9509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 32404737 - 32404801
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||||| |||||  ||||||||||||||| || ||||||||||||| | ||| |||||||    
T  32404737 aggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 34827406 - 34827462
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||| ||| ||| || |||||||||| ||| ||||||||||||||||||||    
T  34827406 atttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 15086004 - 15085937
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  15086004 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 15085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 22090166 - 22090099
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||  ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22090166 ggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 22090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 23791848 - 23791923
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||| | || |||||||| |||||||| ||| ||||    
T  23791848 aatccacatgtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctaccatgggtcctac 23791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 26016418 - 26016355
Alignment:
Q  346 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||| |||| |||||  | || |||||||||||||| |||| |||||||||||||||||||    
T  26016418 attatttataattatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgct 26016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 39140590 - 39140523
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||||||||||  | |||   ||||||| ||||| |||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctac 39140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 51440977 - 51441040
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  51440977 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 51441040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 10569278 - 10569328
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    ||||||||||| ||||||||||||||||||||||  | ||| |||||||||    
T  10569278 aggtcttctctctacatgcccaaaccacctaagccaagttttcaccatctt 10569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 32231167 - 32231233
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||||| || |||| ||||  || ||||| |||||||||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctac 32231233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 4380081 - 4380016
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||   ||||||||||| |||| ||||||||||||| ||||| |||| ||||||    
T  4380081 tcttctctctacatgtataaaccacctaaccttagtttccaccatcttttctactatagttgctac 4380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 36340014 - 36340083
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 313  Q
    ||||||||||| | |||| | ||||||||||| | || ||||||||||||| ||||  ||||||||||||    
T  36340014 aggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatataggtgctaca 36340083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 1661404 - 1661344
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| |||| |  || |||||| || ||||||||||||||||| |||||||||||    
T  1661404 atttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgct 1661344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 16822233 - 16822289
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||||| |||||| |||||||||||||||  | |||| |||||||| |||||    
T  16822233 aggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 17815537 - 17815493
Alignment:
Q  250 tctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    ||||| ||||||||||||||| |||||| || |||||||||||||    
T  17815537 tctctctacatgcccaaaccaactaagcctagtttccaccatctt 17815493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 19908250 - 19908318
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||| |||||| |||||||||||| ||||||| |||  ||||| ||||||| | ||| |||||||||||    
T  19908250 aggttttctctctacatgcccaaatcacctaaacttggtttcccccatcttttttactataggtgctac 19908318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 51812591 - 51812535
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 305  Q
    |||||| |||||||||||| ||| ||||| || ||||||||||||| ||||| ||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatag 51812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 29700374 - 29700279
Alignment:
Q  217 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| |||||||  | |||||||| |||||| ||| || |||||||||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  29700374 atctactctccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctac 29700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 9695698 - 9695634
Alignment:
Q  248 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| |||||||||||    
T  9695698 cttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctac 9695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 35643814 - 35643868
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctac 35643868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 13171865 - 13171926
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 310  Q
    |||||| || ||||||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  13171865 ttctctttatatgcccaaaccacctaagcatattttccaccatcttttctactataggtgct 13171926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 45512709 - 45512774
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| || |||||||||||| ||||||||| |||||| |||||| ||||| |||||||||||    
T  45512709 tcttctctttatatgcccaaaccatctaagcttattttccatcatcttttctactataggtgctac 45512774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 12491350 - 12491417
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12491350 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12491417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 18474173 - 18474239
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||| ||||||| |||||| || ||||||||||| | ||||| |||||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctac 18474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 41971991 - 41972045
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||||| |||||    
T  41971991 gtcttctctctacatgtccaaaccacctaaacttattttccaccatcttttctac 41972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 79114 - 79081
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagc 277  Q
    ||||||||||||||||||||||||||||||||||    
T  79114 aggtcttctctatacatgcccaaaccacctaagc 79081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 12611613 - 12611537
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 313  Q
    |||||| |||| |||| | ||||| | |||||||||||||| || ||||||||||||| |||||  |||||||||||    
T  12611613 aatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctactttaggtgctaca 12611537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 16917251 - 16917199
Alignment:
Q  248 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||| |||||||||||||||||||||| || ||| ||||||||| |||||    
T  16917251 cttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctac 16917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 30456535 - 30456575
Alignment:
Q  369 tggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  30456535 tggtcttaccacacatccaacgcaacatcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 30748528 - 30748472
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||||| |||||||||||||||||||||| |   |||||||||||| |||||    
T  30748528 aggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctac 30748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 41444549 - 41444605
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| ||||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  41444549 tacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctac 41444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 45419308 - 45419240
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||| |||||||||||||||||||||  || |||  |||||||| ||||| |||||||||||    
T  45419308 aggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctac 45419240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 2776441 - 2776508
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||| | ||||| |||||||||||    
T  2776441 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 2776508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 28300416 - 28300471
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 404  Q
    |||||||||| ||||||  || ||||||| |||||| |||||||||||||||||||    
T  28300416 atttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatct 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 36143346 - 36143287
Alignment:
Q  350 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||| ||||||  || ||||||||||||   ||||||||||||||||||||||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgct 36143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 36545219 - 36545156
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  36545219 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 36545156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 36565457 - 36565520
Alignment:
Q  249 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 36565520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 16917335 - 16917293
Alignment:
Q  135 tatagcttttcaaggtcttcttctacctttagtgatttaacta 177  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||    
T  16917335 tatagcttttctaggtcttcttctacctgtagtgatttgacta 16917293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 36069620 - 36069570
Alignment:
Q  350 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctc 400  Q
    ||||||||| |||| || || |||||||||||||| |||||||||||||||    
T  36069620 tttctaatcttatcccgtctagtcttaccacacatccaacacaacatcctc 36069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 36545103 - 36545065
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  36545103 gtcttaccactcatccaacacaacatcctcatctctgct 36545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 39760754 - 39760788
Alignment:
Q  375 taccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||||||||||||||||||||||||    
T  39760754 taccacacatccaacacaacatcctcatctctgct 39760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 36395160 - 36395229
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||||||||||| || |||| || |||| |||| ||| ||||| |||||||||||    
T  36395160 aggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctac 36395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 40813392 - 40813327
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  40813392 tcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 40813327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 43904876 - 43904947
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagc---ttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| |||||||||||||||   ||| ||||| ||||||| ||||| |||| ||||||    
T  43904876 aggtcttctctctacatgtccaaaccacctaagcttattattttcctccatcttttctactatagatgctac 43904947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 17491832 - 17491888
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||||| ||||| ||||||||||||||| ||| | |||||||| || |||||    
T  17491832 aggtcttctctctacatacccaaaccacctaagtttattgtccaccatattttctac 17491888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 36143436 - 36143368
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||| || ||||||||||||||||||  || ||||||||||||  ||| | |||||||||||    
T  36143436 aggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctac 36143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 39946928 - 39946860
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| | |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  39946928 aggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 39946860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 44681250 - 44681318
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| || ||  |||||||  ||||||||| ||||||||||||| ||||  |||||||||||    
T  44681250 aggtcttctctctagatttccaaaccttctaagcttattttccaccatcttttctattataggtgctac 44681318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 33667294 - 33667219
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| ||||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  33667294 aatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 33667219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 31636132 - 31636199
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 31636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 28676668 - 28676598
Alignment:
Q  242 aaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||||| |||||||| ||||||||||||  || ||||||||||||| ||||| |||| ||||||    
T  28676668 aaaggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctac 28676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 42199399 - 42199301
Alignment:
Q  202 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    |||||| ||||| | ||||||| |||||||  | ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||    
T  42199399 actactctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac 42199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 43558040 - 43558106
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctac 43558106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 43475311 - 43475243
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |  || |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  43475311 aggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 4496454 - 4496387
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  4496454 ggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctac 4496387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 21952329 - 21952274
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 404  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||    
T  21952329 atttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 41833793 - 41833863
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc--ttctctaccataggtgctac 312  Q
    ||||||| ||| |||||||||||||||||||||| ||  ||||||||||  |||| |||||||||||||||    
T  41833793 aggtcttgtctctacatgcccaaaccacctaagcatatgttccaccatcttttctataccataggtgctac 41833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 1287792 - 1287858
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1287792 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1287858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 1275332 - 1275267
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1275267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 15489706 - 15489771
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||||||||||||| ||||||| | |||| |||||||| ||||| |||||| ||||    
T  15489706 tcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactac 15489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 18351118 - 18351187
Alignment:
Q  244 aggtcttctctataca-tgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||| |||||||||||||||||| || |||| ||||| || ||||| |||||||||||    
T  18351118 aggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctac 18351187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 2713023 - 2712947
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| ||||||||||| |||||||||||||||||||||  || | || |||||||| |  || |||||||||||    
T  2713023 gaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctac 2712947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 34273098 - 34273030
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  34273098 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctac 34273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 14665784 - 14665717
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| | || ||||||||| |||||||||||    
T  14665784 ggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctac 14665717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 16347590 - 16347657
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  16347590 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 16347657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 24178580 - 24178513
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||  |||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  24178580 ggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 24178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 28977071 - 28977138
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28977071 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctac 28977138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 38685037 - 38684970
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  38685037 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 38684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 14667816 - 14667766
Alignment:
Q  262 cccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||||||  || ||||||||||||| ||||| |||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctac 14667766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 3775195 - 3775256
Alignment:
Q  133 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctac 194  Q
    ||||||| ||||| |||||||||||| ||| ||||||||| |||||| ||||| | ||||||    
T  3775195 cttatagtttttctaggtcttcttctgcctctagtgatttgactactatccatttaatctac 3775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 6889071 - 6889014
Alignment:
Q  237 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    |||||| | ||||||||| |||||| ||||||||| ||||| || |||||||||||||    
T  6889071 aatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatctt 6889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 386
Target Start/End: Original strand, 8492627 - 8492664
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattc 386  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  8492627 atttctaattatatctcgtctggtcttaccacacattc 8492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 14749386 - 14749309
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 313  Q
    ||||||| ||||||||||| |||||| |||||||| |||||  || |||| ||||  || ||||| ||||||||||||    
T  14749386 gaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctaca 14749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 27944 - 27896
Alignment:
Q  264 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||||| || |||||| |||||| ||||| |||||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctac 27896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 79584 - 79516
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| |||||||||||||   |  ||||||||||||| ||||| |||||| ||||    
T  79584 aggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactataggtactac 79516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 6859460 - 6859384
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||| | ||||||||| ||| || |||||||||||| || |  |||||||||||||||  || |||||||||||    
T  6859460 gaatccacaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctac 6859384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 12492596 - 12492656
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 305  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||    
T  12492596 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatag 12492656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 21193858 - 21193910
Alignment:
Q  251 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccat 303  Q
    |||| |||||||||||| ||||||||  || |||||||||| |||||||||||    
T  21193858 ctctctacatgcccaaatcacctaagtctagtttccaccatattctctaccat 21193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 27998379 - 27998343
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctg 407  Q
    |||||||||||||| |||| |||||||||||||||||    
T  27998379 gtcttaccacacatccaacgcaacatcctcatctctg 27998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 38578734 - 38578782
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| ||||||||    
T  38578734 gtcttctctttacatgctcaaaccacctaagtttagtttctaccatctt 38578782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 8180857 - 8180783
Alignment:
Q  238 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctac 8180783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 13240958 - 13241016
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccata 304  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  13240958 gtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttctaacata 13241016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 12141615 - 12141547
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| | ||| |||||||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  12141615 aggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctac 12141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 19024239 - 19024183
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||| |||||||||||||||||||||||||||||||| || |  |||||||||||    
T  19024239 tacatgtccaaaccacctaagcttactttccaccatcttttcaaatataggtgctac 19024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 43238305 - 43238372
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43238372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 25834758 - 25834684
Alignment:
Q  238 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||| ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 25834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 18958959 - 18958910
Alignment:
Q  263 ccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctac 18958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 42543314 - 42543265
Alignment:
Q  236 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttc 285  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  42543314 gaatccacaggtcttctctgtacatgcccaaaccacctaagtttagtttc 42543265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 7825336 - 7825276
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||||||    
T  7825336 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 9556672 - 9556724
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctca 401  Q
    ||||||||||||||| || ||  ||||||||||||| ||||||||||||||||    
T  9556672 atttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 9647909 - 9647969
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| |||| |  || |||||||||||||| |||| |||||||||||||||||||    
T  9647909 atttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgct 9647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 43752158 - 43752226
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| ||||| ||||||||| || |||| |||| ||| ||||| |||||||||||    
T  43752158 aggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctac 43752226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 11992320 - 11992387
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| || ||| |||||||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  11992320 ggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctac 11992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 36183521 - 36183454
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||| |||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  36183521 ggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctac 36183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 38435021 - 38434954
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagct-tactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||||| ||  | || ||||||||||||| ||||| |||||||||||    
T  38435021 gtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctac 38434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 38452897 - 38452964
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||| ||||||    
T  38452897 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctac 38452964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 45367837 - 45367904
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  45367837 ggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctac 45367904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 2610657 - 2610591
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| || || |||||||||||    
T  2610657 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctac 2610591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 3481212 - 3481162
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 294  Q
    ||||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  3481212 aggtcttctctctacatgtccaaaccacctaagcctgttttccaccatctt 3481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 8180736 - 8180698
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  8180736 gtcttaccactcatccaacacaacatcctcatctctgct 8180698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 14197375 - 14197437
Alignment:
Q  246 gtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggt 307  Q
    |||||| || |||||||||||||||||| |||| || ||||||||||||| ||||| ||||||    
T  14197375 gtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 9556582 - 9556627
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 291  Q
    ||||||||| |||||||| ||||||||||||| || ||||||||||    
T  9556582 gtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 11412777 - 11412724
Alignment:
Q  259 atgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||||| || |||||||||| || ||||| |||||||||||    
T  11412777 atgcccaaacaacctaagcctattttccaccatattttctactataggtgctac 11412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 12026216 - 12026264
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc 292  Q
    ||||||||||| ||||||  |||||||||||||| || |||||||||||    
T  12026216 aggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 12734679 - 12734623
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||| |||| || || |||||||||| ||| || |||||||||||||||||    
T  12734679 atttctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 37393470 - 37393522
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccaca-cattcaacacaacatcctc 400  Q
    |||||| ||||||||||  || ||||||||||| |||||||||||||||||||    
T  37393470 atttctgatcatatctcatctagtcttaccacaacattcaacacaacatcctc 37393522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 41763253 - 41763317
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 308  Q
    ||||||||||| | |||| ||||||||||||||| || |||| |||| ||| ||||| |||||||    
T  41763253 aggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtg 41763317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 41779610 - 41779670
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| |||| ||||| |||||| |||||||| ||  |||||| ||||||||||||    
T  41779610 atttctaatcctatcccgcctagtcttaacacacatttaatgcaacattctcatctctgct 41779670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 42092497 - 42092437
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||||||| || || ||||||| |||||| |||  ||||||| |||||||||||    
T  42092497 atttctaatcatatcccgtctagtcttactacacatccaatgcaacatcatcatctctgct 42092437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 45077726 - 45077670
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 405  Q
    |||||||||  ||||| | || |||||||||||||| |||| |||||||||||||||    
T  45077726 atttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctc 45077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 33084129 - 33084061
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| ||||| |||||||||||||||  || |||| |||||||| |||||||||||||||||    
T  33084129 aggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctac 33084061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 14389379 - 14389446
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    ||||||||||| |||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||||||    
T  14389379 aggtcttctctctacatgtccaaaccacctaag-tttgtttccaccatcttttctacgataggtgctac 14389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 9593919 - 9593973
Alignment:
Q  246 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||| |||||||||||||||||||||| || |||| |||||||| |||||    
T  9593919 gtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctac 9593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 21870201 - 21870255
Alignment:
Q  141 ttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 195  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||    
T  21870201 ttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctact 21870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 31818685 - 31818623
Alignment:
Q  133 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 195  Q
    ||||||| ||||| ||||||||| |||||||||||||| | ||||| |||||||| |||||||    
T  31818685 cttatagtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctact 31818623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 33997765 - 33997801
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatc 292  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33997765 tacatgcccaaaccacctaagcttagtttccaccatc 33997801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 5258360 - 5258427
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  5258360 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 5258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 6293678 - 6293733
Alignment:
Q  354 taatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    ||||||||||| | ||  | ||||||||||| ||||||||||||||||||||||||    
T  6293678 taatcatatctagtctaattttaccacacatccaacacaacatcctcatctctgct 6293733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 24665881 - 24665818
Alignment:
Q  244 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 307  Q
    ||||||||||| |||||| ||||||||||||||| || |||| ||||| || ||||| ||||||    
T  24665881 aggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 28085446 - 28085379
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28085446 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 28085379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 406
Target Start/End: Original strand, 5129164 - 5129198
Alignment:
Q  372 tcttaccacacattcaacacaacatcctcatctct 406  Q
    |||||||||||||||||| ||||||||||||||||    
T  5129164 tcttaccacacattcaacgcaacatcctcatctct 5129198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 32755875 - 32755837
Alignment:
Q  371 gtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  32755875 gtcttaccactcatccaacacaacatcctcatctctgct 32755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 2079408 - 2079343
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||| ||||| || ||||||| ||||| || ||||||||||||| ||||| |||| ||||||    
T  2079408 tcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctac 2079343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 4948529 - 4948578
Alignment:
Q  251 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4948529 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4948578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 4955500 - 4955549
Alignment:
Q  251 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 300  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4955500 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4955549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 8364631 - 8364575
Alignment:
Q  256 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||||||||||||||| || |||| |||| ||| ||||| |||| ||||||    
T  8364631 tacatgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctac 8364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 405
Target Start/End: Complemental strand, 26291732 - 26291700
Alignment:
Q  373 cttaccacacattcaacacaacatcctcatctc 405  Q
    ||||||||||||||||||||||||| |||||||    
T  26291732 cttaccacacattcaacacaacatcatcatctc 26291700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 33998308 - 33998368
Alignment:
Q  349 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 409  Q
    |||||||||| |||| |  || |||||||||||||| |||| ||||||| |||||||||||    
T  33998308 atttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgct 33998368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 11866 - 11802
Alignment:
Q  247 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 311  Q
    |||||||| ||||||||||||||||||||||  | || | |||||||| ||||| ||||||||||    
T  11866 tcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 1160 - 1227
Alignment:
Q  245 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 312  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1160 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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