View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9243_high_3 (Length: 644)

Name: NF9243_high_3
Description: NF9243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9243_high_3
NF9243_high_3
[»] chr7 (87 HSPs)
chr7 (181-631)||(11603369-11603819)
chr7 (1-165)||(19195213-19195376)
chr7 (1-164)||(31494051-31494214)
chr7 (1-167)||(21224351-21224515)
chr7 (1-173)||(20636760-20636931)
chr7 (1-165)||(42271473-42271637)
chr7 (1-173)||(19919595-19919766)
chr7 (1-166)||(48175960-48176126)
chr7 (1-142)||(41452271-41452412)
chr7 (4-165)||(2331157-2331323)
chr7 (1-154)||(3562443-3562596)
chr7 (1-165)||(11843177-11843341)
chr7 (1-165)||(27869195-27869358)
chr7 (1-164)||(35337523-35337685)
chr7 (1-164)||(10655470-10655632)
chr7 (1-162)||(13577789-13577949)
chr7 (1-166)||(24597515-24597678)
chr7 (11-174)||(8526946-8527108)
chr7 (1-94)||(36746573-36746666)
chr7 (1-144)||(17305905-17306049)
chr7 (1-165)||(39182075-39182238)
chr7 (1-168)||(10023782-10023947)
chr7 (1-167)||(19493460-19493623)
chr7 (1-168)||(24448041-24448206)
chr7 (1-164)||(15681771-15681934)
chr7 (1-93)||(4193691-4193783)
chr7 (1-94)||(5087137-5087230)
chr7 (106-174)||(48176208-48176276)
chr7 (1-72)||(14624743-14624814)
chr7 (1-124)||(18754306-18754429)
chr7 (106-164)||(36746749-36746806)
chr7 (5-166)||(26385406-26385567)
chr7 (106-166)||(20636617-20636677)
chr7 (106-166)||(20638489-20638549)
chr7 (1-162)||(26126395-26126555)
chr7 (16-84)||(33237493-33237561)
chr7 (106-173)||(24597761-24597828)
chr7 (3-97)||(39440186-39440281)
chr7 (106-164)||(19195459-19195517)
chr7 (106-163)||(2331015-2331072)
chr7 (1-94)||(6650651-6650744)
chr7 (1-94)||(9822170-9822262)
chr7 (1-94)||(10724095-10724187)
chr7 (106-167)||(21690413-21690474)
chr7 (3-67)||(38722900-38722965)
chr7 (106-166)||(19919847-19919907)
chr7 (15-174)||(3403042-3403200)
chr7 (4-95)||(7365367-7365458)
chr7 (15-94)||(15093821-15093900)
chr7 (1-94)||(5348168-5348262)
chr7 (106-164)||(10655330-10655388)
chr7 (106-164)||(17305764-17305822)
chr7 (109-167)||(21224601-21224659)
chr7 (106-167)||(18754512-18754573)
chr7 (1-94)||(24464717-24464810)
chr7 (106-174)||(27869441-27869509)
chr7 (1-173)||(42303288-42303459)
chr7 (1-72)||(3148065-3148135)
chr7 (106-165)||(6650543-6650602)
chr7 (106-161)||(7365224-7365279)
chr7 (5-64)||(23473135-23473194)
chr7 (106-165)||(25002951-25003010)
chr7 (106-165)||(31493910-31493969)
chr7 (26-68)||(1921041-1921083)
chr7 (3-64)||(9154398-9154460)
chr7 (6-67)||(46267343-46267405)
chr7 (6-60)||(47113261-47113315)
chr7 (109-154)||(5490924-5490969)
chr7 (106-167)||(13578030-13578091)
chr7 (3-64)||(23439737-23439798)
chr7 (113-174)||(23658764-23658825)
chr7 (106-166)||(3562678-3562738)
chr7 (106-166)||(8526794-8526854)
chr7 (106-173)||(23373377-23373447)
chr7 (1-72)||(44077962-44078034)
chr7 (9-72)||(21225641-21225703)
chr7 (6-93)||(21264127-21264214)
chr7 (111-165)||(14624607-14624661)
chr7 (6-64)||(23461121-23461179)
chr7 (108-166)||(34174028-34174085)
chr7 (3-64)||(45782122-45782184)
chr7 (404-469)||(107495-107560)
chr7 (106-151)||(23373667-23373712)
chr7 (106-166)||(11843423-11843483)
chr7 (106-162)||(39181939-39181995)
chr7 (106-162)||(41452495-41452551)
chr7 (106-154)||(43517158-43517206)
[»] chr3 (79 HSPs)
chr3 (1-172)||(3328805-3328976)
chr3 (1-166)||(26628023-26628188)
chr3 (5-164)||(28154882-28155041)
chr3 (7-166)||(22447738-22447897)
chr3 (1-167)||(4522095-4522259)
chr3 (1-164)||(8338940-8339103)
chr3 (3-166)||(34878527-34878690)
chr3 (1-166)||(13081035-13081200)
chr3 (1-166)||(28173727-28173892)
chr3 (1-154)||(6927611-6927763)
chr3 (3-168)||(22500592-22500756)
chr3 (1-163)||(23428620-23428782)
chr3 (1-163)||(30155146-30155308)
chr3 (1-165)||(8542751-8542915)
chr3 (1-166)||(32960643-32960805)
chr3 (1-164)||(27852753-27852914)
chr3 (1-169)||(25179719-25179884)
chr3 (1-166)||(48907291-48907455)
chr3 (1-165)||(26633360-26633522)
chr3 (3-167)||(25022661-25022824)
chr3 (16-163)||(40836181-40836326)
chr3 (1-144)||(10743548-10743691)
chr3 (1-167)||(46673042-46673211)
chr3 (2-165)||(20001851-20002012)
chr3 (106-170)||(27852997-27853061)
chr3 (1-166)||(1743390-1743555)
chr3 (106-167)||(25179575-25179636)
chr3 (3-165)||(33279585-33279745)
chr3 (1-81)||(3781019-3781099)
chr3 (1-81)||(3821023-3821103)
chr3 (106-164)||(8339186-8339244)
chr3 (2-72)||(26126998-26127068)
chr3 (1-94)||(22416475-22416568)
chr3 (16-93)||(31039048-31039125)
chr3 (3-72)||(43668571-43668640)
chr3 (106-166)||(22447990-22448050)
chr3 (106-165)||(10743408-10743467)
chr3 (6-97)||(26177023-26177114)
chr3 (106-165)||(48907537-48907596)
chr3 (106-164)||(3329059-3329117)
chr3 (5-155)||(23320506-23320655)
chr3 (106-166)||(4521952-4522012)
chr3 (106-166)||(26628271-26628331)
chr3 (1-153)||(36311292-36311444)
chr3 (106-166)||(40836424-40836484)
chr3 (106-165)||(8542609-8542668)
chr3 (106-161)||(23428865-23428920)
chr3 (111-166)||(36311150-36311205)
chr3 (106-164)||(13080894-13080952)
chr3 (6-92)||(20626794-20626880)
chr3 (1-95)||(46387650-46387744)
chr3 (106-166)||(33279830-33279890)
chr3 (107-162)||(4775852-4775907)
chr3 (1-67)||(32463516-32463583)
chr3 (1-95)||(48860843-48860938)
chr3 (108-174)||(5001190-5001256)
chr3 (106-164)||(22500840-22500898)
chr3 (113-171)||(25336351-25336409)
chr3 (15-97)||(33105096-33105178)
chr3 (106-164)||(48860704-48860762)
chr3 (107-167)||(19984846-19984906)
chr3 (106-166)||(30155389-30155449)
chr3 (106-175)||(32960856-32960921)
chr3 (107-174)||(22776856-22776923)
chr3 (106-165)||(26723904-26723963)
chr3 (16-67)||(48743228-48743279)
chr3 (3-64)||(2683091-2683153)
chr3 (106-164)||(46673292-46673350)
chr3 (106-168)||(50296202-50296264)
chr3 (108-170)||(50380149-50380211)
chr3 (117-154)||(14076422-14076459)
chr3 (106-167)||(40630625-40630686)
chr3 (116-165)||(48860930-48860979)
chr3 (107-172)||(51038834-51038899)
chr3 (110-167)||(52276301-52276358)
chr3 (106-154)||(6248453-6248501)
chr3 (106-170)||(22416327-22416390)
chr3 (110-166)||(28263158-28263214)
chr3 (110-166)||(52281594-52281650)
[»] scaffold0607 (2 HSPs)
scaffold0607 (1-165)||(2047-2212)
scaffold0607 (106-168)||(2294-2355)
[»] scaffold0406 (2 HSPs)
scaffold0406 (1-166)||(2132-2296)
scaffold0406 (106-164)||(1997-2055)
[»] chr8 (54 HSPs)
chr8 (1-169)||(19391383-19391550)
chr8 (5-165)||(5192271-5192430)
chr8 (1-168)||(4807596-4807763)
chr8 (1-166)||(33895515-33895679)
chr8 (1-161)||(12723264-12723424)
chr8 (1-165)||(19924406-19924570)
chr8 (1-168)||(23565230-23565397)
chr8 (1-166)||(8802398-8802563)
chr8 (5-161)||(22452176-22452332)
chr8 (1-161)||(30784268-30784427)
chr8 (1-166)||(17648384-17648548)
chr8 (1-166)||(4518867-4519030)
chr8 (1-151)||(38630196-38630346)
chr8 (1-166)||(44147112-44147276)
chr8 (39-166)||(21929845-21929972)
chr8 (1-94)||(7117184-7117277)
chr8 (1-90)||(18252960-18253049)
chr8 (1-166)||(18881502-18881666)
chr8 (15-154)||(15869347-15869487)
chr8 (1-165)||(21666273-21666437)
chr8 (6-163)||(32400325-32400480)
chr8 (1-94)||(31268419-31268513)
chr8 (1-162)||(3208121-3208281)
chr8 (106-166)||(19392812-19392872)
chr8 (106-164)||(19924265-19924323)
chr8 (115-164)||(33895375-33895424)
chr8 (106-166)||(18881747-18881807)
chr8 (106-166)||(21930047-21930107)
chr8 (106-166)||(23565119-23565179)
chr8 (106-174)||(44146962-44147030)
chr8 (106-173)||(8802645-8802712)
chr8 (106-160)||(12723507-12723561)
chr8 (106-164)||(30784510-30784568)
chr8 (1-74)||(41688200-41688273)
chr8 (106-165)||(4519113-4519172)
chr8 (106-161)||(5192517-5192572)
chr8 (106-165)||(17648242-17648301)
chr8 (40-153)||(1824784-1824895)
chr8 (40-153)||(1859229-1859340)
chr8 (116-172)||(2053141-2053197)
chr8 (106-174)||(7116393-7116461)
chr8 (5-68)||(16233602-16233666)
chr8 (1-64)||(41385590-41385653)
chr8 (106-164)||(21666519-21666577)
chr8 (17-90)||(17813010-17813083)
chr8 (106-172)||(18252393-18252461)
chr8 (108-173)||(31947845-31947910)
chr8 (109-154)||(34602024-34602069)
chr8 (16-64)||(132538-132586)
chr8 (106-166)||(4807847-4807907)
chr8 (106-166)||(22452419-22452479)
chr8 (109-169)||(27453534-27453594)
chr8 (1-66)||(30199504-30199570)
chr8 (116-164)||(32400576-32400624)
[»] chr1 (63 HSPs)
chr1 (1-164)||(3616940-3617102)
chr1 (1-165)||(24196402-24196566)
chr1 (1-164)||(24962094-24962257)
chr1 (1-165)||(4059521-4059685)
chr1 (1-164)||(19077926-19078088)
chr1 (1-164)||(19125816-19125978)
chr1 (1-163)||(48471864-48472026)
chr1 (1-163)||(43706655-43706817)
chr1 (1-167)||(46432213-46432379)
chr1 (1-166)||(27092851-27093015)
chr1 (1-166)||(51719121-51719285)
chr1 (3-166)||(2425367-2425529)
chr1 (1-154)||(29676220-29676373)
chr1 (1-93)||(28920727-28920820)
chr1 (1-95)||(24749939-24750033)
chr1 (1-163)||(16551645-16551806)
chr1 (1-164)||(2657513-2657675)
chr1 (111-165)||(24750020-24750074)
chr1 (106-163)||(50334719-50334776)
chr1 (34-166)||(16972025-16972156)
chr1 (106-166)||(28920897-28920957)
chr1 (34-161)||(21148121-21148248)
chr1 (106-171)||(24196254-24196319)
chr1 (1-164)||(2260378-2260541)
chr1 (106-165)||(3616798-3616857)
chr1 (106-172)||(24961945-24962011)
chr1 (106-168)||(29676075-29676137)
chr1 (106-166)||(4059768-4059828)
chr1 (2-65)||(16858472-16858536)
chr1 (106-165)||(19078169-19078228)
chr1 (106-165)||(19126059-19126118)
chr1 (1-72)||(29182092-29182163)
chr1 (1-72)||(47685242-47685313)
chr1 (106-164)||(43706899-43706957)
chr1 (1-70)||(18606777-18606846)
chr1 (1-72)||(22786171-22786239)
chr1 (7-68)||(30936514-30936575)
chr1 (5-161)||(4455045-4455201)
chr1 (106-166)||(18606929-18606989)
chr1 (106-164)||(46432462-46432520)
chr1 (1-142)||(9554223-9554364)
chr1 (5-85)||(26605356-26605436)
chr1 (106-154)||(28552315-28552363)
chr1 (1-81)||(31084695-31084775)
chr1 (106-154)||(43914917-43914965)
chr1 (111-166)||(2657762-2657817)
chr1 (106-165)||(14601738-14601797)
chr1 (1-72)||(21185345-21185415)
chr1 (106-165)||(28919014-28919073)
chr1 (106-164)||(10684794-10684852)
chr1 (108-166)||(50503699-50503757)
chr1 (3-55)||(18106817-18106870)
chr1 (106-151)||(28552594-28552639)
chr1 (109-154)||(30107064-30107109)
chr1 (108-165)||(31084615-31084672)
chr1 (107-144)||(50334811-50334848)
chr1 (107-164)||(51684366-51684423)
chr1 (106-166)||(5971084-5971144)
chr1 (138-174)||(16551891-16551927)
chr1 (106-162)||(16878931-16878987)
chr1 (107-167)||(35067046-35067106)
chr1 (112-164)||(48472113-48472165)
chr1 (106-166)||(51719366-51719426)
[»] chr2 (54 HSPs)
chr2 (1-166)||(18537827-18537991)
chr2 (1-166)||(30714273-30714437)
chr2 (1-164)||(15735205-15735367)
chr2 (1-164)||(38716334-38716496)
chr2 (1-164)||(9787700-9787861)
chr2 (1-171)||(11176048-11176218)
chr2 (1-164)||(17368357-17368518)
chr2 (3-154)||(25298811-25298962)
chr2 (1-170)||(2986827-2986996)
chr2 (1-162)||(22191187-22191347)
chr2 (1-166)||(15700888-15701052)
chr2 (1-166)||(6763715-6763880)
chr2 (5-164)||(9051028-9051186)
chr2 (106-174)||(30714520-30714588)
chr2 (107-173)||(22191037-22191103)
chr2 (1-166)||(25884176-25884340)
chr2 (4-94)||(4104894-4104984)
chr2 (106-172)||(9051273-9051339)
chr2 (1-90)||(22387141-22387231)
chr2 (1-164)||(28365651-28365813)
chr2 (106-167)||(9787557-9787618)
chr2 (106-166)||(18538074-18538134)
chr2 (106-165)||(11175906-11175965)
chr2 (106-168)||(15735060-15735122)
chr2 (6-55)||(15147859-15147908)
chr2 (106-166)||(4587858-4587918)
chr2 (106-166)||(38716192-38716252)
chr2 (2-64)||(35844859-35844922)
chr2 (2-68)||(14743460-14743526)
chr2 (106-167)||(25299046-25299107)
chr2 (106-166)||(15700745-15700805)
chr2 (106-161)||(2986689-2986744)
chr2 (106-165)||(6763963-6764022)
chr2 (2-72)||(21773423-21773493)
chr2 (4-170)||(36464417-36464581)
chr2 (1-93)||(26829160-26829252)
chr2 (108-172)||(52297-52361)
chr2 (1-56)||(19618881-19618937)
chr2 (1-64)||(22698947-22699011)
chr2 (115-163)||(25884434-25884482)
chr2 (106-173)||(24607779-24607846)
chr2 (2-68)||(2190675-2190741)
chr2 (2-67)||(11919788-11919854)
chr2 (108-154)||(20480087-20480133)
chr2 (116-166)||(21773331-21773381)
chr2 (107-165)||(26829332-26829390)
chr2 (404-442)||(29931076-29931114)
chr2 (106-167)||(20126182-20126243)
chr2 (108-173)||(36449769-36449834)
chr2 (1-41)||(4588002-4588042)
chr2 (1-64)||(9775461-9775525)
chr2 (106-154)||(13652202-13652250)
chr2 (108-152)||(28719329-28719373)
chr2 (114-166)||(32677814-32677866)
[»] chr6 (56 HSPs)
chr6 (1-160)||(14572182-14572341)
chr6 (1-167)||(18749094-18749259)
chr6 (1-164)||(25819825-25819988)
chr6 (1-166)||(35102489-35102654)
chr6 (1-165)||(18791498-18791663)
chr6 (1-166)||(32451867-32452032)
chr6 (1-95)||(31210935-31211029)
chr6 (1-169)||(4597400-4597568)
chr6 (1-174)||(34834066-34834238)
chr6 (1-96)||(20863796-20863891)
chr6 (1-166)||(24603502-24603666)
chr6 (1-72)||(22269547-22269618)
chr6 (1-72)||(26710399-26710470)
chr6 (1-95)||(24051149-24051243)
chr6 (3-151)||(15298628-15298775)
chr6 (5-172)||(3118824-3118989)
chr6 (106-167)||(4597651-4597712)
chr6 (106-164)||(25819685-25819743)
chr6 (1-90)||(9241793-9241882)
chr6 (106-166)||(18791356-18791416)
chr6 (106-166)||(24051007-24051067)
chr6 (106-174)||(32451716-32451784)
chr6 (3-94)||(22968226-22968316)
chr6 (1-68)||(23124816-23124883)
chr6 (3-94)||(23820077-23820167)
chr6 (106-165)||(31210793-31210852)
chr6 (106-164)||(26710553-26710611)
chr6 (1-54)||(8412899-8412952)
chr6 (111-168)||(24615940-24615997)
chr6 (106-166)||(14572422-14572482)
chr6 (110-165)||(35102713-35102768)
chr6 (106-164)||(8415294-8415352)
chr6 (106-164)||(18749374-18749432)
chr6 (115-165)||(32682531-32682581)
chr6 (106-163)||(4013911-4013968)
chr6 (1-94)||(34528289-34528382)
chr6 (429-493)||(5711169-5711233)
chr6 (117-164)||(9241651-9241698)
chr6 (2-72)||(11661011-11661082)
chr6 (111-166)||(22968404-22968459)
chr6 (111-166)||(23819934-23819989)
chr6 (119-166)||(34833923-34833970)
chr6 (1-94)||(2636918-2637012)
chr6 (9-93)||(24615764-24615849)
chr6 (1-94)||(26240098-26240191)
chr6 (1-72)||(19282305-19282374)
chr6 (108-168)||(27322113-27322172)
chr6 (107-166)||(6842327-6842386)
chr6 (7-65)||(12293724-12293783)
chr6 (2-93)||(14195702-14195792)
chr6 (1-94)||(4371039-4371126)
chr6 (112-174)||(27447962-27448024)
chr6 (16-72)||(2058926-2058982)
chr6 (1-72)||(12427373-12427445)
chr6 (106-166)||(23124932-23124992)
chr6 (107-167)||(27437825-27437885)
[»] chr4 (66 HSPs)
chr4 (1-164)||(13397675-13397838)
chr4 (1-166)||(13826418-13826582)
chr4 (1-165)||(25011876-25012039)
chr4 (1-166)||(19232341-19232506)
chr4 (1-166)||(43793629-43793794)
chr4 (1-165)||(15058819-15058981)
chr4 (1-154)||(4357393-4357545)
chr4 (1-164)||(5304347-5304510)
chr4 (1-144)||(25618648-25618790)
chr4 (1-162)||(41034777-41034936)
chr4 (1-166)||(4433181-4433346)
chr4 (1-161)||(27018355-27018516)
chr4 (1-175)||(35475430-35475603)
chr4 (33-164)||(13394536-13394667)
chr4 (3-154)||(52838370-52838523)
chr4 (1-166)||(2931462-2931625)
chr4 (1-163)||(41877030-41877189)
chr4 (1-154)||(6788968-6789121)
chr4 (1-164)||(45633578-45633740)
chr4 (1-64)||(2715817-2715880)
chr4 (1-72)||(51291261-51291332)
chr4 (1-95)||(1588483-1588576)
chr4 (1-164)||(4098798-4098960)
chr4 (11-84)||(15734549-15734622)
chr4 (16-174)||(47869811-47869967)
chr4 (106-170)||(18259357-18259421)
chr4 (115-174)||(2931311-2931370)
chr4 (106-165)||(13397921-13397980)
chr4 (38-94)||(6209309-6209365)
chr4 (1-164)||(9397333-9397493)
chr4 (2-67)||(16291777-16291843)
chr4 (106-174)||(25618842-25618910)
chr4 (106-166)||(35475289-35475349)
chr4 (1-93)||(36729159-36729251)
chr4 (106-166)||(41877270-41877330)
chr4 (106-166)||(55780385-55780445)
chr4 (106-166)||(55844565-55844625)
chr4 (5-64)||(23362576-23362635)
chr4 (106-168)||(24626462-24626524)
chr4 (106-164)||(25011735-25011793)
chr4 (111-164)||(4433433-4433485)
chr4 (106-167)||(43793876-43793937)
chr4 (106-166)||(5304591-5304651)
chr4 (109-165)||(6789207-6789263)
chr4 (116-164)||(52838231-52838279)
chr4 (117-164)||(17138540-17138587)
chr4 (1-60)||(55780527-55780586)
chr4 (1-60)||(55844707-55844766)
chr4 (106-164)||(4357252-4357310)
chr4 (1-165)||(9195661-9195827)
chr4 (108-154)||(12893220-12893266)
chr4 (6-72)||(15795463-15795529)
chr4 (17-167)||(20919332-20919481)
chr4 (111-165)||(24626221-24626275)
chr4 (106-166)||(9195908-9195968)
chr4 (5-64)||(33978876-33978936)
chr4 (106-173)||(40168630-40168697)
chr4 (2-56)||(40259673-40259728)
chr4 (111-166)||(45633436-45633491)
chr4 (117-167)||(1588669-1588719)
chr4 (404-493)||(14012643-14012732)
chr4 (124-161)||(20079151-20079188)
chr4 (106-166)||(1961170-1961230)
chr4 (106-154)||(6209487-6209535)
chr4 (4-72)||(24626312-24626380)
chr4 (125-161)||(27290825-27290861)
[»] chr5 (56 HSPs)
chr5 (1-165)||(16900996-16901160)
chr5 (1-174)||(245735-245908)
chr5 (1-167)||(18695144-18695309)
chr5 (1-165)||(25556876-25557038)
chr5 (1-166)||(31055313-31055477)
chr5 (1-154)||(40428649-40428802)
chr5 (1-165)||(26639036-26639200)
chr5 (4-168)||(16307473-16307636)
chr5 (1-164)||(36641284-36641442)
chr5 (1-166)||(38408769-38408933)
chr5 (1-165)||(19169484-19169648)
chr5 (1-165)||(10379422-10379585)
chr5 (49-166)||(31648173-31648290)
chr5 (106-166)||(23765635-23765695)
chr5 (106-166)||(23815483-23815543)
chr5 (1-165)||(38476469-38476632)
chr5 (1-166)||(17825495-17825660)
chr5 (1-94)||(8673927-8674019)
chr5 (111-166)||(23765418-23765473)
chr5 (111-166)||(23815266-23815321)
chr5 (1-173)||(2373286-2373458)
chr5 (15-94)||(41663593-41663672)
chr5 (106-164)||(18695004-18695062)
chr5 (1-166)||(37961246-37961411)
chr5 (106-166)||(245594-245654)
chr5 (1-166)||(7835850-7836014)
chr5 (1-72)||(17704679-17704750)
chr5 (6-95)||(23765460-23765548)
chr5 (6-95)||(23815308-23815396)
chr5 (3-67)||(20732628-20732693)
chr5 (106-166)||(25557120-25557180)
chr5 (106-166)||(38408627-38408687)
chr5 (111-162)||(7835722-7835773)
chr5 (106-165)||(8645796-8645855)
chr5 (5-67)||(38322345-38322408)
chr5 (56-154)||(8645946-8646043)
chr5 (106-164)||(31576493-31576551)
chr5 (1-74)||(462907-462980)
chr5 (3-72)||(15885257-15885326)
chr5 (5-94)||(34125205-34125294)
chr5 (111-164)||(40428888-40428941)
chr5 (4-72)||(10293179-10293247)
chr5 (106-166)||(10379281-10379341)
chr5 (106-166)||(20654040-20654100)
chr5 (109-165)||(26639286-26639342)
chr5 (106-165)||(17704828-17704887)
chr5 (106-165)||(24025020-24025079)
chr5 (114-161)||(37961502-37961549)
chr5 (106-172)||(3597315-3597381)
chr5 (117-163)||(4800935-4800981)
chr5 (6-60)||(7187335-7187388)
chr5 (111-145)||(7611428-7611462)
chr5 (6-67)||(18739861-18739923)
chr5 (6-67)||(38545373-38545435)
chr5 (106-167)||(36641140-36641201)
chr5 (3-71)||(35302007-35302075)
[»] scaffold0060 (2 HSPs)
scaffold0060 (1-165)||(66315-66478)
scaffold0060 (106-166)||(66181-66242)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-164)||(250518-250681)
[»] scaffold0179 (2 HSPs)
scaffold0179 (1-167)||(5647-5812)
scaffold0179 (106-165)||(5895-5954)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-154)||(24974-25127)
scaffold0087 (106-165)||(25210-25269)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-164)||(19423-19585)
scaffold0025 (1-165)||(61955-62123)
scaffold0025 (106-165)||(61813-61872)
[»] scaffold0001 (2 HSPs)
scaffold0001 (5-164)||(141945-142106)
scaffold0001 (106-166)||(142192-142252)
[»] scaffold0419 (2 HSPs)
scaffold0419 (5-164)||(2961-3119)
scaffold0419 (106-164)||(3206-3264)
[»] scaffold0062 (4 HSPs)
scaffold0062 (1-166)||(49800-49964)
scaffold0062 (1-166)||(62339-62503)
scaffold0062 (106-166)||(49657-49717)
scaffold0062 (106-166)||(62196-62256)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-166)||(5973-6136)
[»] scaffold0683 (2 HSPs)
scaffold0683 (26-166)||(5118-5259)
scaffold0683 (106-166)||(5288-5348)
[»] scaffold1875 (2 HSPs)
scaffold1875 (1-166)||(754-919)
scaffold1875 (106-170)||(1002-1065)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-82)||(3650-3731)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-163)||(455168-455331)
[»] scaffold0024 (1 HSPs)
scaffold0024 (6-173)||(43815-43982)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-94)||(9173-9267)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-163)||(112271-112429)
[»] scaffold0291 (2 HSPs)
scaffold0291 (1-94)||(10062-10155)
scaffold0291 (115-166)||(10178-10229)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-67)||(54512-54576)
[»] scaffold0474 (1 HSPs)
scaffold0474 (15-72)||(8072-8129)
[»] scaffold0174 (2 HSPs)
scaffold0174 (1-95)||(29857-29951)
scaffold0174 (111-164)||(29938-29991)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-94)||(2997-3091)
[»] scaffold0187 (1 HSPs)
scaffold0187 (56-96)||(4943-4983)
[»] scaffold0003 (2 HSPs)
scaffold0003 (112-174)||(39334-39396)
scaffold0003 (107-167)||(49477-49537)
[»] scaffold0203 (2 HSPs)
scaffold0203 (106-154)||(9572-9620)
scaffold0203 (106-154)||(14946-14994)


Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 181 - 631
Target Start/End: Complemental strand, 11603819 - 11603369
Alignment:
Q  181 ataattttccaaaccttatctattgtcaatctcaaatctcaatgttactttttcttaggttttggtaggttactaaaactatagagaaatttcaaacagt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11603819 ataattttccaaaccttatctattgtcaatctcaaatctcaatgttactttttcttaggttttggtaggttactaaaactatagagaaatttcaaacagt 11603720  T
Q  281 taatcgaaggagtaaatagtcggtcttgaatgtttcaagtattttcaataatatagaccttgaatgtatcaaaattataaaagtatcccggagtctttct 380  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  11603719 taatcgaaggagtaaatagtcggtcttgaatgtttcaagcattttcaataatatagaccttgaatgtatcaaaattataaaagtatcctgaagtctttct 11603620  T
Q  381 ttttgacgtgtttttcattgggcagtttggtccacaaacatgtcttctgttagtcagtttagtccatgatattactagcaaaagacacattcatggatgt 480  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  11603619 ttttgacgtgtttttcattggccagtttggtccacaaacatgtcttctgttagtcagtttagtccatgatattactagcaaaagacacactcatggatat 11603520  T
Q  481 ttttgtaatttcagtatattttgattgtaataacatcgcatcatacataaatatgaacaaaaatgacaatttagtctgatcaaatgtgtctcactctcat 580  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  11603519 ttttgtaatttcagtatattttgattgtaataacatcgcatcatacataaatatgaaccaaaatgacaatttagtctgatcaaacgtgtctcactctcat 11603420  T
Q  581 gtgacctcaaccacagttgctttttggcaaaaacataaacaatttgatgtc 631  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  11603419 gtgacctcaaccacagttgctttgtcgcaaaaacataaacaatttgatgtc 11603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 19195376 - 19195213
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||       
T  19195376 accccttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcaacaatttttggatgaaaggggccaaaattgcta-tt 19195278  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||||| |||||||||||| ||||| |||||||||||| ||||| || ||||||||||    
T  19195277 tttttaataggggaccaaaattgcaatattttgaaacatagggggtgaaaaatgcagtttagcct 19195213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 31494051 - 31494214
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  31494051 accccttatctttacaaaaagttgcgattatggccccttttttggaacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaattgccattt 31494150  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||||||||| |||||||||| |||||||| | ||||||| || |||||||||    
T  31494151 tttttaatagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagcc 31494214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 21224515 - 21224351
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  21224515 accccttatctttacaaaaagttgcgattatggccctttttttgagacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgcta-tt 21224417  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         |||||||| |||||||||||||||||| |||||||  ||||||||| || ||||||||||||    
T  21224416 tttttaataggggaccaaaattgcaacattttgaaacata-agggcgaaaaatgcagtttagcctat 21224351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20636760 - 20636931
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||| |       
T  20636760 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgttttctcagcaattttgggatg-aaggggccaaaattgccattt 20636858  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
         ||||||||| |||||| |||||||||| ||||||||||||||||||||| | |||||||| |||||||    
T  20636859 ttttaaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctttatttta 20636931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 42271473 - 42271637
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||| |||||||||||||| |||||| |||| |||||||| |||||||||||||||||||||||||| | ||||| |||| ||||||||  |       
T  42271473 accccttatgtttacaaaaagttgcgattatggccctttttttggaacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgtcattt 42271572  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  42271573 tttttaatagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcct 42271637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 19919766 - 19919595
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||| || | ||||||||| |       
T  19919766 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtagcgttttctcagcaattttgggatgaagggtgccaaaattgcca-tt 19919668  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
         |||| ||||||||||| |||||||||||||| ||||||||||||||||| | |||| ||||| |||||    
T  19919667 tttttaataaggggccaaaatcgcaacattttaaaatatagggggcgaaaagtgcactttaacctatttttta 19919595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 48176126 - 48175960
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  48176126 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctattt 48176027  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcg-aaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||| | |||||||||||||| ||||||| |||||||||||    
T  48176026 tttctaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttagccta 48175960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 41452412 - 41452271
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |       
T  41452412 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtgtcgtcttctcagcaatttttggatgaaaggggccaaaattgcaattt 41452313  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagg 142  Q
         ||||| |||||||||||||||||||||| ||||||||    
T  41452312 tttttaatagagggccaaaattgcaacattttagaacatagg 41452271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 2331157 - 2331323
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnn 103  Q
    ||||||||||||||||||||| |||||| |||  |||||||||||| |||||||||||||||||||||||| |||||||||| | |||||||||          
T  2331157 ccttatctttacaaaaagttgcgattatggcctattttttgggacaagtggcgtcttctcagcaatttttggatgaaagggg-ccaaattgctatttttt 2331255  T
Q  104 nnaataggggg------ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
      |||||||||      |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2331256 ttaatagggggccaaaaccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2331323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 3562596 - 3562443
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||| | ||||| |||| |||||||||         
T  3562596 accccttatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcagcaagtttaggatgaagggggccaaaattgcctttt 3562497  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         |||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  3562496 tttttaatagggggccaaaatcgcaacattttgaaacatagggagcgaaaagtg 3562443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11843341 - 11843177
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||| |||||||||||||  ||||| ||||||||||| | | |||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  11843341 accccttatccttacaaaaagttgcaattatggcccctttttttgaatacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgccattt 11843242  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||| |||||||| |||||||||| ||||||||||||||| ||||| ||||||||||    
T  11843241 tttttaatagggagccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 11843177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 27869358 - 27869195
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| | ||||| | || |||||||| |        
T  27869358 accccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttgggatgaaggaggccaaaattg-tcatt 27869260  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||| |||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  27869259 tttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 27869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 35337685 - 35337523
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||  |||||||  |||||||||| |||||||||||       
T  35337685 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcaataattttttgatgaaaggggccaaaattgcta-tt 35337587  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||| |||||| ||||| |||||||||||||  |||||||||||| | |||||||    
T  35337586 tttttaataggggaccaaaactgcaatattttaaaacataaagggcgaaaagtgcaatttagcc 35337523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 10655470 - 10655632
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||| |||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  10655470 accccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctattt 10655569  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||| | |||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  10655570 tttttaataggggacaaaaattgcaacattttgaaacata-gaggcgaaaagtgcagtttagcc 10655632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13577949 - 13577789
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| |||||| ||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  13577949 accctttatctatacaaaaagttgaaattatggccccttttttggaacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcca-tt 13577851  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
         |||||||||||||||| |||||||||| |||||||| | |||| ||||| |||||||    
T  13577850 tttttaatagggggccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtttag 13577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24597678 - 24597515
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||| |||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||| |       
T  24597678 accccttctctttacaaaaagttgcgattatggccccttgtttgagacacgtggcgtcttctcagcaattttgggatg-aaggggccaaaattgcca-tt 24597581  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||||||||||  ||||||||| ||||||||| ||||||||||| | |||||||||    
T  24597580 tttttaatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagccta 24597515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 8526946 - 8527108
Alignment:
Q  11 tttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatag 110  Q
    ||||||||||||||  ||||| |||||||||||| |||||||||| |||||||||||||||| | |||||  ||| ||||||||| |        |||||    
T  8526946 tttacaaaaagttgcaattatggccccttttttgagacacgtggcatcttctcagcaattttgggatgaagagggccaaaattgcca-tttttttaatag 8527044  T
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| | |||||||| ||||||||    
T  8527045 ggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcctttattttat 8527108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36746666 - 36746573
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||    
T  36746666 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaattg 36746573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17305905 - 17306049
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctann 99  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||| | |||||||||  ||||||||  |      
T  17305905 accccttatttttacaaaaagttgtgattatgacccccttttttgggacatgtggcgtcttctcatcaattttgggatgaaagggcccaaaattgtcatt 17306004  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttaaaacatagggg 144  Q
          || | ||||||||||||||||||||||||||||||||||    
T  17306005 ttttttaaaaaggggccaaaattgcaacattttaaaacatagggg 17306049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 39182075 - 39182238
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| ||| || ||||||||||||||| || |||||||||||||| | |  ||||||| |||||||| |        
T  39182075 accccttatcttctcaaaaagttgcgattatggcctctgttttgggacacgtggtgttttctcagcaattttgggacaaaaggggccaaaattg-tcatt 39182173  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  39182174 tttttaatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcct 39182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10023947 - 10023782
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| || ||| |||||||||| ||||||||||| |||||||||||||||||   |  ||||||| ||||||||  |       
T  10023947 accccttatctttacaaaaagttgcgaatatggccccttttt-gggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaattgaca-tt 10023850  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
         ||||||||| |||| | |||||||||||||| ||||||||||||||||| |||||| ||||||    
T  10023849 tttttaatagggggtcaaactcgcaacattttaaaatatagggggcgaaaagtgcagtttaacctata 10023782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 19493460 - 19493623
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| |||||||  |||||||| |||||||| |||||| |||| |||||||||||||||||||||| ||||| | |||||||||| |||||||||||       
T  19493460 accctttatcttctcaaaaagt-gtgattatggcccctgttttaggacacgtggcgtcttctcagccattttgggatgaaaggggccaaaattgcta--t 19493556  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         ||||||||| |||||| ||||||||||||||| ||  ||||||||| || |||||| |||||    
T  19493557 tttttaatagggggtcaaaatcgcaacattttaaaacttaaagggcgaaaaatgcagtttaacctat 19493623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24448206 - 24448041
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttt-tgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctann 99  Q
    ||||||||||||||||||||  ||||||||| ||||||||||  |||||||| | |||||||||||||||||| ||| |||||||  |||||| ||        
T  24448206 accccttatctttacaaaaaaatgtgattatggcccctttttaagggacacgcgacgtcttctcagcaattttggaacgaaagggaccaaaatcgc---a 24448110  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
          ||||||||  |||||| ||||||||||||||| | |||||||||||||| |||||||||||||    
T  24448109 ttttttaataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcctata 24448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15681771 - 15681934
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| ||| ||||||||||||||||||||||||||||  |||||| | | |||||||| ||||||||  |       
T  15681771 accccttatcttgtcaaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcataaattttgggacgaaaggggccaaaattgtaattt 15681870  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         | |||| ||||||||| |||||||||| |||| |||||| | ||||||| |||||||||    
T  15681871 tttttattaggaggccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagcc 15681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4193691 - 4193783
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    ||||||||||||| ||||||||||  ||||| |||||||||||| |||||||| |||||| ||||||||||| ||| |||||||| |||||||    
T  4193691 accccttatcttttcaaaaagttgcaattatggccccttttttgagacacgtgacgtcttttcagcaattttggaaggaaaggggccaaaatt 4193783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5087137 - 5087230
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||| |||||||||| ||||||   |||| ||||||||||||||||||||||||| ||||||| | | |||||||| ||||||||    
T  5087137 accccttatcttttcaaaaagttgcgattatgatccctattttgggacacgtggcgtcttctcatcaattttgggacgaaaggggccaaaattg 5087230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 48176208 - 48176276
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||  |||||||||||||||||||    
T  48176208 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcctatattttat 48176276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14624743 - 14624814
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  14624743 accctttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcatgttctcagcaatttt 14624814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18754429 - 18754306
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||| |||| ||||||  | | |||| ||||||||||||  |||||| | ||||||| | ||||||||||||||||||||||       
T  18754429 accccttatctttacaaaatgttgcgattatgacacattttctgggacacgtggtatcttctgatcaattttgggatgaaaggggtcaaaattgctattt 18754330  T
Q  101 nnnnnaatagggggccaaaattgc 124  Q
         |||||||||||||||||||    
T  18754329 tttttaatagggggccaaaattgc 18754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 36746749 - 36746806
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36746749 aatagggggccaaaattgcaacattttaaaacata-ggggcgaaaagtgtagtttagcc 36746806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 26385406 - 26385567
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    ||||||||  |||||||||| |||||| |||| | |||||||||| |||||||||| | ||||||||| | |  ||||||| ||||||||  |           
T  26385406 cttatcttctcaaaaagttgcgattatggcccatgttttgggacatgtggcgtcttattagcaattttaggacaaaaggggccaaaattgtcatttttat 26385505  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
     |||||||||||||||| |||||||||| |||| ||||||||  |||||| |||||| ||||    
T  26385506 aaatagggggccaaaatcgcaacattttgaaacttagggggcagaaagtgcagtttatccta 26385567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 20636677 - 20636617
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||    
T  20636677 aatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagccta 20636617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 20638549 - 20638489
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||    
T  20638549 aatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagccta 20638489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26126395 - 26126555
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| |||||| |||||||||||| | | ||||||| |||||||| |||  ||||||| | ||||||| |       
T  26126395 accccttatcttctcaaaaagttgcgattatggcccctgttttgggacacgagacatcttctctgcaattttggaacaaaaggggccgaaattgcca-tt 26126493  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
         |||||| |||||||||| ||||||||  |||| |||| ||||||||||| |||||||    
T  26126494 tttttaataggcggccaaaattacaacatttataaacttaggaggcgaaaagtgtagtttag 26126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 33237561 - 33237493
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggg 84  Q
    ||||||||||||||||  || || ||||||||||||||||||||||||||||||||| | |||||||||    
T  33237561 aaaaagttgtgattatgaccactgttttgggacacgtggcgtcttctcagcaattttgggatgaaaggg 33237493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 24597761 - 24597828
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    ||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  24597761 aatagggggacaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaaaatttta 24597828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 39440281 - 39440186
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaa-ggggtcaaaattgcta 97  Q
    ||||||||||| |||||||||| ||||||  ||||| |||| ||||| |||||||||||||| |||||||  || |||| ||||||||||||||||    
T  39440281 cccttatcttttcaaaaagttgcgattatgacccctgttttaggacatgtggcgtcttctcaacaattttaaaacgaaagggggtcaaaattgcta 39440186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 19195459 - 19195517
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  19195459 aatagggggtcaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagcc 19195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 2331072 - 2331015
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    |||| ||||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  2331072 aataaggggccaaaattgcaacattttaaaacttagaggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6650651 - 6650744
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  |||||||||| |||||| |||||| ||||| |||| |||||||||||||| ||||||| | | ||||||||  |||||||    
T  6650651 accccttatcttctcaaaaagttgcgattatggcccctgttttgagacatgtggcgtcttctcatcaattttgggacgaaaggggctaaaattg 6650744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9822262 - 9822170
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  |||||||||| ||||||  ||||||||| ||||||| ||||||||||||||||||||| | | ||||||||  |||||||    
T  9822262 accccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagcaattttgggacgaaaggggctaaaattg 9822170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10724187 - 10724095
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  |||||||||| ||||||  ||||||||| ||||||| ||||||||||||||||||||| | | ||||||||  |||||||    
T  10724187 accccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagcaattttgggacgaaaggggctaaaattg 10724095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 21690474 - 21690413
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||| |||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  21690474 aataaggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcctat 21690413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 38722965 - 38722900
Alignment:
Q  3 cccttatctttac-aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||||||| ||||||||| |||| | |||||||||||||||||||||||| ||||||||||    
T  38722965 cccttatctttaccaaaaagttgcgattttggccccttttttgggacacgtggcggcttctcagca 38722900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 19919847 - 19919907
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  19919847 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 19919907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 3403200 - 3403042
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaataggggg 114  Q
    |||||| ||| ||||||  || ||||||||||||| ||||||||| ||||| |||||| | | |||||||| ||||||||  |        |||||||||    
T  3403200 caaaaacttgcgattatgaccacttttttgggacatgtggcgtctcctcaggaattttgggacgaaaggggccaaaattgtaatttttt--aataggggg 3403103  T
Q  115 ccaaaattgcaacattttaaaacataggggg-cgaaaagtgaagtttagcctatattttat 174  Q
     |||||| |||||||||||||||  |||||| ||||||||| |||||| ||||| ||||||    
T  3403102 tcaaaatcgcaacattttaaaactcagggggtcgaaaagtgcagtttaacctattttttat 3403042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 7365367 - 7365458
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    |||||||||  |||||||||| |||||| ||| || |||||||||||||| | |||||||||||||||| | | |||| ||| |||||||||    
T  7365367 ccttatcttctcaaaaagttgcgattattgcctctgttttgggacacgtgacatcttctcagcaattttgggacgaaaagggccaaaattgc 7365458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 15093900 - 15093821
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||| ||||||||||| | ||||| | |||||| |||||||||||||||||| ||| |||||||  ||||||||    
T  15093900 caaaaagttgcgattatagcccatgttttgaggcacgtgacgtcttctcagcaattttggaacgaaagggaccaaaattg 15093821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5348168 - 5348262
Alignment:
Q  1 accccttatctt-tacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||| || ||||||||| |||||| || ||| |||||||| | ||| |||||||||||||||||| | | ||||| |||||||||||    
T  5348168 accccttatcttctaaaaaaagttgcgattatggctcctgttttgggatatgtgacgtcttctcagcaattttgggacgaaagaggtcaaaattg 5348262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 10655388 - 10655330
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| |||||||||| |||||||||||||||| |||||||| ||||||| |||||||||    
T  10655388 aataaggggccaaaactgcaacattttaaaacttagggggcaaaaagtggagtttagcc 10655330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 17305822 - 17305764
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| ||| || |||||||||||||||||||    
T  17305822 aatagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 17305764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 21224601 - 21224659
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||| |||||| |||||||||| |||| ||| |||||||||||||||||||||||||    
T  21224601 agggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctat 21224659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 18754512 - 18754573
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||| ||||||| |||||||||| |||| |||||||||||||||| |||||| |||||    
T  18754512 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttaacctat 18754573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24464717 - 24464810
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  ||||| |||| |||||| | |  | ||||| |||| |||||||||||||||||||||| ||||||| |||| ||||||||    
T  24464717 accccttatcttctcaaaatgttgcgattatggtcattgttttgtgacatgtggcgtcttctcagcaattttagaatgaagggggacaaaattg 24464810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 27869441 - 27869509
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||  ||||||| |||||||||| |||| ||| ||||||||||||||||||| |||||| |||||    
T  27869441 aatagggctccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttaacctataatttat 27869509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42303288 - 42303459
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||| ||| ||| ||  |||||||| |||||||||||| |||||||||||||||||   |  ||||||| ||||||||  |       
T  42303288 accccttatcttctcaaaaacttgcgatcatgacccctttt-tgggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaattgtcattt 42303386  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
         ||||| || ||||||| ||||| |||| |||| |||||| ||| ||||| ||||||||||| ||||||    
T  42303387 ttttaaatagaggaccaaaatcgcaactttttgaaacttaggggtcgagaagtgcagtttagcctaaatttta 42303459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3148065 - 3148135
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||| ||| ||||||||||| |||  |||||||||| |||||||||||||| |||||||||||| |||||||    
T  3148065 accctttaactttacaaaaaattgcaattatagccc-ttttttgggacacgaggcgtcttctcaacaatttt 3148135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 6650602 - 6650543
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||| ||||||||||| |||| |||||||||| ||||||||||| |||| ||||||||||    
T  6650602 aataaggggccaaaatcgcaaaattttaaaacttagggggcgaacagtgcagtttagcct 6650543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 7365279 - 7365224
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||| | ||||||    
T  7365279 aatagggggcaaaaatcgtaacattttaaaacatagggggcgaaaagcgcagttta 7365224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23473135 - 23473194
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||| |||||||||||||||||  || || ||||||||||||||||| |||||||    
T  23473135 cttatcttttcaaaaagttgtgattatgacctctgttttgggacacgtggcggcttctca 23473194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 25002951 - 25003010
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||| ||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||||    
T  25002951 aataagggaccaaaatcgcaacattttaaaacttagggggcgaaaagtacagtttagcct 25003010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 31493969 - 31493910
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| | |||||||| |||| |||||| ||||||||| ||||||||||    
T  31493969 aatagggggccaaaatcgtaacattttgaaacttaggggccgaaaagtggagtttagcct 31493910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 1921041 - 1921083
Alignment:
Q  26 gattatagccccttttttgggacacgtggcgtcttctcagcaa 68  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  1921041 gattatggccccttttttgggacacgtggcggcttctcagcaa 1921083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 9154460 - 9154398
Alignment:
Q  3 cccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||||| |||||| |||| |||||| ||||||||| |||||||||||||| |||||||    
T  9154460 cccttatctttgcaaaaaagttgcgattatggccccttttatgggacacgtggcggcttctca 9154398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 46267405 - 46267343
Alignment:
Q  6 ttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||| |||||| ||||| ||||    
T  46267405 ttatctttacaaaaaagttgcgattatggccccttttttgggacatgtggcggcttctaagca 46267343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 47113261 - 47113315
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtctt 60  Q
    ||||||||| ||||||||| |||| | |||||| |||||||||||||||||||||    
T  47113261 ttatctttataaaaagttgcgattttggcccctgttttgggacacgtggcgtctt 47113315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 5490924 - 5490969
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||    
T  5490924 agggggccaaaattgcaactttttgaaacatagggggtgaaaagtg 5490969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 13578030 - 13578091
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||| ||| |||||| |||||||||| |||| |||||||||||||||  ||||||||||||    
T  13578030 aatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcctat 13578091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 23439737 - 23439798
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||||  ||||||||| ||||||  ||||| ||||||||||||||||| |||||||    
T  23439737 cccttatcttttaaaaaagttgcgattatgacccctgttttgggacacgtggcggcttctca 23439798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 23658825 - 23658764
Alignment:
Q  113 ggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||| ||||||||||||||| |||||  ||||||||| |||||| ||| ||||||||    
T  23658825 ggccaaaatcgcaacattttaaaacttagggatcgaaaagtgcagtttaacctttattttat 23658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 3562678 - 3562738
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| | |||||||| |||| ||| || |||||||||||||||| ||||    
T  3562678 aatagggggccaaaatcgtaacattttgaaacttagaggacgaaaagtgaagtttaaccta 3562738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 8526854 - 8526794
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| ||||||||||| ||||| |||| ||| ||| |||||||||| |||||||||    
T  8526854 aatagggggtcaaaattgcaaaattttgaaacttagagggtgaaaagtgaaatttagccta 8526794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 23373447 - 23373377
Alignment:
Q  106 aatagggggccaaaattgcaacatt---ttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||| ||||||||   ||||||| |||| ||||||||||||| |||| |||| ||||||    
T  23373447 aatagggggccaaaatcgcaacattttattaaaacttaggtggcgaaaagtgaaatttaacctacatttta 23373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44078034 - 44077962
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||||||||||| |||| ||||||  |  | |||||||||||| ||||||||||| |||||||||    
T  44078034 accccttatctttacaaaaaagttgcgattatgacatcctttttgggacacatggcgtcttcttagcaatttt 44077962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 21225703 - 21225641
Alignment:
Q  9 tctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||||||| |||||| | || |||||||| ||||||| |||||||||| |||||||    
T  21225703 tctttacaaaaagttgcgattat-gaccattttttggaacacgtgacgtcttctcaacaatttt 21225641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 21264214 - 21264127
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    ||||||||| |||||  ||||||| | | |||| ||||| |||| ||| |||||||||||||||| ||| ||||||| || |||||||    
T  21264214 ttatctttataaaaaactgtgattgtggaccctattttgagacatgtgacgtcttctcagcaattcttggatgaaagaggccaaaatt 21264127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 14624661 - 14624607
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||| |||| ||||| |||| |||||| ||||||||| ||||||||||    
T  14624661 ggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagtttagcct 14624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 23461179 - 23461121
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||| || |||||||||| ||||||  ||||| ||||||||||||||||| |||||||    
T  23461179 ttatcatttcaaaaagttgcgattatgacccctgttttgggacacgtggcggcttctca 23461121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 34174028 - 34174085
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||||||| | |||||||||    
T  34174028 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagccta 34174085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 45782184 - 45782122
Alignment:
Q  3 cccttatctttacaaaaag-ttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||||||||||||  ||| |||||| ||||||||||||||||||| || | |||||||    
T  45782184 cccttatctttacaaaaaaattgcgattatggccccttttttgggacacgcggtggcttctca 45782122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 107560 - 107495
Alignment:
Q  404 agtttggtccacaaacatgtcttctgttagtcagtttagtccatgatattactagcaaaagacaca 469  Q
    |||||||||  ||||  |||||| ||||||||| |||||||||| | ||||||| |||||||||||    
T  107560 agtttggtcaccaaatgtgtcttttgttagtcattttagtccataaaattactaacaaaagacaca 107495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 23373667 - 23373712
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaa 151  Q
    |||||||||  ||||| ||||||||||||||| |||||||||||||    
T  23373667 aatagggggttaaaatcgcaacattttaaaacttagggggcgaaaa 23373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 11843423 - 11843483
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| |||||||||| |||| || || |||||||||  |||||||||||    
T  11843423 aatagggggtcaaaatcgcaacattttgaaacttaaggagcgaaaagtagagtttagccta 11843483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 39181995 - 39181939
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
    |||||| ||||||||| ||||||||||||||| | | |||| ||||||| |||||||    
T  39181995 aataggaggccaaaatcgcaacattttaaaacttggagggccaaaagtgcagtttag 39181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 41452495 - 41452551
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
    ||||||||||||||||| ||||||||| |||| ||| || |||||| ||| ||||||    
T  41452495 aatagggggccaaaattacaacattttgaaacttagaggacgaaaaatgaggtttag 41452551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 43517158 - 43517206
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||| ||||||||| ||||||||||||||| ||| || |||||||||    
T  43517158 aataggaggccaaaatcgcaacattttaaaacttagtggacgaaaagtg 43517206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3328976 - 3328805
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  3328976 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctattt 3328877  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
         |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  3328876 tttttaatagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctttatttt 3328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 26628188 - 26628023
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  26628188 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgccattt 26628089  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  26628088 tttttaatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagccta 26628023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 28155041 - 28154882
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |           
T  28155041 cttatctttacaaaaagttgcgattatggccctttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgccattttttt 28154942  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  28154941 taatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 22447897 - 22447738
Alignment:
Q  7 tatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnna 106  Q
    |||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||| |||||||| |||||||||  |||||||||||        |    
T  22447897 tatctttacaaaaagttgcgattatggcccctttttttggatacgtggcgtcttctcagaaatttttggatgaaagggtccaaaattgctatttttttta 22447798  T
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22447797 atagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 22447738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4522095 - 4522259
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  4522095 accccttatctttacaaaaagttgcgattattgccccttttttgggacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaattgccattt 4522194  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         ||||||||||||||||  ||  |||||||||||||| |||||||||||| | ||||||||||    
T  4522195 tttttaatagggggccaaaat--cactattttaaaacatagagggcgaaaagtgcactttagcctat 4522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8339103 - 8338940
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  8339103 accccttatctttacaaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattt 8339004  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||| |||||| |||||||||| ||||||||||||||||||||| | |||||||    
T  8339003 tttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 34878690 - 34878527
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    |||||||||||||||||||||   ||||| || |||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||| |         
T  34878690 cccttatctttacaaaaagtttcaattatggcaccttttttgggacacgtggcgtcttctcagcaattttgagatgaaatgggtcaaaattgccattttt 34878591  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
       |||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||    
T  34878590 tttaatagggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagccta 34878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 13081035 - 13081200
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||| | ||||| |||| ||||||||| |       
T  13081035 accccttatctttacaaaaagttgcgattatggccccttttttgggacatgtggagtcttctcagcaattttgggatgaagggggccaaaattgccattt 13081134  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||||| ||||||||| ||||||||| | | |||||||||    
T  13081135 tttttaatagggggccaaaatcgcaacattttgaaacataggaggcgaaaagcgcactttagccta 13081200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 28173892 - 28173727
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||  ||||||||| | |||||||||| |||||||||||       
T  28173892 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaattgctactt 28173793  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||| | ||||||||||||||||||||| | |||||||||    
T  28173792 tttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 28173727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6927611 - 6927763
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| ||||||||| | ||||||||||  ||||||||||       
T  6927611 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcatcttctgagcaattttgggatgaaaggggctaaaattgcta-tt 6927709  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6927710 tttttaatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtg 6927763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 22500756 - 22500592
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    ||||||| |||||||||||||| |||||| | ||||||||| ||||||||||||||||||||| |||||||| ||||||||||  ||||||| ||         
T  22500756 cccttatatttacaaaaagttgcgattatggtccctttttttggacacgtggcgtcttctcagaaatttttggatgaaaggggctaaaattgata-tttt 22500658  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
       ||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||    
T  22500657 tttaatagggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcctata 22500592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23428782 - 23428620
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||| ||||       
T  23428782 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaatagctattt 23428683  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         |||||||| | |||||||||||||| | ||||||||||||||||||||| ||||||||    
T  23428682 tttttaataggggactaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagc 23428620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30155308 - 30155146
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| |||||||||||  |||||||||| |||||||| ||       
T  30155308 accccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttcgcagcaattttttgatgaaaggggccaaaattgttattt 30155209  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         |||| |||||||||| ||||||||||| ||| ||||||| ||||||||  ||||||||    
T  30155208 tttttaataaggggccaaaactgcaacattttgaaatataggggacgaaaagtacagtttagc 30155146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 8542751 - 8542915
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||| | ||||| || | ||||||||| |       
T  8542751 accccttatctttacaaaaagttgcaattatggccccttttttgtgacacgtggcgtcttctcagcaattttgggatgaagggagccaaaattgccattt 8542850  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||||||||||  |||||||||||||||||||| | |||||||| | ||||||||    
T  8542851 ttattaatagggggccaaaatcacaacattttaaaacatagggagtgaaaagtgcactttagcct 8542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 32960805 - 32960643
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||| |       
T  32960805 accccttatctttacaaaaagttgcgattatggcct-ttttttgggacacgtggcgtcttctcagtaattttgggatgaaaggggccaaaattgcca-tt 32960708  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||| |||||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  32960707 tttttaata-ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagccta 32960643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27852914 - 27852753
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| ||||||| |  |||| |||| ||||||||| |       
T  27852914 accccttatctttacaaaaagttgcgattatggcccc-tttttgggacacgtggcgtcttctcaacaattttgggctgaagggggccaaaattgcca-tt 27852817  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||| |||||||||||||||| ||||||||||||||||||||| | |||||||    
T  27852816 tttttaatagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27852753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 25179719 - 25179884
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||| | ||||| |||| || |||||| |       
T  25179719 accccttatctttacaaaaagttgcgattatggccccttttttgggacac--ggcgtcttctcagcaattttgggatgaagggggccataattgcca-tt 25179815  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatat 169  Q
         |||| |||||||| || |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  25179816 tttttaataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctatat 25179884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 48907455 - 48907291
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  48907455 accccttatctttaaaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcca-tt 48907357  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         | ||||||| ||||||  ||||||||| ||||||||||||  ||||||| | |||||||||    
T  48907356 tttttattagggggtcaaaatcacaacattttgaaacatagggggtcaaaagtgcactttagccta 48907291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26633522 - 26633360
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||  |||||| |||||||||| | |||||||| |||| | || |       
T  26633522 accccttatctttacaaaaagttgcgattatggccccttttttggggcacgtggcaccttctcggcaatttttggacgaaaggggccaaagtcgc-attt 26633424  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||||||||    
T  26633423 tttttaatagggggtcaaaatcgcaacattttaaaactta-ggggcgaaaagtgcagtttagcct 26633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 25022824 - 25022661
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    |||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||         
T  25022824 cccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgcta-tttt 25022726  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
       || ||||||||||||| |||| ||| | ||||||| ||||| ||||||| | ||||||||||    
T  25022725 tttaacagggggccaaaatcgcaatattatgaaacatatggggcaaaaagtgcactttagcctat 25022661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 40836326 - 40836181
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggc 115  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||| ||          ||||| || |    
T  40836326 aaaaagttgcgattatggccccttttttgggacacgtggcggcttctcagcaattttggaacgaaaggggccaaaatcgc--atttttttaatagaggac 40836229  T
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    |||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  40836228 caaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 10743548 - 10743691
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||| |||||||| |||| | ||||||||| | |||||||||| |||||||||||       
T  10743548 accccttatctttacaaaaagttgcgattatgaccccttttctgggtcacgtggcatcttttgagcaattttgggatgaaaggggccaaaattgctaatt 10743647  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggg 144  Q
         ||||||||| |||||| |||||||| | |||||||||||    
T  10743648 tttttaatagggggtcaaaatcgcaacattatgaaacatagggg 10743691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 46673211 - 46673042
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc--ta 97  Q
    |||||||||||||||||||| |||| ||||||  |||||||| | ||||||||||| |||||| ||||||||| | |||||||||| |||||||||  |     
T  46673211 accccttatctttacaaaaaagttgcgattatgaccccttttctaggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctttt 46673112  T
Q  98 nnnnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
            ||||||||||||||||||||||||| | ||||||||| | ||||||||| | ||||||||||    
T  46673111 ttttttttaatagggggccaaaattgcaacattatgaaacataggagacgaaaagtgcactttagcctat 46673042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 20001851 - 20002012
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnn 101  Q
    |||||||| ||  |||||||||| || ||| |||||| |||||| |||||||||||||||||| ||||||| | |||||| ||| |||||||||||        
T  20001851 ccccttatattctcaaaaagttgcgactatggcccctgttttggaacacgtggcgtcttctcaacaattttgggatgaaaaggggcaaaattgcta-ttt 20001949  T
Q  102 nnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
        |||||||||||||||| |||||||||| |||| || |||| |||||||| ||||||||||    
T  20001950 ttttaatagggggccaaaatcgcaacattttgaaactta-ggggagaaaagtgcagtttagcct 20002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 27852997 - 27853061
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  27852997 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctatatt 27853061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 1743390 - 1743555
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| ||| |  |||  | |||||||||| ||||||||||||||||||||||   |  ||||||   ||||||||||       
T  1743390 accccttatcttctcaaaaagttgcgataagggccattgttttgggacatgtggcgtcttctcagcaattttgtgacaaaagggactaaaattgctattt 1743489  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||| ||||||| ||||||||||||||| ||||| |||||||||| |||||||||||    
T  1743490 tttataataggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagccta 1743555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 25179636 - 25179575
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||    
T  25179636 aatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcctat 25179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 33279745 - 33279585
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    ||||||| ||||||||| |||  ||||||  ||| ||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||| |         
T  33279745 cccttatatttacaaaa-gttacgattatgaccctttttttgagacacgtggcgtcttctcagcaatttttggaccaaaggggtcaaaattgcca-tttt 33279648  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
       |||||||| | ||||| ||||||||| ||||| ||  |||||||||||| ||||||||||    
T  33279647 tttaataggggtctaaaatcgcaacatttcaaaacttaaagggcgaaaagtgcagtttagcct 33279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3781019 - 3781099
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaa 81  Q
    |||| ||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  3781019 accctttatctttacaaaaagttgcgaatatgaccccttttttgggacacgtggtgtcttctcagcaattttaggatgaaa 3781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3821023 - 3821103
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaa 81  Q
    |||| ||||||||||||||||||| ||||||  |||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  3821023 accctttatctttacaaaaagttgcgattatgaccccttttttgggacatgtggtgtcttctcagcaattttaggatgaaa 3821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 8339186 - 8339244
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  8339186 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 8339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 26127068 - 26126998
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||||||||||||| |||||| ||| ||||||| ||||  ||||||||||||||||||||||    
T  26127068 ccccttatctttacaaaaagttgcgattatggcctctttttttggacttgtggcgtcttctcagcaatttt 26126998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22416475 - 22416568
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||| |||||||||||||||||||  |||||  |||||| |||||||||||||||||||||||| ||||||| | | ||| |||| ||||||||    
T  22416475 acccattatctttacaaaaagttgcaattatgaccccttatttgggacacgtggcgtcttctcaacaattttgggacgaagggggccaaaattg 22416568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 31039125 - 31039048
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    ||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||| | ||||| || |||||||    
T  31039125 aaaaagttgcgattatagccccttttttagaacatgtggcgtcttctcagcaatttttggacgaaagaggccaaaatt 31039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 43668571 - 43668640
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||| |||||||||||||| ||||||  ||||| |||||||||| ||||||||||||||||||||||    
T  43668571 cccttatttttacaaaaagttgcgattatgacccctgttttgggacatgtggcgtcttctcagcaatttt 43668640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 22447990 - 22448050
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||||    
T  22447990 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgcagtttaaccta 22448050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 10743467 - 10743408
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||    
T  10743467 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaaagaggagtttagcct 10743408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 26177114 - 26177023
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta 97  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||  ||||| |||||||||||||||| | | ||||  || |||||||||||    
T  26177114 ttatctttacaaaaagttgcgattatggcctcttttttgggacttgtggcttcttctcagcaattttgggacgaaataggccaaaattgcta 26177023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 48907537 - 48907596
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||    
T  48907537 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 48907596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 3329059 - 3329117
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  3329059 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 3329117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 23320506 - 23320655
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    ||||||||  ||||||||||  ||||| ||||||||| ||||||| |||||||||| ||||||||||| | | |||||||| ||||||||  |           
T  23320506 cttatcttctcaaaaagttgctattatggcccctttt-tgggacatgtggcgtcttttcagcaattttgggacgaaaggggccaaaattgtaattttttt 23320604  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtga 155  Q
     ||||||||  |||||| ||||||||||||||| ||| || ||||||||||    
T  23320605 taataggggatcaaaatcgcaacattttaaaacttagtggtcgaaaagtga 23320655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 4522012 - 4521952
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||| ||||    
T  4522012 aatagggggccaaaatcgcaacattttaaaacttatagggcgaaaagtgaagtttaaccta 4521952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 26628271 - 26628331
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||| ||||||||||||||    
T  26628271 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagccta 26628331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 36311292 - 36311444
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||| ||||| |||||  |||| | |||||||||||||||| |||||||| ||||||| | | |||||||| ||||||||| |       
T  36311292 accccttatcttctcaaatagttgcgattacggcccatattttgggacacgtggcttcttctcaacaattttgggacgaaaggggccaaaattgccattt 36311391  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagt 153  Q
         |||||||| |||||||  ||||||||| |||| ||||  |||||||||    
T  36311392 ttttaaataggggaccaaaatcacaacattttgaaacttaggaagcgaaaagt 36311444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 40836424 - 40836484
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||| || |||||||||||    
T  40836424 aatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagccta 40836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8542668 - 8542609
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||| ||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  8542668 aatagggggtcaaaattgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 8542609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 23428865 - 23428920
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||    
T  23428865 aatagggggccaaaattgtaacattttgaaacttagggggcgaaaaatgaagttta 23428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 36311205 - 36311150
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||    
T  36311205 ggggccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagccta 36311150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 13080952 - 13080894
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||| |||||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  13080952 aatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 20626880 - 20626794
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaat 92  Q
    ||||||||||||||||||  ||||||  | |||||||||||||| |||||||||||| | ||||||| ||  |||||||| ||||||    
T  20626880 ttatctttacaaaaagttacgattatgactccttttttgggacatgtggcgtcttcttaacaattttggagcgaaaggggccaaaat 20626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 46387744 - 46387650
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    ||||||||||||| |||||| | |  ||||| ||||||||||||| |||| ||||||||||||| |||||||   |||||| ||| |||||||||    
T  46387744 accccttatctttccaaaaactagcaattatggccccttttttggaacacatggcgtcttctcatcaattttgagatgaaatgggccaaaattgc 46387650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 33279830 - 33279890
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||  ||| |||||||    
T  33279830 aatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaagttcagtctagccta 33279890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 4775907 - 4775852
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
    |||||||||||||||||||||||||| |||| ||| ||| |||||||| |||||||    
T  4775907 atagggggccaaaattgcaacattttgaaacttagagggtgaaaagtgtagtttag 4775852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32463583 - 32463516
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    |||||||||||||||||||| |||| |||| |  ||| ||||||||||||||||||| ||||||||||    
T  32463583 accccttatctttacaaaaaagttgcgattttgaccctttttttgggacacgtggcggcttctcagca 32463516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48860843 - 48860938
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    |||||||||||||||||||||||| |||||| | ||| ||| | ||| |||||||| |||||| || |||||| | ||||||  ||||||||||||    
T  48860843 accccttatctttacaaaaagttgcgattatgatcccttttctgggggcacgtggcatcttctgagtaattttgggatgaaaatggtcaaaattgc 48860938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 5001256 - 5001190
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||||||||||| ||||| ||| |||||||  |||||||| | |||||||||| ||||||    
T  5001256 tagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctattttttat 5001190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 22500840 - 22500898
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||||||||||||||||||  ||  ||| ||||||||||||||||||    
T  22500840 aatagggggtcaaaattgcaacattttaaaatttaaagggtgaaaagtgaagtttagcc 22500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 25336409 - 25336351
Alignment:
Q  113 ggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattt 171  Q
    |||||||||||||||||||| |||  || ||||||||||||| ||||||||| ||||||    
T  25336409 ggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaatattt 25336351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 33105096 - 33105178
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta 97  Q
    |||||||||  ||||||  ||| | ||||||||||||||||||||||||| ||||||| | ||||||  || |||||||||||    
T  33105096 caaaaagtttcgattatttcccatgttttgggacacgtggcgtcttctcatcaattttgggatgaaataggccaaaattgcta 33105178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 48860762 - 48860704
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| |||| ||||||| |||||||||||||| ||||||||| |||||| |||||||||    
T  48860762 aataaggggtcaaaattacaacattttaaaacttagggggcgcaaagtggagtttagcc 48860704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 19984906 - 19984846
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||||||||||||||  |||| |||| ||||||| |||||||| | ||||||||||    
T  19984906 atagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctat 19984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 30155389 - 30155449
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||||||| | ||||||||||||    
T  30155389 aataggggatcaaaatcgcaacattttaaaacttagagggcgaaaaataaagtttagccta 30155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 32960856 - 32960921
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttatg 175  Q
    |||||||| ||||||| |||||||||| |||| |    ||||||||||||||||||||||| ||||||||    
T  32960856 aataggggaccaaaatcgcaacattttgaaactt----ggcgaaaagtgaagtttagcctaaattttatg 32960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 22776856 - 22776923
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||||||||||||| || | |||  ||||||  |||||||| | |||||||||||||||||    
T  22776856 atagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcctatattttat 22776923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 26723904 - 26723963
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||||||||||||   |||| |||||||| |||| || ||||||||||    
T  26723904 aatagggggccaaaattgcaacattagtaaacttagggggccaaaactgtagtttagcct 26723963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 48743279 - 48743228
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    |||||||||||||| |  |||||||||||||||| |||||| ||||||||||    
T  48743279 aaaaagttgtgattttgaccccttttttgggacatgtggcggcttctcagca 48743228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 2683091 - 2683153
Alignment:
Q  3 cccttatctttacaaaaag-ttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||||||||||||  ||| |||||| ||||||||||||||||||| || | |||||||    
T  2683091 cccttatctttacaaaaaaattgcgattatggccccttttttgggacacgcggtggcttctca 2683153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 46673292 - 46673350
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||| ||||||||| ||||| || ||||||||||||| | |||||||    
T  46673292 aatagggggtcaaaatcgcaacatttgaaaacttaaggggcgaaaagtggactttagcc 46673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 50296264 - 50296202
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    |||||||||||||||||||||| |||  |||| || ||||| ||||||| | |||||||||||    
T  50296264 aatagggggccaaaattgcaacttttgcaaacttaaggggcaaaaagtgcattttagcctata 50296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 50380211 - 50380149
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
    |||||||||||||| ||||| | ||||||||||| |||| ||||||| | || ||||||||||    
T  50380211 tagggggccaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcctatatt 50380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 14076459 - 14076422
Alignment:
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  14076459 aaaattgcaacattttaaaacttagggggcaaaaagtg 14076422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 40630625 - 40630686
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||||||||||||||| |||  |||| |||||||  ||||||| | ||||||||||    
T  40630625 aatagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcctat 40630686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 48860930 - 48860979
Alignment:
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||| | |||||||||||  |||||||| ||||||||||    
T  48860930 caaaattgcaacattatgaaacataggggatgaaaagtgcagtttagcct 48860979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 51038834 - 51038899
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    |||||||| |||||||||||| ||||||||  || |||  |||||||| | |||||||||||||||    
T  51038834 atagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctatatttt 51038899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 52276358 - 52276301
Alignment:
Q  110 gggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||||| ||||| |||| ||| |||||||| |||||||| | ||||||||||    
T  52276358 gggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctat 52276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 6248453 - 6248501
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||||| |||  |||| |||||||| |||||||    
T  6248453 aatagggggccaaaattgcaacttttgcaaacttagggggcaaaaagtg 6248501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 22416390 - 22416327
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
    ||||||||  ||||||||||||||| |||||| || |||||||||||||  ||||||||| ||||    
T  22416390 aataggggatcaaaattgcaacattataaaactta-ggggcgaaaagtgttgtttagcctttatt 22416327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 28263158 - 28263214
Alignment:
Q  110 gggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||| ||||| ||||||||  ||||||| |||||||| | |||||||||    
T  28263158 gggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagccta 28263214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 52281594 - 52281650
Alignment:
Q  110 gggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||| ||||| |||| ||| |||||||| |||||||| | |||||||||    
T  52281594 gggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagccta 52281650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 2212 - 2047
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta-nn 99  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  2212 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctattt 2113  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2112 ttttttaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 2294 - 2355
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    |||||||||||||||| ||||| ||||||||| |||  ||||||||||| | |||||||||||    
T  2294 aatagggggccaaaatcgcaac-ttttaaaacttagaaggcgaaaagtggactttagcctata 2355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 2132 - 2296
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  2132 accccatatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgcta-tt 2230  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  2231 tttttaatagagggccaaaattgcaacattttaaaacatggggggcgaaaagtgcagtttagccta 2296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 2055 - 1997
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||    
T  2055 aatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtaaagtttagcc 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 2e-54; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 19391550 - 19391383
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  19391550 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctattt 19391451  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatat 169  Q
         |||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  19391450 tttttaataggggaccaaaattgcaacattttgaaacata-ggggcgaaaagtgcagtttagcctatat 19391383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 5192430 - 5192271
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||           
T  5192430 cttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaattgcta-tttatt 5192332  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5192331 taatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcct 5192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4807763 - 4807596
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||| | | |||||||||||       
T  4807763 accccttatctttacaaaaagttgcgattatggccccttttttggaacacgtggcgtcttctcagtaatttttggatgaaatgtgccaaaattgctattt 4807664  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
         ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  4807663 tttttaatagggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcctata 4807596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 33895515 - 33895679
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||||       
T  33895515 accccttatctttacaaaaagttgcaattatggccctttttttgg-acacgtggcgtcttctcagaaatttttggatgaaaggggccaaaattgctattt 33895613  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  33895614 tttttaataggggaccaaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagccta 33895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12723424 - 12723264
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||       
T  12723424 acccgttatctttacaaaaagttgcgattatggtcccttttttgggacacatggcgtcttctcagcaatttttgcatgaaaggggccaaaattgctattt 12723325  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
         ||||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||    
T  12723324 tttttaatagggggtcaaaattgcaacgttttgaaacatagggggtgaaaagtgcagttta 12723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 19924406 - 19924570
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||| | |       
T  19924406 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttttgataaaaggggccaaaattacaattt 19924505  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  19924506 tttttaataaggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcct 19924570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23565230 - 23565397
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||   ||| |||||||||||||||||||||||| |||||||||| ||||||||  |       
T  23565230 accccttatctttacaaaaagttgcgattatggcccttttttttaaacatgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgtcattt 23565329  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
         ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  23565330 tttttaatagggggtcaaaattgcaacattttaaaacatagggggcgaaaagtctagtttagcctata 23565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 8802563 - 8802398
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  8802563 accccttatctttacaaaaagttgcgattatggccccttttttggaacatgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattt 8802464  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||||||||||||| ||| ||||||||| | |||||||||    
T  8802463 tttttaatagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagccta 8802398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 22452332 - 22452176
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||| | |           
T  22452332 cttatctttacaaaaagttgcgaatatagccctttttttgggacacgtggcgtcttctcagcaattttgggacgaaatgggccaaaattaccattttttt 22452233  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
     |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  22452232 taatagggggctaaaattgcaacattttaaaatatagggggcgaaaagtgcagttta 22452176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30784427 - 30784268
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||| | |||||||||||||||||| ||||| |||| ||||||||| |       
T  30784427 accccttatctttacaaaaagttgcgattatggccc-ttttttgggacacgtgacttcttctcagcaatttttggatgaatggggccaaaattgccattt 30784329  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
         |||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||    
T  30784328 tttttaataggggaccaaaattgcaacattttgaaacctagggggcaaaaagtgaagttta 30784268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 17648384 - 17648548
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| | |||||||||       
T  17648384 accccttatctttacaaaaagttgcgattatggccccctttttaggacacgtggcctcttctcagcaatttttggatgaaagggg-ccaaattgctattt 17648482  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||| || ||||||| ||||||||||| ||| ||||||||||||||||| || ||||||||    
T  17648483 tttttaataaggagccaaaactgcaacattttgaaagatagggggcgaaaagtgcagattagccta 17648548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4519030 - 4518867
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||   ||| |||||| ||||||||| |       
T  4519030 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaattttgagatg-aaggggccaaaattgcca-tt 4518933  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||||    
T  4518932 tttttaatagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagccta 4518867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38630196 - 38630346
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||   ||||| |||| ||||||||| |       
T  38630196 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttgagatgaagggggccaaaattgccattt 38630295  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaa 151  Q
         ||||||||| |||||| |||||||||||||||||||  ||||||||    
T  38630296 tttttaatagggggtcaaaatcgcaacattttaaaacatagaaggcgaaaa 38630346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 44147112 - 44147276
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||| || ||||||||||||||||||||| | || || | || ||||||||  |       
T  44147112 accccttatctttacaaaa-gttgcgattatgaccccttttttgggatacatggcgtcttctcagcaattttgggataaaggaggccaaaattgtcattt 44147210  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||| ||||| ||||||| ||||||||||||| | |||||||||    
T  44147211 tttttaatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagccta 44147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 39 - 166
Target Start/End: Complemental strand, 21929972 - 21929845
Alignment:
Q  39 tttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacattttaaaaca 138  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |        ||||||| |||||||| ||||| |||| |||||    
T  21929972 tttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgcaattttttttaatagggagccaaaatcgcaacgttttgaaaca 21929873  T
Q  139 tagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||| || | |||||||||    
T  21929872 tagggggcgaaaaatgcactttagccta 21929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7117277 - 7117184
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||||||| ||||||||||||||||| |||| | | |||||||| ||||||||    
T  7117277 accccttatctttacaaaaagttgcaattatggccctttttttgggacatgtggcgtcttctcagcagttttaggacgaaaggggccaaaattg 7117184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18253049 - 18252960
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaa 90  Q
    ||||||||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| | | |||||||| ||||    
T  18253049 accccttatcttctcaaaaagttgtgattatggccactgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggggccaaa 18252960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 18881666 - 18881502
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  |||||  |||||| |||||||||| ||| ||||||||| ||||||| | | ||| |||| ||||||||| |       
T  18881666 accccttatctttacaaaaagttgcaattatgaccccttatttgggacacttggtgtcttctcaacaattttgggacgaagggggccaaaattgcca-tt 18881568  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| ||||||||| ||||| || ||| ||||||| | |||||||||||    
T  18881567 tttttaatagggggccaaaatcgcaacatttcaaaacttaagggtcgaaaagcgcagtttagccta 18881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 15869487 - 15869347
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaa-ggggtcaaaattgctannnnnnnnaatagggg 113  Q
    |||||||||| ||||||  ||||| ||||||||||||||||| ||||||||||||||| |||||||| |||| |||||||   |        ||||||||    
T  15869487 caaaaagttgcgattatgacccctgttttgggacacgtggcgacttctcagcaattttagaatgaaagggggccaaaattatcattttgtttaatagggg 15869388  T
Q  114 gccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
     ||||||| ||||||||||||||  ||| ||||||||||||    
T  15869387 accaaaatcgcaacattttaaaatttagagggcgaaaagtg 15869347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 21666437 - 21666273
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||| | |||||||  ||||| |||||||||||||||||| |||||||||||||||||||||   | ||| |||| ||||||||| |       
T  21666437 accccttatctttagataaagttgcaattatggccccttttttgggacacatggcgtcttctcagcaattttgagacgaagggggccaaaattgccattt 21666338  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||| || |||||  ||||||||  |||| || ||| ||||||||| ||||||||||    
T  21666337 tttttaatagggagctaaaatcacaacatttcgaaacttaagggacgaaaagtgcagtttagcct 21666273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 32400480 - 32400325
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnn 105  Q
    |||||||||||||||||||  |||||  |||||||||||| |||||||| ||||||||||||||||| | ||||||||| | ||| |||| |            
T  32400480 ttatctttacaaaaagttgcaattatgaccccttttttggaacacgtggtgtcttctcagcaattttggtatgaaagggct-aaagttgcca-ttttttt 32400383  T
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    |||||||   |||||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  32400382 aatagggaatcaaaatcgcaacattttaaaacatagagggcgagaagtgcagtttagc 32400325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31268419 - 31268513
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||| ||||||||| |||||||||||||||| | |||||||||||||||| | |||||||||| ||||||||| | | |||||||| ||||||||    
T  31268419 accctttatctttataaaaagttgtgattatgatccccttttttgggacatgcggcgtcttcttagcaattttaggacgaaaggggccaaaattg 31268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3208121 - 3208281
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||   ||||||||| ||||||  ||| |||||||||||||||||||||||||||| |||||| | | |||| | | |||||||| ||       
T  3208121 accccttatcttcttaaaaagttgcgattatgacccattttttgggacacgtggcgtcttctcagtaattttgggacgaaa-gagccaaaattgttattt 3208219  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
         |||||| ||| ||||| ||||| ||||||||| |||||| ||||||||| |||||||    
T  3208220 ttttaaataggaggctaaaatcgcaactttttaaaacttaggggtcgaaaagtgcagtttag 3208281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 19392812 - 19392872
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  19392812 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 19392872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 19924323 - 19924265
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  19924323 aataaggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagcc 19924265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 33895424 - 33895375
Alignment:
Q  115 ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  33895424 ccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 33895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 18881747 - 18881807
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  18881747 aatagggggtcaaaattgcaacattataaaacttagggggcgaaaagtgttgtttagccta 18881807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 21930047 - 21930107
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  21930047 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 21930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 23565179 - 23565119
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  23565179 aatagggggtcaaaattgcaacattttgaaacataaggggcgaaaagtctagtttagccta 23565119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 44147030 - 44146962
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||||||||||| |||||||||| |||| | | |||||||||||||||||||||||  |||||||    
T  44147030 aatagggggccaaaatcgcaacattttgaaacttggagggcgaaaagtgaagtttagccttaattttat 44146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 8802645 - 8802712
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||| |||||||||| ||| ||||    
T  8802645 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtaaagtttagccaataattta 8802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 12723507 - 12723561
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttt 160  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||    
T  12723507 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagttt 12723561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 30784510 - 30784568
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| ||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  30784510 aataaggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41688273 - 41688200
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttg 74  Q
    ||||||||||||  |||||||||| ||||||  ||| | ||||||||||||| | |||||||||||||||||||    
T  41688273 accccttatcttctcaaaaagttgcgattatgacccatgttttgggacacgtagtgtcttctcagcaatttttg 41688200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 4519113 - 4519172
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||| |||||||| |||||||||| |||| ||| || ||||||||||||||||||||    
T  4519113 aatagggagccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 4519172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 5192517 - 5192572
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    ||||| || ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  5192517 aatagaggaccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagttta 5192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 17648301 - 17648242
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||| ||||||||  ||||||||| |||| ||| |||||||||||||||||||||||    
T  17648301 aatagggagccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcct 17648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 1824784 - 1824895
Alignment:
Q  40 ttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacattttaaaacat 139  Q
    ||||||||||||||||||||||||| |||||||   | |||||||| ||||||||           ||||||||||||||||| |||||||||||||| |    
T  1824784 ttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaattgt--ctttttttaatagggggccaaaattacaacattttaaaactt 1824881  T
Q  140 agggggcgaaaagt 153  Q
    ||||  ||||||||    
T  1824882 agggaacgaaaagt 1824895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 1859229 - 1859340
Alignment:
Q  40 ttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacattttaaaacat 139  Q
    ||||||||||||||||||||||||| |||||||   | |||||||| ||||||||           ||||||||||||||||| |||||||||||||| |    
T  1859229 ttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaattgt--ctttttttaatagggggccaaaattacaacattttaaaactt 1859326  T
Q  140 agggggcgaaaagt 153  Q
    ||||  ||||||||    
T  1859327 agggaacgaaaagt 1859340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 2053197 - 2053141
Alignment:
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    |||||||||||||||||||||| ||| |||||||||| | |||||| |||| |||||    
T  2053197 caaaattgcaacattttaaaacttagagggcgaaaagagtagtttaacctaaatttt 2053141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 7116461 - 7116393
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||| |||||||| ||||||||| ||||| || ||||| ||||||  ||||||||||| |||||||    
T  7116461 aatagggtgccaaaatcgcaacatttcaaaacttaaggggcaaaaagttcagtttagcctaaattttat 7116393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 16233602 - 16233666
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagcccctt-ttttgggacacgtggcgtcttctcagcaa 68  Q
    ||||||||||||||||||||  ||||| ||||| | ||||||||||||||  |||||||||||||    
T  16233602 cttatctttacaaaaagttgcaattatggccccctgttttgggacacgtgatgtcttctcagcaa 16233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41385653 - 41385590
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||| |  ||||||||||||||||| || ||| | |||||||||||||||| ||||||    
T  41385653 accccttatcatctcaaaaagttgtgattatggcacctgtcttgggacacgtggcgtattctca 41385590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 21666519 - 21666577
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| ||||  ||||||| ||||||| |||| ||||    
T  21666519 aatagggggccaaaatcgcaacattttgaaactaagggggcaaaaagtgcagttcagcc 21666577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 17813083 - 17813010
Alignment:
Q  17 aaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaa 90  Q
    |||||||| ||||||  || |||||||| |||||||||  |||| ||| ||||||| ||| |||||||||||||    
T  17813083 aaaagttgcgattatgacctcttttttgagacacgtggtatcttttcaacaattttggaacgaaaggggtcaaa 17813010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 18252461 - 18252393
Alignment:
Q  106 aatagggggccaaaattgcaacatttta--aaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    ||||||||| |||||| ||||||||||   |||| ||||||||||||| ||  ||||||||||||||||    
T  18252461 aatagggggtcaaaatagcaacatttttttaaacttagggggcgaaaaatgttgtttagcctatatttt 18252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 31947910 - 31947845
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||| ||||| ||| |||| ||||||||| ||||||| | || ||||||| |||||    
T  31947910 tagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctatgtttta 31947845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 34602069 - 34602024
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||||||||||| ||||| |||| |||||||||||| ||||||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaagtg 34602024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 132538 - 132586
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||  ||| | |||||||||||||||||||||||| |||||||    
T  132538 aaaaagttgcaattttggccccttttttgggacacgtggcggcttctca 132586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 4807847 - 4807907
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||  |||| |||||||||| |||| ||   |||||||||||||||||||||||    
T  4807847 aatagggggcataaatcgcaacattttgaaacttaaaaggcgaaaagtgaagtttagccta 4807907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 22452419 - 22452479
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| |||| ||||| |||  |||||||| ||||||| |||||||||||    
T  22452419 aataggggaccaaaatcgcaatattttgaaatttagggggctaaaagtggagtttagccta 22452479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 27453534 - 27453594
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatat 169  Q
    |||||||||||||  |||| |||| |||||||||||| |||||||| | || |||||||||    
T  27453534 agggggccaaaatcacaactttttgaaacatagggggtgaaaagtgcatttaagcctatat 27453594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30199504 - 30199570
Alignment:
Q  1 accccttatctttac--aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagc 66  Q
    |||||||||||||||  |||||||||||||| | | ||| |||||||||||||||||| ||| |||||    
T  30199504 accccttatctttacaaaaaaagttgtgatt-ttgacccctttttgggacacgtggcggcttttcagc 30199570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 32400576 - 32400624
Alignment:
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||| ||||||||||||  |||||||||||||||  |||||||||    
T  32400576 caaaattgtaacattttaaaatttagggggcgaaaagtagagtttagcc 32400624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 3e-53; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3616940 - 3617102
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||       
T  3616940 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaattgcta-tt 3617038  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3617039 tatttaatagggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 3617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 24196402 - 24196566
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |       
T  24196402 accccttatctttacaaaaagttgcgaatatggccccttttttgggacacgtggcgtcttctcagcaatttttggacgaaaggggccaaaattgccattt 24196501  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  24196502 tttttaatagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcct 24196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24962094 - 24962257
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||       
T  24962094 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttttgatgaaagggaccaaaattgctattt 24962193  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  24962194 tttttaatagggggccaaaactgcaacattttgaaacatagggggcgaaaagtacagtttagcc 24962257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4059685 - 4059521
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  4059685 accccttatctttacaaaaagttgcgattatggtccattttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcaattt 4059586  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  4059585 tttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 4059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19078088 - 19077926
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |       
T  19078088 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgcca-tt 19077990  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||| | ||||||  |||||||||||||||||||| ||||||||| |||||||||    
T  19077989 tttttaataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagcc 19077926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19125978 - 19125816
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |       
T  19125978 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgcca-tt 19125880  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||| | ||||||  |||||||||||||||||||| ||||||||| |||||||||    
T  19125879 tttttaataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagcc 19125816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 48472026 - 48471864
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  48472026 accccttatctttacaaaaagttgcgattatggtcccttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattt 48471927  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         |||||||||||||||| |||||||||| ||||||||||| ||||||||| | ||||||    
T  48471926 tttttaatagggggccaaaatcgcaacattttgaaacataggggacgaaaagtgcactttagc 48471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43706817 - 43706655
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||  |||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  43706817 accccttatctttacaaaaagttgcgattatgaccccttttccgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctattt 43706718  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         |||||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  43706717 tttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 46432379 - 46432213
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||  ||||||||| | |||||||||| |||||||||||       
T  46432379 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaattgctattt 46432280  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         |||||||||||||||| |||||||| | ||||||||||||||||||||| | ||||||||||    
T  46432279 tttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcctat 46432213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 27093015 - 27092851
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||| | |||||| ||| ||||||||| |       
T  27093015 accccttatctttacaaaaagttgcaattatggccccttttttggaacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattgccattt 27092916  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||| ||||||||||| | |||||||| ||||||||||||||| ||||| |||||||||||    
T  27092915 tttttaata-ggggccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagccta 27092851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 51719285 - 51719121
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| || || ||||||| |||||| ||||||||| |||||||||||  |||||||||||       
T  51719285 accccttatctttacaaaaagttgcgattatgaccccttttctgagatacgtggcatcttctgagcaattttggaatgaaagggaccaaaattgcta-tt 51719187  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||    
T  51719186 tttttaatagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagccta 51719121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 2425367 - 2425529
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    |||||||||||||||||||||| ||||||  ||| |||| ||||||||||||| |||||| ||||||||| | |||||| ||| |||||||||||         
T  2425367 cccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaatgggccaaaattgcta-tttt 2425465  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
       |||||||||||||||| |||||||| | ||||||||||||| ||||||| |||||||||||    
T  2425466 tttaatagggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagccta 2425529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 29676220 - 29676373
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||  |||||||||| |||||||| ||       
T  29676220 accccttatctttataaaaagttgcgattatggccccttttttgggacacgtggcgccttctcaacaattttttgatgaaaggggccaaaattgttattt 29676319  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         |||| | | |||||||| |||||||||||||||||| || |||||||||    
T  29676320 tttttaatatgagaccaaaattacaacattttaaaacatagaggacgaaaagtg 29676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28920820 - 28920727
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagcccc-ttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    |||||||||||||||||||||| | |||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  28920820 accccttatctttacaaaaagtggcgattatggcccccttttttgggacatgtggcgtcttctcagcaatttttggatgaaaggggtcaaaatt 28920727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24749939 - 24750033
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    |||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||    
T  24749939 accccttatctttacaaaaagttgcgattatggcccattttttggaacacgtggcgtcttcttagcaatttttagatgaaaggggccaaaattgc 24750033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16551806 - 16551645
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| |||| | ||||||||||||||||||||||||||||||||| | | |||||| | ||||||| | |       
T  16551806 accccttatcttctcaaaaagttgcgattatggcccttgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggtgccaaaattacca-tt 16551708  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         ||||||||||||||||||||||||||| |||| ||| |||||||||||| || |||||    
T  16551707 tttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgcagattagc 16551645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2657675 - 2657513
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||  ||||||||||||||||  ||| |||||| ||||||||||||| |||||| ||||||| | |  ||||||| ||||||||| |       
T  2657675 accccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaattttgggacaaaaggggccaaaattgcaattt 2657577  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||| ||||| ||||||||||||||| ||  ||||||||||||||||| ||||    
T  2657576 tttttaatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 2657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 24750020 - 24750074
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24750020 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 24750074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 50334776 - 50334719
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  50334776 aatagggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 16972025 - 16972156
Alignment:
Q  34 ccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacatttta 133  Q
    ||||| ||||||||||| |||||| |||| ||||||||| ||| |||| ||| |||||||| |         |||||||||| ||||| |||||||||||    
T  16972025 cccctattttgggacacatggcgttttcttagcaattttggaacgaaatgggccaaaattg-tcatttttttaatagggggctaaaatcgcaacatttta 16972123  T
Q  134 aaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||| |||||||||||||||| |||||||||||    
T  16972124 aaacttagggggcgaaaagtgcagtttagccta 16972156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 28920897 - 28920957
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  28920897 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagccta 28920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 21148121 - 21148248
Alignment:
Q  34 ccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacatttta 133  Q
    |||||||||||||||||||||||| ||||||||| |||| | | |||||||| || |||||  |        |||||||||||||||| |||||||||||    
T  21148121 ccccttttttgggacacgtggcgttttctcagcagttttgggacgaaaggggccataattgtaattttttttaatagggggccaaaatcgcaacatttta 21148220  T
Q  134 aaacatagggggcgaaaagtgaagttta 161  Q
    |||  |||||| ||||||||| ||||||    
T  21148221 aaatttaggggtcgaaaagtgcagttta 21148248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 24196319 - 24196254
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattt 171  Q
    ||||| |||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  24196319 aatagagggccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttagcctatattt 24196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2260541 - 2260378
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||| |  |||||||||||||| ||||||||||||||||| |||||| ||| |||| ||  ||||||||  |       
T  2260541 accccttatcttctcaaaaagttgcgattctgaccccttttttgggatacgtggcgtcttctcagtaattttagaacgaaatggaccaaaattgtaattt 2260442  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||| ||  ||||||| ||||||||||||||| || ||| ||||||||| | |||||||    
T  2260441 tttttaataaggaaccaaaatcgcaacattttaaaacttaagggtcgaaaagtgcactttagcc 2260378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 3616857 - 3616798
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||    
T  3616857 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 3616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 24962011 - 24961945
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  24962011 aatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcctatttttt 24961945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 29676137 - 29676075
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    |||| |||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  29676137 aatatggggcctaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctata 29676075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 4059768 - 4059828
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||| ||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  4059768 aatagggggctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 4059828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 16858472 - 16858536
Alignment:
Q  2 ccccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcag 65  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||| ||||||||    
T  16858472 ccccttatctttacaaaaaagttgcgattatggccccttttttgggacatgtggcggcttctcag 16858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 19078169 - 19078228
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| || |||||||    
T  19078169 aatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcct 19078228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 19126059 - 19126118
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| || |||||||    
T  19126059 aatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcct 19126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29182163 - 29182092
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||  || ||||||| |||||| |||| ||||||| ||||||| |||||||||||||||||||    
T  29182163 accccttatcttctcataaagttgcgattatggcccattttttgagacacgttgcgtcttctcagcaatttt 29182092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47685242 - 47685313
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||| ||||||||||||||| ||| ||  || ||||||| |||||||||||||||||| |||||||||    
T  47685242 accccttacctttacaaaaagttgcgataatgacctcttttttaggacacgtggcgtcttcttagcaatttt 47685313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 43706899 - 43706957
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||||| |||||||||    
T  43706899 aatagggggccaaaatcgcaacattttaaaaattagggggcaaaaagtggagtttagcc 43706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18606846 - 18606777
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatt 70  Q
    ||||||||||||  |||||||||||||||||  ||| | ||||||||||||| |||||| ||||||||||    
T  18606846 accccttatcttctcaaaaagttgtgattatcacccttgttttgggacacgtagcgtctgctcagcaatt 18606777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22786171 - 22786239
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||  ||||||||||||||    |||||| ||||||||||| |||||||||||||||||||||    
T  22786171 accccttatcttctcaaaaagttgtgatg---gcccctgttttgggacacttggcgtcttctcagcaatttt 22786239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 30936514 - 30936575
Alignment:
Q  7 tatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaa 68  Q
    |||||||||||||||||||||||||||||| | | |||||| | ||||| ||||||||||||    
T  30936514 tatctttacaaaaagttgtgattatagcccatgtcttgggatatgtggcttcttctcagcaa 30936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 4455201 - 4455045
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    ||||||||  |||||||||| |||||| |||  |||||||||||| ||||| |||||||||||||||| | | ||||  |  ||||||||  |           
T  4455201 cttatcttctcaaaaagttgcgattatggccatttttttgggacatgtggcatcttctcagcaattttgggacgaaaaagaccaaaattgtaattttttt 4455102  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
     |||| || || ||||| ||||||||||||||| |||||| ||||||||| ||||||    
T  4455101 taataaggagctaaaatcgcaacattttaaaacttaggggtcgaaaagtgcagttta 4455045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 18606929 - 18606989
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| ||||||  |||||||||||||| |||||| ||||||||| |||||||||||    
T  18606929 aatagggggtcaaaatcacaacattttaaaacttaggggtcgaaaagtgtagtttagccta 18606989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 46432462 - 46432520
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| || ||||||||||||| | |||||||    
T  46432462 aatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggactttagcc 46432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9554364 - 9554223
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| || ||| |||||| ||||| ||||||||||| ||||||  ||||||| | | |||||  | |||||||||||       
T  9554364 accccttatcttctcaaaaagttgcgactatggcccctgttttgagacacgtggcgccttctctacaattttgggacgaaagaagccaaaattgctattc 9554265  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagg 142  Q
         |||||| ||||||||| | |||||||| |||| ||||    
T  9554264 tttttaataggaggccaaaatcgaaacattttgaaacttagg 9554223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 26605436 - 26605356
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaagggg 85  Q
    ||||| |||||||||||||  ||||||   |  ||||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  26605436 cttatttttacaaaaagttacgattatgatcgattttttgggacacgtagcgtcttcttagcaattttggaataaaagggg 26605356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 28552363 - 28552315
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||| ||||||| |||||||||| |||| ||||||||||||||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtg 28552315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31084775 - 31084695
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaa 81  Q
    |||||||||||||||||||||||  ||||||  |||| ||||||||||| |||| |  |||||| ||||||| ||| ||||    
T  31084775 accccttatctttacaaaaagtttcgattatgaccccctttttgggacatgtggggctttctcaacaattttggaacgaaa 31084695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 43914965 - 43914917
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  43914965 aatagggggccaaaattgcaacctttgcaaacttagggggcgaaaagtg 43914917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 2657762 - 2657817
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||| |||||| |||| ||||| |||| |||||||||||||||| |||||||||||    
T  2657762 ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagccta 2657817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 14601738 - 14601797
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||  | ||||||||||    
T  14601738 aatagggggtcaaaatcgcaacattttaaaacttagggggtgaaaaacgcagtttagcct 14601797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21185345 - 21185415
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||| ||||||  |||||||||| |||||| | ||||||||||| ||||| |||| |||||||||||||||    
T  21185345 accccctatcttctcaaaaagttgcgattat-gacccttttttggaacacgaggcggcttctcagcaatttt 21185415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 28919073 - 28919014
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||| ||||||||||| ||||||||| |||||||| |||| ||||||  ||||||||||    
T  28919073 aatagagggccaaaattacaacattttgaaacatagagggcaaaaagtacagtttagcct 28919014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 10684852 - 10684794
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||| | ||||||||||||||||||||| || |||||||||| |  |||||||||    
T  10684852 aataggggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagcc 10684794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 50503757 - 50503699
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||| ||||| | |||||||||||||| | ||||||||| || ||||||    
T  50503757 tagggggccaaaatcgcaacttcttaaaacataggggaccaaaagtgaaattaagccta 50503699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 18106870 - 18106817
Alignment:
Q  3 cccttatctttacaaaaag-ttgtgattatagccccttttttgggacacgtggc 55  Q
    ||||||||||| ||||||  ||| |||||| |||||||||||||||||||||||    
T  18106870 cccttatctttgcaaaaaaattgcgattatggccccttttttgggacacgtggc 18106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 28552594 - 28552639
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaa 151  Q
    ||||||||||||||||  |||||||||||||| |||||||| ||||    
T  28552594 aatagggggccaaaatcacaacattttaaaacttagggggcaaaaa 28552639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 30107064 - 30107109
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||| |||||||||||||||||  |||| ||||||||||||||||    
T  30107064 aggggaccaaaattgcaacatttgcaaacttagggggcgaaaagtg 30107109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 31084672 - 31084615
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||| ||||||| |||| |||||||||| || | ||||||||||| ||||||||||    
T  31084672 taggggaccaaaatcgcaatattttaaaacttaagaggcgaaaagtgtagtttagcct 31084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 50334811 - 50334848
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggg 144  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  50334811 atagggggccaaaattacaacattttgaaacatagggg 50334848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 51684423 - 51684366
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||| ||||||||  || |||| |||||||| | |||||||    
T  51684423 atagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 5971144 - 5971084
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||| ||||||||||| |||  |||| |||||||| ||||||| | |||||||||    
T  5971144 aatagggggctaaaattgcaacttttgcaaacttagggggcaaaaagtgcattttagccta 5971084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 16551891 - 16551927
Alignment:
Q  138 atagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  16551891 atagggggcgaaaagtgcagtttaacctatattttat 16551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 16878931 - 16878987
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
    |||||||| |||||||  ||||||||| |||| |||| ||||||||||| |||||||    
T  16878931 aataggggaccaaaatctcaacattttgaaacttaggtggcgaaaagtgcagtttag 16878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 35067046 - 35067106
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||||||||| ||||| |||| |||| || |||| |||||||| | ||||||||||    
T  35067046 atagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcctat 35067106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 48472113 - 48472165
Alignment:
Q  112 gggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| |||||||||| ||||| |||| ||| ||||||||||||| ||||||||    
T  48472113 gggctaaaattgcaatattttgaaacttagagggcgaaaagtgatgtttagcc 48472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 51719366 - 51719426
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||| |||||||| |||||||||| |||| |||| | | ||||||| |||||||||||    
T  51719366 aatagggagccaaaatcgcaacattttgaaacttaggtgacaaaaagtggagtttagccta 51719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 4e-52; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 18537991 - 18537827
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  18537991 accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgcta-tt 18537893  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18537892 tttttaataggggaccaaaattgcaacattttaaaacataggggacgaaaagtgcagtttagccta 18537827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 30714437 - 30714273
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| |       
T  30714437 acccgttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcca-tt 30714339  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||    
T  30714338 tttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccta 30714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15735205 - 15735367
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||| |       
T  15735205 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaattgccattt 15735304  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15735305 ttttaaa-aggggaccaaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcc 15735367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38716334 - 38716496
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||       
T  38716334 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctattt 38716433  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
          |||||||| ||||||||||||||||| ||||||||| || |||||||| |||||||||    
T  38716434 ttttt-atagggggtcaaaattgcaacattttgaaacataggaggtgaaaagtgcagtttagcc 38716496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9787700 - 9787861
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  |       
T  9787700 accccttatctttacaaaaagttacgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgtca--t 9787797  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  9787798 tttttaatagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagcc 9787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11176048 - 11176218
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |       
T  11176048 accccttatctttacaaaaagttgtgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaagggatcaaaattgccattt 11176147  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattt 171  Q
         ||||||||| |||||| |||||||||| ||||||||| ||| ||||||| | ||||||||| ||||    
T  11176148 tttttaatagggggtcaaaatcgcaacattttgaaacataggaggccaaaagtgcactttagcctaaattt 11176218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 17368357 - 17368518
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||       
T  17368357 accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcaacattttttggatgaaaggggccaaaattgcta-tt 17368455  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  17368456 tttttaata-ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgttgtttagcc 17368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 25298962 - 25298811
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||||| | ||||| |||| ||||||||| |         
T  25298962 cccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcaacaattttgggatgaagggggccaaaattgcaattttt 25298863  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
       |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  25298862 tttaataggaggccaaaatcgcaacattttaaaacatagggggcgaaaagtg 25298811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2986827 - 2986996
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  2986827 accccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaattttgggatgaagggggccaaaattgccattt 2986926  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
         |||||||||||||||| |||||||||| |||||||| | | |||||||| | |||||||||||||    
T  2986927 tttttaatagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagcctatatt 2986996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 22191187 - 22191347
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||         
T  22191187 accccttatctttacaaaaagttacgattat-gacccttttttgggacacgtggcgccttctcagcaattttgggatgaaaggggccaaaattgcctttt 22191285  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
         |||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  22191286 tttttaataggggaccaaaattgcaacattttgaaacataggaggcgaaaagtgtagtttag 22191347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 15700888 - 15701052
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  15700888 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgcta-tt 15700986  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||  |||||| |||||||| | ||||||||||||||||||||| | |||||||||    
T  15700987 ttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 15701052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 6763880 - 6763715
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||| | || ||| ||  ||||||||| |       
T  6763880 accccttatctttacaaaaagtagcgattacggccccttttttgggacacgtggcgtcttctcagcaattttgggataaaatggaccaaaattgccattt 6763781  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||| |||||||  |||||||||||||||||  |||| |||| || |||||||||||    
T  6763780 tttttaataggggaccaaaatcacaacattttaaaacataaagggcaaaaaatgcagtttagccta 6763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 9051186 - 9051028
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||   ||||| |||| ||||||||| |           
T  9051186 cttatctttacaaaaagttgcgattatggccc-ttttttgggacacggggcgtcttctcagcaattttgagatgaagggggccaaaattgccattttttt 9051088  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
     ||||||||  |||||| |||||||||||||||||||| |||||||| || | |||||||    
T  9051087 taataggggatcaaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagcc 9051028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 30714520 - 30714588
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  30714520 aatagggggccaaaattgcaacattttaaaatttagagggcgaaaagtgaagtttagcctatattttat 30714588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 22191103 - 22191037
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  22191103 atagggggccaaaattgcaacattttaaaacataggggacgaaaagtgtagtttagcctaaatttta 22191037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25884340 - 25884176
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| |||||| |||||||||  || | || |||||||||||||| | | |||| ||| ||||||| | |       
T  25884340 accccttatcttctcaaaaagttgcgattattgcccctgttttgggacgtgtagtgttttctcagcaattttgggacgaaaagggccaaaattaccattt 25884241  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||||||||    
T  25884240 tttt-aatagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagccta 25884176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 4104984 - 4104894
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||| |||||||||||||| ||||||  ||||||||| || |||||||||||||||||||||||||| | | |||| ||||||||||||    
T  4104984 ccttatatttacaaaaagttgcgattatgacccctttttaggaacacgtggcgtcttctcagcaattttgggacgaaatgggtcaaaattg 4104894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 9051273 - 9051339
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9051273 aatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcctatatttt 9051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22387231 - 22387141
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagcccc-ttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaa 90  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||   | |||||||||||||    
T  22387231 accccttatctatacaaagagttgtgattatggcccccttttttgggacaagtggcgtcttctcagcaattttgagacgaaaggggtcaaa 22387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28365651 - 28365813
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| ||||||  ||| ||||||||||| | ||||||||||||||||||||| | | |||||||| |||||||| |        
T  28365651 accccttatcttctcaaaaagttgcgattatgaccctttttttgggacgcatggcgtcttctcagcaattttgggacgaaagggggcaaaattgattttt 28365750  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||| ||| |||||||||||||||||| |||| || ||| ||||||||| || ||||||    
T  28365751 tttttaataagggaccaaaattgcaacattttgaaactta-gggtcgaaaagtgcagattagcc 28365813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 9787618 - 9787557
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  9787618 aatagggggtcaaaattgcaacattttaaaacatagggggcgaaaaatgtagtttatcctat 9787557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 18538074 - 18538134
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  18538074 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 18538134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 11175965 - 11175906
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||    
T  11175965 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 11175906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 15735122 - 15735060
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    |||||||| ||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||    
T  15735122 aataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctata 15735060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 15147859 - 15147908
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggc 55  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  15147859 ttatcttaacaaaaagttgcgattatagccccttttttgggacacgtggc 15147908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 4587918 - 4587858
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||  ||||||||||    
T  4587918 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtggtgtttagccta 4587858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 38716252 - 38716192
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  38716252 aatagggggtcaaaatcgcaacattttaaaacttagagggtgaaaagtgaagtttagccta 38716192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 35844859 - 35844922
Alignment:
Q  2 ccccttatctttacaaaa-agttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||||||||||| |||||||||| | |||||||||||||| ||||||||| |||||||    
T  35844859 ccccttatctttacaaaaaagttgtgattttggccccttttttggggcacgtggcggcttctca 35844922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 14743460 - 14743526
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaa 68  Q
    |||||||| ||| |||||| ||| ||||||||||||| ||||||||||||||| | |||||||||||    
T  14743460 ccccttatttttgcaaaaatttgcgattatagcccctattttgggacacgtggtggcttctcagcaa 14743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 25299046 - 25299107
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||| ||||| |||||||||| |||| ||| ||||||||| |||||||||||||||    
T  25299046 aatagggggctaaaatcgcaacattttgaaacttagagggcgaaaattgaagtttagcctat 25299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 15700805 - 15700745
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| ||||||||||||||| || ||||||||||||| | |||||||||    
T  15700805 aataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagccta 15700745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 2986744 - 2986689
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    |||||||||||||||| |||||||||| |||| ||  |||||||||||||||||||    
T  2986744 aatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 6763963 - 6764022
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||| ||||||| |||||||||| |||| ||| ||||||||| |||||||||||||    
T  6763963 aataggggaccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcct 6764022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 21773493 - 21773423
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||   ||||||||| |||| |||||||| || ||||||||||||| |||||||| |||||||    
T  21773493 ccccttatcttctaaaaaagttgcgattttagcccctgttctgggacacgtggcttcttctcaacaatttt 21773423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 36464417 - 36464581
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnn 103  Q
    |||||||||  |||||||||| ||| || |||||||||||| |||||||| | |||||||||||||||| | | |||| ||  |||||||| |           
T  36464417 ccttatcttctcaaaaagttgcgat-atggccccttttttgagacacgtgacatcttctcagcaattttgggacgaaatggaccaaaattg-tcattttt 36464514  T
Q  104 nnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
      |||| |||  |||||| |||||||||| |||| |||| ||||||||||| |||||| ||||||||    
T  36464515 ttaataagggatcaaaatcgcaacattttgaaacttaggaggcgaaaagtgcagtttaacctatatt 36464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26829252 - 26829160
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagcccc-ttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    |||||||||| |  ||||||||||||||||| ||||| |||||||||| |||| ||||||||||| |||||||   | |||||||| |||||||    
T  26829252 accccttatcatctcaaaaagttgtgattatggcccccttttttggga-acgtagcgtcttctcaacaattttgagacgaaaggggccaaaatt 26829160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 52297 - 52361
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    |||||||||||||| ||||  | |||||||||||||||| ||||||| | || ||||||||||||    
T  52297 tagggggccaaaatcgcaaattcttaaaacatagggggccaaaagtgcaattaagcctatatttt 52361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19618937 - 19618881
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcg 56  Q
    |||||||||||||||||||| |||||| ||||  |||||||||||||||| ||||||    
T  19618937 accccttatctttacaaaaaagttgtgtttatgaccccttttttgggacatgtggcg 19618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22699011 - 22698947
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||||||| |||||| ||||||||| |  ||||||||||||||||| ||||| |||||||    
T  22699011 accccttatctttgcaaaaatgttgtgattttgaccccttttttgggacacatggcggcttctca 22698947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 25884434 - 25884482
Alignment:
Q  115 ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    ||||||||||||||||||||||| |||||| |||||| ||| |||||||    
T  25884434 ccaaaattgcaacattttaaaacttaggggacgaaaaatgacgtttagc 25884482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 24607779 - 24607846
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||||||||| |||  |||| |||||||| |||||||   |||||||||| |||||    
T  24607779 aatagggggccaaaattgcaacctttgcaaacttagggggcaaaaagtgtgttttagcctatttttta 24607846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 2190675 - 2190741
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaa 68  Q
    ||||||||||||||||||||||| | ||||  ||| | |||||||||| || ||| |||||||||||    
T  2190675 ccccttatctttacaaaaagttgcggttatgacccatattttgggacatgttgcggcttctcagcaa 2190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 11919788 - 11919854
Alignment:
Q  2 ccccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||||||||||||| |||| |||| |   | |||||||||||||||||||| ||||||||||    
T  11919788 ccccttatctttacaaaaaagttgcgattttgatcacttttttgggacacgtggcggcttctcagca 11919854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 20480133 - 20480087
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||| ||| |||| ||||||||| |||||||    
T  20480133 tagggggccaaaattgcaacttttaaaaatatagggggccaaaagtg 20480087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 21773381 - 21773331
Alignment:
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||| ||||||||||||||| ||||||||  |||||| |||||||||||    
T  21773381 caaaatcgcaacattttaaaacttagggggcagaaagtgcagtttagccta 21773331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 26829332 - 26829390
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||| ||||||||||||||| || |||  |||||||| | ||||||||    
T  26829332 atagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcct 26829390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 29931076 - 29931114
Alignment:
Q  404 agtttggtccacaaacatgtcttctgttagtcagtttag 442  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  29931076 agtttggtccacaaatatgtcttttgttagtcagtttag 29931114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 20126243 - 20126182
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||||||||||||||| |||  |||| |||||||| |||||||   ||||||||||    
T  20126243 aatagggggccaaaattgcaacttttgcaaacttagggggcaaaaagtgcgttttagcctat 20126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 36449834 - 36449769
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||||||  |||| |||  || |||| |||||||| | ||||||||||||||||    
T  36449834 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatatttta 36449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4588002 - 4588042
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagcccctttt 41  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  4588002 accccttatctttacaaaaagttgcgattatgacccctttt 4588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9775525 - 9775461
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    ||||||||||||| |||||| ||||||||| |  |||||||||||||||||  |||| |||||||    
T  9775525 accccttatctttgcaaaaatgttgtgattttgaccccttttttgggacacacggcggcttctca 9775461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 13652202 - 13652250
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||| |||||||| | ||||||||||||||| |||| |||||||||||    
T  13652202 aatagagggccaaactcgcaacattttaaaacttaggaggcgaaaagtg 13652250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 28719373 - 28719329
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaag 152  Q
    |||||||||||||| ||||| | |||||||||||||||| |||||    
T  28719373 tagggggccaaaatcgcaacttcttaaaacatagggggccaaaag 28719329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 32677866 - 32677814
Alignment:
Q  114 gccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||||||||||| |||| |||||||| || | |||||||||    
T  32677866 gccaaaatcgcaacattttaaaacttaggaggcgaaaaatgcactttagccta 32677814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14572341 - 14572182
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||       
T  14572341 accccttatctttataaaaagttgcgattatggccctttttttgggacatgtggcatcttctcagcaatttttggatgaaaggggccaaaattgctattt 14572242  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttt 160  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14572241 tttttaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagttt 14572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18749259 - 18749094
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||| | ||||||||| |||||||||| |||||||||||       
T  18749259 accccttatctttacaaaaagttgtgattatgtccccttttttgggacatgtggcttcttcttatcaatttttgtatgaaaggggccaaaattgcta-tt 18749161  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18749160 tttttaatagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcctat 18749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25819825 - 25819988
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||| | |       
T  25819825 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttttgataaaaggggccaaaattacaattt 25819924  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  25819925 tttttaatagggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcc 25819988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 35102654 - 35102489
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  35102654 accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattt 35102555  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||| ||||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  35102554 tttttaatagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccta 35102489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 18791498 - 18791663
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||| | ||||| |||| ||||||||| |       
T  18791498 acccctcatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaattgccattt 18791597  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacataggggg-cgaaaagtgaagtttagcct 165  Q
         |||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||    
T  18791598 ttttaaatagggggccaaaatcgcaacattttaaaacatagggggacgaaaagtgcactttagcct 18791663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 32451867 - 32452032
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||||||||| |||||||| |        
T  32451867 accccttatctttacaaaaagttgcgattatgaccccttttttgagacatgtggcgtcttctcaacaatttttggatgaaaggggccaaaattgtttttt 32451966  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||| ||||||||||||||||| ||||||||||| | ||||||| |||||||||||    
T  32451967 tttttaatagggggtcaaaattgcaacattttgaaacataggggacaaaaagtgcagtttagccta 32452032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31210935 - 31211029
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||    
T  31210935 accccttatctttacaaaaagttgcgattatagcaccttttttgggacacgtggtgtcttctcagcaattttgggatgaaaggggccaaaattgc 31211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4597568 - 4597400
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||| |||||||||| |||| |||||| |  |||| |||| ||||||||  |       
T  4597568 accccttatctttacaaaaagttgcaattatggccccttttttgggacatgtggcgtcttttcagtaattttgggttgaagggggccaaaattgtcattt 4597469  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatat 169  Q
         |||||||| ||||||| |||||||||| ||||||||||||||||||||| | |||| |||||||    
T  4597468 tttttaataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttatcctatat 4597400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 34834066 - 34834238
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| ||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||| | |||||  ||| ||||||||| |       
T  34834066 acccgttatctttacaaaaagttacaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaagtgggccaaaattgcca-tt 34834164  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
         |||||| || |||||| |||| ||||||||||||| ||||||||||||| | |||||||| | ||||||    
T  34834165 tttttaataggaggtcaaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcctttcttttat 34834238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20863891 - 20863796
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgct 96  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| | ||||||||    
T  20863891 accccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttggaacgaaaagggccgaaattgct 20863796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 24603502 - 24603666
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||| | ||||| |||| |||| |||  |       
T  24603502 accccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaattttgggatgaagggggccaaagttgtcattt 24603601  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||| ||||||||||| | || ||||||||||||| ||||||||||||  | |||||||||    
T  24603602 tttttaata-ggggccaaaatcgtaatattttaaaacatatggggcgaaaagtacactttagccta 24603666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22269547 - 22269618
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  22269547 accccttatctttacaaaaagttgtgtttatggccccttttttgggacacgtggcgtcttctcaacaatttt 22269618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26710470 - 26710399
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  26710470 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcagtaatttt 26710399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24051149 - 24051243
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    ||||||||| |||||||||||||| ||||||  || |||||||||||||||||||||||||||| ||||||| | |||||| ||| |||||||||    
T  24051149 accccttatatttacaaaaagttgcgattatgacctcttttttgggacacgtggcgtcttctcatcaattttgggatgaaatgggccaaaattgc 24051243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 15298628 - 15298775
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnn 102  Q
    |||||||||||||||||||||| |||||| | || |||||||||||| ||||||||||||||||||||||   || || || | ||||||||| |         
T  15298628 cccttatctttacaaaaagttgcgattatggtcc-ttttttgggacaagtggcgtcttctcagcaattttgagataaagggagccaaaattgccattttt 15298726  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaa 151  Q
       |||| ||||||||||| |||||||||| |||||||| |||||||||    
T  15298727 tttaataaggggccaaaatcgcaacattttgaaacatagagggcgaaaa 15298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 3118824 - 3118989
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    |||||||||||||||| ||| ||||||  |||||||| ||||||||||| | |||||| | ||||||| | |||||||||| |||||||| ||           
T  3118824 cttatctttacaaaaatttgcgattatgaccccttttctgggacacgtgacatcttctgatcaattttgggatgaaaggggccaaaattg-ta-attttt 3118921  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
     || |||||||||||||   |||||| | ||||||||||||||||||||| |||||||||||| ||||    
T  3118922 taacagggggccaaaatcataacattatgaaacatagggggcgaaaagtgcagtttagcctatttttt 3118989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 4597651 - 4597712
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  4597651 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctat 4597712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 25819743 - 25819685
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  25819743 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagcc 25819685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9241793 - 9241882
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaa 90  Q
    ||||||||||||  |||||||||| ||||||  || || ||||||||||| ||||| |||||||| |||||| |||||||||||||||||    
T  9241793 accccttatcttctcaaaaagttgcgattatgccctctgttttgggacacatggcgccttctcagtaattttggaatgaaaggggtcaaa 9241882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 18791416 - 18791356
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  18791416 aatagagggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 18791356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 24051067 - 24051007
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  24051067 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 24051007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 32451784 - 32451716
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||    
T  32451784 aatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcctttattttat 32451716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 22968316 - 22968226
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||||||||||||| |||||| | ||||||| || |||||||| | |||||| ||||||||| | |||||||||| ||||||||    
T  22968316 cccttatctttacaaaaagttgcgattat-gacccttttctgagacacgtgacatcttctgagcaattttgggatgaaaggggccaaaattg 22968226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23124883 - 23124816
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaa 68  Q
    |||||||||||||||||||||||| ||||||  |||||||||  ||||| ||||||||||||||||||    
T  23124883 accccttatctttacaaaaagttgcgattatgacccctttttgaggacatgtggcgtcttctcagcaa 23124816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 23820077 - 23820167
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||||||||||||| |||||| | ||||||| || |||||||| | |||||| ||||||||| | |||||||||| ||||||||    
T  23820077 cccttatctttacaaaaagttgcgattat-gacccttttctgagacacgtgacatcttctgagcaattttgggatgaaaggggccaaaattg 23820167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 31210852 - 31210793
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  31210852 aataggaggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcct 31210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 26710553 - 26710611
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  26710553 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8412899 - 8412952
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtgg 54  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  8412899 accccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtgg 8412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 24615940 - 24615997
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  24615940 ggggctaaaattgcaacattttaaaacttaggaggcaaaaagtgaagtttagcctata 24615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 14572422 - 14572482
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||| | |||||||||    
T  14572422 aatagggggccaaaattgcaatattttaaaacttagagggcgaaaagtggactttagccta 14572482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 35102713 - 35102768
Alignment:
Q  110 gggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  35102713 gggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcct 35102768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 8415294 - 8415352
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  8415294 aatagggagctaaaatcgcaacattataaaacatagggggcgaaaagtgcagtttagcc 8415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 18749374 - 18749432
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  18749374 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 18749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 32682531 - 32682581
Alignment:
Q  115 ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  32682531 ccaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagcct 32682581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 4013911 - 4013968
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    |||||||||||||||| |||||||||| |||| |||||| ||||||||| ||||||||    
T  4013911 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34528289 - 34528382
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  |||||||||| |||||| ||  || |||||||||| |||  ||||||||||||||||| | | |||||||| ||||||||    
T  34528289 accccttatcttctcaaaaagttgcgattatggcgactgttttgggacatgtgatgtcttctcagcaattttgggacgaaaggggccaaaattg 34528382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 493
Target Start/End: Complemental strand, 5711233 - 5711169
Alignment:
Q  429 gttagtcagtttagtccatgatattactagcaaaagacacattcatggatgtttttgtaatttca 493  Q
    |||||||||||||||| |||| | ||||| |||||| |||| ||||||||||||||| |||||||    
T  5711233 gttagtcagtttagtctatgaaaatactaacaaaagtcacactcatggatgtttttgcaatttca 5711169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 9241698 - 9241651
Alignment:
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  9241698 aaaattgcaacattttaaaacttagggtgtgaaaagtgaagtttagcc 9241651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 11661082 - 11661011
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagcccctt-ttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||||||||||||| |||| | ||||||| |||||||||| |||| ||||||| |||| ||||    
T  11661082 ccccttatctttacaaaaagttgcgattttggccccttattttgggacatgtggtgtcttctaagcagtttt 11661011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 22968404 - 22968459
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||| |||||||||| |||| || ||||||||||||||| |||||||||    
T  22968404 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagccta 22968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 23819989 - 23819934
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||| |||||||||| |||| || ||||||||||||||| |||||||||    
T  23819989 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagccta 23819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 34833970 - 34833923
Alignment:
Q  119 aattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  34833970 aattgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 34833923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2636918 - 2637012
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||| |||||||||||||| |||||| | ||||||| | || ||| |||||||||||||  ||||||| | | |||||||| ||||||||    
T  2636918 accccttatttttacaaaaagttgcgattatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaattg 2637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 24615849 - 24615764
Alignment:
Q  9 tctttacaaaaagttgtgattatagcccct-tttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    ||||||| |||||||| ||||||  ||| | ||||||||||| ||||||| |||||||||||||||| | ||||| || |||||||    
T  24615849 tctttactaaaagttgcgattatgacccttatttttgggacatgtggcgttttctcagcaatttttggacgaaagaggccaaaatt 24615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26240098 - 26240191
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||   |||||||||  |||||  |||||||| | ||||||||||||||||||| ||| |||| ||| |||| ||| ||||||||    
T  26240098 accccttatcttctaaaaaagttgcaattatgaccccttttataggacacgtggcgtcttctcggcagttttggaacgaaatgggccaaaattg 26240191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19282374 - 19282305
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||| |||||||||| ||||||  |||||||||  ||||| ||| | ||||||||||||||||    
T  19282374 accccttatcttttcaaaaagttgcgattatgaccccttttt--ggacatgtgacttcttctcagcaatttt 19282305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 27322113 - 27322172
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||||||| | |||||||||||    
T  27322113 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctata 27322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 6842327 - 6842386
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||||||||| |||| |||| ||| ||| |||||||| | |||||||||    
T  6842327 atagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagccta 6842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 12293724 - 12293783
Alignment:
Q  7 tatctttacaaaaagttgtgattatagcccctt-ttttgggacacgtggcgtcttctcag 65  Q
    |||||||||||||||||| |||| || |||| | ||||||||||||| ||||||||||||    
T  12293724 tatctttacaaaaagttgcgattttaaccccctgttttgggacacgtagcgtcttctcag 12293783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 14195702 - 14195792
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    |||||||| |||||||||||||| |||||| || | ||||||  || ||||||||||| |||||||||||| |||  ||||| | |||||||    
T  14195702 ccccttatttttacaaaaagttgcgattat-gcactttttttttgaaacgtggcgtctactcagcaattttggaactaaaggagccaaaatt 14195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4371039 - 4371126
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||||||||||||||| || | |      ||||||||||||  |||||| ||||||||||||||   |||||||||| ||||||||    
T  4371039 accccttatctttacaaaaagttgcgacttt------ttttttgggacatatggcgttttctcagcaattttgagatgaaaggggccaaaattg 4371126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 27447962 - 27448024
Alignment:
Q  112 gggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||||||| ||| ||||||||| || |||| |||||||| | |||||||||| ||||||    
T  27447962 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattttttat 27448024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 2058982 - 2058926
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||| ||||||  ||||| |||| ||||| || |||||||||||||||||||    
T  2058982 aaaaagttgggattatgacccctgttttaggacatgtagcgtcttctcagcaatttt 2058926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12427373 - 12427445
Alignment:
Q  1 accccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||| ||||||||||||||| |||| |||| |  ||| || ||||||||||||| | ||||||||||||||||    
T  12427373 accctttatctttacaaaaaagttgcgattttgacccattctttgggacacgtgccatcttctcagcaatttt 12427445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 23124932 - 23124992
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| ||||||||||||||  |||| || |||||||| | |||||||||    
T  23124932 aataggggaccaaaatcgcaacattttaaaatttaggaggtgaaaagtgcaatttagccta 23124992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 27437885 - 27437825
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||||||||||||||| |||| |||  || |||| |||||||| | ||||||||||    
T  27437885 atagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctat 27437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13397838 - 13397675
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||       
T  13397838 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgctattt 13397739  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||    
T  13397738 tttttaatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 13826582 - 13826418
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  13826582 accccttatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcca-tt 13826484  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||| |||||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  13826483 tttttaatagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagccta 13826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 25011876 - 25012039
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||   ||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||       
T  25011876 accccttatctttacaaaaagttgggattatgatcccttttttgggacacgtggcatcttctgagcaattttggaatgaaaggggccaaaattgcta-tt 25011974  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  25011975 tttttaatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 25012039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19232506 - 19232341
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  19232506 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctattt 19232407  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||| |||||||||||||||||| |||||||||||||||| |||||| | |||||||||    
T  19232406 tttttaataggaggccaaaattgcaacattataaaacatagggggcggaaagtgcactttagccta 19232341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 43793794 - 43793629
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||| |||||||||||||| || |||  |||||||||||||||| |||||||||||||||||||||| | | |||| ||| ||||||||| |       
T  43793794 accccttatatttacaaaaagttgcgaatatgaccccttttttgggacatgtggcgtcttctcagcaattttgggacgaaatgggccaaaattgccattt 43793695  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  43793694 tttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagccta 43793629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 15058981 - 15058819
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |||| |       
T  15058981 accccttatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaagttgcca-ta 15058883  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||| ||||||||||| |||||||||| ||||||||||||| ||||||| | ||||||||    
T  15058882 tttttaata-ggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagcct 15058819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 4357393 - 4357545
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||| |       
T  4357393 accccttatctttacaaaaagttgcgattatggccctttttttgggacacctggcgtcttctcagcaattttagaatgaagggggccaaaattgcca-tt 4357491  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  4357492 tttttaatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaagtg 4357545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5304510 - 5304347
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||   ||||| |||| ||||||||| |       
T  5304510 accccttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctcagcaattttgcgatgaagggggccaaaattgccattt 5304411  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||| ||||||||||   |||||||| ||||||||||||||||||||| | |||||||    
T  5304410 tttttaatagagggccaaaatcaaaacattttgaaacatagggggcgaaaagtgcactttagcc 5304347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25618790 - 25618648
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||       
T  25618790 accccttatctttacaaaaagtggcgattatggccccttttt-gggacacgtggcgtcttctcagcaatttttggatgaaagggaccaaaattgctattt 25618692  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggg 144  Q
         |||||||| |||||||| ||||||||| |||||||||||    
T  25618691 tttttaataggggaccaaaattacaacattttgaaacatagggg 25618648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41034777 - 41034936
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||||||   |||||||||| |||||||||||       
T  41034777 accccttatttttacaaaaagttgcgattatagtcccttttttggaacacgtggcgtcttctcggtaatttt--gatgaaaggggccaaaattgctattt 41034874  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
         |||||||| |||||||||||||||||||||| ||||||| ||||||||  |||||||    
T  41034875 tttttaataggggaccaaaattgcaacattttaaaatataggggacgaaaagtacagtttag 41034936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4433346 - 4433181
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||||||||||  |||||||| | ||||||||||| |||| | ||||||||| | ||||||  |||||||||||||        
T  4433346 accccttatctttacaaaaagttgtgattatgaccccttttctaggacacgtggcatcttatgagcaattttgggatgaaataggtcaaaattgcttttt 4433247  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||| ||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||    
T  4433246 tttttaataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 4433181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27018355 - 27018516
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||| |       
T  27018355 accccttatccttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattgccattt 27018454  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacata-gggggcgaaaagtgaagttta 161  Q
         ||||||||| |||||| |||||||||| ||||||| |||||||| ||||| ||||||    
T  27018455 tttttaatagggggtcaaaatcgcaacattttgaaacataggggggcgagaagtgcagttta 27018516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 35475430 - 35475603
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||| |        
T  35475430 accccttatctttacaaaaagtagcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttaggatgaaatgggccaaaattg-tcatt 35475528  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttatg 175  Q
         | || ||| ||||||| |||||||||||||||||||||| | ||||||| |||||||||  |||||||||    
T  35475529 tttttattaagggaccaaaatcgcaacattttaaaacataggggacaaaaagtgcagtttagccattattttatg 35475603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 13394667 - 13394536
Alignment:
Q  33 gccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacatttt 132  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||  |        |||||||||| ||||| ||||||||||    
T  13394667 gccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgtcattttttttaatagggggctaaaatcgcaacatttt 13394568  T
Q  133 aaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||||||||| | |||||||    
T  13394567 aaaacatagggggcgaaaagtgcactttagcc 13394536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 52838370 - 52838523
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca--atttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||| |||||| | |||||||||| |||||||| |||||||||||||  ||||||  |||||||||| |||||||||||       
T  52838370 cccttatctttacaaaaagttgcgattatggtcccttttttgagacacgtgtcgtcttctcagcaatattttttgatgaaaggggccaaaattgctattt 52838469  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         |||| || ||||||| | ||||||||||||||||||||| |||||||||    
T  52838470 tttttaatatggagccaaaactacaacattttaaaacataggggacgaaaagtg 52838523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 2931462 - 2931625
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||| ||| |||| | ||||| ||||| |||| ||||||||||||||||  ||||||| |||||||||| ||||||| |||       
T  2931462 accccttatctttacaaaaaattgcgattgtggccccgttttttggac-cgtggcgtcttctcagacatttttggatgaaaggggccaaaattacta-tt 2931559  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||| ||  |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  2931560 ttcttaataggaggttaaaattacaacattttaaaacatagggggcgaaaagtgcagtttagccta 2931625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41877189 - 41877030
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||  |||| ||||||  |||||||||| |||||||||||||||| ||||||||||||  |||||||||| ||||||| |||       
T  41877189 accccttatctttacaaa--gttgcgattatgaccccttttttaggacacgtggcgtcttttcagcaattttttgatgaaaggggccaaaattactattt 41877092  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
         |||| | || ||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  41877091 tttttaata-gaggacaaaactgcaacattttaaaacataaggggcgaaaagtgcagtttagc 41877030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 6789121 - 6788968
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| ||||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||||| ||||||||| | ||||| |||| ||||||||| |       
T  6789121 acccgttatctttacaaaaaattgcgattatgcccctttttttgggacacgtggcgtcttcttagcaattttgggatgaagggggccaaaattgccattt 6789022  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         ||||||||| |||||| |||| ||||||||||||||| || ||||||||    
T  6789021 tttttaatagggggacaaaatcgcaatattttaaaacataggaggtgaaaagtg 6788968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45633578 - 45633740
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||  ||||||||||||||||  ||| |||||| ||||||||||||| |||||| ||||||| | |  ||||||| ||||||||| |       
T  45633578 accccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaattttgggacaaaaggggccaaaattgcaattt 45633676  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||| ||||| ||||||||||||||| ||  ||||||||||||||||| ||||    
T  45633677 tttttaatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 45633740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2715880 - 2715817
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  2715880 accccttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctca 2715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 51291332 - 51291261
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  51291332 accccttatcttctcaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcaccaatttt 51291261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1588576 - 1588483
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||| |||| |||| ||| |||| ||| |||||||||    
T  1588576 accccttatctttacaaaaagttgcgattatagcctc-tttttgggacacgtgacgtcttcttagcagttttggaaagaaaagggccaaaattgc 1588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4098798 - 4098960
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  ||||||||||  ||||  |||||||||||||||||||||||||||||||  ||||||| | | |||||||| || ||||  ||       
T  4098798 accccttatcttctcaaaaagttgcaattaaggccccttttttgggacacgtggcgtcttctcgtcaattttgggacgaaaggggccataatt-ataaat 4098896  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||| |||||||||| ||||||||||||||| ||| || | ||||||| |||||||||    
T  4098897 tttttaatagagggccaaaatcgcaacattttaaaacttagaggtcaaaaagtgcagtttagcc 4098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 15734549 - 15734622
Alignment:
Q  11 tttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggg 84  Q
    |||||||||||||||||| || |||||||||||||||||||   |||||||||||||||||| ||| |||||||    
T  15734549 tttacaaaaagttgtgataatggccccttttttgggacacgcaacgtcttctcagcaattttggaacgaaaggg 15734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 47869811 - 47869967
Alignment:
Q  16 aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggc 115  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||| | ||||| | || || |||||| |        ||||||||||    
T  47869811 aaaaagttgcgattat-gacccttttttggaacacgtggcgtcttctcagcaattttgggatgaaggaggccagaattgcca-tttttttaatagggggc 47869908  T
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||  ||||||||| ||| ||||||||| |||| || | |||||||| ||||||||    
T  47869909 caaaatcacaacattttgaaatatagggggcaaaaattgcactttagcctttattttat 47869967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 18259357 - 18259421
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
    |||||||||||||||| |||||||||| |||  ||| ||||||||||||||||||||||||||||    
T  18259357 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagcctatatt 18259421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 2931370 - 2931311
Alignment:
Q  115 ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||    
T  2931370 ccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcccttattttat 2931311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 13397921 - 13397980
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||    
T  13397921 aatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagtttagcct 13397980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 6209365 - 6209309
Alignment:
Q  38 ttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||    
T  6209365 ttttttgggacacgtggtgtcttctcagcaattttggaacgaaaggggccaaaattg 6209309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9397333 - 9397493
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| |||||||||||||||||||| ||||| | || |||||| ||||||||| ||| |||||| ||||||| | |  ||||||| |||| || |         
T  9397333 accctttatctttacaaaaagttgtcattat-gacctttttttcggacacgtgccgtgttctcaacaattttgggactaaaggggccaaattttc--att 9397429  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||||||||||  |||||||||||||| ||||||| |||||||| |||||||||    
T  9397430 tttttaatagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagcc 9397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 16291843 - 16291777
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatag--ccccttttttgggacacgtggcgtcttctcagca 67  Q
    |||||||||||||||||||||||||||| |||  ||||| ||||||| ||||||||||||||||||||    
T  16291843 ccccttatctttacaaaaagttgtgatt-taggccccctgttttgggtcacgtggcgtcttctcagca 16291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 25618842 - 25618910
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    ||||||||| ||||||||||||||||| |||| ||| ||||| ||||||||||||||||| | ||||||    
T  25618842 aatagggggtcaaaattgcaacattttgaaacttagagggcgcaaagtgaagtttagccttttttttat 25618910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 35475349 - 35475289
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||    
T  35475349 aatagggagccaaaatcgcaacattttaaaacttagagggcgaaaaatgaagtttagccta 35475289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36729251 - 36729159
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaatt 93  Q
    ||||||||||||  |||||||||  ||||||  ||  |||||||||||| ||||||||||||||| |||||| | |||||||||| |||||||    
T  36729251 accccttatcttctcaaaaagtttcgattatgaccttttttttgggacatgtggcgtcttctcagtaattttgggatgaaaggggccaaaatt 36729159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 41877270 - 41877330
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||| |||||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  41877270 aatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 41877330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 55780445 - 55780385
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| ||||||||| ||||| || |||||||||| ||||||||||||||    
T  55780445 aatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagccta 55780385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 55844625 - 55844565
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| ||||||||| ||||| || |||||||||| ||||||||||||||    
T  55844625 aatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagccta 55844565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23362576 - 23362635
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||| | |||||||||||    
T  23362576 cttatctttacaaaaagttgcgattatgaccccttttttgggacacattgcgtcttctca 23362635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 24626462 - 24626524
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
    ||||| || ||||||||||||||||||||||| ||||| || ||||||| |||||||||||||    
T  24626462 aatagaggtccaaaattgcaacattttaaaacttagggagcaaaaagtgcagtttagcctata 24626524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 25011793 - 25011735
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| |||||| ||||||||| |||||||||    
T  25011793 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 4433433 - 4433485
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  4433433 ggggccaaaatcgcaacattttaaaactta-ggggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 43793876 - 43793937
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||||||||||| |||||||||| |||| |||| ||| ||||||| ||||||||||||    
T  43793876 aatagggggccaaaatcgcaacattttgaaacttaggcggcaaaaagtggagtttagcctat 43793937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 5304591 - 5304651
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||| ||| |||||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  5304591 aatagagggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 5304651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 6789207 - 6789263
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||||||| |||||||||| |||| ||  |||||||||||||||||||||||    
T  6789207 agggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagtttagcct 6789263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 52838279 - 52838231
Alignment:
Q  116 caaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  52838279 caaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 52838231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 17138540 - 17138587
Alignment:
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagcc 17138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 55780527 - 55780586
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtctt 60  Q
    |||||||||||||||||||||||| ||||||  |||||||| | ||||||||||| ||||    
T  55780527 accccttatctttacaaaaagttgcgattatgaccccttttctaggacacgtggcatctt 55780586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 55844707 - 55844766
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtctt 60  Q
    |||||||||||||||||||||||| ||||||  |||||||| | ||||||||||| ||||    
T  55844707 accccttatctttacaaaaagttgcgattatgaccccttttctaggacacgtggcatctt 55844766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 4357310 - 4357252
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||| || ||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  4357310 aatagggagctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9195827 - 9195661
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtc-ttctcagcaatttttgaatgaaaggggtcaaaattgcta-n 98  Q
    |||||||||||||||||||||||| ||||||  |||||||| | | |||||||||  | || | ||||||| | | ||||||||||  ||||||||||      
T  9195827 accccttatctttacaaaaagttgcgattatgaccccttttctagaacacgtggcacctttttgagcaattatgggatgaaaggggcaaaaattgctatt 9195728  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
           |||| ||||||||||| |||| ||| | ||||||||||||| ||||||| | ||||||||    
T  9195727 ttttttaaataaggggccaaaatcgcaatattatgaaacatagggggcaaaaagtgcactttagcct 9195661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 12893220 - 12893266
Alignment:
Q  108 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||    
T  12893220 tagggggccaaaattgcaacatttgaaaagatagggggccaaaagtg 12893266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 15795463 - 15795529
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||| |||||||||| ||||||  ||| |||||| ||||| |||||||||||||| |||||||    
T  15795463 ttatcttttcaaaaagttgggattatgacccattttttaggacatgtggcgtcttctcatcaatttt 15795529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 20919481 - 20919332
Alignment:
Q  17 aaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggcc 116  Q
    |||||||||||||||   |||| |||||||||| ||| |||||||||||||||||| | | ||||   | |||||||| ||        ||||| |  ||    
T  20919481 aaaagttgtgattatgatccctcttttgggacatgtgacgtcttctcagcaattttgggacgaaactagccaaaattg-taatttttttaatagagaacc 20919383  T
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||| |||||||||| |||| |||||| ||||||||| ||||||||||||    
T  20919382 aaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcctat 20919332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 24626275 - 24626221
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||| |||||| ||||||||||||||| ||| |||||||||||| ||||||||||    
T  24626275 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgcagtttagcct 24626221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 9195908 - 9195968
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| |||||||||| |||  ||||||||||||||||  ||||||||||    
T  9195908 aataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtggtgtttagccta 9195968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 33978876 - 33978936
Alignment:
Q  5 cttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctca 64  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||||||||  |||||||    
T  33978876 cttatctttacaaaaaagttgcgattatgaccccttttttgggacacgtggcagcttctca 33978936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 40168697 - 40168630
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||| ||| |||| |||||  |||||||  |||| || ||||||||||||||||||    
T  40168697 aatagggggccaaaatcgcaccattgtaaaagttagggggtcaaaactgcagtttagcctatatttta 40168630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 40259728 - 40259673
Alignment:
Q  2 ccccttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcg 56  Q
    ||||||||||||||||||| |||||| ||||  || ||||||||||||||||||||    
T  40259728 ccccttatctttacaaaaaagttgtgcttatgacctcttttttgggacacgtggcg 40259673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 45633491 - 45633436
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||| |||||| |||| ||||| |||| |||||||||||||||| |||||||||||    
T  45633491 ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagccta 45633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 1588669 - 1588719
Alignment:
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||| ||||||||||||||| || ||| ||||||||| ||||||||||||    
T  1588669 aaaatcgcaacattttaaaacttaagggacgaaaagtggagtttagcctat 1588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Complemental strand, 14012732 - 14012643
Alignment:
Q  404 agtttggtccacaaacatgtcttctgttagtcagtttagtccatgatattactagcaaaagacacattcatggatgtttttgtaatttca 493  Q
    |||||||||| |||| || |||| ||||||||||||||||||| ||  ||||||  |||| | ||| | | ||||||||||||| |||||    
T  14012732 agtttggtcctcaaatatctcttttgttagtcagtttagtccaagaagttactaaaaaaatatacactgagggatgtttttgtattttca 14012643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 20079188 - 20079151
Alignment:
Q  124 caacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  20079188 caacattttaaaacttagggggcgaaaagtgcagttta 20079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 1961170 - 1961230
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||| |||  |||| |||||||  ||||||| | |||||||||    
T  1961170 aatagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagccta 1961230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 6209487 - 6209535
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||| ||||||| ||||||||||||||| |||||| | |||||||    
T  6209487 aataggggaccaaaatcgcaacattttaaaacttaggggtctaaaagtg 6209535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 24626380 - 24626312
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||  |||||||||||||||||  ||| | |||||||||| |||| ||||||| | |||||||    
T  24626380 ccttatcttctcaaaaagttgtgattatgacccatgttttgggacatgtggtgtcttcttaacaatttt 24626312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 27290861 - 27290825
Alignment:
Q  125 aacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  27290861 aacattttaaaacttagggggcgaaaagtgcagttta 27290825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 6e-45; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16901160 - 16900996
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||| |       
T  16901160 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattgccattt 16901061  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||| |||||| |||||||||| ||||||||| ||||||||||| ||||||||||    
T  16901060 tttttaatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcct 16900996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 245735 - 245908
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |       
T  245735 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgccattt 245834  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
         |||||||| | ||||| |||||||||||||||||||| ||||||||||| | |||||||| | ||||||    
T  245835 tttttaataggggactaaaatcgcaacattttaaaacataggtggcgaaaagtgcactttagcctttgttttat 245908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 18695144 - 18695309
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| |       
T  18695144 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgagatgaaaggggccaaaattgcca-tt 18695242  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         |||||||||||||||| |||| ||||| ||||||||||||||||||||| | ||||||||||    
T  18695243 tttttaatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcctat 18695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25557038 - 25556876
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  25557038 accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgcca-at 25556940  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||    
T  25556939 tttttaatagggggccaaaattgcaacattttgaaacata-ggggcgataagtgcagtttagcct 25556876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 31055477 - 31055313
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||| ||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  31055477 accccttatctttacaaaaaattgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgcta-tt 31055379  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  31055378 tttttaatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 31055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40428802 - 40428649
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||| | | ||| |||| ||||||||| |       
T  40428802 accccttatctttacaaaaaattgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattttgggacgaagggggccaaaattgccattt 40428703  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         |||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  40428702 tttttaataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtg 40428649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26639200 - 26639036
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||||| | ||||| |||| ||||||||| |       
T  26639200 accccttatctttacaaaaagttgcaattatggcctcttttttgggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaattgccattt 26639101  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||||| | ||||||  ||||||||| ||||||||||||||||||||| | ||||||||    
T  26639100 tttttaatagggagtcaaaatcacaacattttgaaacatagggggcgaaaagtgcactttagcct 26639036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 16307636 - 16307473
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnn 103  Q
    |||||||||||||||||||||  |||||  |||||||||| ||||| ||||||||||||||||||||||   |||||||||| ||||||||| |          
T  16307636 ccttatctttacaaaaagttgcaattatgacccctttttttggacatgtggcgtcttctcagcaattttaagatgaaaggggccaaaattgcca-ttttt 16307538  T
Q  104 nnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctata 168  Q
      |||||||| |||||||  |||||||||||||||||||||| |||||||| |||||| ||||||    
T  16307537 ttaataggggaccaaaatcacaacattttaaaacatagggggtgaaaagtgcagtttaacctata 16307473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 36641284 - 36641442
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| ||||||||| ||||||||| ||||||   |||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||| |||       
T  36641284 acccgttatctttataaaaagttgcgattatgatcccttttttgggacacatggcgtcttctcagcaattttttgatgaaaggggccaaaattactattt 36641383  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||||||||     |||||||| ||||||||||||||||||||| |||||||||    
T  36641384 tttttaatagggggccaaa-----aacattttgaaacatagggggcgaaaagtgcagtttagcc 36641442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 38408769 - 38408933
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  |||||  ||| |||| ||||||||||||| |||||| ||||||||| | |||||| ||| |||||||||||       
T  38408769 accccttatctttacaaaaagttgctattatgacccattttctgggacacgtggcatcttctgagcaattttgggatgaaa-gggccaaaattgctaatt 38408867  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||| ||||||| |||||||| |||||||||| || |||||| || |||||||||||    
T  38408868 tttttaataggggaccaaaatcgcaacattataaaacatagaggacgaaaaatgcagtttagccta 38408933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 19169484 - 19169648
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  ||||| |||| |||||| | |||||||||||||||||||||||||| | || || |||| ||||||||| |       
T  19169484 accccttatctttacaaaaagttgcaattatggcccatttttttgaacacgtggcgtcttctcagcaattttaggatcaagggggccaaaattgccattt 19169583  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||| |||||||||  ||||||||| ||| ||||||| ||||||||| | ||||||||    
T  19169584 tttttaataggaggccaaaatcacaacattttgaaatataggggacgaaaagtgcactttagcct 19169648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10379422 - 10379585
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| || |||| ||||| |||||| || |||||| | |||||||||  |||||||||||       
T  10379422 accccttatctttacaaaaagttgcgattatgaccccttttctgagacaagtggcatcttctgagaaattttgggatgaaagggaccaaaattgcta-tt 10379520  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         ||||  || |||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  10379521 tttttaataaaggaccaaaattgcaacattataaaacataaggggcgaaaagtgcagtttagcct 10379585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 31648173 - 31648290
Alignment:
Q  49 acgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcga 148  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||| |        |||||  ||||||||| |||||||||| ||||||||||| |||    
T  31648173 acgtggcgtcttctcagcagttttgggatgaaaggggtcaaaattgccattttttttaatagaaggccaaaatcgcaacattttgaaacataggggacga 31648272  T
Q  149 aaagtgaagtttagccta 166  Q
    |||||| |||||||||||    
T  31648273 aaagtgcagtttagccta 31648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 23765635 - 23765695
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23765635 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 23765695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 23815483 - 23815543
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23815483 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 23815543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38476632 - 38476469
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||  |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||||  |       
T  38476632 accccttatcttctcaaaaagttgcgattat-gacccttttttgggacacgtggcgtcttctcagcaattttgggacgaaatgggccaaaattgtcattt 38476534  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||||||||| ||||| ||||| ||||  ||| |||||| ||||||||| | ||||||||    
T  38476533 tattaaatagggggctaaaatcgcaactttttgtaacttaggggtcgaaaagtgcattttagcct 38476469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 17825660 - 17825495
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||| |||||||  |||||||||| |||||| |||||||||||||||||||||||||||||| |  ||||||   |||||||||| |||||||| ||       
T  17825660 accctttatcttgtcaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctaaaaaattttgagatgaaaggggccaaaattg-taatt 17825562  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacataggggg-cgaaaagtgaagtttagccta 166  Q
         ||| ||||| ||||||||||||||| | |||| ||||||| ||||||||  |||||||||||    
T  17825561 tttctaattgggggtcaaaattgcaacattctgaaacctagggggtcgaaaagtacagtttagccta 17825495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8674019 - 8673927
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||||||||||||||||||||||||||||| ||| ||||||  |||||||| | |||||||| ||||||| ||| ||| |||||||||||||    
T  8674019 accccttatctttacaaaaagttgtgattataacccatttttt-agacacgtgacatcttctcaacaattttagaacgaatggggtcaaaattg 8673927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 23765473 - 23765418
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  23765473 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23765418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 23815321 - 23815266
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  23815321 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23815266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2373286 - 2373458
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||| ||  |||||| ||| ||||||  ||||||||| ||||||||||||||||||| ||||||||| | | || ||||| ||||||||          
T  2373286 accccttattttctcaaaaatttgcgattatgacccctttttggggacacgtggcgtcttcttagcaattttgggacgacaggggccaaaattgtccttt 2373385  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
         |||||| ||||||||| ||||| |||| |||| ||||||  |||||||| ||||||||||| ||||||    
T  2373386 ttttaaataggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcctaaatttta 2373458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 41663672 - 41663593
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||||| ||| |||||| ||||||||||||||||||||||| |||||| ||||||||| | | |||| ||||||||||||    
T  41663672 caaaaaattgcgattatggccccttttttgggacacgtggcatcttcttagcaattttgggacgaaatgggtcaaaattg 41663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 18695062 - 18695004
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  18695062 aatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 37961411 - 37961246
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||| |||  ||||||||||  ||||| |||||||||  ||||||||||| ||||||||||||||||| | |||||||||  ||| ||||  |       
T  37961411 accccttaacttctcaaaaagttgcaattatggccccttttaagggacacgtggtgtcttctcagcaattttgggatgaaagggaccaagattgtaattt 37961312  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||| |||||| |||| ||||| |||| |||| || ||||||||  ||||||||||    
T  37961311 tttttaatagggggtcaaaatcgcaatattttgaaacttaggaggtgaaaagtgcggtttagccta 37961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 245654 - 245594
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||| ||||    
T  245654 aatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagtttaaccta 245594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 7835850 - 7836014
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||| || || |||||| |||| ||||||  |||| |||||||||||||| ||| ||| | ||||||| ||  | |||||| |       
T  7835850 accccttatctttacaaagaggtgggattatggcccttttttttagacatgtggcgtcttctcaacaactttgggatgaaagaggctagaattgcca-tt 7835948  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||  |||||||| |||| ||||||||||||| | ||||||||||| |||||||||||    
T  7835949 tttttaataggaagccaaaatcgcaatattttaaaacataagaggcgaaaagtgcagtttagccta 7836014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17704750 - 17704679
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||| | ||||| | ||||||||||||||    
T  17704750 accctttatctttacaaaaagttgaaattatggccccttttttgggataagtggcatgttctcagcaatttt 17704679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 23765548 - 23765460
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaattttt-gaatgaaaggggtcaaaattgc 95  Q
    ||||||||||||||||||| |||||| | |  |||||| ||||||||||||||||||||| ||||||| || | ||||||| |||||||||    
T  23765548 ttatctttacaaaaagttgcgattatggtc--tttttttggacacgtggcgtcttctcagaaatttttggatttaaaggggccaaaattgc 23765460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 23815396 - 23815308
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaattttt-gaatgaaaggggtcaaaattgc 95  Q
    ||||||||||||||||||| |||||| | |  |||||| ||||||||||||||||||||| ||||||| || | ||||||| |||||||||    
T  23815396 ttatctttacaaaaagttgcgattatggtc--tttttttggacacgtggcgtcttctcagaaatttttggatttaaaggggccaaaattgc 23815308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 20732693 - 20732628
Alignment:
Q  3 cccttatctttac-aaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||||||| ||||||||| |||| | |||||||| ||||||||||||||| ||||||||||    
T  20732693 cccttatctttaccaaaaagttgcgattttggcccctttgttgggacacgtggcggcttctcagca 20732628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 25557120 - 25557180
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||| |||||| |||||||||| |||| |||||||||||||||  |||||||||||    
T  25557120 aatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagccta 25557180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 38408687 - 38408627
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||||||||||| |||| ||||| |||| |||||| ||||||||| |||||||||||    
T  38408687 aatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtggagtttagccta 38408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 7835773 - 7835722
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttag 162  Q
    |||||||||||  |||||||||||||| ||| ||||||||||||||||||||    
T  7835773 ggggccaaaatcacaacattttaaaacttagagggcgaaaagtgaagtttag 7835722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8645855 - 8645796
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||||||| |||||| |||||||||| ||||  || |||||||||||||||||||||||    
T  8645855 aatagggggtcaaaatcgcaacattttgaaactaagagggcgaaaagtgaagtttagcct 8645796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 38322345 - 38322408
Alignment:
Q  5 cttatctttacaaaaa-gttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    |||||||||||||||| |||| |||| |  ||||||||||||||||||||||| ||||||||||    
T  38322345 cttatctttacaaaaaagttgcgattttgaccccttttttgggacacgtggcggcttctcagca 38322408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 8645946 - 8646043
Alignment:
Q  56 gtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    ||||||||| ||||||| | |||||||||| ||||||||| |        ||||| || ||||||| |||||||||||||||||| |||||||||||||    
T  8645946 gtcttctcaacaattttgggatgaaaggggccaaaattgccattttttttaatagagg-ccaaaatcgcaacattttaaaacataaggggcgaaaagtg 8646043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 31576551 - 31576493
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||||||  |||||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  31576551 aatagggttccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 31576493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 462907 - 462980
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttg 74  Q
    |||||||||||||||||||||||| ||||||  ||   |||||  ||||||||||||||| ||| |||||||||    
T  462907 accccttatctttacaaaaagttgcgattatgaccttcttttttagacacgtggcgtcttttcaacaatttttg 462980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 15885326 - 15885257
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||||||||||||||  |||||| | |  |||||||||||| |||| || ||||||||||||||    
T  15885326 cccttatctttacaaaaagtttcgattatggtcatttttttgggacatgtggtgttttctcagcaatttt 15885257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 34125205 - 34125294
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||  |||||||||| ||||||  ||| | |||||| ||||||||||| ||||||| |||||| | ||||| |||| ||||||||    
T  34125205 cttatcttctcaaaaagttgcgattatgacccatgttttggaacacgtggcgtattctcagtaattttgggatgaagggggccaaaattg 34125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 40428888 - 40428941
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    |||| |||||| |||||||||| |||| ||| ||||||||||||||||||||||    
T  40428888 ggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 40428941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 10293247 - 10293179
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||||||| |||||||||| ||||||  || |||||||  |||| ||||||||||||||||| ||||    
T  10293247 ccttatctttccaaaaagttgcgattatgacctcttttttaagacatgtggcgtcttctcagcattttt 10293179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 10379341 - 10379281
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||| ||||||||||||| ||||||||||||| |||||| |||||| ||  ||||||||||    
T  10379341 aataaggggccaaaattgtaacattttaaaacttaggggacgaaaaatggggtttagccta 10379281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 20654040 - 20654100
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||| |||||||||  ||||||||| |||| |||||| ||||||||| |||||||||||    
T  20654040 aataggaggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagccta 20654100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 26639286 - 26639342
Alignment:
Q  109 agggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    ||||| ||||||| |||||||||| |||| ||| || ||||||||||||||||||||    
T  26639286 aggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 26639342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 17704828 - 17704887
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||| ||||| |||| |||||| ||||||||| ||||| ||||    
T  17704828 aatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagtttggcct 17704887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 24025079 - 24025020
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||| ||||| |||| ||||||||||| |||| | ||||||||    
T  24025079 aatagggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagcct 24025020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 37961502 - 37961549
Alignment:
Q  114 gccaaaattgcaacattttaaaacatagggggcgaaaagtgaagttta 161  Q
    ||||||||||||||||||| |||| ||||||| |||||||| ||||||    
T  37961502 gccaaaattgcaacattttgaaacttagggggtgaaaagtgcagttta 37961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 3597381 - 3597315
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttt 172  Q
    |||| ||||||||||| ||||||||   |||| |||||||| |||| || |||||||||||||||||    
T  3597381 aataaggggccaaaatcgcaacattagtaaacttagggggccaaaactgtagtttagcctatatttt 3597315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 4800981 - 4800935
Alignment:
Q  117 aaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
    ||||| ||||||||||||||| ||||||||||||| || ||||||||    
T  4800981 aaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7187335 - 7187388
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtctt 60  Q
    |||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||    
T  7187335 ttatttttacaaaaagttgcgattat-gacccttttttgggacatgtggcgtctt 7187388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 7611428 - 7611462
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacataggggg 145  Q
    ||||||||||||||||| |||||||||||||||||    
T  7611428 ggggccaaaattgcaactttttaaaacataggggg 7611462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 18739861 - 18739923
Alignment:
Q  6 ttatcttta-caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||| |||||||||  |||| |  ||||||||||||||||||||||| ||||||||||    
T  18739861 ttatctttatcaaaaagttacgattttgaccccttttttgggacacgtggcggcttctcagca 18739923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 38545435 - 38545373
Alignment:
Q  6 ttatctttacaaaaag-ttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    |||||||||||||||  ||| ||||||  ||||||||| ||||||||||||| ||||||||||    
T  38545435 ttatctttacaaaaaaattgcgattatgacccctttttcgggacacgtggcggcttctcagca 38545373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 36641201 - 36641140
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    |||||||| |||||||  ||| ||||| |||| |||  ||||||||||||||||||||||||    
T  36641201 aataggggaccaaaatcacaatattttgaaacttagaaggcgaaaagtgaagtttagcctat 36641140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 35302075 - 35302007
Alignment:
Q  3 cccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaattt 71  Q
    ||||||||||   |||||| || |||||| |||||| || ||||||||||||||||| |||| ||||||    
T  35302075 cccttatcttctaaaaaagctgcgattatggcccctgttctgggacacgtggcgtctgctcaacaattt 35302007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 66315 - 66478
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||||| | ||||||||||||||||||| |||||||| |||||||||| |||||||||||       
T  66315 accccttatctttacaaaaagttgcgattatgacccctttttttgaacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaattgctattt 66414  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
         |||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  66415 tttttaata-ggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcct 66478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 66242 - 66181
Alignment:
Q  106 aatagggggccaaaa-ttgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  66242 aatagggggccaaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 66181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 250681 - 250518
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||   ||||| |||| ||||||||| |       
T  250681 accccttatctttacaaaaagttgtgattatggccccttttttggggcacgtggcgtcttctcagcaattttcagatgaagggggccaaaattgccattt 250582  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         ||||||||| |||| | |||||||||||||||||||||||||||||||| | |||||||    
T  250581 tttttaatagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 5812 - 5647
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| |||||||||| | || ||||||  ||||||||| |       
T  5812 accccttatctttacaaaaagttgcgattatggccc-ttttttgggacacgtggcgtcttcgcagcaattttgggataaaagggaccaaaattgccattt 5714  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
         |||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  5713 tttttaataggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctat 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 5895 - 5954
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||| ||||| |||| ||| || ||||||||||||||||||||    
T  5895 aatagggggccaaaatcgcaatattttgaaacttagaggccgaaaagtgaagtttagcct 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25127 - 24974
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |       
T  25127 accccttatctttaacaaaagttgtgattatggccccttttttgggacacgtggcgtcttctcagcaattttggtatgaaaggggccaaaattgccattt 25028  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
         |||||||| ||||||| |||| ||||||||||||| | |||||||||||    
T  25027 tttttaataggggaccaaaatcgcaatattttaaaacatatgaggcgaaaagtg 24974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 25210 - 25269
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||| ||||||||||| ||||||||||| ||| ||| || |||||| |||||||||||||    
T  25210 aataaggggccaaaatcgcaacattttagaacttagaggacgaaaaatgaagtttagcct 25269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19423 - 19585
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |       
T  19423 accccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaatgggccaaaattgcca-tt 19521  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
         |||||||||||||||| | |||| ||| |||| || |||||||||| || |||||||||    
T  19522 tttttaatagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 61955 - 62123
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagcccctttt--ttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta- 97  Q
    ||||||||||||||||||||||||  ||||| |||||||||  ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||     
T  61955 accccttatctttacaaaaagttgcaattatggccccttttttttgggacacgtggcgtcttctcaacaatttttggatgaaaggggccaaaattgctat 62054  T
Q  98 -nnnnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
             |||| |||||||||||||||||||||| |||||||||||| ||||| || ||||||||||    
T  62055 tttttttttaatacggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagcct 62123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 61872 - 61813
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcct 165  Q
    |||||||||||||||| |||||||||| |||| |||  ||||||||||||||||||||||    
T  61872 aatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcct 61813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 142106 - 141945
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta--nnnnn 102  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||           
T  142106 cttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctaagcaatttttagatgaaaggggccaaaattgctattttttt 142007  T
Q  103 nnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
       |||| | |||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  142006 tttaataagaggccaaaattgcaacattataaaacataggggacgaaaagtgcagtttagcc 141945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 142192 - 142252
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  142192 aataggggaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttaaccta 142252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 3119 - 2961
Alignment:
Q  5 cttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnn 104  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||||| | ||||| |||| ||||||||| |           
T  3119 cttatctttacaaaaagttgcaattatggcctcttttttgggacacgtggcgtcttctcatcaattttgggatgaagggggccaaaattgcca-tttttt 3021  T
Q  105 naatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
     |||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||||    
T  3020 taatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 3206 - 3264
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||| ||||||||||||||||| |||| ||| ||||||||||||| ||||||||    
T  3206 aatagggggtcaaaattgcaacattttgaaacttagagggcgaaaagtgaggtttagcc 3264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 73; Significance: 5e-33; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 49800 - 49964
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  49800 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgcta-tt 49898  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||  |||||| |||||||| | ||||||||||||||||||||| | |||||||||    
T  49899 ttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 49964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 62339 - 62503
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||| ||||||||| | |||||||||| |||||||||||       
T  62339 accccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgcta-tt 62437  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         ||||||||  |||||| |||||||| | ||||||||||||||||||||| | |||||||||    
T  62438 ttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 62503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 49717 - 49657
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| ||||||||||||||| || ||||||||||||| | |||||||||    
T  49717 aataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagccta 49657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 62256 - 62196
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| ||||||| ||||||||||||||| || ||||||||||||| | |||||||||    
T  62256 aataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagccta 62196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 5973 - 6136
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    |||||||||||||| ||||||||| |||||| | || |||||||||||||||||| |||||||||||||||| | ||||| |||| ||||||||| |       
T  5973 accccttatctttataaaaagttgcgattat-gacctttttttgggacacgtggcatcttctcagcaattttgggatgaagggggccaaaattgcca-tt 6070  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| ||||||||| |||||||||||||||||||||  | |||||||||    
T  6071 tttttaatagggggccaaaatcgcaacatttaaaaacatagggggcgaaaagtacactttagccta 6136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 5259 - 5118
Alignment:
Q  26 gattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgcta-nnnnnnnnaatagggggccaaaattgc 124  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||| |         |||||||| ||||||||||    
T  5259 gattatggccccttttttgggacacatgacgtcttctcagcaatttttggatgaaaggggccaaaattgccatttttttttaataggggaccaaaattgc 5160  T
Q  125 aacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    |||||||| |||||||||||||||||| || | |||||||||    
T  5159 aacattttgaaacatagggggcgaaaaatgtaatttagccta 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 5348 - 5288
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||||||||||||||||||||||| |||||||  |||||| ||||| |||||||||||    
T  5348 aatagggggccaaaattgcaacattttgaaacataaagggcgagaagtgtagtttagccta 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 919 - 754
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannn 100  Q
    ||||||||||||||||||||||||  |||||  |||||| |||||||||  ||||||||||||| ||||||| | | ||| |||| ||||||||| |       
T  919 accccttatctttacaaaaagttgcaattatgaccccttatttgggacatctggcgtcttctcaacaattttgggacgaagggggccaaaattgccattt 820  T
Q  101 nnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
         |||||||||||||||| |||||||||  |||| || |||| |||||||| |||||||||||    
T  819 tttttaatagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagccta 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 1002 - 1065
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatt 170  Q
    ||||||||  ||||||||||||||| |||||| || |||||||||||||  ||||||||| ||||    
T  1002 aataggggatcaaaattgcaacattataaaactta-ggggcgaaaagtgttgtttagcctttatt 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3731 - 3650
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaag 82  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||||| | |||||||    
T  3731 accccttatctttacaaaaagtttcgattatagccccttttttgggacacgaggtgtcttctcagcaattttgggatgaaag 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 455168 - 455331
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg-ctann 99  Q
    ||||||||||||  | |||||||| ||||||  ||| |||||||||||| |||||||||||||||||||||| | |||||||||| | ||||||   |      
T  455168 accccttatcttctctaaaagttgcgattatgacccattttttgggacatgtggcgtcttctcagcaattttgggatgaaaggggccgaaattgtaaaaa 455267  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
          |||||||||||||||| |||||||||| |||| |||||  ||||||||| ||||||||    
T  455268 aaaattaatagggggccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtttagc 455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 173
Target Start/End: Complemental strand, 43982 - 43815
Alignment:
Q  6 ttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnnnn 105  Q
    |||||||  |||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||   | | ||| ||  |||| ||| |            
T  43982 ttatcttctcaaaaagttgcgactatggtccctgttttgggacacgtggcgtcttctcagcaattttgtgacggaagaggcaaaaactgccattttctta 43883  T
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatatttta 173  Q
    |||||||||||||||||| |||||||| |||| |||| ||||||||||| |||||| ||| |||||||    
T  43882 aatagggggccaaaattgaaacattttgaaacttaggaggcgaaaagtgcagtttaacctttatttta 43815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9173 - 9267
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    |||| |||||||| |||||||||| |||||| | |||||||||||||||||||| |||||||| ||||||||| | | |||||||| ||||||||    
T  9173 acccattatcttttcaaaaagttgcgattatgacccccttttttgggacacgtgacgtcttctaagcaattttgggacgaaaggggccaaaattg 9267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 112271 - 112429
Alignment:
Q  4 ccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgctannnnnn 103  Q
    |||||||||  |||||||||| | |||| | || |||||||||||| ||||||||||||| |||||||| | | ||||  || |||||||| ||          
T  112271 ccttatcttctcaaaaagttgcggttatggtccattttttgggacatgtggcgtcttctctgcaattttaggacgaaaaaggccaaaattg-taattttt 112369  T
Q  104 nnaatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagc 163  Q
      |||| || |||||||||||||||||||||||| | |||| ||||||||| ||||||||    
T  112370 ttaataaggagccaaaattgcaacattttaaaactttggggacgaaaagtgtagtttagc 112429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10062 - 10155
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||||||  |||||||||| ||||||  ||||||||||| |||| |||||||||||||| ||||||| | | |||||||  ||||||||    
T  10062 accccttatcttctcaaaaagttgcgattatttccccttttttgtgacatgtggcgtcttctcaacaattttgggacgaaagggaccaaaattg 10155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 10178 - 10229
Alignment:
Q  115 ccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagccta 166  Q
    ||||||| ||||| ||||||||| |||||| ||||||||| |||||||||||    
T  10178 ccaaaatcgcaacgttttaaaacttaggggtcgaaaagtgcagtttagccta 10229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 54512 - 54576
Alignment:
Q  2 ccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagca 67  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||| ||||||||||    
T  54512 ccccttatctttacaaaaagttgcgattatggcccc-tttttgggacatgtggcggcttctcagca 54576  T

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Target: scaffold0474 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 8129 - 8072
Alignment:
Q  15 caaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttt 72  Q
    |||||| ||| |||||| |||||| |||||||||||||||| ||||||||||||||||    
T  8129 caaaaatttgcgattatggcccctgttttgggacacgtggcatcttctcagcaatttt 8072  T

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Target: scaffold0174 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29857 - 29951
Alignment:
Q  1 accccttatctttacaaaaagttgtgattatagccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattgc 95  Q
    ||||||||||||  ||||||||||  ||||| ||| ||  ||||| ||  |||||||||||||||||||||| | | |||||||| |||||||||    
T  29857 accccttatcttctcaaaaagttgcaattatggcctctgatttggaacctgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgc 29951  T

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Target: scaffold0174; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 29938 - 29991
Alignment:
Q  111 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcc 164  Q
    ||||||||||||||||||||||||||| || ||| | ||||||| |||||||||    
T  29938 ggggccaaaattgcaacattttaaaacttaagggacaaaaagtgtagtttagcc 29991  T

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Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3091 - 2997
Alignment:
Q  1 accccttatctttacaaaaagttgtgattat-agccccttttttgggacacgtggcgtcttctcagcaatttttgaatgaaaggggtcaaaattg 94  Q
    ||||||||| |||||||||||||| |||||| | ||||||| | || ||| |||||||||||||  ||||||| | | |||||||| ||||||||    
T  3091 accccttatttttacaaaaagttgcgattatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaattg 2997  T

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Target: scaffold0187 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 4943 - 4983
Alignment:
Q  56 gtcttctcagcaatttttgaatgaaaggggtcaaaattgct 96  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  4943 gtcttctcagcaattttgggatgaaaggggtcaaaattgct 4983  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 39396 - 39334
Alignment:
Q  112 gggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctatattttat 174  Q
    |||||||||||| ||| ||||||||| || |||| |||||||| | |||||||||| ||||||    
T  39396 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattttttat 39334  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 49477 - 49537
Alignment:
Q  107 atagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgaagtttagcctat 167  Q
    ||||||||||||||||||||| |||| |||  || |||| |||||||| | ||||||||||    
T  49477 atagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctat 49537  T

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Target: scaffold0203 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 9620 - 9572
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||||| |||  |||| |||||||| |||||||    
T  9620 aatagggggccaaaattgcaacttttgcaaacttagggggcaaaaagtg 9572  T

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Target: scaffold0203; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 14994 - 14946
Alignment:
Q  106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtg 154  Q
    |||||||||||||||||||||| |||  |||| |||||||| |||||||    
T  14994 aatagggggccaaaattgcaacttttgcaaacttagggggcaaaaagtg 14946  T

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