View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9246_low_1 (Length: 1022)

Name: NF9246_low_1
Description: NF9246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9246_low_1
NF9246_low_1
[»] chr4 (53 HSPs)
chr4 (668-1003)||(1963469-1963804)
chr4 (377-556)||(1963192-1963370)
chr4 (15-173)||(23056934-23057092)
chr4 (371-556)||(1964368-1964552)
chr4 (250-354)||(23057169-23057273)
chr4 (381-546)||(10471325-10471489)
chr4 (381-546)||(25684934-25685098)
chr4 (381-556)||(1834119-1834294)
chr4 (380-546)||(13386469-13386635)
chr4 (380-546)||(10470545-10470710)
chr4 (372-550)||(1290131-1290308)
chr4 (380-546)||(5525359-5525523)
chr4 (378-546)||(25685759-25685926)
chr4 (379-546)||(5526063-5526228)
chr4 (379-556)||(1835029-1835205)
chr4 (402-546)||(46638662-46638805)
chr4 (379-550)||(17388144-17388313)
chr4 (381-485)||(10447006-10447110)
chr4 (379-546)||(13386012-13386180)
chr4 (378-486)||(48780245-48780352)
chr4 (379-490)||(17382991-17383100)
chr4 (377-512)||(21177993-21178126)
chr4 (384-550)||(12129626-12129791)
chr4 (380-550)||(31599788-31599956)
chr4 (376-550)||(31600919-31601091)
chr4 (380-546)||(48780983-48781147)
chr4 (377-486)||(19750572-19750679)
chr4 (377-486)||(19789127-19789234)
chr4 (379-457)||(49308052-49308129)
chr4 (377-550)||(1289093-1289265)
chr4 (381-514)||(50909641-50909774)
chr4 (374-550)||(10448194-10448368)
chr4 (378-478)||(26421627-26421725)
chr4 (384-463)||(8758856-8758935)
chr4 (373-485)||(13509357-13509467)
chr4 (377-512)||(55603503-55603635)
chr4 (380-462)||(3928878-3928960)
chr4 (384-486)||(35935530-35935631)
chr4 (395-483)||(27257960-27258047)
chr4 (379-486)||(52491604-52491710)
chr4 (378-487)||(8757672-8757779)
chr4 (377-457)||(37728590-37728669)
chr4 (384-485)||(8155741-8155840)
chr4 (380-457)||(3927665-3927742)
chr4 (380-484)||(14868889-14868990)
chr4 (380-484)||(14876944-14877045)
chr4 (377-457)||(49306771-49306850)
chr4 (380-431)||(20919582-20919633)
chr4 (383-434)||(52490468-52490519)
chr4 (391-485)||(21539069-21539162)
chr4 (378-447)||(1961162-1961231)
chr4 (394-447)||(2837149-2837202)
chr4 (381-434)||(51291419-51291472)
[»] chr3 (65 HSPs)
chr3 (668-1003)||(51037810-51038144)
chr3 (381-556)||(51037536-51037709)
chr3 (373-556)||(51038717-51038899)
chr3 (380-550)||(54540724-54540892)
chr3 (371-550)||(22776746-22776923)
chr3 (372-546)||(47610517-47610690)
chr3 (376-549)||(7758397-7758569)
chr3 (377-546)||(47609693-47609861)
chr3 (652-812)||(52104759-52104928)
chr3 (381-546)||(51469972-51470136)
chr3 (380-530)||(46721173-46721322)
chr3 (378-539)||(51470399-51470558)
chr3 (373-556)||(534491-534673)
chr3 (375-521)||(29932661-29932805)
chr3 (375-521)||(29981815-29981959)
chr3 (379-547)||(29931224-29931391)
chr3 (379-547)||(29980378-29980545)
chr3 (380-511)||(55191967-55192096)
chr3 (379-457)||(19984847-19984925)
chr3 (381-485)||(46719941-46720044)
chr3 (375-434)||(47615596-47615655)
chr3 (381-455)||(49216247-49216321)
chr3 (380-486)||(54539754-54539859)
chr3 (377-486)||(7267640-7267747)
chr3 (384-485)||(23770405-23770505)
chr3 (371-488)||(53616011-53616127)
chr3 (377-477)||(8875902-8876001)
chr3 (371-489)||(53614809-53614925)
chr3 (379-550)||(19986004-19986175)
chr3 (377-457)||(12700171-12700249)
chr3 (373-457)||(23769849-23769933)
chr3 (377-484)||(5029682-5029787)
chr3 (379-550)||(51347266-51347436)
chr3 (371-485)||(12703498-12703610)
chr3 (384-464)||(40426796-40426877)
chr3 (381-485)||(47614185-47614288)
chr3 (381-464)||(53901406-53901487)
chr3 (379-550)||(7268761-7268929)
chr3 (377-500)||(39844178-39844302)
chr3 (378-464)||(52281565-52281651)
chr3 (382-547)||(8456479-8456642)
chr3 (379-464)||(28262191-28262275)
chr3 (379-464)||(28263129-28263214)
chr3 (400-457)||(34019170-34019227)
chr3 (379-464)||(52276302-52276387)
chr3 (380-484)||(24516459-24516562)
chr3 (375-464)||(18456081-18456171)
chr3 (388-434)||(22775783-22775828)
chr3 (380-486)||(52839036-52839141)
chr3 (379-456)||(5001198-5001275)
chr3 (380-464)||(18442629-18442714)
chr3 (380-464)||(19487703-19487788)
chr3 (381-486)||(52840601-52840705)
chr3 (381-429)||(535835-535883)
chr3 (390-458)||(6170281-6170349)
chr3 (381-429)||(25336358-25336406)
chr3 (384-428)||(39843054-39843098)
chr3 (381-464)||(8338940-8339023)
chr3 (660-711)||(11670704-11670755)
chr3 (378-428)||(11671395-11671444)
chr3 (462-550)||(26722612-26722699)
chr3 (462-550)||(26723795-26723882)
chr3 (379-421)||(31039253-31039295)
chr3 (384-485)||(54987005-54987103)
chr3 (405-458)||(6249633-6249686)
[»] scaffold0321 (2 HSPs)
scaffold0321 (383-556)||(18730-18902)
scaffold0321 (394-556)||(19337-19498)
[»] chr7 (40 HSPs)
chr7 (378-546)||(3227531-3227698)
chr7 (376-546)||(31949317-31949486)
chr7 (383-546)||(17781663-17781825)
chr7 (369-550)||(11658367-11658547)
chr7 (379-539)||(31949746-31949905)
chr7 (381-546)||(47525304-47525468)
chr7 (382-546)||(3227109-3227271)
chr7 (378-539)||(127334-127492)
chr7 (384-539)||(128545-128699)
chr7 (384-511)||(11662523-11662649)
chr7 (377-556)||(30439285-30439462)
chr7 (378-464)||(22630470-22630556)
chr7 (381-486)||(31659622-31659727)
chr7 (379-485)||(42886284-42886389)
chr7 (371-478)||(17782558-17782665)
chr7 (381-485)||(18371424-18371527)
chr7 (379-485)||(21505414-21505517)
chr7 (375-490)||(48934896-48935010)
chr7 (380-485)||(7500454-7500557)
chr7 (378-485)||(7501850-7501956)
chr7 (379-485)||(22629481-22629589)
chr7 (394-483)||(18372457-18372544)
chr7 (380-453)||(20163585-20163658)
chr7 (660-755)||(30439085-30439181)
chr7 (380-464)||(31661027-31661111)
chr7 (386-485)||(14999153-14999249)
chr7 (379-432)||(32253448-32253501)
chr7 (380-485)||(47369780-47369884)
chr7 (378-455)||(34174010-34174086)
chr7 (378-429)||(21508457-21508506)
chr7 (375-434)||(27869190-27869249)
chr7 (380-463)||(39182156-39182238)
chr7 (388-455)||(47524532-47524599)
chr7 (376-434)||(5490926-5490984)
chr7 (380-434)||(20636869-20636923)
chr7 (379-457)||(48933666-48933743)
chr7 (380-417)||(5111441-5111478)
chr7 (380-421)||(9822330-9822371)
chr7 (380-421)||(10724255-10724296)
chr7 (372-429)||(42303402-42303459)
[»] scaffold0003 (3 HSPs)
scaffold0003 (379-546)||(49370-49536)
scaffold0003 (379-512)||(39342-39474)
scaffold0003 (377-432)||(43560-43615)
[»] chr6 (41 HSPs)
chr6 (379-546)||(27437826-27437992)
chr6 (378-546)||(8659262-8659429)
chr6 (380-546)||(3721611-3721776)
chr6 (380-546)||(8660141-8660305)
chr6 (379-539)||(34834523-34834682)
chr6 (376-457)||(16704522-16704603)
chr6 (375-486)||(8821867-8821977)
chr6 (377-459)||(6842306-6842388)
chr6 (381-478)||(8822798-8822894)
chr6 (379-486)||(10784590-10784697)
chr6 (384-514)||(1829572-1829701)
chr6 (371-488)||(30495692-30495807)
chr6 (379-484)||(27322067-27322170)
chr6 (386-487)||(29473082-29473182)
chr6 (379-434)||(7316342-7316397)
chr6 (377-464)||(14822356-14822443)
chr6 (381-550)||(7314880-7315047)
chr6 (377-433)||(3722556-3722612)
chr6 (380-486)||(3333023-3333128)
chr6 (394-512)||(10785884-10786000)
chr6 (378-440)||(16415575-16415637)
chr6 (379-512)||(27447884-27448016)
chr6 (381-464)||(16703570-16703650)
chr6 (377-485)||(17496789-17496901)
chr6 (383-434)||(26717132-26717183)
chr6 (377-432)||(27443746-27443801)
chr6 (405-486)||(26575051-26575131)
chr6 (370-457)||(6840183-6840268)
chr6 (380-488)||(20973294-20973401)
chr6 (369-421)||(26239945-26239997)
chr6 (377-515)||(26574615-26574751)
chr6 (379-464)||(14823593-14823679)
chr6 (379-484)||(27318313-27318418)
chr6 (406-483)||(12350823-12350898)
chr6 (490-546)||(3722460-3722516)
chr6 (378-434)||(22968404-22968460)
chr6 (378-434)||(23819933-23819989)
chr6 (406-546)||(34830927-34831066)
chr6 (378-433)||(13345549-13345603)
chr6 (384-486)||(5658759-5658860)
chr6 (377-463)||(32451948-32452034)
[»] chr2 (45 HSPs)
chr2 (372-514)||(36449769-36449910)
chr2 (379-487)||(38840489-38840596)
chr2 (379-556)||(18797244-18797421)
chr2 (381-546)||(1034407-1034570)
chr2 (377-479)||(7899886-7899987)
chr2 (372-482)||(18904358-18904467)
chr2 (372-485)||(23869533-23869644)
chr2 (377-548)||(11938725-11938893)
chr2 (377-550)||(1093080-1093250)
chr2 (380-485)||(22587952-22588055)
chr2 (371-547)||(26545457-26545632)
chr2 (379-550)||(7898689-7898858)
chr2 (413-556)||(11996739-11996881)
chr2 (377-463)||(18906006-18906092)
chr2 (380-550)||(22848190-22848359)
chr2 (377-487)||(36450917-36451025)
chr2 (377-487)||(38839238-38839347)
chr2 (373-550)||(41879146-41879321)
chr2 (395-454)||(5819741-5819800)
chr2 (380-485)||(11258809-11258913)
chr2 (377-490)||(16446150-16446262)
chr2 (380-457)||(802616-802692)
chr2 (373-457)||(18300749-18300831)
chr2 (381-485)||(18299373-18299476)
chr2 (380-464)||(32739622-32739706)
chr2 (384-549)||(13567975-13568137)
chr2 (378-457)||(18868921-18869000)
chr2 (381-487)||(41878092-41878199)
chr2 (378-447)||(28365509-28365577)
chr2 (382-485)||(13030293-13030392)
chr2 (384-490)||(8535649-8535752)
chr2 (380-547)||(11257621-11257786)
chr2 (384-447)||(13830270-13830332)
chr2 (372-547)||(26544140-26544313)
chr2 (380-482)||(13570558-13570659)
chr2 (405-550)||(22587525-22587667)
chr2 (394-453)||(5362188-5362247)
chr2 (384-490)||(8534586-8534689)
chr2 (380-434)||(21837303-21837355)
chr2 (380-464)||(22067800-22067886)
chr2 (443-521)||(1091757-1091834)
chr2 (505-546)||(1033322-1033363)
chr2 (374-447)||(11176145-11176218)
chr2 (380-441)||(26829329-26829390)
chr2 (405-485)||(28617946-28618024)
[»] chr1 (59 HSPs)
chr1 (380-546)||(52827346-52827511)
chr1 (379-488)||(35066997-35067105)
chr1 (381-546)||(41364829-41364992)
chr1 (381-530)||(51684366-51684514)
chr1 (377-547)||(24422796-24422965)
chr1 (377-546)||(52828007-52828175)
chr1 (375-556)||(35595119-35595300)
chr1 (377-485)||(51685763-51685870)
chr1 (377-550)||(11437132-11437304)
chr1 (377-485)||(45149968-45150075)
chr1 (379-547)||(12389918-12390084)
chr1 (380-556)||(35594216-35594389)
chr1 (372-485)||(45148572-45148683)
chr1 (380-486)||(33088614-33088719)
chr1 (384-550)||(39153050-39153214)
chr1 (380-486)||(52274967-52275072)
chr1 (381-486)||(39699764-39699867)
chr1 (380-550)||(11436041-11436210)
chr1 (379-457)||(14999283-14999360)
chr1 (384-486)||(24426072-24426173)
chr1 (380-546)||(41366068-41366232)
chr1 (372-482)||(43058777-43058885)
chr1 (380-550)||(36612852-36613020)
chr1 (36-134)||(38336812-38336909)
chr1 (381-486)||(36613901-36614005)
chr1 (376-457)||(39151926-39152007)
chr1 (380-457)||(45157234-45157310)
chr1 (375-463)||(46066519-46066605)
chr1 (461-550)||(46524618-46524706)
chr1 (461-550)||(46525734-46525822)
chr1 (377-457)||(43060031-43060111)
chr1 (378-485)||(23980464-23980570)
chr1 (379-512)||(16290091-16290224)
chr1 (381-462)||(39222493-39222575)
chr1 (373-485)||(37526876-37526986)
chr1 (379-547)||(52276099-52276266)
chr1 (378-429)||(11190382-11190433)
chr1 (459-530)||(17505038-17505109)
chr1 (384-458)||(45156052-45156126)
chr1 (379-485)||(50680330-50680434)
chr1 (384-457)||(30249515-30249588)
chr1 (380-457)||(39698562-39698639)
chr1 (381-429)||(50681657-50681705)
chr1 (379-486)||(7983048-7983153)
chr1 (708-755)||(46524850-46524897)
chr1 (379-457)||(7674526-7674602)
chr1 (379-485)||(7675457-7675561)
chr1 (384-485)||(43378711-43378810)
chr1 (374-430)||(2260629-2260685)
chr1 (462-550)||(14512556-14512643)
chr1 (380-427)||(39221357-39221405)
chr1 (380-464)||(44404441-44404525)
chr1 (380-463)||(4059521-4059604)
chr1 (380-454)||(14999983-15000057)
chr1 (381-434)||(16281318-16281371)
chr1 (381-434)||(29182001-29182054)
chr1 (660-721)||(46066822-46066883)
chr1 (737-795)||(46524900-46524958)
chr1 (808-853)||(46524945-46524990)
[»] chr5 (46 HSPs)
chr5 (377-550)||(28538672-28538843)
chr5 (384-556)||(42195137-42195306)
chr5 (370-546)||(5778773-5778948)
chr5 (377-485)||(25523065-25523172)
chr5 (373-556)||(42196127-42196309)
chr5 (379-550)||(16650788-16650958)
chr5 (379-550)||(25055410-25055580)
chr5 (376-490)||(20216756-20216869)
chr5 (381-550)||(20214196-20214363)
chr5 (375-486)||(5777895-5778003)
chr5 (379-485)||(18486900-18487005)
chr5 (384-550)||(24332916-24333080)
chr5 (380-550)||(36486422-36486590)
chr5 (380-485)||(19752911-19753014)
chr5 (381-457)||(22940647-22940723)
chr5 (370-487)||(40255668-40255784)
chr5 (381-556)||(25056307-25056482)
chr5 (380-486)||(21835040-21835144)
chr5 (384-550)||(28539754-28539917)
chr5 (380-485)||(1015483-1015587)
chr5 (375-488)||(38834081-38834192)
chr5 (374-514)||(36485293-36485432)
chr5 (379-478)||(33160291-33160389)
chr5 (368-446)||(2373134-2373212)
chr5 (379-457)||(18154492-18154569)
chr5 (373-447)||(20653812-20653886)
chr5 (377-447)||(38476715-38476785)
chr5 (381-490)||(1796054-1796162)
chr5 (380-457)||(33158097-33158174)
chr5 (379-429)||(5730439-5730490)
chr5 (379-485)||(19754128-19754234)
chr5 (381-460)||(21834941-21835019)
chr5 (410-539)||(5730806-5730934)
chr5 (376-477)||(7311585-7311685)
chr5 (379-457)||(25524152-25524231)
chr5 (380-434)||(31576610-31576664)
chr5 (372-429)||(2373401-2373458)
chr5 (660-716)||(2686141-2686197)
chr5 (383-431)||(15885132-15885180)
chr5 (374-434)||(23040287-23040347)
chr5 (660-719)||(42195953-42196011)
chr5 (404-486)||(1797294-1797375)
chr5 (384-458)||(2186774-2186847)
chr5 (380-434)||(18485137-18485191)
chr5 (405-455)||(34893689-34893739)
chr5 (381-450)||(2188962-2189030)
[»] scaffold2034 (2 HSPs)
scaffold2034 (381-550)||(233-400)
scaffold2034 (402-550)||(912-1058)
[»] chr8 (53 HSPs)
chr8 (381-550)||(22220388-22220556)
chr8 (379-530)||(8389642-8389792)
chr8 (380-556)||(22221291-22221466)
chr8 (380-556)||(22227633-22227808)
chr8 (379-530)||(11282006-11282156)
chr8 (380-487)||(12351920-12352026)
chr8 (379-485)||(5513980-5514084)
chr8 (379-485)||(10007761-10007866)
chr8 (384-550)||(11287779-11287943)
chr8 (375-483)||(29043392-29043499)
chr8 (380-547)||(43661759-43661925)
chr8 (380-484)||(8388463-8388564)
chr8 (369-485)||(10006334-10006447)
chr8 (372-485)||(24122874-24122985)
chr8 (380-487)||(12353357-12353461)
chr8 (380-547)||(30335638-30335804)
chr8 (377-500)||(42982640-42982762)
chr8 (381-447)||(36249552-36249618)
chr8 (383-485)||(43661267-43661368)
chr8 (380-485)||(1823551-1823655)
chr8 (380-485)||(1857996-1858100)
chr8 (381-521)||(11283171-11283310)
chr8 (372-485)||(24123896-24124005)
chr8 (384-486)||(29968334-29968434)
chr8 (382-463)||(18979139-18979220)
chr8 (373-434)||(32968448-32968509)
chr8 (376-440)||(11456633-11456697)
chr8 (390-486)||(18978029-18978123)
chr8 (377-485)||(30568883-30568989)
chr8 (380-464)||(38980062-38980146)
chr8 (380-464)||(39011159-39011243)
chr8 (386-477)||(1824084-1824174)
chr8 (386-477)||(1858529-1858619)
chr8 (381-464)||(38974795-38974878)
chr8 (381-464)||(39005893-39005976)
chr8 (656-749)||(24360938-24361030)
chr8 (380-457)||(32207350-32207425)
chr8 (378-550)||(2379857-2380024)
chr8 (377-434)||(36337621-36337678)
chr8 (390-514)||(18970920-18971042)
chr8 (384-520)||(40471110-40471244)
chr8 (370-432)||(7117366-7117428)
chr8 (379-428)||(11288914-11288963)
chr8 (381-434)||(24483143-24483196)
chr8 (381-434)||(32973984-32974037)
chr8 (380-429)||(45114569-45114618)
chr8 (667-755)||(2379321-2379416)
chr8 (381-464)||(34625218-34625303)
chr8 (462-512)||(45112949-45112999)
chr8 (381-434)||(3819489-3819541)
chr8 (381-458)||(30336525-30336602)
chr8 (384-485)||(30570254-30570353)
chr8 (379-432)||(36250906-36250959)
[»] scaffold1303 (1 HSPs)
scaffold1303 (379-556)||(1437-1613)
[»] scaffold0302 (2 HSPs)
scaffold0302 (378-514)||(17467-17602)
scaffold0302 (381-463)||(18795-18877)
[»] scaffold0632 (1 HSPs)
scaffold0632 (377-486)||(3305-3412)
[»] scaffold0294 (2 HSPs)
scaffold0294 (378-479)||(5442-5542)
scaffold0294 (379-520)||(4440-4580)
[»] scaffold0019 (2 HSPs)
scaffold0019 (381-550)||(60090-60258)
scaffold0019 (382-550)||(61392-61559)
[»] scaffold0320 (1 HSPs)
scaffold0320 (372-485)||(19479-19591)
[»] scaffold0049 (2 HSPs)
scaffold0049 (371-486)||(7412-7526)
scaffold0049 (381-460)||(7538-7616)
[»] scaffold0586 (2 HSPs)
scaffold0586 (376-477)||(6338-6438)
scaffold0586 (379-463)||(9045-9128)
[»] scaffold0227 (1 HSPs)
scaffold0227 (375-464)||(137-226)
[»] scaffold0369 (1 HSPs)
scaffold0369 (371-457)||(13183-13267)
[»] scaffold0186 (2 HSPs)
scaffold0186 (371-486)||(23071-23183)
scaffold0186 (373-429)||(23943-23999)
[»] scaffold0093 (2 HSPs)
scaffold0093 (382-464)||(2483-2564)
scaffold0093 (382-464)||(7106-7187)
[»] scaffold0112 (1 HSPs)
scaffold0112 (381-533)||(37148-37298)
[»] scaffold0045 (3 HSPs)
scaffold0045 (381-429)||(49137-49185)
scaffold0045 (518-556)||(49000-49038)
scaffold0045 (503-556)||(48427-48480)
[»] scaffold0002 (2 HSPs)
scaffold0002 (400-434)||(15706-15740)
scaffold0002 (378-439)||(454926-454987)


Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-148; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 668 - 1003
Target Start/End: Original strand, 1963469 - 1963804
Alignment:
Q  668 tctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaaatattacatgaatcttttcaacaacaacaacaatcttcatnnnnnnnt 767  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||       |    
T  1963469 tctccttcattttcttaacagcttcattttcttctcaaccaaaacccagaaaatataacatgaatcttttcaacaacaacaacaatcttcataaaaaatt 1963568  T
Q  768 ccagaaaatcatctcagaaacccaaattagggacttaacccaaaaacccaaattgtttctgttcgattttcaaaagctattccgacttgtatcatcaatt 867  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  1963569 ccagaaaatcatctcaaaaacccaaattagggatttaacccaaaaacccaaattgtttctgttcgattttcaatagctattccgactggtatcatcaatt 1963668  T
Q  868 cgatttggcgtttctactgtcattgtttgtctatttcaatttcgcgttttgatttgattctttctgatttttgtttcacatatctttgtttctgcaaaat 967  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  1963669 cgatttggcgtttctattgtcattgtttgtctatttcaatttcgctttttgatttgattctttctgagttttgtctcacatatctttgtttctgcaaaat 1963768  T
Q  968 cgattttcttcatctcctacattgtcatattcactt 1003  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1963769 cgattttcttcatctcctacactgtcatattcactt 1963804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 377 - 556
Target Start/End: Original strand, 1963192 - 1963370
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||||||||||||||| ||||||||||||    
T  1963192 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagcccc-ctaagaattagc 1963290  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1963291 ccctttgcaatagtggtcctttttagcaattttgaccgagtcaacactgatttggcatgccacatgtgtaattagccatt 1963370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 23056934 - 23057092
Alignment:
Q  15 cagagaagaaaaggaggcaaggtggttggagaagatgaggtggggtggtgaggatggaagagtttgagtagattcgatggtgggggtgaacgacggtggt 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||||    
T  23056934 cagagaagaaaaggaggcaaggtggtcggagaagatgaggtggggtggtgaggatggaaaaatttgagtagatccggtggtgggggtgaacgacggtggt 23057033  T
Q  115 gaggagaaggatgggtgatgatggtgtttgattcagtgggtatggtggccagtgagggt 173  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||    
T  23057034 gaggagaaggatgagtgatgatggtgtttgattcggtgggtacggtggccaatgagggt 23057092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 1964552 - 1964368
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| ||| ||||||||||||||||||| ||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||| | |||  |||||    
T  1964552 ataaacttttggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtccct-taaga 1964454  T
Q  471 attagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  1964453 attatcccctttgcgatagtggtcctttttagcaattttgaccaagtcaacgctgatttggcatgccacgtgtgtaattaaccatt 1964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 23057169 - 23057273
Alignment:
Q  250 ttgttgagtgtttgtgtcaacaacatatttagaaatttcaacttgagagggcaagatcatgtacacacaaactcaagataaaatgatgatattgttatct 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  23057169 ttgttgagtgtttgtgtcaacaacatatttagaaatttcaacttgagagggcaagatcatttatacacaaactcaagataaaatgatgatatcgttatct 23057268  T
Q  350 ttgac 354  Q
    |||||    
T  23057269 ttgac 23057273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 381 - 546
Target Start/End: Complemental strand, 10471489 - 10471325
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || | || ||||| |||| |||||||||||||||| ||||||||     
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccctaagatttagcccca 10471391  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  10471390 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 10471325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 381 - 546
Target Start/End: Original strand, 25684934 - 25685098
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||  || | || ||||| ||||||| ||||||||||||| ||||||||     
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt-agcccccctaagatttagcccca 25685032  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  25685033 ttgcaactttggtccttttgatcaattttgaccaagtcaacgctgatttggcatgccacatgtgta 25685098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 381 - 556
Target Start/End: Original strand, 1834119 - 1834294
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||  ||||||| ||||| || ||||||||||||| |||| | ||||||||||||||| |||||||||||| ||||||| |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||    ||||| ||||   ||||||||||| | ||||  |||||||||||||||||||||||||||| |||||    
T  1834219 ttgcatctttggtccttttggtcaattttgaccaaatcaatgctgatttggcatgccacgtgtgtaattaaccatt 1834294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 13386635 - 13386469
Alignment:
Q  380 aggctaaagtgcactttt-ccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| | || ||||| ||||||| |||||||||||||  ||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaattt-agcccccctaagatctagccc 13386537  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    | ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  13386536 cattgcaactttggtccttttgaccaattttgaccaagtcaacgctgatttggcatgccacatgtgta 13386469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 10470545 - 10470710
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||  || | || ||||  |||| |||||||||||||||| ||||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaa-tttagcccccctaagatttagcccc 10470643  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  10470644 attgcaactttggtccttttgatcaattttgaccaagtcaacgctgatatggcatgccacatgtgta 10470710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 372 - 550
Target Start/End: Complemental strand, 1290308 - 1290131
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||  || | |||||||||||||||||||| |||||||||     
T  1290308 taaaacttaggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagc-cccctaagat 1290210  T
Q  472 ttagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||| ||||||||||    ||||| ||||   ||||||||||||||||||| |  |  ||||||||||| ||||||||||    
T  1290209 ttaacccctttgcatctttggtccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtgtaatta 1290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 5525359 - 5525523
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||| || ||||||||||| |||||||||||| |||||||||||||||| || | || ||||| ||||||| ||||||||||||| ||||||||    
T  5525359 aggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt-agcccccctaagatttagcccc 5525456  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  5525457 attgcaactttggtccttttgaccaattttgaccaagtcaacgctgatttggcatgccacatgtgta 5525523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 378 - 546
Target Start/End: Complemental strand, 25685926 - 25685759
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| |||| ||||| |||||||||| ||||||    
T  25685926 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagaccccctaagatttagcc 25685828  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    || ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  25685827 ccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 25685759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 5526228 - 5526063
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||| |||| || | |  ||||| ||||||| ||||||||||||| |||||||    
T  5526228 taggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaattt-agcccccctaagatttagccc 5526131  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    | |||||||  ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  5526130 cattgcaattttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 5526063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 379 - 556
Target Start/End: Complemental strand, 1835205 - 1835029
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||||  || ||||||||||||| |||||||||||||||| || | |  |||||||||||||| | |||||||||| |||||||    
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt-gaccccctaagatttagccc 1835107  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||||    ||||| ||||   ||||||||||   |||||| || ||||||||||||||||||||||||| |||||    
T  1835106 ctttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaattaaccatt 1835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 402 - 546
Target Start/End: Complemental strand, 46638805 - 46638662
Alignment:
Q  402 ccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcattttta 501  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||| ||||||||| |||| ||||||||||   | ||| |||| |    
T  46638805 ccttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagc-cccctaagatttagtccctttgcaactttagtctttttga 46638707  T
Q  502 gcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||||||  ||||||| ||||||||||||| |||| |||||    
T  46638706 tcaattttgacaaagtcaacgctgatttggcatgtcacgcgtgta 46638662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 379 - 550
Target Start/End: Complemental strand, 17388313 - 17388144
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||  ||| || | ||| ||||||||||||| ||||||| ||||||||||||    
T  17388313 taggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggcccccc-aagaattagccc 17388216  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||| ||||||| ||| |||    ||||||||||   |||||| |  || ||||| ||||||||||||||||    
T  17388215 ctttacaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggccacgtgtgtaatta 17388144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 10447006 - 10447110
Alignment:
Q  381 ggctaaagtgcacttttccccc-cttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||| |||||||| ||||||||| ||||||||||| ||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaatttta-cccccctaagatttagcccc 10447104  T
Q  480 tttgca 485  Q
    ||||||    
T  10447105 tttgca 10447110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 379 - 546
Target Start/End: Original strand, 13386012 - 13386180
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaag-ttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||||||| |||| || | || ||||| |||||||   ||||||||||| ||||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     | ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  13386112 tcattgcaactttggtccttttgatcaattttgacctagtcaacgctgatatggcatgccacatgtgta 13386180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 378 - 486
Target Start/End: Original strand, 48780245 - 48780352
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| || | || ||||| |||| |||||||||||||||| ||||||    
T  48780245 ttaggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttagcccccctaagatttagcc 48780343  T
Q  478 cctttgcaa 486  Q
    || ||||||    
T  48780344 ccattgcaa 48780352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 379 - 490
Target Start/End: Original strand, 17382991 - 17383100
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||  ||| || | ||||||||||||||||| ||||||| |||||||| |||    
T  17382991 taggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggcccccc-aagaattatccc 17383088  T
Q  479 ctttgcaatagt 490  Q
    ||||||||||||    
T  17383089 ctttgcaatagt 17383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 377 - 512
Target Start/End: Original strand, 21177993 - 21178126
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||| ||||| ||||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||| | |||||||| | |||||    
T  21177993 tttaggctaaagtgtactttccccccct-aactttcataaagttgcaattttgatcccctatgaacaaaaactacaatttt-gaccccctaaaatttagc 21178090  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgac 512  Q
    || |||||||   || ||||||||  ||||||||||    
T  21178091 ccttttgcaactttgatcatttttgccaattttgac 21178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 384 - 550
Target Start/End: Original strand, 12129626 - 12129791
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| |||| || | ||||||||||||||||| | |||| ||||| ||||||| ||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaatttt-gaccccttaagatttagcccatttg 12129724  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||    |||||||||| | ||||||||||  | ||||| |  |  ||||| ||||||||||||||||    
T  12129725 catctttggtcattttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaatta 12129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 380 - 550
Target Start/End: Original strand, 31599788 - 31599956
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||| |||||||||||| ||||| ||||||| ||||| |||||||||||||||| || | ||||||||||||||||| |  ||||||||| ||||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt-ggtcccctaagatttagcccc 31599886  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||   || || |||||  |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  31599887 tttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 31599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 376 - 550
Target Start/End: Complemental strand, 31601091 - 31600919
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    |||| ||||||||||||||||| ||||  ||||||| ||||| |||||||||||||||| || | ||||||||||||||||| | |||| ||||| ||||    
T  31601091 attttggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt-gaccccttaagatttag 31600993  T
Q  476 cccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||| |||||||   || || |||||  |||||||||||| |||||  |  || ||||||||||||||||||||||    
T  31600992 cccatttgcaactttgatcctttttgtcaattttgaccg-gtcaatgcctatgtggcatgccacgtgtgtaatta 31600919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 48781147 - 48780983
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||  ||| || | || ||||| |||| |||||||||||||| | ||||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccc-taagtactaaaaccacaa-tttagcccccctaaaatttagcccc 48781050  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   |||||||||| |  |||||||||| |||||||  |||| ||||||||||| ||||||    
T  48781049 attgcaactttggtcattttgacaaattttgacctagtcaacgatgatatggcatgccacatgtgta 48780983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 377 - 486
Target Start/End: Complemental strand, 19750679 - 19750572
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |||| || | |||||||||||||||||| ||||||||||| |||||    
T  19750679 tttagactaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttta-cccccctaagatttagc 19750582  T
Q  477 ccctttgcaa 486  Q
    ||| ||||||    
T  19750581 cccattgcaa 19750572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 377 - 486
Target Start/End: Original strand, 19789127 - 19789234
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |||| || | |||||||||||||||||| ||||||||||| |||||    
T  19789127 tttagactaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttta-cccccctaagatttagc 19789224  T
Q  477 ccctttgcaa 486  Q
    ||| ||||||    
T  19789225 cccattgcaa 19789234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 379 - 457
Target Start/End: Complemental strand, 49308129 - 49308052
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| || | |||||||||||||||||    
T  49308129 taggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 49308052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 377 - 550
Target Start/End: Original strand, 1289093 - 1289265
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| ||||||| |||||||||||||||||||||||| | ||| |||||||| ||  || | | ||||||||||||||||| || | ||||| ||| |    
T  1289093 tttaggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttag-cctcttaagatttaac 1289191  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||| |||||    ||||| ||||   ||||||||||||||||||| || |  ||||||||||||||| ||||||    
T  1289192 ccccttgcatctttggtccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgtataatta 1289265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 50909774 - 50909641
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||| || || ||| ||| |||||||||| |||||||| || |||| | |||||||||||||||  ||||| ||||| |||||||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccct 50909675  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccg 514  Q
    |||||    ||||| |||| | ||||||||||||    
T  50909674 ttgcatctttggtccttttgatcaattttgaccg 50909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 374 - 550
Target Start/End: Complemental strand, 10448368 - 10448194
Alignment:
Q  374 aaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatt 473  Q
    ||||||||||||||||||||||  || ||| ||| |||||||||||||| |||||  |||| |||| ||||||||||||||||| | ||| ||||||  |    
T  10448368 aaatttaggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaatttt-ggccctctaagatat 10448270  T
Q  474 agcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||||||||    ||||| ||||   ||||||||||| ||||||  |  |  ||||||||||||||||||||||    
T  10448269 agcccctttgcatctttggtccttttggccaattttgacc-agtcaatgcctacgtggcatgccacgtgtgtaatta 10448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 26421725 - 26421627
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||| | || | ||||||||||||||||| | |||| ||||| ||||||    
T  26421725 ttaggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaatttt-gaccccttaagatttagcc 26421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 8758935 - 8758856
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||| || | ||| ||||||||||||| |||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggcccc 8758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 13509467 - 13509357
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||| ||||  | | |  |||||||||||||| |  ||||||||| |    
T  13509467 aaaatttaggctaaagtgtacttttcccccc-taacttttaaaaaattgcaattttggccccccaagtatgaaaactacaatttt-gatcccctaagatt 13509370  T
Q  473 tagcccctttgca 485  Q
    |||||||||||||    
T  13509369 tagcccctttgca 13509357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 512
Target Start/End: Complemental strand, 55603635 - 55603503
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| |||||||||||||| |||| |||||||||||||| |||||||||| | ||| | || ||||||||||| ||||| ||||||  |||||| |||    
T  55603635 tttaggttaaagtgcactttttcccc-ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc--aagaataagc 55603539  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgac 512  Q
     | ||||||||||| ||| ||| |  ||||||||||    
T  55603538 tcatttgcaatagtagtcctttatgtcaattttgac 55603503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 3928960 - 3928878
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccc 462  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||| |||| |||| |  ||||| |||||||| ||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccc 3928878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 486
Target Start/End: Complemental strand, 35935631 - 35935530
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||  |||| || | ||| ||||||||||||| | |||||||||| |||||| | |||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaatttt-ggccccctaagatttagcctcattg 35935533  T
Q  484 caa 486  Q
    |||    
T  35935532 caa 35935530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 395 - 483
Target Start/End: Complemental strand, 27258047 - 27257960
Alignment:
Q  395 tttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||| |||||||||||| |||||||||||||||||||||  |||  ||||||||| ||||||||  |||| ||||| ||||||||||||    
T  27258047 tttctccccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaatttta-accccttaagatttagcccctttg 27257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 379 - 486
Target Start/End: Complemental strand, 52491710 - 52491604
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||||  ||  ||   ||| ||||||||||||| | |||||||| | |||||||    
T  52491710 taggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaatttt-ggccccctaaaatttagccc 52491612  T
Q  479 ctttgcaa 486  Q
    | ||||||    
T  52491611 cattgcaa 52491604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 487
Target Start/End: Original strand, 8757672 - 8757779
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||| |||| |||||||||||||| || |||||||  |||| || | ||| ||||||||||||| |  ||| ||||| ||||||    
T  8757672 ttaggctaaagtgcactttttcccc-ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaatttt-ggacccttaagatttagcc 8757769  T
Q  478 cctttgcaat 487  Q
    || |||||||    
T  8757770 ccattgcaat 8757779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 37728669 - 37728590
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||| ||||||||| |||| || ||| |||||| ||||||||||||||||| || | |||| |||||||||||||||||    
T  37728669 tttaggttaaagtgcattttttcctcct-aacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaatttt 37728590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 8155741 - 8155840
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaatttt-gaccccatatgaacaaaaactacaattttagcccccctaagaattagccccttt 482  Q
    |||||||||||||||||||  ||||||||||||| |||||||||| |  ||| || |  |||||||||||||||| | |||||||||| |||||| ||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaatttt-ggccccctaagatttagccgcttt 8155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 3927665 - 3927742
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||||||||  ||||||| |||| ||||| |||||| ||||  ||| |  ||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaatttt 3927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 14868889 - 14868990
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||| |||  || | |  ||||| |||||||   ||||||||||||||||||||    
T  14868889 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt--ccccccctaagaattagcccc 14868985  T
Q  480 tttgc 484  Q
     ||||    
T  14868986 attgc 14868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 484
Target Start/End: Complemental strand, 14877045 - 14876944
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||| |||  || | |  ||||| |||||||   ||||||||||||||||||||    
T  14877045 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt--ccccccctaagaattagcccc 14876949  T
Q  480 tttgc 484  Q
     ||||    
T  14876948 attgc 14876944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 49306771 - 49306850
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||||||  ||||  |||||||||||| ||||||||||| ||   || | |||||||||||||||||    
T  49306771 tttaggctaaagtgcacttttttcccc-caactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 20919633 - 20919582
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgac 431  Q
    ||||||||||||| ||||| |||||||| ||| |||||||||| ||||||||    
T  20919633 aggctaaagtgcatttttcaccccttaagttttaaaaagttgcgattttgac 20919582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 434
Target Start/End: Original strand, 52490468 - 52490519
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||| |||||| | ||||| |||||||| |||||||||||||||||    
T  52490468 ctaaagtgcaattttccgctcttaagtttcaaaatgttgcaattttgacccc 52490519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 21539162 - 21539069
Alignment:
Q  391 cacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgca 485  Q
    ||||||||| ||||||| ||| ||||| ||||||||||| || | || |   ||||||||||||||| | |||||||||| ||||| ||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaatttt-gaccccctaagatttagctcctttgca 21539069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 1961231 - 1961162
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||||||||||||||||||  |||| ||| |||  |||||||||||||||| |||| ||| || |||||    
T  1961231 ttaggctaaagtgcactttttaccccctaagtttgcaaaagttgcaattttggccccctattaaaaaaaa 1961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 2837202 - 2837149
Alignment:
Q  394 ttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||| ||||||||||||||| |||||||||||||| |||| || ||| |||||    
T  2837202 ttttcgccccttaactttcaagaagttgcaattttggccccctaagaaaaaaaa 2837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 51291472 - 51291419
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||| || ||||| |||||||| ||| ||||||||||||||||| ||||    
T  51291472 ggctaaagtccaattttcaccccttaagttttaaaaagttgcaattttggcccc 51291419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 668 - 1003
Target Start/End: Original strand, 51037810 - 51038144
Alignment:
Q  668 tctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaaatattacatgaatcttttcaacaacaacaacaatcttcatnnnnnnnt 767  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||       |    
T  51037810 tctccttcattttcttaacagcttcattttcttctcaaccaaaacccagaaaatataacatgaatcttttcaacaacaacaacaatcttcataaaaaaat 51037909  T
Q  768 ccagaaaatcatctcagaaacccaaattagggacttaacccaaaaacccaaattgtttctgttcgattttcaaaagctattccgacttgtatcatcaatt 867  Q
     ||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51037910 tcagaaaatcatctcaaaaatccaaattaaggatttaacccaaaaacccaaattgtttctgttcgattttcaatagctattccgacttgtatcatcaatt 51038009  T
Q  868 cgatttggcgtttctactgtcattgtttgtctatttcaatttcgcgttttgatttgattctttctgatttttgtttcacatatctttgtttctgcaaaat 967  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51038010 cgatttggcgtttctactgtcattgtttgtctatttcgatttctcgttttgatttgattctttctgatttttgtttcacatatctttgtttctgcaaaat 51038109  T
Q  968 cgattttcttcatctcctacattgtcatattcactt 1003  Q
    ||||||||||||||||||||| | ||||||||||||    
T  51038110 cgattttcttcatctcctacact-tcatattcactt 51038144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 381 - 556
Target Start/End: Original strand, 51037536 - 51037709
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  51037536 ggctaaagtgcacttttctccc-ttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagcccc-ctaagaattagcccct 51037633  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51037634 ttgcagtagtggtcctttttaacaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattaaccatt 51037709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 51038899 - 51038717
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | |||  |||||||    
T  51038899 aaaatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtccct-taagaat 51038801  T
Q  473 tagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  51038800 tgtcccctttgcaatagtggtcctttttagcaattttgaccgagtcaacgctgatttggcatgccacgtgtgtaattaaccatt 51038717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 380 - 550
Target Start/End: Complemental strand, 54540892 - 54540724
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||| | |||||||||| ||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaatttt-ggccccctaagatttagcccc 54540794  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||   || || |||||  |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  54540793 tttgcaactttgatcctttttgtcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 54540724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 371 - 550
Target Start/End: Complemental strand, 22776923 - 22776746
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |||| |||| ||||||||||||||||| | ||||||||||    
T  22776923 ataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaatttt-ggccccctaaga 22776825  T
Q  471 attagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||||||||||    |||||  ||||  |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  22776824 attagcccctttgcatatttggtccattttcccaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 22776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 372 - 546
Target Start/End: Complemental strand, 47610690 - 47610517
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||||| |||| |||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| ||||||| |||||||||||||     
T  47610690 taaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt-agcccccctaagat 47610592  T
Q  472 ttagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    |||||||| ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  47610591 ttagccccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 47610517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 376 - 549
Target Start/End: Original strand, 7758397 - 7758569
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||| | |||||||||| |||     
T  7758397 atttaggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttg-ccccctaagatttaa 7758495  T
Q  476 cccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatt 549  Q
    |||||||| |    ||||| ||||   ||||||||||| ||||||| || |  ||||||||||||||| |||||    
T  7758496 cccctttgtatctttggtccttttggtcaattttgacctagtcaacgcttaagtggcatgccacgtgtataatt 7758569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 377 - 546
Target Start/End: Original strand, 47609693 - 47609861
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||| || | || ||||| |||| |||| ||||||||||| |||||    
T  47609693 tttaggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttaacccccctaagatttagc 47609791  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||| ||||||   ||||| |||| | ||||||||||| ||||||| |  |||||||||||||| ||||||    
T  47609792 cccattgcaactttggtccttttgaccaattttgaccaagtcaacgccaatttggcatgccacatgtgta 47609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 652 - 812
Target Start/End: Original strand, 52104759 - 52104928
Alignment:
Q  652 ttaatctccttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaaat---------attacatgaatcttttcaaca 742  Q
    |||||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||||         |  |||||||| |||||||||    
T  52104759 ttaatctcattcatcttctccttcattttcttaacaacttcatcttcttctcaaccaaaacccagaaaattcagaaaatacaacatgaatattttcaaca 52104858  T
Q  743 acaacaacaatcttcatnnnnnnntccagaaaatcatctcagaaacccaaattagggacttaacccaaaa 812  Q
    |||||||||||||||||       |||||||||||||||||  ||||||||||||||| |||||||||||    
T  52104859 acaacaacaatcttcataaaaaaatccagaaaatcatctcaataacccaaattagggatttaacccaaaa 52104928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 381 - 546
Target Start/End: Original strand, 51469972 - 51470136
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||||||| || ||| ||||||||| ||||||||||| |||| || | || ||||| ||||||| | ||||||||||| ||||||||     
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaa-cccccctaagatttagcccca 51470070  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  51470071 ttgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtgta 51470136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 380 - 530
Target Start/End: Complemental strand, 46721322 - 46721173
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||| |||| ||||||| |||||||||| ||||| ||||| |||| |||||||||||||||||||  ||||||||| ||||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttag-tcccctaagatttagcccc 46721224  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttg 530  Q
    ||||||    ||||| || |   ||||||||||| ||||||| ||||||||    
T  46721223 tttgcatatttggtccttctggtcaattttgaccaagtcaacgctgatttg 46721173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 378 - 539
Target Start/End: Complemental strand, 51470558 - 51470399
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||||| || ||| || | || ||||| ||||||| ||| ||||||||| |||||     
T  51470558 ttaggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt-agcacccctaagatttagct 51470461  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccac 539  Q
    || ||||||   ||||| |||| | ||||||||||| ||||||| |||||||||||||||||    
T  51470460 ccattgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccac 51470399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 534491 - 534673
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    |||| |||||||||||||||||||| ||||  ||||| ||||||| |||||||||||||| | |||| ||||||||||||||||| | |||||||||| |    
T  534491 aaaaattaggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaatttt-ggccccctaagatt 534589  T
Q  473 tagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||  ||||||    |||||  |||   ||||||||||  |||  || ||||||||||||||||| |||||||||| |||||    
T  534590 tagcctatttgcatctttggtccatttggccaattttgactaagtgtacgctgatttggcatgccacatgtgtaattaaccatt 534673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 375 - 521
Target Start/End: Complemental strand, 29932805 - 29932661
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    |||| |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| | |||| ||||| |||    
T  29932805 aattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaatttt-gaccccttaagattta 29932708  T
Q  475 gcccctttgcaatagtggtcatttttagcaattttgaccgagtcaac 521  Q
    | |||||||||||| | ||| ||||   ||||||||||| |||||||    
T  29932707 gtccctttgcaataatagtccttttggccaattttgacctagtcaac 29932661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 375 - 521
Target Start/End: Complemental strand, 29981959 - 29981815
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    |||| |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| | |||| ||||| |||    
T  29981959 aattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaatttt-gaccccttaagattta 29981862  T
Q  475 gcccctttgcaatagtggtcatttttagcaattttgaccgagtcaac 521  Q
    | |||||||||||| | ||| ||||   ||||||||||| |||||||    
T  29981861 gtccctttgcaataatagtccttttggccaattttgacctagtcaac 29981815  T

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Target: chr3; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 379 - 547
Target Start/End: Original strand, 29931224 - 29931391
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||||||  |||| ||   ||||||||||||||||| | |||||||||| ||| |||    
T  29931224 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaatttt-ggccccctaagatttaaccc 29931322  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    |||||||||| | ||| ||||   ||||||||||  ||||||| |   | |||||| ||||||||||||    
T  29931323 ctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtgtaa 29931391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 379 - 547
Target Start/End: Original strand, 29980378 - 29980545
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||||||  |||| ||   ||||||||||||||||| | |||||||||| ||| |||    
T  29980378 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaatttt-ggccccctaagatttaaccc 29980476  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    |||||||||| | ||| ||||   ||||||||||  ||||||| |   | |||||| ||||||||||||    
T  29980477 ctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtgtaa 29980545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 380 - 511
Target Start/End: Complemental strand, 55192096 - 55191967
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||||||| |||  || | ||||||||||||||||| ||||| | |||||||| ||||    
T  55192096 aggctaaagtgta-ttttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctc-aagaattaacccc 55191999  T
Q  480 tttgcaatagtggtcatttttagcaattttga 511  Q
    ||||||||  || ||||||||  |||||||||    
T  55191998 tttgcaattttgatcatttttgtcaattttga 55191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 19984847 - 19984925
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  19984847 taggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 19984925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 46719941 - 46720044
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| |||| |||| | |||||||||||||||||  || |||||| ||||||| |    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttag-tcctctaagatttagcccat 46720039  T
Q  481 ttgca 485  Q
    |||||    
T  46720040 ttgca 46720044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 47615655 - 47615596
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  47615655 aatttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 47615596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatt 455  Q
    ||||||||||||||||||| | | ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 54539754 - 54539859
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||   ||||||||||||||||| |  ||||||||| ||||| |     
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaatttt-gatcccctaagatttagctca 54539852  T
Q  480 tttgcaa 486  Q
    |||||||    
T  54539853 tttgcaa 54539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 377 - 486
Target Start/End: Original strand, 7267640 - 7267747
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||| || | ||| ||||||||||||| | |||||||||| |||||    
T  7267640 tttaggttaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaatttt-ggccccctaagatttagc 7267737  T
Q  477 ccctttgcaa 486  Q
    | | ||||||    
T  7267738 ctcattgcaa 7267747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 23770505 - 23770405
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||| ||||| |||||||| ||| |||||||| ||||||||  ||| |||| |||||||||||||||||||| ||||||||| ||| ||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagc-cccctaagatttaacccctttg 23770407  T
Q  484 ca 485  Q
    ||    
T  23770406 ca 23770405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 371 - 488
Target Start/End: Complemental strand, 53616127 - 53616011
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| |||| | |||||||||||||||| ||||||||||| ||| | ||| |||||| |  || |||| |||||||||||||||| |||||||| ||||    
T  53616127 ataaattttaagataaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaatttcagcccccc-aaga 53616029  T
Q  471 attagcccctttgcaata 488  Q
    |||||| |||||||||||    
T  53616028 attagctcctttgcaata 53616011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 8875902 - 8876001
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||||||||| |||||||| ||  |||||| |||||||||  |||| |||| ||||||||||||||||| | |||||||||| |||||    
T  8875902 tttaggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaatttt-ggccccctaagatttagc 8876000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 371 - 489
Target Start/End: Original strand, 53614809 - 53614925
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||| || |||||||   ||  |||  | ||||||||||||||| ||||||  ||||    
T  53614809 ataaattttaggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc--aaga 53614906  T
Q  471 attagcccctttgcaatag 489  Q
    |||||||| ||||||||||    
T  53614907 attagcccatttgcaatag 53614925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 379 - 550
Target Start/End: Complemental strand, 19986175 - 19986004
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccc--catatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||  | |||| | ||||||||||||||| | ||| |||||| ||| |    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaatttt-gaccctctaagatttaac 19986077  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||||    |||||||||    ||||||||||| ||||||  |  |  ||||||||||||||||||||||    
T  19986076 ccctttgcatctttggtcatttcggtcaattttgacc-agtcaatgcctacgtggcatgccacgtgtgtaatta 19986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 12700171 - 12700249
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||||| |||||  ||||||||||||| ||||||||||| |||| || | |||||||||||||||||    
T  12700171 tttaggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 12700249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 373 - 457
Target Start/End: Original strand, 23769849 - 23769933
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||| | ||  ||||  ||||||||||||||||    
T  23769849 aaaatgtaggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaatttt 23769933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 377 - 484
Target Start/End: Complemental strand, 5029787 - 5029682
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||||||| || |||||||||  ||||||||||| || | || | || ||||| ||||||||  |||||||||||||||||    
T  5029787 tttaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt-tcccccctaagaattagc 5029690  T
Q  477 ccctttgc 484  Q
    ||| ||||    
T  5029689 cccattgc 5029682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 379 - 550
Target Start/End: Original strand, 51347266 - 51347436
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||| |||| ||||| ||| |||||||||||||||||  ||  ||||||||||||  |||||||| | |||||||||| ||| |||    
T  51347266 taggttaaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaatttt-gaccccctaagatttaaccc 51347364  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
     |||||||   || ||||||| | |||| |||||| ||||||| |  |  ||||| || |||||||||||||    
T  51347365 gtttgcaactttgatcattttgatcaatgttgacctagtcaacgcatacgtggcaggctacgtgtgtaatta 51347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 371 - 485
Target Start/End: Complemental strand, 12703610 - 12703498
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    |||||||  |||||||||||||||||| ||| || |||||||||||| ||| ||||||| |||| || | ||||||||||||||||| | ||||||| ||    
T  12703610 ataaaataaaggctaaagtgcactttttccctct-aactttcaaaaatttgtaattttggccccctaagtacaaaaactacaatttt-ggccccctatga 12703513  T
Q  471 attagcccctttgca 485  Q
     |||||||| |||||    
T  12703512 tttagccccattgca 12703498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 40426877 - 40426796
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgc-aattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| | |||| |||  ||||||| ||||||||| ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccc 40426796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 47614185 - 47614288
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||||| |||| || | |  ||||| |||||||| | |||||||||| |||||| ||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt-ggccccctaagatttagcctct 47614283  T
Q  481 ttgca 485  Q
    |||||    
T  47614284 ttgca 47614288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 53901487 - 53901406
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||||||| || || | |||||||||||||| || ||||||    
T  53901487 ggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccc 53901406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 379 - 550
Target Start/End: Complemental strand, 7268929 - 7268761
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||| || | || | | | ||||||||||||| | || ||||||| |||| ||    
T  7268929 taggttaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaatttt-ggcctcctaagatttagtcc 7268832  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    | |||||||  |  || |||| | |||||||||||| |||||  || |  ||||| ||||||||||||||||    
T  7268831 cattgcaattttaatccttttgatcaattttgaccg-gtcaatgcttacgtggcacgccacgtgtgtaatta 7268761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 377 - 500
Target Start/End: Complemental strand, 39844302 - 39844178
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatg--aacaaaaactacaattttagcccccctaagaatta 474  Q
    |||||| |||||||||| ||| ||||||||| ||| |||||||||||||||| ||||| ||||  || |||||  |||| ||| | ||| |||  |||||    
T  39844302 tttaggttaaagtgcaccttttcccccttaagttttaaaaagttgcaattttaaccccttatgtaaaaaaaaatgacaaattt-ggccctctataaatta 39844204  T
Q  475 gcccctttgcaatagtggtcattttt 500  Q
    |||||||||||||||| ||| |||||    
T  39844203 gcccctttgcaatagtagtctttttt 39844178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 378 - 464
Target Start/End: Complemental strand, 52281651 - 52281565
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||||||| || ||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  52281651 ttaggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 52281565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 382 - 547
Target Start/End: Original strand, 8456479 - 8456642
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctt 481  Q
    |||||||||||||||| |||||| || ||||||||| |||||||||||  ||| ||   ||||||||||||||||| | |||||||||| |||||| | |    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaatttt-ggccccctaagatttagcctcat 8456576  T
Q  482 tgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    |||||   || || ||||   ||||||||||| ||||||| |     |||||||||||||||||||    
T  8456577 tgcaaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggcatgccacgtgtgtaa 8456642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 28262191 - 28262275
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  28262191 taggctaaagtgcacttttcccccc-taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 28262275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 28263214 - 28263129
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  28263214 taggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 28263129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 34019227 - 34019170
Alignment:
Q  400 ccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||| |||||||||||||||| || | ||||| |||||||||||    
T  34019227 ccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaatttt 34019170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 52276302 - 52276387
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||||| || ||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  52276302 taggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccccc 52276387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 24516459 - 24516562
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||| ||||||||||||| ||||| ||||||| ||||| ||||||||||| | || || | | ||||||||||||||| | |||| ||||| ||||| ||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaatttt-ggccccttaagatttagctcc 24516557  T
Q  480 tttgc 484  Q
    |||||    
T  24516558 tttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 18456171 - 18456081
Alignment:
Q  375 aatttaggctaaagtgcacttttcc-ccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||| ||||||||||||||||||| |||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  18456171 aattttggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 18456081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 22775783 - 22775828
Alignment:
Q  388 gtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  22775783 gtgcacttttcccccct-aactttcaaaaagttgcaattttggcccc 22775828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 52839036 - 52839141
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| |||||||||  |||||| |||||| ||| |||||||||||  || | || ||||| ||||||||| |||| |||| | ||||||||    
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaatttta-cccctctaaaatttagcccc 52839134  T
Q  480 tttgcaa 486  Q
     ||||||    
T  52839135 attgcaa 52839141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 5001198 - 5001275
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattt 456  Q
    ||||||||||||||||||||| ||| || |||||||||  ||||||||||| |||| || | || ||||| |||||||    
T  5001198 taggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 18442629 - 18442714
Alignment:
Q  380 aggctaaagtgcacttttcccccct-taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||| |||||| ||||  ||| |  |||||||||||||| ||||||    
T  18442629 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccc 18442714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 19487703 - 19487788
Alignment:
Q  380 aggctaaagtgcacttttcccccct-taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||| |||||| ||||  ||| |  |||||||||||||| ||||||    
T  19487703 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccc 19487788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 486
Target Start/End: Complemental strand, 52840705 - 52840601
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||| ||||||| ||| ||||||||||||| ||||||||||| | || ||   |  ||||| |||||||| | |||||||||| ||||||||     
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaatttt-gtccccctaagatttagcccca 52840607  T
Q  481 ttgcaa 486  Q
    ||||||    
T  52840606 ttgcaa 52840601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 535883 - 535835
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    |||||||||| |||||||| ||| ||||||||||||| |||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttg 535835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 390 - 458
Target Start/End: Original strand, 6170281 - 6170349
Alignment:
Q  390 gcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttta 458  Q
    |||||||| | ||| ||||||||||||| |||||||||||| ||| || | ||||||| ||||||||||    
T  6170281 gcactttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttta 6170349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 381 - 429
Target Start/End: Original strand, 25336358 - 25336406
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||||| |||||||||| |||||||| |||||||| ||||||||||||    
T  25336358 ggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttg 25336406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 39843054 - 39843098
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaatttt 428  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  39843054 taaagtgcactttttcccccttaagtttgaaaaagttgcaatttt 39843098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 8338940 - 8339023
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||| |||| ||  |||||||| ||||| ||||||||||| ||| || |||||   ||||||| ||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggccccc 8339023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 711
Target Start/End: Original strand, 11670704 - 11670755
Alignment:
Q  660 cttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaa 711  Q
    |||||||||||| |||||||||| |||| ||| || ||||||||||||||||    
T  11670704 cttcatcttctcattcattttctcaacaacttcatcttcttctcaaccaaaa 11670755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 11671444 - 11671395
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaatttt 428  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||||    
T  11671444 ttaggctaaagtgcactttttccgcct-aactttcaaaaacttgcaatttt 11671395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 26722612 - 26722699
Alignment:
Q  462 cccctaagaattagcccctttgcaatagtggtcatttttag-caattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||| || ||||||||||||||||||||  |  |||||| ||||||||||| ||||||| |  |  ||||||||||||||||||||||    
T  26722612 cccctatgatttagcccctttgcaatagtgacc--ttttagccaattttgacctagtcaacgcctaagtggcatgccacgtgtgtaatta 26722699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 26723882 - 26723795
Alignment:
Q  462 cccctaagaattagcccctttgcaatagtggtcatttttag-caattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||| || ||||||||||||||||||||  |  |||||| ||||||||||| ||||||| || |  ||||||||||| ||||||||||    
T  26723882 cccctatgatttagcccctttgcaatagtgacc--ttttagtcaattttgacctagtcaacgcttaagtggcatgccacatgtgtaatta 26723795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 31039295 - 31039253
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttg 421  Q
    |||||||||||||||||||| |||||||| ||| |||||||||    
T  31039295 taggctaaagtgcacttttcaccccttaagttttaaaaagttg 31039253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 54987103 - 54987005
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||   ||| |||| | |||||||| |||||| | ||| |||||| ||||| ||||||    
T  54987103 taaagtgcacttttccccc--taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataatttt-gaccctctaagatttagctcctttg 54987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 6249633 - 6249686
Alignment:
Q  405 taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttta 458  Q
    ||||||||||||| |||||||||| | ||| || | ||||||||||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttta 6249686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 110; Significance: 7e-55; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 383 - 556
Target Start/End: Original strand, 18730 - 18902
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccccttt 482  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||| | |||||||||||||||||||||| | || ||||||||||| |||||||    
T  18730 ctaaagtgcactttttccctcttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaatttt-gacctcctaagaattaaccccttt 18828  T
Q  483 gcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
     ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  18829 acaatagtggtcctttttagcaattttggccgagtcaacgctgatttggcatgccacgtgtgtaattaaccatt 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 394 - 556
Target Start/End: Complemental strand, 19498 - 19337
Alignment:
Q  394 ttttccccccttaactttcaaaaagttgcaa-ttttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtgg 492  Q
    ||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||| || |||||||| ||| | |||||||||||| |||||||||||||    
T  19498 ttttctccccttaactttcaaaaagttgcaaattttgatcccctatgaacaaaaattataattttagtccctc-aagaattagcccttttgcaatagtgg 19400  T
Q  493 tcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    || |||| |||||||||||| |||||||| ||||||| ||||||||||||| |||||| |||||    
T  19399 tcctttt-agcaattttgactgagtcaacgctgatttagcatgccacgtgtataattaaccatt 19337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 378 - 546
Target Start/End: Complemental strand, 3227698 - 3227531
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| || | || ||||| |||| |||||| ||||||||| ||||||    
T  3227698 ttaggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcacccctaagatttagcc 3227600  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    || ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  3227599 ccattgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtgta 3227531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 376 - 546
Target Start/End: Original strand, 31949317 - 31949486
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    ||||||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||| || | || ||||| ||||||| ||||||||||||| ||||    
T  31949317 atttaggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt-agcccccctaagatttag 31949415  T
Q  476 cccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    |||| ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  31949416 ccccattgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtgta 31949486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 383 - 546
Target Start/End: Original strand, 17781663 - 17781825
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccccttt 482  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| || | || ||||| |||| |||| ||||||||||| |||||||| ||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttaacccccctaagatttagccccatt 17781761  T
Q  483 gcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||   ||||| |||| | ||||||||||| ||||||| | ||||||||||||||| ||||||    
T  17781762 gcaactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtgta 17781825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 369 - 550
Target Start/End: Original strand, 11658367 - 11658547
Alignment:
Q  369 ttataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaa 468  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||  |||||||||  |||| |||| ||||||||||||||||| | ||| | ||    
T  11658367 ttattaaatataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctc-aa 11658465  T
Q  469 gaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||||||||||| |||||| ||| ||| |  ||||||||||   |||||| |  || ||||| ||||||||||||||||    
T  11658466 gaattagcccctttgtaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtgtaatta 11658547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 379 - 539
Target Start/End: Complemental strand, 31949905 - 31949746
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||| ||   || ||||| ||||||| ||| ||||||||| |||||||    
T  31949905 taggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt-agcacccctaagatttagccc 31949807  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccac 539  Q
    | ||||||   ||||| |||| | ||||||||||| ||||||| |||||||||||||||||    
T  31949806 cattgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccac 31949746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 381 - 546
Target Start/End: Complemental strand, 47525468 - 47525304
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||  |||| || | |  ||||| ||||||| ||||||||||||| ||||||||     
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaattt-agcccccctaagatttagcccca 47525370  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  47525369 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 47525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 3227109 - 3227271
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctt 481  Q
    ||||||||||||||| ||||||| || ||||||||| ||||||||||| |||| || | || ||||| ||||||| ||||||| ||||| |||||||| |    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt-agcccccttaagatttagccccat 3227206  T
Q  482 tgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    |||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  3227207 tgcaactttggtccttttgaacaattttgacctagtcaacgctgatttggcatgccacatgtgta 3227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 378 - 539
Target Start/End: Original strand, 127334 - 127492
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||  ||| || | || ||||| ||||||| ||||||| ||||| ||||||    
T  127334 ttaggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaattt-agccccc-taagatttagcc 127430  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccac 539  Q
    |  ||||||   ||||| |||| | ||||||||||| ||||||| |||||||||||||||||    
T  127431 caattgcaactttggtccttttgaccaattttgacctagtcaacgctgatttggcatgccac 127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 384 - 539
Target Start/End: Complemental strand, 128699 - 128545
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||| || | || ||||| |||| |||||||||||||||| | |||||| |||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaa-tttagcccccctaagattcagccccattg 128601  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccac 539  Q
    |||   ||  | |||| | ||||||||||| ||||||  |||||||||||||||||    
T  128600 caactttgacccttttaaccaattttgacctagtcaatgctgatttggcatgccac 128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 11662649 - 11662523
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||  | |  |||| |||||||||| |||||| ||||||| |||||||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggcccccc-aagaattagcccctttg 11662551  T
Q  484 caatagtggtcatttttagcaattttga 511  Q
    ||||||| ||| ||| |  |||||||||    
T  11662550 caatagtagtcctttatgtcaattttga 11662523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 377 - 556
Target Start/End: Complemental strand, 30439462 - 30439285
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | |||||||   | ||||  |||||||||||||||||| |||| ||||| |||||    
T  30439462 tttaggctaaagtgcacttt-ctccccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccc-taagatttagc 30439365  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||||||     |||||||||   ||||||||||  |||||||||||| ||| |||||||  |||||||||| |||||    
T  30439364 ccctttgcaccttcggtcattttgctcaattttgacttagtcaacactgacttgacatgccatatgtgtaattaaccatt 30439285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 378 - 464
Target Start/End: Complemental strand, 22630556 - 22630470
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||   ||||||||||||||||||||||||    
T  22630556 ttaggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccc 22630470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 381 - 486
Target Start/End: Original strand, 31659622 - 31659727
Alignment:
Q  381 ggctaaagtgcactttt-ccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||| |||||| ||||||||||||| || ||||||||||||| || | ||||||||||||||||| | |||||||||| ||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaatttt-ggccccctaagatttagcccc 31659720  T
Q  480 tttgcaa 486  Q
     ||||||    
T  31659721 attgcaa 31659727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 42886389 - 42886284
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||||| || | ||||||||||||| |||||||||||||||| ||   |||||||||||||||||||| ||||||||| |||||||    
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagc-cccctaagatttagccc 42886291  T
Q  479 ctttgca 485  Q
     ||||||    
T  42886290 atttgca 42886284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 371 - 478
Target Start/End: Complemental strand, 17782665 - 17782558
Alignment:
Q  371 ataaaatt-taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaag 469  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| |||| |||||||||||||||    
T  17782665 ataaaattataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccctaag 17782567  T
Q  470 aattagccc 478  Q
    | |||||||    
T  17782566 atttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 18371424 - 18371527
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| | |||||||||| ||||| | |    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatttt-ggccccctaagatttagcacat 18371522  T
Q  481 ttgca 485  Q
    |||||    
T  18371523 ttgca 18371527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 21505414 - 21505517
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||| ||||  ||  ||||||||||||||||| | |||| ||||| |||||||    
T  21505414 taggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaatttt-gaccccataagatttagccc 21505510  T
Q  479 ctttgca 485  Q
    |||||||    
T  21505511 ctttgca 21505517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 375 - 490
Target Start/End: Complemental strand, 48935010 - 48934896
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    ||||| |||||||||||| |||||| ||| ||||||||||||| ||| |||||||||||  || | |||||||||| |||||| |  |||| ||||||||    
T  48935010 aattttggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaatttt-gatcccccaagaatta 48934912  T
Q  475 gcccctttgcaatagt 490  Q
    |||| |||||||||||    
T  48934911 gcccatttgcaatagt 48934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 7500454 - 7500557
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||  || | | | |||| |||||||| | |||||||||| ||||||||    
T  7500454 aggctaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaatttt-ggccccctaagatttagcccc 7500551  T
Q  480 tttgca 485  Q
    ||||||    
T  7500552 tttgca 7500557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 7501956 - 7501850
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | |  ||||| |||||||| | |||| |||||  |||||    
T  7501956 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt-ggccccttaagatgtagcc 7501858  T
Q  478 cctttgca 485  Q
    ||||||||    
T  7501857 cctttgca 7501850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 22629481 - 22629589
Alignment:
Q  379 taggctaaagtgcacttttccccc---cttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    |||||||||||||| |||||||||   ||||| ||||||||| ||| ||||||| || | || | ||||||||||||||||| | |||||||||| ||||    
T  22629481 taggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaatttt-ggccccctaagatttag 22629579  T
Q  476 cccctttgca 485  Q
    ||||||||||    
T  22629580 cccctttgca 22629589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 394 - 483
Target Start/End: Complemental strand, 18372544 - 18372457
Alignment:
Q  394 ttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||| || ||||||||| ||||||||||| |||| || | ||||||||||||||||| | |||||||||| ||||||||||||    
T  18372544 ttttcccccct-aattttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-ggccccctaagatttagcccctttg 18372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaa 453  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||||||||||| | || |||| |||||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 660 - 755
Target Start/End: Complemental strand, 30439181 - 30439085
Alignment:
Q  660 cttcatcttctccttcattttcttaacagctttattttcttctcaacc-aaaatccagaaaatattacatgaatcttttcaacaacaacaacaatct 755  Q
    |||||||||||| ||||||||| ||||| ||| || |||||||||||| ||||| ||  |||||  ||| ||||| |||||||||||||||||||||    
T  30439181 cttcatcttctcattcattttcataacaacttcatcttcttctcaaccaaaaattcatcaaatacaacaggaatcgtttcaacaacaacaacaatct 30439085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 31661111 - 31661027
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||| ||| |  ||||||||||||| |||||||||||||||  || | |||||||||| |||||||| ||||    
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccc 31661027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 386 - 485
Target Start/End: Complemental strand, 14999249 - 14999153
Alignment:
Q  386 aagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgca 485  Q
    ||||||||||||||||||| || ||||||||  |||||||||||||||| ||   ||||||||||||||||| | | |||||||| ||||||||||||||    
T  14999249 aagtgcacttttcccccct-aattttcaaaac-ttgcaattttgaccccctaaatacaaaaactacaatttt-ggcgccctaagatttagcccctttgca 14999153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 32253501 - 32253448
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacc 432  Q
    ||||||||||| ||||||||| ||||||| || |||||||||||||||||||||    
T  32253501 taggctaaagtacacttttccacccttaagttgcaaaaagttgcaattttgacc 32253448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 47369780 - 47369884
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||| |||||||||   ||| ||||||||||||| ||||||||||  || |||| | |||||||||| |||||| | |||| ||||| ||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataatttt-ggccccttaagatttagcccc 47369878  T
Q  480 tttgca 485  Q
    ||||||    
T  47369879 tttgca 47369884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 34174086 - 34174010
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatt 455  Q
    |||||||||||||||||||||||||| || |||||||||  ||||||||||| |||| || | || ||||| ||||||    
T  34174086 ttaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 21508506 - 21508457
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||    
T  21508506 ttaggctaaagtgcatttttcccc--ttaactttcaaaaagtttcaattttg 21508457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 27869190 - 27869249
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||| ||||||||||||||||||| |||| ||  |||||||| ||||| |||||||||||    
T  27869190 aattaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccc 27869249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 39182238 - 39182156
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    |||||||| |||||||||| |||| ||| ||| |||| ||||||||||||||||| ||| || |||||  |||||||| |||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctattaa-aaaaatgacaattttggcccc 39182156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 455
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  388 gtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatt 455  Q
    |||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 5490984 - 5490926
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||| || |||||||||| |||| ||  ||||||||||||||||||||| ||||    
T  5490984 atttaggcttaaatgcacttttcaccccctatgtttcaaaaagttgcaattttggcccc 5490926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 20636923 - 20636869
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||| |||| ||  |||||||| ||||| |||||||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccc 20636869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 48933666 - 48933743
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||| || |||||||||   |||| ||| ||||| |||||||||||| ||| ||| ||||||||||||||||||    
T  48933666 taggctaaaatgtacttttccctt-ttaaattttaaaaacttgcaattttgatcccttataaacaaaaactacaatttt 48933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 5111441 - 5111478
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaa 417  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  5111441 aggctaaagtgcacttttcaccccttaagtttcaaaaa 5111478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 9822371 - 9822330
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttg 421  Q
    ||||||||||||||||||| |||||||| ||| |||||||||    
T  9822371 aggctaaagtgcacttttcaccccttaagttttaaaaagttg 9822330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 10724296 - 10724255
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttg 421  Q
    ||||||||||||||||||| |||||||| ||| |||||||||    
T  10724296 aggctaaagtgcacttttcaccccttaagttttaaaaagttg 10724255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 42303459 - 42303402
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    |||||||||||||||| ||||||| ||  ||| ||| |||||||||||||| ||||||    
T  42303459 taaaatttaggctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttg 42303402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 80; Significance: 5e-37; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 49536 - 49370
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||| || ||||||||||||||| | |||||||||| ||||| |    
T  49536 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaatttt-gaccccctaagatttagctc 49438  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||||   ||||| ||||   ||||||||||| | ||||| |||||||||||||||| |||||||    
T  49437 ctttgcaactttggtccttttggccaattttgaccaaatcaacgctgatttggcatgccatgtgtgta 49370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 39342 - 39474
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||  ||| ||  |||| | ||| |||||  ||| || |  |||||||    
T  39342 taggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccctttattaaacaaaattgcaaatttag-tcccttatgttttagccc 39440  T
Q  479 ctttgcaatagtggtcatttttagcaattttgac 512  Q
    |||||||||||||||| ||||   ||||||||||    
T  39441 ctttgcaatagtggtctttttgtccaattttgac 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 43615 - 43560
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacc 432  Q
    |||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  43615 tttaggcttaagtgcagtttttcccccttaagtttcaaaaagttgcaattttgacc 43560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 5e-37; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 379 - 546
Target Start/End: Original strand, 27437826 - 27437992
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||| || ||||||||||||||| | |||||||||| ||||| |    
T  27437826 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaatttt-gaccccctaagatttagctc 27437924  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||||   ||||| ||||   ||||||||||| | ||||| |||||||||||||||| |||||||    
T  27437925 ctttgcaactttggtccttttggccaattttgaccaaatcaacgctgatttggcatgccatgtgtgta 27437992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 378 - 546
Target Start/End: Original strand, 8659262 - 8659429
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| ||||||| ||||||||||||| ||||||    
T  8659262 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt-agcccccctaagatttagcc 8659360  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    || ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  8659361 ccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 8659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 3721611 - 3721776
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||| || | || ||||| | || ||||| |||| ||||| ||||||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataa-tttagaccccttaagatttagcccc 3721709  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  3721710 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 3721776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 8660305 - 8660141
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||| || | || ||||| |||| |||||||||||||||| ||||| ||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaa-tttagcccccctaagatttagctcc 8660208  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   || || |||| | ||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  8660207 attgcaactttgatccttttgaccaattttgaccaagtcaacgctgatttcgcatgccacatgtgta 8660141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 379 - 539
Target Start/End: Complemental strand, 34834682 - 34834523
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||||||| || ||||||||||||| |||||||||||| | | || | |  ||||| |||| |||||||||||||||| |||||||    
T  34834682 taggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaa-tttagcccccctaagatttagccc 34834584  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccac 539  Q
    | ||||||   ||||| |||| | ||||||||||| ||||||| |||||||||||||||||    
T  34834583 cattgcaactttggtccttttgaccaattttgacctagtcaacgctgatttggcatgccac 34834523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 16704603 - 16704522
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || | |||||||||||||||||    
T  16704603 atttaggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 16704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 375 - 486
Target Start/End: Original strand, 8821867 - 8821977
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | || ||||| |||| |||||||||||||||| |||    
T  8821867 aatttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccctaagattta 8821965  T
Q  475 gcccctttgcaa 486  Q
    || || ||||||    
T  8821966 gctccattgcaa 8821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 377 - 459
Target Start/End: Complemental strand, 6842388 - 6842306
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttag 459  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  6842388 tttaggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttag 6842306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 381 - 478
Target Start/End: Complemental strand, 8822894 - 8822798
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||||| | |||||||||||||| |||||||||||||||| || | || ||||| |||| |||||||||||||||| |||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttagcccccctaagatttagccc 8822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 379 - 486
Target Start/End: Original strand, 10784590 - 10784697
Alignment:
Q  379 taggctaaagtgcacttttccc-cccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||| || | | ||||||||||||||| | ||||| |||| ||||||    
T  10784590 taggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaatttt-ggcccccaaagatttagcc 10784688  T
Q  478 cctttgcaa 486  Q
    |||||||||    
T  10784689 cctttgcaa 10784697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 1829701 - 1829572
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||  |||| ||||||| ||||| |||||||||||||||| || | | ||||||||||||||| | |||||||||| ||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaatttt-ggccccctaagatttagcccctttg 1829603  T
Q  484 caatagtggtcatttttagcaattttgaccg 514  Q
    ||    ||||||||||   ||||||||||||    
T  1829602 catctttggtcattttggtcaattttgaccg 1829572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 371 - 488
Target Start/End: Complemental strand, 30495807 - 30495692
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| ||| ||||||||||||||||| ||||  |||||||||||||||||| ||||| | ||| |||| |||||||  |||||||| ||||| ||||||    
T  30495807 ataaatttttggctaaagtgcactttttcccc--taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaaga 30495710  T
Q  471 attagcccctttgcaata 488  Q
     ||||||| |||||||||    
T  30495709 tttagcccatttgcaata 30495692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 27322170 - 27322067
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||| || |||||||||  ||||||||||| |||| || | || ||||| ||||||||  |||||||||||||||||||    
T  27322170 taggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-ccccccctaagaattagccc 27322073  T
Q  479 ctttgc 484  Q
    ||||||    
T  27322072 ctttgc 27322067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 386 - 487
Target Start/End: Original strand, 29473082 - 29473182
Alignment:
Q  386 aagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgca 485  Q
    |||||||||||||||||||||| ||| |||||||||||||||||   || ||||||||||||  |||||||| |||| || ||||||| |||||||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctcc-aagaattggcccctttgca 29473180  T
Q  486 at 487  Q
    ||    
T  29473181 at 29473182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 379 - 434
Target Start/End: Complemental strand, 7316397 - 7316342
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7316397 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 7316342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 377 - 464
Target Start/End: Original strand, 14822356 - 14822443
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||| |||||||||||| |||||||| ||||||||| ||||||||||| ||||||| | | | ||||||||||||| ||||||    
T  14822356 tttaggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccc 14822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 7314880 - 7315047
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | |  ||||| |||||||| | |||||||||| |||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtatcaaaacaacaatttt-gaccccctaagatttagcccct 7314977  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||    ||||||||||   ||||||||||  | ||||| |  |  ||||| ||||||||||||||||    
T  7314978 ttgcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaatta 7315047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 3722612 - 3722556
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccc 433  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  3722612 tttaggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccc 3722556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 380 - 486
Target Start/End: Complemental strand, 3333128 - 3333023
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||| |||||||||||||   ||| ||| |||||||||| |||||| |||| |||| ||||||||||||||||||  ||| |||| | ||||||||    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttta-accctctaaaatttagcccc 3333030  T
Q  480 tttgcaa 486  Q
    |||||||    
T  3333029 tttgcaa 3333023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 394 - 512
Target Start/End: Complemental strand, 10786000 - 10785884
Alignment:
Q  394 ttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggt 493  Q
    ||||||||||| |||||| ||||| |||||||||| ||||| || | ||||||||||||||||||  |||| ||||| |||||||||||||||   || |    
T  10786000 ttttcccccct-aacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaatttta-accccttaagatttagcccctttgcaactttgat 10785903  T
Q  494 catttttagcaattttgac 512  Q
    | |||||| ||||||||||    
T  10785902 cctttttaccaattttgac 10785884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 16415637 - 16415575
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatga 440  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||| |||||    
T  16415637 ttaggctaaagtgcacttttcaccccttaaattttaaaaagttgcgattttgaccccttatga 16415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 379 - 512
Target Start/End: Complemental strand, 27448016 - 27447884
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||  ||| ||  |||| | ||| |||||  ||| || |  |||||||    
T  27448016 taggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccctttattaaacaaaattgcaaatttag-tcccttatgttttagccc 27447918  T
Q  479 ctttgcaatagtggtcatttttagcaattttgac 512  Q
    |||||||||||||||| ||||   ||||||||||    
T  27447917 ctttgcaatagtggtctttttgtccaattttgac 27447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 16703570 - 16703650
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||  || |||||||||| |||||||||||| || |||   ||||||||||||||||||||||||    
T  16703570 ggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatcc-ataaatacaaaaactacaattttagccccc 16703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 17496789 - 17496901
Alignment:
Q  377 tttaggctaaagtgcacttttccccc----cttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    |||||||||||||||| |||||||||    | ||||||||||||| || ||||||| ||||  || | ||||||||| ||||||| |||||||||||| |    
T  17496789 tttaggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatt 17496888  T
Q  473 tagcccctttgca 485  Q
    || || |||||||    
T  17496889 taacctctttgca 17496901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 383 - 434
Target Start/End: Complemental strand, 26717183 - 26717132
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgacccc 26717132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 27443746 - 27443801
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacc 432  Q
    |||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  27443746 tttaggcttaagtgcagtttttcccccttaagtttcaaaaagttgcaattttgacc 27443801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 26575131 - 26575051
Alignment:
Q  405 taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaa 486  Q
    ||||||||||||| |||||||||| ||||| || | ||||||||||||||||| | |||||||||| ||| | |||||||||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaatttt-ggccccctaagatttaactcctttgcaa 26575051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 457
Target Start/End: Original strand, 6840183 - 6840268
Alignment:
Q  370 tataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||| ||||||| |||||||||||  ||||||||| |||||||||||||| |||||| |||| ||   |||||||||| ||||||    
T  6840183 tataaaaattaggctgaagtgcacttt--cccccttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataatttt 6840268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 20973401 - 20973294
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| ||||| || || ||||||  ||||  |||| ||| | ||||||| ||||||||||     
T  20973401 aggctaaagtgcacttttccccctttaagtttcaataagttgcgattttaacaccctatgaaataaaatgacaaattt-gaccccctatgaattagccca 20973303  T
Q  480 tttgcaata 488  Q
    ||| |||||    
T  20973302 tttacaata 20973294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 26239945 - 26239997
Alignment:
Q  369 ttataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttg 421  Q
    |||||||||||||||||||| ||||||||| |||||||| ||| |||||||||    
T  26239945 ttataaaatttaggctaaagagcacttttcaccccttaagttttaaaaagttg 26239997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 26574615 - 26574751
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||| ||| || ||  ||||||||||||| |||||||||||| ||  || | ||||||||||||  ||| |  ||| ||||| |||||    
T  26574615 tttaggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca--ttttgatcccttaagatttagc 26574712  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccga 515  Q
    ||||||||||   || || |||||  |||||||||||||    
T  26574713 ccctttgcaactttgatcttttttgtcaattttgaccga 26574751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 14823679 - 14823593
Alignment:
Q  379 taggctaaagtgcacttttc-cccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||  ||||||||| ||| ||||| ||||||||||  |||| || | ||| ||||||||||||| ||||||    
T  14823679 taggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccc 14823593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 27318313 - 27318418
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattt-tagcccccctaagaattagcc 477  Q
    ||||||||||||||| ||| ||||| || |||||||||  ||||||||||| |||| || | || ||||| |||||||    ||||||||||||||||||    
T  27318313 taggctaaagtgcaccttttccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcc 27318411  T
Q  478 cctttgc 484  Q
    |||||||    
T  27318412 cctttgc 27318418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 406 - 483
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  406 aactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||| | ||| |||||||||||||||| |||| | |||||||||||||||| ||||| ||||| ||||||||||||    
T  12350823 aactttaataaacttgcaattttgacccc-tatgtataaaaactacaattttaaccccc-taagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 3722516 - 3722460
Alignment:
Q  490 tggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  3722516 tggtccttttgaccaattttgaccaagtcaacgctgatttggcatgccacatgtgta 3722460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 22968460 - 22968404
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||    
T  22968460 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc 22968404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 23819933 - 23819989
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||| |||||| ||||    
T  23819933 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc 23819989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 406 - 546
Target Start/End: Original strand, 34830927 - 34831066
Alignment:
Q  406 aactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcatttttagcaa 505  Q
    |||||||||||| |||||  |||| |||| || | || ||||| ||||||| ||||||||||||| |||||| | ||||||   |||||  ||| | |||    
T  34830927 aactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaattt-agcccccctaagatttagccacattgcaactttggtccctttgaccaa 34831025  T
Q  506 ttttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    |||||||| ||||||  || ||||||| |||||| ||||||    
T  34831026 ttttgacctagtcaatgctaatttggcctgccacatgtgta 34831066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 13345549 - 13345603
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccc 433  Q
    |||||||||||| ||||||| ||||||||| |||| ||||||||| ||||||||||    
T  13345549 ttaggctaaagttcactttt-cccccttaagtttccaaaagttgcgattttgaccc 13345603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 486
Target Start/End: Original strand, 5658759 - 5658860
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||| |||||||||||||| ||| ||||||||  ||||||    || |||| ||||||||||||||||| |  ||| ||||| ||||||| ||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaatttt-gatcccttaagatttagcccatttg 5658857  T
Q  484 caa 486  Q
    |||    
T  5658858 caa 5658860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 32452034 - 32451948
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    ||||||||||| |||||||||   ||| ||  |||||||| ||||||||||||||||| ||| || |||||  |||||||| |||||    
T  32452034 tttaggctaaactgcactttttgtcccctatgtttcaaaatgttgcaattttgaccccctattaaaaaaaaaaacaattttggcccc 32451948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 372 - 514
Target Start/End: Original strand, 36449769 - 36449910
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||||||| |||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gcccccccaagaa 36449867  T
Q  472 ttagcccctttgcaatagtggtcatttttagcaattttgaccg 514  Q
    |||| |||||||||||  || || |||| | ||||||||||||    
T  36449868 ttaggccctttgcaattttgatccttttgaccaattttgaccg 36449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 379 - 487
Target Start/End: Complemental strand, 38840596 - 38840489
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| || | |||||||||||||||||||| ||||||||| |||||||    
T  38840596 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagc-cccctaagatttagccc 38840498  T
Q  479 ctttgcaat 487  Q
    | |||||||    
T  38840497 cattgcaat 38840489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 379 - 556
Target Start/End: Original strand, 18797244 - 18797421
Alignment:
Q  379 taggctaaagtgcacttttcc-ccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| || | |  |||||||||||||| | |||||||| | ||||||    
T  18797244 taggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaatttt-gaccccctaaaatttagcc 18797342  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||||||||    ||||| ||||   ||||||||||   |||||| || ||||||||||||||||||||||||| |||||    
T  18797343 cctttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaattaaccatt 18797421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 381 - 546
Target Start/End: Complemental strand, 1034570 - 1034407
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| |||| || | || ||||| ||||||| ||||||||||||| ||||||  |    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaattt-agcccccctaagatttagccaat 1034472  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    | ||||   ||||| |||| | || |||||||| ||||||| ||||||||||||||||| ||||||    
T  1034471 t-gcaactttggtccttttgaccacttttgacctagtcaactctgatttggcatgccacatgtgta 1034407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 377 - 479
Target Start/End: Complemental strand, 7899987 - 7899886
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| || | ||| |||||||||||||||| ||||||||| |||||    
T  7899987 tttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagc-cccctaagatttagc 7899889  T
Q  477 ccc 479  Q
    |||    
T  7899888 ccc 7899886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 18904358 - 18904467
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || | ||||||||||||||||| |   |||||||||    
T  18904358 taaaaattaggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaatttt-ggttccctaagaa 18904456  T
Q  472 ttagccccttt 482  Q
    |||||||||||    
T  18904457 ttagccccttt 18904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 372 - 485
Target Start/End: Complemental strand, 23869644 - 23869533
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||| ||   ||||||||||||||||||| | ||||||||     
T  23869644 taaaaattaggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttag-ctccctaagat 23869547  T
Q  472 ttagcccctttgca 485  Q
    ||||||||||||||    
T  23869546 ttagcccctttgca 23869533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 377 - 548
Target Start/End: Complemental strand, 11938893 - 11938725
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||  | | || | ||||||| || |||||| ||||||||||||||||||    
T  11938893 tttaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataatttt-gcccccctaagaattagc 11938796  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaat 548  Q
     | ||||||||  || ||||||||  ||||||||||  |||||| |||||  |||||||| ||| |||||||    
T  11938795 tcttttgcaattttgatcatttttgccaattttgactcagtcaatactga-gtggcatgcgacgcgtgtaat 11938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 377 - 550
Target Start/End: Complemental strand, 1093250 - 1093080
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||| | |||||||||||||||||| |||| ||||||||| |||  || |||  ||||||| ||||||||||  ||| |||||| |||||    
T  1093250 tttaggctaaagtgta-ttttccccccttaacttttaaaatgttgcaattgtgattccctatatacaaaaattacaatttta-acccgctaagatttagc 1093153  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||||||||||| ||  |||| ||||||||||| |||||||| |  || ||||||||| |||  |||||||    
T  1093152 ccctttgcaatagtgatc-cttttggcaattttgactgagtcaacccctatgtggcatgccgcgtaggtaatta 1093080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 22588055 - 22587952
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| |||||||| | ||||||||||||| ||||||||||| |||| |||| ||||||||||||||||| | |||| ||||| ||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaatttt-ggccccttaagatttagcccc 22587958  T
Q  480 tttgca 485  Q
    ||||||    
T  22587957 tttgca 22587952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 371 - 547
Target Start/End: Complemental strand, 26545632 - 26545457
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| |||| |||||||||||||||| ||  | | ||||||||||| |||||||||||||||| ||   ||||||| || |||||| | ||| ||||||    
T  26545632 ataaattttaagctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataatttt-gaccctctaaga 26545534  T
Q  471 attagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
     ||||||||||||||    |||||||||| | ||||||||||| | ||||| |  || |||||||||||||||||||    
T  26545533 tttagcccctttgcatctttggtcattttgatcaattttgaccaaatcaacgcatatgtggcatgccacgtgtgtaa 26545457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 379 - 550
Target Start/End: Original strand, 7898689 - 7898858
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||  || | || | | | ||||||||||||| | |||||||||| |||||||    
T  7898689 taggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaatttt-ggccccctaagatttagccc 7898787  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    | |||||||  |  || |||| | ||||||||||| ||||||  || |  ||||||||||||||||||||||    
T  7898788 cattgcaattttaatccttttgatcaattttgacc-agtcaatgcttacgtggcatgccacgtgtgtaatta 7898858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 556
Target Start/End: Original strand, 11996739 - 11996881
Alignment:
Q  413 aaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcatttttagcaattttgac 512  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||  | | ||||| ||| ||||||| ||    ||||| ||||   ||||||||||    
T  11996739 aaaaagttgcgattttgaccccctatgtacaaaaactacaattttagttctc-taagatttaacccctttacatctttggtccttttggtcaattttgac 11996837  T
Q  513 cgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    | ||||||| ||||||||||| |||||||||||||||| |||||    
T  11996838 caagtcaacgctgatttggcaagccacgtgtgtaattaaccatt 11996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 18906092 - 18906006
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    |||||||||||||||||||||||||   ||||||||||||| ||||||||||  |||| || | |||||||||||||||||||||||    
T  18906092 tttaggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccc 18906006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 380 - 550
Target Start/End: Original strand, 22848190 - 22848359
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||  ||| ||   ||||||||||||||||| | | |||||||| ||||||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaatttt-ggctccctaagatttagcccc 22848288  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||    ||||| |||| | ||||||||||  | ||||| |  |  ||||| ||||||||||||||||    
T  22848289 tttgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggcaagccacgtgtgtaatta 22848359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 377 - 487
Target Start/End: Complemental strand, 36451025 - 36450917
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||||  ||| || | ||| ||||||||||||  ||||||| ||||||||||    
T  36451025 tttaggttaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggcccccc-aagaattagc 36450928  T
Q  477 ccctttgcaat 487  Q
     ||||||||||    
T  36450927 tcctttgcaat 36450917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 377 - 487
Target Start/End: Original strand, 38839238 - 38839347
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||| |||| ||||||||| ||||||||| ||||||||||  |||| ||   ||||||||||||||||| | |||||||||| |||||    
T  38839238 tttaggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaatttt-ggccccctaagatttagc 38839336  T
Q  477 ccctttgcaat 487  Q
    ||| |||||||    
T  38839337 cccattgcaat 38839347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 373 - 550
Target Start/End: Complemental strand, 41879321 - 41879146
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    |||| |||||||||||| ||||||| ||||||||| ||||||||| ||||||||||| |||| || | ||| ||||||||||||||  |||||||| | |    
T  41879321 aaaaattaggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaatttta-accccctaaaatt 41879223  T
Q  473 tagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||| || |||||||  |  ||||||| | ||||||||||| ||||||  |  |  |||| |||||||||||||||||    
T  41879222 tagcaccattgcaattttaatcattttgatcaattttgacc-agtcaatgcctacgtggcgtgccacgtgtgtaatta 41879146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 5819800 - 5819741
Alignment:
Q  395 tttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaat 454  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  5819800 tttccccccttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaat 5819741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 11258913 - 11258809
Alignment:
Q  380 aggctaaagtgcacttttcccccct-taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||| |||||||| || ||||||||||||| ||||||||||| |||| || | |||||||||||||||||||  ||||||||| |||||||    
T  11258913 aggctaaagtgca-ttttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttag-tcccctaagatttagccc 11258816  T
Q  479 ctttgca 485  Q
    | |||||    
T  11258815 cattgca 11258809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 377 - 490
Target Start/End: Original strand, 16446150 - 16446262
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||| |||||  ||||||||||||||||| |||||||||| ||| ||||   ||||||||||||||||| |   ||| |||||||| |    
T  16446150 tttaggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaatttt-gataccccaagaattaac 16446248  T
Q  477 ccctttgcaatagt 490  Q
    || |||||||||||    
T  16446249 ccatttgcaatagt 16446262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 802692 - 802616
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||| ||||||||||||| || ||||||||| ||||||||||| |||| | || |||||||||||||||||    
T  802692 aggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaatttt 802616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 373 - 457
Target Start/End: Complemental strand, 18300831 - 18300749
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||| || |||||| ||||||||||||||  ||||||||| ||| |||||||||||||||| || | |||||||||||||||||    
T  18300831 aaaatataagctaaattgcacttttccccc--taactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt 18300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 18299373 - 18299476
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||||| || | || | | ||||||||||||||| | ||||||| || ||||||| |    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaatttt-ggccccctatgatttagccctt 18299471  T
Q  481 ttgca 485  Q
    |||||    
T  18299472 ttgca 18299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 32739622 - 32739706
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||| | ||||   ||| ||||||||||||| ||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  32739622 aggctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 384 - 549
Target Start/End: Original strand, 13567975 - 13568137
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||| ||||||||||   ||| ||||||||| ||||||||||| |||| ||   |||||||||||||||||   |||   || ||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttgatccc---aaaaattagcccctttg 13568071  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatt 549  Q
    ||||||| |||||||    ||||||||||   |||||| |  || ||||| |||||||||||||||    
T  13568072 caatagtagtcatttaggtcaattttgactcggtcaacgcctatatggcaggccacgtgtgtaatt 13568137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 18868921 - 18869000
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| || | ||   |||||||||||||||||    
T  18868921 ttaggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 487
Target Start/End: Original strand, 41878092 - 41878199
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaa---agttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||| |||||||||||||||||||   | ||||||||||| |||| || | ||| ||||||||||||| | |||| ||||| ||||||    
T  41878092 ggctaaagtgcacttt-ccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaatttt-ggccccttaagatttagcc 41878189  T
Q  478 cctttgcaat 487  Q
    || |||||||    
T  41878190 ccattgcaat 41878199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 28365509 - 28365577
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    |||||||||| |||||||||| |||||||| ||| |||||||||| ||||||||||| |||||| |||||    
T  28365509 ttaggctaaaatgcacttttcaccccttaaattttaaaaagttgcgattttgacccc-tatgaaaaaaaa 28365577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 13030293 - 13030392
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctt 481  Q
    |||||||||||||||||||||  ||||||||||||| ||| ||||||| |||| || | ||||||| ||||||||| | |||||||||| ||||| | ||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttttg-ccccctaagatttagctcttt 13030388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 384 - 490
Target Start/End: Complemental strand, 8535752 - 8535649
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||| ||||||||| ||  ||||||| ||||| ||| |||||||| ||  || | | | ||||||||||||| | |||||||||||||||||||||||    
T  8535752 taaagtacacttttcctcc--taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaatttt-gaccccctaagaattagcccctttg 8535656  T
Q  484 caatagt 490  Q
    |||||||    
T  8535655 caatagt 8535649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 380 - 547
Target Start/End: Original strand, 11257621 - 11257786
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||| | ||  ||||||||||||| |||||||||| | ||| || | | ||||||||||||||| | || ||||||| ||||||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaatttt-ggcctcctaagatttagcccc 11257718  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
     ||||||   || || |||| | ||||||||||  ||||||| |     |||||||||||||||||||    
T  11257719 attgcaaatttgatccttttgatcaattttgacatagtcaacgcctgcgtggcatgccacgtgtgtaa 11257786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 13830270 - 13830332
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||||||||||||||||||| || ||| |||||||||| ||||||||||| |||||| |||||    
T  13830270 taaagtgcacttttcccccct-aagtttgaaaaagttgcgattttgaccccctatgaagaaaaa 13830332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 372 - 547
Target Start/End: Original strand, 26544140 - 26544313
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    ||||||||| | |||||||||||||||  ||| ||| ||| ||||| || ||||||||   || || | |||||||||||| |||||||| || |||||     
T  26544140 taaaatttaagataaagtgcacttttctacccctaatttttaaaaatttacaattttggttcc-taagtacaaaaactacagttttagcctcc-taagat 26544237  T
Q  472 ttagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    ||||| ||||||||    ||||| |||| | ||||||||||| ||||||| |  || ||||||||| |||||||||    
T  26544238 ttagcacctttgcatatttggtccttttgatcaattttgaccaagtcaacgcatatgtggcatgccgcgtgtgtaa 26544313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 13570659 - 13570558
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| |||||  ||| ||||||||||||| ||||||||||   ||| || | |||||||||| |||||| | ||||| ||||||||| |||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtccccc-aagaattagtccc 13570561  T
Q  480 ttt 482  Q
    |||    
T  13570560 ttt 13570558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 405 - 550
Target Start/End: Original strand, 22587525 - 22587667
Alignment:
Q  405 taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcatttttagca 504  Q
    |||||||||||||||| ||||||||  ||| |||  ||||||||||||||||| | |||||||||| |||||| |||||||    ||||| ||||   ||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaatttt-ggccccctaagatttagcctctttgcatctttggtccttttggcca 22587622  T
Q  505 attttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||||| ||||||  |  |  ||||||||||||||||||||||    
T  22587623 attttgacc-agtcaatgcctacatggcatgccacgtgtgtaatta 22587667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 453
Target Start/End: Original strand, 5362188 - 5362247
Alignment:
Q  394 ttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaa 453  Q
    ||||| |||| ||||||||| |||||||| |||||| ||||||| ||| |||||||||||    
T  5362188 ttttcgccccctaactttcacaaagttgcgattttggccccataagaaaaaaaactacaa 5362247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 8534586 - 8534689
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||| |||||||||| |||| ||||||||| || ||||||||| ||  || | | | ||||||||||||| | ||||  ||||||||||| |||||    
T  8534586 taaagtgctcttttccccc-ttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc--aagaattagcctctttg 8534682  T
Q  484 caatagt 490  Q
    |||||||    
T  8534683 caatagt 8534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 21837355 - 21837303
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||||||||| ||||  ||||||||||||| ||||||||||| ||||    
T  21837355 aggctaaagtgcactttttcccc--taactttcaaaaacttgcaattttggcccc 21837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 22067886 - 22067800
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc--atatgaacaaaaactacaattttagccccc 464  Q
    ||||||| ||||||||||  |||  ||| ||| ||||||||||||||||   | |  ||||||||||||||||||||||||||||||    
T  22067886 aggctaaggtgcacttttatccctctaagtttgaaaaagttgcaattttagtctcttatatgaacaaaaactacaattttagccccc 22067800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 443 - 521
Target Start/End: Original strand, 1091757 - 1091834
Alignment:
Q  443 aaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaac 521  Q
    |||| |||||||||| | |||| ||||| ||||||  |||||||||||||||||||||  |||||||||  ||||||||    
T  1091757 aaaagctacaatttt-gaccccttaagatttagcctatttgcaatagtggtcatttttgtcaattttgattgagtcaac 1091834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 505 - 546
Target Start/End: Original strand, 1033322 - 1033363
Alignment:
Q  505 attttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||    
T  1033322 attttgacctagtcaacgctgatttggcatgccacatgtgta 1033363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 11176218 - 11176145
Alignment:
Q  374 aaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||||||||||||||||||||||  || | ||  |||||||| ||||| ||||||||||| ||| || |||||    
T  11176218 aaatttaggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaa 11176145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 26829390 - 26829329
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaa 441  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||| |||||| |||| ||||||    
T  26829390 aggctaaagtgcacttttcatcccttaagttttaaaatgttgcgattttggccccctatgaa 26829329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 405 - 485
Target Start/End: Original strand, 28617946 - 28618024
Alignment:
Q  405 taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgca 485  Q
    ||||||||||||  ||||||||||| ||||  | | ||||||||| |||||||   |||||||||| ||||||||||||||    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt--gccccctaagatttagcccctttgca 28618024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 52827346 - 52827511
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || | || ||||| |||| |||| ||||||||||| ||||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttaacccccctaagatttagcccc 52827444  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   ||||| |||| | ||||||||||| ||||||| | ||||||||||||||| ||||||    
T  52827445 attgcaactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtgta 52827511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 379 - 488
Target Start/End: Complemental strand, 35067105 - 35066997
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||||||| | |||||||| | |||||||    
T  35067105 taggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaatttt-ggccccctaatatttagccc 35067007  T
Q  479 ctttgcaata 488  Q
    ||||||||||    
T  35067006 ctttgcaata 35066997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 381 - 546
Target Start/End: Original strand, 41364829 - 41364992
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||| |||| ||   || ||||| ||||||| ||||||||||||| ||||||||     
T  41364829 ggctaaagtgcacttttctcccct-aactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt-agcccccctaagatttagcccca 41364926  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||||||   |||||||||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  41364927 ttgcaactttggtcattttgatcaattttgacctagtcaacgctgatttggcatgccacatgtgta 41364992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 381 - 530
Target Start/End: Original strand, 51684366 - 51684514
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| | ||||||||||||||| | |||||||||| |||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaatttt-ggccccctaagatttagcccct 51684464  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttg 530  Q
    |||||    ||||| ||||   ||||||||||| ||||||| ||||||||    
T  51684465 ttgcatctttggtccttttggccaattttgaccaagtcaacgctgatttg 51684514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 377 - 547
Target Start/End: Original strand, 24422796 - 24422965
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||| | |||||||||| |||||    
T  24422796 tttaggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt-ggccccctaagatttagc 24422894  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    ||| ||||||   || || ||||   ||||||||||  ||||||| |   | |||||||||||||||||||    
T  24422895 cccattgcaaatttgatccttttggtcaattttgacatagtcaacgcctgtgtggcatgccacgtgtgtaa 24422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 377 - 546
Target Start/End: Complemental strand, 52828175 - 52828007
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| |||||||||||||||||||  ||| ||||||||| ||||||||||| | || || | || ||||| ||||||| ||||||||||||| |||||    
T  52828175 tttaggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaattt-agcccccctaagatttagc 52828077  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    ||| ||||||   ||||| |||| | ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  52828076 cccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatttggcatgccacatgtgta 52828007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 375 - 556
Target Start/End: Complemental strand, 35595300 - 35595119
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagtt-gcaattttgaccccatatgaacaaaaacta-caattttagcccccctaagaat 472  Q
    |||||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||| |||| | |||||||| ||||||| |||||  ||||| |    
T  35595300 aatttaggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc--taagatt 35595203  T
Q  473 tagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||||||||||    ||||| ||||   ||||||||||| ||||||  |||||||||||||||||||||||||||| |||||    
T  35595202 tagcccctttgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacgtgtgtaattaaccatt 35595119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 377 - 485
Target Start/End: Complemental strand, 51685870 - 51685763
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||  |||| ||||||||||||||||| | |||||||||| |||||    
T  51685870 tttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaatttt-gaccccctaagatttagc 51685772  T
Q  477 ccctttgca 485  Q
    |||||||||    
T  51685771 ccctttgca 51685763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 377 - 550
Target Start/End: Complemental strand, 11437304 - 11437132
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||| || | ||||||||||||||||| | |||||||||| ||| |    
T  11437304 tttaggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaatttt-ggccccctaagatttaac 11437206  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    || ||| ||    || || ||||   ||||||||||||||||||| || |  ||||||||||||||| ||||||    
T  11437205 ccttttacatctttgatccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgtataatta 11437132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 377 - 485
Target Start/End: Complemental strand, 45150075 - 45149968
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||| |||| || | |||||||| ||||||||  ||||||||||| |||||    
T  45150075 tttaggttaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagc 45149977  T
Q  477 ccctttgca 485  Q
    |||||||||    
T  45149976 ccctttgca 45149968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 379 - 547
Target Start/End: Complemental strand, 12390084 - 12389918
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||| |||| ||||||| || |||||| ||||||   ||| |||||||    
T  12390084 taggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccc--tagatttagccc 12389987  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaac-actgatttggcatgccacgtgtgtaa 547  Q
    |||||||||| | ||| |||| | | ||||||||| | |||||  ||| | |||||||||||||||||||    
T  12389986 ctttgcaataatagtccttttgatctattttgacccaatcaacgtctg-tgtggcatgccacgtgtgtaa 12389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 380 - 556
Target Start/End: Original strand, 35594216 - 35594389
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || | |  ||||||||||||||    ||||||| | ||||||||    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccc-taagtattaaaactacaatttt--gacccctaaaatttagcccc 35594312  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||||||    ||||| ||||   ||||||||||   |||||| || ||||||||||||||||||||||||| |||||    
T  35594313 tttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaattaaccatt 35594389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 372 - 485
Target Start/End: Original strand, 45148572 - 45148683
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||| || | | ||||||||||||||| ||||||||||||     
T  45148572 taaaattttggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaatttt-gcccccctaagat 45148669  T
Q  472 ttagcccctttgca 485  Q
    ||| ||||||||||    
T  45148670 ttaacccctttgca 45148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 380 - 486
Target Start/End: Complemental strand, 33088719 - 33088614
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||| |  |||| |||||||| |||||||||||||||  || | ||||||||||||||||| ||| |||||||| ||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaatttt-gcctccctaagatttagcccc 33088621  T
Q  480 tttgcaa 486  Q
    |||||||    
T  33088620 tttgcaa 33088614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 550
Target Start/End: Complemental strand, 39153214 - 39153050
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||| | ||| |||||| ||| ||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt-gaccctctaagatttaacccctttg 39153116  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||    ||||| ||||   ||||||||||| ||||||  |  |  ||||||||||||||||||||||    
T  39153115 catctttggtccttttggtcaattttgacc-agtcaatgcctacgtggcatgccacgtgtgtaatta 39153050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 52274967 - 52275072
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| || | ||||||||||||||||| |  ||||||||| |||||| |    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt-gggcccctaagatttagcctc 52275065  T
Q  480 tttgcaa 486  Q
     ||||||    
T  52275066 attgcaa 52275072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 381 - 486
Target Start/End: Complemental strand, 39699867 - 39699764
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||||||||| || | ||| ||||||||||||| | |||||||||| ||||||||     
T  39699867 ggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaatttt-ggccccctaagatttagcccca 39699770  T
Q  481 ttgcaa 486  Q
    ||||||    
T  39699769 ttgcaa 39699764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 380 - 550
Target Start/End: Original strand, 11436041 - 11436210
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||   || | | ||||||||||||||| | |||||||||| ||| |||     
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaatttt-ggccccctaagatttaaccca 11436139  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||    ||||  ||||   ||||||||||||||||||| |  |  ||||||||||| ||||||||||    
T  11436140 tttgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtgtaatta 11436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 14999283 - 14999360
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| || | |||||||||||||||||    
T  14999283 taggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 384 - 486
Target Start/End: Complemental strand, 24426173 - 24426072
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||| |||||  ||||||||||||| ||||||||||| |||| || | |||||||||||||||||||  ||||||||| |||||||| |||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttag-tcccctaagatttagccccattg 24426075  T
Q  484 caa 486  Q
    |||    
T  24426074 caa 24426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 41366232 - 41366068
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||||| | |||||||||||||  |||||||||  |||| || | |  ||||| |||| ||||| |||||||||| ||||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttag-ccccctaagatttagcccc 41366135  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
     ||||||   ||||| |||| | || |||||||| ||||||| ||||||||||||| ||| ||||||    
T  41366134 attgcaactttggtccttttgaccacttttgacctagtcaacgctgatttggcatgtcacatgtgta 41366068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 43058777 - 43058885
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||||| |||| |||||| ||||||| |||||| |||||| ||||| |||||||||||||||| || | ||||||||||||||||||| ||| ||||||     
T  43058777 taaaatgtaggttaaagtacactttttccccct-aactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttag-ccctctaagat 43058874  T
Q  472 ttagccccttt 482  Q
    |||||||||||    
T  43058875 ttagccccttt 43058885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 380 - 550
Target Start/End: Original strand, 36612852 - 36613020
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||    | || | ||||||||||||||||||  |||||||||| |||| |||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttg-gatcttaagtacaaaaactacaatttta-accccctaagatttagtccc 36612949  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||    ||||||||||   ||||||| ||  | ||||| || |  ||||| ||||||||||||||||    
T  36612950 tttgcatctttggtcattttggtcaattttaacttattcaacgcttacgtggcaggccacgtgtgtaatta 36613020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 38336909 - 38336812
Alignment:
Q  36 gtggttggagaagatgaggtggggtggtgaggatggaagagtttgagtagattcgatggtgggggtgaacgacggtggtgaggagaaggatgggtgatg 134  Q
    |||||| || || ||||||||||||||||| ||||||    ||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  38336909 gtggttagaaaatatgaggtggggtggtgatgatggattgatttgagtagtttcgatggtgggg-tgaacggcggtggtgaagagaaggatgggtgatg 38336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 381 - 486
Target Start/End: Complemental strand, 36614005 - 36613901
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||| |||||| ||| ||||||| ||||| ||| ||||||| |||| || | ||||||||||||||||| | |||||||||| |||||| ||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaatttt-gaccccctaagatttagcctct 36613907  T
Q  481 ttgcaa 486  Q
    ||||||    
T  36613906 ttgcaa 36613901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 376 - 457
Target Start/End: Original strand, 39151926 - 39152007
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||| ||||||||| |||| ||||||||| ||||||||| ||| ||||||| |||| |||| |||||||||||||||||    
T  39151926 atttaggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaatttt 39152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 45157310 - 45157234
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||| ||||||| || ||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  45157310 aggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 45157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 46066519 - 46066605
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    ||||| |||| |||||||||||||| ||  |||||||||||||||||| |||||  |||| |||| |||||||||||||||||||||||    
T  46066519 aattttggcttaagtgcacttttcctcc--taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagcccc 46066605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 461 - 550
Target Start/End: Original strand, 46524618 - 46524706
Alignment:
Q  461 ccccctaagaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||||| |||||||||||||||| ||| || ||||   ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  46524618 ccccctaagatttagcccctttgcaattgtgatc-ttttggccaattttgaccaagtcaacgcttatttggcatgccacgtgtgtaatta 46524706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 461 - 550
Target Start/End: Complemental strand, 46525822 - 46525734
Alignment:
Q  461 ccccctaagaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||||| |||||||||||||||| ||| || ||||   ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  46525822 ccccctaagatttagcccctttgcaattgtgatc-ttttggtcaattttgaccaagtcaacgcttatttggcatgccacgtgtgtaatta 46525734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 43060111 - 43060031
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||||| ||||| |||||  ||||||||||||| ||| |||||||||||| || | |||||||||||||||||    
T  43060111 tttaggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaatttt 43060031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 23980570 - 23980464
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||| | || || | |||||||||| |||||| |  | ||||||| ||||||    
T  23980570 ttaggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataatttt-ggtctcctaagatttagcc 23980472  T
Q  478 cctttgca 485  Q
    ||||||||    
T  23980471 cctttgca 23980464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 16290091 - 16290224
Alignment:
Q  379 taggctaaagtgcacttttcccccct-taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||| |||| |||| | |||| ||||||||||||||||||||  ||| |||| | |||||||||||||||| || ||| |||||||| ||    
T  16290091 taggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacctccc-aagaattaacc 16290189  T
Q  478 cctttgcaatagtggtcatttttagcaattttgac 512  Q
    ||||| ||    |||||||||||  ||||||||||    
T  16290190 cctttacatatttggtcattttttccaattttgac 16290224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 381 - 462
Target Start/End: Complemental strand, 39222575 - 39222493
Alignment:
Q  381 ggctaaagtgcacttttcccccctt-aactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccc 462  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||| || | | |||||||||||| |||||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccc 39222493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 37526986 - 37526876
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||| | || ||   | | |||| |||||||| |  ||||||||| |    
T  37526986 aaaattaaggttaaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttgg--cccctaagatt 37526889  T
Q  473 tagcccctttgca 485  Q
    |||||||||||||    
T  37526888 tagcccctttgca 37526876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 379 - 547
Target Start/End: Complemental strand, 52276266 - 52276099
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||| ||||   ||||||||||||| ||| ||||||| |||| || | |||||||||| || |||||  ||||||||| |||||||    
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttag-tcccctaagatttagccc 52276168  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    | ||||||   || || |||| | ||||||||||| ||||||| ||    |||||||||||| ||||||    
T  52276167 cattgcaaatttgatccttttgatcaattttgacctagtcaacgcttgcatggcatgccacgcgtgtaa 52276099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 11190382 - 11190433
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  11190382 ttaggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttg 11190433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 17505038 - 17505109
Alignment:
Q  459 gcccccctaagaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttg 530  Q
    ||||||| |||||||||||| ||||||||| || |  |||||  ||||||||||||||||||||||||||||    
T  17505038 gcccccccaagaattagcccatttgcaatattgatattttttgtcaattttgaccgagtcaacactgatttg 17505109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 45156052 - 45156126
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttta 458  Q
    |||||| ||||||||| ||||||| ||||||||| || |||||||||||   |||| ||||||||||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaatttta 45156126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 50680330 - 50680434
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||| |||||||| |||||||| |||||| ||||||||||| |||| || | | |||||||| ||||||||  ||||||||| ||| |||    
T  50680330 taggttaaagtgcatttttcccc-cttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttag-tcccctaagatttaaccc 50680427  T
Q  479 ctttgca 485  Q
    |||||||    
T  50680428 ctttgca 50680434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 30249588 - 30249515
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||| ||||| || ||||||||||||||||| |||||||| |   |||| |||||||||||||||||    
T  30249588 taaagtgcactcttccctccgtaactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaatttt 30249515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 39698562 - 39698639
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||| |||||||||||||| ||||| || |||||||| |||| || | ||| |||||| ||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataatttt 39698639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 50681705 - 50681657
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttg 50681657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 379 - 486
Target Start/End: Original strand, 7983048 - 7983153
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| ||||||||||||||| ||| | ||||||||| || ||||||||||| |||| |||| |  ||||| |||||||| |||||||||||| ||| |||    
T  7983048 taggttaaagtgcacttttctcccgt-aactttcaacaacttgcaattttggccccctatgtatcaaaaccacaatttt-gcccccctaagatttatccc 7983145  T
Q  479 ctttgcaa 486  Q
    | ||||||    
T  7983146 cattgcaa 7983153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 708 - 755
Target Start/End: Original strand, 46524850 - 46524897
Alignment:
Q  708 aaaatccagaaaatattacatgaatcttttcaacaacaacaacaatct 755  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||    
T  46524850 aaaatccagaaaatacaacatgaatctcttcaacaacaacaacaatct 46524897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 7674526 - 7674602
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||| ||||||||||| ||||||| ||||| |||||||||||  ||| || | |||||||||||||||||    
T  7674526 taggctaaagtgcccttttcccccc-taacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 7675561 - 7675457
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||| ||||| || || |||||||||||||| ||||||||||| || | || | | ||||| || |||||| | |||||||||| |||||||    
T  7675561 taggctaaagtgtacttt-ccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataatttt-gaccccctaagatttagccc 7675464  T
Q  479 ctttgca 485  Q
    |||||||    
T  7675463 ctttgca 7675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 43378810 - 43378711
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||| | | |||||||||||||| || ||||||||| ||| || | ||||||| ||||||||| | || ||||||| ||||| ||||||    
T  43378810 taaagtgcacttttctctc-ttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaatttt-gaccacctaagatttagcacctttg 43378713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 2260685 - 2260629
Alignment:
Q  374 aaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttga 430  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||||||||| |||||||    
T  2260685 aaatttaagctaaagtgcacttttcatcccttaagttttaaaaagttgcgattttga 2260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 14512643 - 14512556
Alignment:
Q  462 cccctaagaattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||| || ||||||||||||||||||||  | ||||  |||||||||||| ||||||| |  |  ||||||||||||||||||||||    
T  14512643 cccctatgatttagcccctttgcaatagtga-ctttttaggcaattttgacctagtcaacgcctaagtggcatgccacgtgtgtaatta 14512556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  380 aggctaaagtgcacttttcccccct-taactttcaaaaagttgcaattt 427  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 44404441 - 44404525
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||| ||||||||| ||| | ||||||||||||| | ||||||||  |||| || | |||||||||| |||||| ||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccc 44404525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 4059521 - 4059604
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    ||||||||||||||||||| |||| ||  |||||||| ||||| |||||| |||| ||| || ||||| | ||||||| |||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaattgcaattttggcccc 4059604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaat 454  Q
    |||||||||| ||||||| || || ||||||| ||||| |||||||||||| ||| || | |||||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 16281371 - 16281318
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||| || ||||  || ||||||||||||| ||||||||||||||||||    
T  16281371 ggctaaagtacatttttttccacttaactttcaaatagttgcaattttgacccc 16281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 29182001 - 29182054
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||| ||||||| ||| |||| ||||||||||||| ||||||| ||||    
T  29182001 ggctaaagtgtacttttcaccctttaagtttcaaaaagttgtaattttggcccc 29182054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 660 - 721
Target Start/End: Original strand, 46066822 - 46066883
Alignment:
Q  660 cttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaaat 721  Q
    |||||| ||||| ||||||||||||||| |||  | |||||||||||||||| ||| |||||    
T  46066822 cttcattttctcattcattttcttaacaacttcgtcttcttctcaaccaaaacccaaaaaat 46066883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 737 - 795
Target Start/End: Original strand, 46524900 - 46524958
Alignment:
Q  737 tcaacaacaacaacaatcttcatnnnnnnntccagaaaatcatctcagaaacccaaatt 795  Q
    |||||||||||||||||||||||       ||||||||||||||||| || ||||||||    
T  46524900 tcaacaacaacaacaatcttcataaaaaaatccagaaaatcatctcaaaatcccaaatt 46524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 808 - 853
Target Start/End: Original strand, 46524945 - 46524990
Alignment:
Q  808 caaaaacccaaattgtttctgttcgattttcaaaagctattccgac 853  Q
    ||||| |||||||||||||| |||||||| ||| ||||||||||||    
T  46524945 caaaatcccaaattgtttctattcgatttgcaatagctattccgac 46524990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 8e-36; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 377 - 550
Target Start/End: Original strand, 28538672 - 28538843
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || | ||||||||||||||||||| |||||||||| |||||    
T  28538672 tttaggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttag-ccccctaagatttagc 28538770  T
Q  477 ccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||||||||   || || |||||  |||||||||||| |||||     || ||||||||||||||||||||||    
T  28538771 ccctttgcaactttgatcctttttgtcaattttgaccg-gtcaatgtctatgtggcatgccacgtgtgtaatta 28538843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 384 - 556
Target Start/End: Original strand, 42195137 - 42195306
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||| |||| |||| |||||| |||||||||| | |||| ||||| ||||||||||||    
T  42195137 taaagtgcacttttccccc-ttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccc-taagatttagcccctttg 42195233  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||    ||||| ||||   ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  42195234 catctttggtccttttggtcaattttgaccaagtcaacgctgatttggcatgccacgtgtgtaattagccatt 42195306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 370 - 546
Target Start/End: Complemental strand, 5778948 - 5778773
Alignment:
Q  370 tataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaag 469  Q
    |||||| | ||||||||||||||||||||||||  ||||||||||||| ||||||||||  |||| || | || ||||| ||||||| ||||||||||||    
T  5778948 tataaattgtaggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaattt-agcccccctaag 5778850  T
Q  470 aattagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgta 546  Q
    | |||||||| ||||||   ||||| |||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  5778849 atttagccccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtgta 5778773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 25523065 - 25523172
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| || | ||||||||||||||||| | |||||||||| |||||    
T  25523065 tttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt-gaccccctaagatttagc 25523163  T
Q  477 ccctttgca 485  Q
    |||||||||    
T  25523164 ccctttgca 25523172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 42196309 - 42196127
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaat 472  Q
    ||||| |||||||||||||||||| |||||| ||||||| |||||||||  | |||| |||  |||| |||||||||||| ||||||  ||||||||| |    
T  42196309 aaaatataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttag-tcccctaagatt 42196211  T
Q  473 tagcccctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    |||||| ||||||    ||||| ||||   ||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||    
T  42196210 tagcccatttgcatctttggtccttttggtcaattttgaccaagtcaacgctgatttggcatgccacatgtgtaattaaccatt 42196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 379 - 550
Target Start/End: Complemental strand, 16650958 - 16650788
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| || | | |||||||||||||||||| ||||||||  |||||||    
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagc-cccctaaggtttagccc 16650860  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
     ||||||    ||||| ||||   ||||||||| | ||||||| |   | ||||||||||||||||||||||    
T  16650859 atttgcatctttggtccttttggtcaattttgatcaagtcaacgcatgtgtggcatgccacgtgtgtaatta 16650788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 379 - 550
Target Start/End: Original strand, 25055410 - 25055580
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||  ||||||| ||    |||||||||||| ||| |||| | ||||||||||||||| |||||| ||||| |||||||    
T  25055410 taggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccc-taagatttagccc 25055508  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
     ||||||    ||||| |||| | ||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  25055509 atttgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtgtaatta 25055580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 376 - 490
Target Start/End: Complemental strand, 20216869 - 20216756
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||  | || |||  ||||||||||||||||| ||||||| |||||||||    
T  20216869 atttaggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggcccccc-aagaattag 20216771  T
Q  476 cccctttgcaatagt 490  Q
    ||| |||||||||||    
T  20216770 cccatttgcaatagt 20216756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 20214196 - 20214363
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||  | |  |||| ||||||||||||||||| ||||| | |||||||| ||| |    
T  20214196 ggctaaagtgcacttttcccc-cttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctc-aagaattatcccat 20214293  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||||| ||| ||| |  ||||||||||   |||||| |  || ||||| ||||||||||||||||    
T  20214294 ttgcaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtgtaatta 20214363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 375 - 486
Target Start/End: Original strand, 5777895 - 5778003
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    |||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||||| || | || ||||| |||| |||||||||||||||| |||    
T  5777895 aatttaggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaa-tttagcccccctaagattta 5777991  T
Q  475 gcccctttgcaa 486  Q
    ||||| ||||||    
T  5777992 gccccattgcaa 5778003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 18487005 - 18486900
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| || | | | |||| |||||||| | |||||||||| |||||||    
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaatttt-ggccccctaagatttagccc 18486907  T
Q  479 ctttgca 485  Q
    |||||||    
T  18486906 ctttgca 18486900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 550
Target Start/End: Original strand, 24332916 - 24333080
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||| | ||| |||||| ||| ||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt-gaccctctaagatttaacccctttg 24333014  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||    ||||| ||||   ||||||||||| ||||||  |  |  ||||||||||||||||||||||    
T  24333015 catctttggtccttttggtcaattttgacc-agtcaatgcctacgtggcatgccacgtgtgtaatta 24333080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 380 - 550
Target Start/End: Complemental strand, 36486590 - 36486422
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||| |||||||||||| ||||| ||||||| ||||| |||||||||||||||| || | ||||||||||||||||| |  ||||||||| |||| |||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt-ggtcccctaagatttagtccc 36486492  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||||   || || |||||  |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  36486491 tttgcaactttgatcctttttgtcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 36486422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 19752911 - 19753014
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| || | ||||||||||||||||| | ||||||| || ||||||||    
T  19752911 aggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-ggccccctatgatttagcccc 19753008  T
Q  480 tttgca 485  Q
     |||||    
T  19753009 attgca 19753014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 381 - 457
Target Start/End: Complemental strand, 22940723 - 22940647
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || | ||||||| |||||||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt 22940647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 370 - 487
Target Start/End: Complemental strand, 40255784 - 40255668
Alignment:
Q  370 tataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaag 469  Q
    |||||||  ||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| ||   ||| ||||||||||||| | |||||||||    
T  40255784 tataaaagataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaatttt-ggccccctaag 40255686  T
Q  470 aattagcccctttgcaat 487  Q
    | ||| |||| |||||||    
T  40255685 atttaaccccattgcaat 40255668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 381 - 556
Target Start/End: Complemental strand, 25056482 - 25056307
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc-cc 479  Q
    ||||||||||||||||||| | | ||||||||||||| |||||||||||||||| || | |  |||||||||||||| | |||||||||| |||||| |     
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt-gaccccctaagatttagcctca 25056384  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||| ||    ||||  ||||   ||||||||||   |||||| || ||||||||||||||||||||||||| |||||    
T  25056383 tttacatctttggttgttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaattaaccatt 25056307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 21835040 - 21835144
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||| |||| || || ||| |||||||||  ||||||||||| |||| ||||||||||||||||| | |||||||||| ||| ||||    
T  21835040 aggctaaagtgcactttccccctct-aagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaatttt-gaccccctaagatttaacccc 21835137  T
Q  480 tttgcaa 486  Q
    |||||||    
T  21835138 tttgcaa 21835144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 384 - 550
Target Start/End: Complemental strand, 28539917 - 28539754
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||| ||||||||||| |||||| ||||| |||||||||||||||  || | ||||||||||||||||| |  ||||||||| |||| |||||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttt-ggtcccctaagatttagtccctttg 28539820  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||   || || |||||  |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  28539819 caactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 28539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 1015483 - 1015587
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||| ||| ||||||||||| ||| ||||||| |||||||| |||||||| |||| | || |||||| |||||||||||  ||||||||||||||| |||    
T  1015483 aggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaatttta-accccctaagaattagtccc 1015581  T
Q  480 tttgca 485  Q
    ||||||    
T  1015582 tttgca 1015587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 375 - 488
Target Start/End: Original strand, 38834081 - 38834192
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    ||||| || ||||||||| ||||  |||||||||||| |||||||||| ||||||| ||| |||| ||||||||||||||||||| | |||||||| |||    
T  38834081 aattttggttaaagtgcatttttttccccttaacttttaaaaagttgcgattttga-cccttatgtacaaaaactacaattttag-ctccctaagattta 38834178  T
Q  475 gcccctttgcaata 488  Q
    |  |||||||||||    
T  38834179 gttcctttgcaata 38834192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 36485293 - 36485432
Alignment:
Q  374 aaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatt 473  Q
    |||||| | |||||||||| |||||| ||| ||||||| ||||| || ||||||||||| | || | |||||||||| |||||| | |||||||||| ||    
T  36485293 aaattttgactaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataatttt-ggccccctaagattt 36485391  T
Q  474 agcccctttgcaatagtggtcatttttagcaattttgaccg 514  Q
    | |||||||||||   || ||||||||  ||||||||||||    
T  36485392 aacccctttgcaactttgatcatttttgtcaattttgaccg 36485432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 379 - 478
Target Start/End: Complemental strand, 33160389 - 33160291
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||| || | | | ||||||||||||| | |||| ||||| |||||||    
T  33160389 taggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaatttt-gaccccttaagatttagccc 33160291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 2373134 - 2373212
Alignment:
Q  368 attataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaa 446  Q
    |||||||| ||||| |||||||||||||||| |||||||| ||| |||||||||| |||||  ||||||||||| ||||    
T  2373134 attataaattttagactaaagtgcacttttcaccccttaagttttaaaaagttgcgattttagccccatatgaaaaaaa 2373212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 18154492 - 18154569
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||||||| ||||||  |||||||||||||||||| || ||||||||||||| || | |||||||||||||||||    
T  18154492 taggctaaagtgaacttttttccccttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaatttt 18154569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 20653812 - 20653886
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||||||||||||||||||||||||  | ||||| ||| |||||||||| ||||||||||| |||||| |||||    
T  20653812 aaaatttaggctaaagtgcacttttcatctcttaagttttaaaaagttgcgattttgaccccttatgaaaaaaaa 20653886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 38476785 - 38476715
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||  ||||||||||| |||||| |||||    
T  38476785 tttaggctaaagtgcacttttcaccccttaagttttaaaaagttgtgattttgaccccctatgaaaaaaaa 38476715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 381 - 490
Target Start/End: Original strand, 1796054 - 1796162
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||| |||||| ||| ||||||||||||| |||||| |||| || | || | ||||||||||||||||| |  |||| |||||||| ||| |    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaatttt-gatcccccaagaattaacccat 1796152  T
Q  481 ttgcaatagt 490  Q
    ||||||||||    
T  1796153 ttgcaatagt 1796162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 33158097 - 33158174
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||| ||||  |||| ||||||||||||| ||||||||||||| || || | |||||||||||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaatttt 33158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 5730439 - 5730490
Alignment:
Q  379 taggctaaagtgcacttttcccc-ccttaactttcaaaaagttgcaattttg 429  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttg 5730490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 19754234 - 19754128
Alignment:
Q  379 taggctaaagtgcacttttc-cccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||| ||||  ||||| ||||||||||||| ||||||||||| |||| ||   ||||||||||||||||| | ||||||| || ||||||    
T  19754234 taggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt-ggccccctatgatttagcc 19754136  T
Q  478 cctttgca 485  Q
    || |||||    
T  19754135 ccattgca 19754128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 21835019 - 21834941
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagc 460  Q
    |||||||||||||||||||||  | || ||| |||||||||||| |||||||   |||||||||||||||||||||||||    
T  21835019 ggctaaagtgcacttttcccctat-aagtttgaaaaagttgcaaatttgaccttctatgaacaaaaactacaattttagc 21834941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 410 - 539
Target Start/End: Complemental strand, 5730934 - 5730806
Alignment:
Q  410 ttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcatttttagcaatttt 509  Q
    |||||||| || |||||||| |||| || | || ||||| ||||||| || |||||||||| ||| |||| ||||||   ||||  |||| | |||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaattt-agtccccctaagatttaaccccattgcaactttggttcttttgatcaatttt 5730836  T
Q  510 gaccgagtcaacactgatttggcatgccac 539  Q
    |||| ||||||| |||||||||||||||||    
T  5730835 gacctagtcaacgctgatttggcatgccac 5730806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 477
Target Start/End: Original strand, 7311585 - 7311685
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    ||||||||||||||||||    |||||| ||||||||||||| ||||||| ||| || |  | | ||||||||||||||||||| |||||||||| ||||    
T  7311585 atttaggctaaagtgcacccccccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttag-ccccctaagatttag 7311683  T
Q  476 cc 477  Q
    ||    
T  7311684 cc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 379 - 457
Target Start/End: Complemental strand, 25524231 - 25524152
Alignment:
Q  379 taggctaaagtgcacttttcc-ccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||||||| |||| ||| ||| ||||| ||| ||||||| |||| || | |||||||||||||||||    
T  25524231 taggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 31576664 - 31576610
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||| |||||||| ||| |||||||||| |||||| ||||    
T  31576664 aggctaaagtgcacttttcaccccttaagttttaaaaagttgcgattttgtcccc 31576610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 2373458 - 2373401
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    |||||||||||||||| ||||||||||  ||| ||| |||||||||||||| ||||||    
T  2373458 taaaatttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttg 2373401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 660 - 716
Target Start/End: Complemental strand, 2686197 - 2686141
Alignment:
Q  660 cttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaatccag 716  Q
    |||||||||||| |||||||||| |||| ||| || |||||||||||||||| ||||    
T  2686197 cttcatcttctcattcattttctcaacaacttcatcttcttctcaaccaaaacccag 2686141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 15885132 - 15885180
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgac 431  Q
    ||||| |||||||||| |||||||| |||||||||||||| ||||||||    
T  15885132 ctaaattgcacttttcaccccttaagtttcaaaaagttgcgattttgac 15885180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 23040347 - 23040287
Alignment:
Q  374 aaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||| ||||||||||| ||||||||  ||||||| ||| |||||||||| |||||||||||    
T  23040347 aaatataggctaaagtacacttttcatcccttaagttttaaaaagttgcgattttgacccc 23040287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 719
Target Start/End: Complemental strand, 42196011 - 42195953
Alignment:
Q  660 cttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaa 719  Q
    |||||||||||| | ||||||||||||| ||| || |||||||||||||||| |||||||    
T  42196011 cttcatcttctcat-cattttcttaacaacttcatcttcttctcaaccaaaacccagaaa 42195953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 1797375 - 1797294
Alignment:
Q  404 ttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaa 486  Q
    |||| ||| ||||| ||||||||||| | || ||| |||||||||||||||||| |  ||| ||||| |||||||||||||||    
T  1797375 ttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaatttt-ggtcccttaagatttagcccctttgcaa 1797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 2186774 - 2186847
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttta 458  Q
    ||||||||| |||| |||||| || |||||||||||||||||||||  |   |||| ||||||||||||||||||    
T  2186774 taaagtgcattttttccccct-aagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaatttta 2186847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 18485137 - 18485191
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||||||||| ||||  ||||||| ||||| ||||||||||| ||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggcccc 18485191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  405 taactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatt 455  Q
    ||||||||||||| ||||||||||| | || |||| |||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 2189030 - 2188962
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaacta 450  Q
    |||||||| |||||||||| | ||||| |||||||||||||| ||||| | ||| |||| ||||||||||    
T  2189030 ggctaaagcgcacttttcctctcttaagtttcaaaaagttgcgatttt-agcccctatgtacaaaaacta 2188962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 233 - 400
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||| |||||||||| |||||| |  |||||||||||||||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataatttt-ggtcccctaagaattagcccct 331  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||    || || |||||  |||||||||||| |||||| |  || ||||||||||||||||||||||    
T  332 ttgcatatttgatcctttttcccaattttgaccg-gtcaacgcctatgtggcatgccacgtgtgtaatta 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 402 - 550
Target Start/End: Complemental strand, 1058 - 912
Alignment:
Q  402 ccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatagtggtcattttta 501  Q
    |||||||||| |||||||||||||||||  ||| |||| |||||||||| |||||| ||||||| |||||||||||||||||||    ||||| |||||     
T  1058 ccttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggcccccc-aagaattagcccctttgcatatttggtcctttttc 960  T
Q  502 gcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
     |||||||||||| |||||| || |  ||||||||||||||||||||||    
T  959 ccaattttgaccg-gtcaacgcttacgtggcatgccacgtgtgtaatta 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 22220388 - 22220556
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||||||  ||||||| ||| | |||||||||||||||| |||| | ||||||||||||||| | |||||||||| ||||||| |    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaatttt-ggccccctaagatttagcccat 22220486  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||    ||||| |||| | ||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  22220487 ttgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtgtaatta 22220556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 379 - 530
Target Start/End: Complemental strand, 8389792 - 8389642
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| |||||||||||||||||| ||||| |||||||||||||||||||||  ||| |||| |||||||||||||||||||  ||||||||| ||| |||    
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttag-tcccctaagatttaaccc 8389694  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttg 530  Q
    |||| || |  ||||| |||| | ||||||||||| ||||||  ||||||||    
T  8389693 ctttacatttttggtccttttgaacaattttgaccaagtcaaagctgatttg 8389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 380 - 556
Target Start/End: Complemental strand, 22221466 - 22221291
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || | |  |||||||||||||| | |||||||||| ||||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt-gaccccctaagatttagcccc 22221368  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||| ||    || || ||||   ||||||||||   |||||| || |||||| |||||||||||||||||| |||||    
T  22221367 tttacatctttgatccttttagccaattttgacttggtcaacgcttatttggtatgccacgtgtgtaattaaccatt 22221291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 380 - 556
Target Start/End: Complemental strand, 22227808 - 22227633
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| || | |  |||||||||||||| | |||||||||| ||||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt-gaccccctaagatttagcccc 22227710  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||| ||    || || ||||   ||||||||||   |||||| || |||||| |||||||||||||||||| |||||    
T  22227709 tttacatctttgatccttttagccaattttgacttggtcaacgcttatttggtatgccacgtgtgtaattaaccatt 22227633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 379 - 530
Target Start/End: Original strand, 11282006 - 11282156
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||  |||||||  |||||||| | |||||||||| ||| |||    
T  11282006 taggttaaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaatttt-gaccccctaagatttaaccc 11282104  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttg 530  Q
    |||||||||  || || |||| | ||||||||||  ||||||| ||||||||    
T  11282105 ctttgcaattttgatctttttgatcaattttgacaaagtcaacgctgatttg 11282156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 380 - 487
Target Start/End: Original strand, 12351920 - 12352026
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||| | |||||||||| |||||| |    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaatttt-gaccccctaagatttagcctc 12352018  T
Q  480 tttgcaat 487  Q
     |||||||    
T  12352019 attgcaat 12352026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 5513980 - 5514084
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||||||| |||| || | ||||||||||||||||| |||||||||| | |||||||    
T  5513980 taggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaatttt-gcccccctaaaatttagccc 5514077  T
Q  479 ctttgca 485  Q
    |||||||    
T  5514078 ctttgca 5514084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 10007866 - 10007761
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || | | | |||| |||||||| |  ||||||||| |||||||    
T  10007866 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaatttt-ggtcccctaagatttagccc 10007768  T
Q  479 ctttgca 485  Q
    |||||||    
T  10007767 ctttgca 10007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 384 - 550
Target Start/End: Original strand, 11287779 - 11287943
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||||||| | ||| ||||||| ||||| ||||||||||| |||  || | ||| ||||||||||||| | |||||||||||||| | ||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaatttt-ggccccctaagaattaactcctttg 11287877  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||  || ||||||||| |||||||||||| |||||| |  ||  |||||||||| ||||||||||    
T  11287878 caattttgatcatttttatcaattttgaccg-gtcaacgcctatgcggcatgccacatgtgtaatta 11287943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 29043392 - 29043499
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaatta 474  Q
    ||||||| ||||||| ||||||||| |||||||| |||||||||| || ||||||||||| |||| |||||||||||||||||   ||| |||||| |||    
T  29043392 aatttagcctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaatttt-ttccctctaagattta 29043490  T
Q  475 gcccctttg 483  Q
    |||||||||    
T  29043491 gcccctttg 29043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 380 - 547
Target Start/End: Complemental strand, 43661925 - 43661759
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| | ||  |||| |||||||||| |||||| | |||||||||| || ||||     
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaatttt-ggccccctaagatttcgccca 43661827  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
     |||||    ||||| |||| | ||||||||||| ||||||| |   | ||||||||||| |||||||    
T  43661826 attgcatctttggtccttttgatcaattttgaccaagtcaacgcatgtgtggcatgccacatgtgtaa 43661759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 8388463 - 8388564
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||||||  |||| |||| |||||||||| |||||| | |||||||||| ||||||||    
T  8388463 aggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataatttt-ggccccctaagatttagcccc 8388559  T
Q  480 tttgc 484  Q
    |||||    
T  8388560 tttgc 8388564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 369 - 485
Target Start/End: Original strand, 10006334 - 10006447
Alignment:
Q  369 ttataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaa 468  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| || | |  ||||| |||||||| | ||||||||    
T  10006334 ttataaaatt--ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt-ggccccctaa 10006430  T
Q  469 gaattagcccctttgca 485  Q
    || ||||||||||||||    
T  10006431 gatttagcccctttgca 10006447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 372 - 485
Target Start/End: Original strand, 24122874 - 24122985
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||| |||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||| || | |||||||||| ||||||||  |||||||||     
T  24122874 taaattttaggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttag-tcccctaagat 24122971  T
Q  472 ttagcccctttgca 485  Q
    |||||  |||||||    
T  24122972 ttagcttctttgca 24122985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 380 - 487
Target Start/End: Complemental strand, 12353461 - 12353357
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| || | || ||||||| |||||| | |||||||||| ||||||||    
T  12353461 aggctaaagtgcacttttccccc-ttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataatttt-ggccccctaagatttagcccc 12353365  T
Q  480 tttgcaat 487  Q
     |||||||    
T  12353364 attgcaat 12353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 380 - 547
Target Start/End: Original strand, 30335638 - 30335804
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||| |||||| ||||||||||| ||||| ||||||||||| | |  || | ||||||| ||||||||||  |||||||||| ||||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaatttta-accccctaagatttagcccc 30335736  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaa 547  Q
    ||||||    ||||| ||||   ||||||||||| ||||||| |   | ||||||||||| |||||||    
T  30335737 tttgcatctttggtccttttgttcaattttgaccaagtcaacgcatgtgtggcatgccacatgtgtaa 30335804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 377 - 500
Target Start/End: Complemental strand, 42982762 - 42982640
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    ||||||||||||||||||||||| || |||| ||| ||||||||| ||||||| |||| | | |||||||||||||||||| | ||||  ||||||||||    
T  42982762 tttaggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaatttt-gacccctcaagaattagc 42982664  T
Q  477 ccctttgcaatagtggtcattttt 500  Q
    || ||| ||||  || ||||||||    
T  42982663 ccatttacaattttgatcattttt 42982640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 36249552 - 36249618
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaa 447  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || | |||||| |||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctcctatgaataaaaa 36249618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 43661267 - 43661368
Alignment:
Q  383 ctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccccttt 482  Q
    ||||||||||||||||  ||||||| ||| |||||||| ||||||||  ||| |||| |||||||||| |||||| | |||||||||| |||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataatttt-ggccccctaagatttagccccttt 43661365  T
Q  483 gca 485  Q
    |||    
T  43661366 gca 43661368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 1823551 - 1823655
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||  || | ||||||||||||| ||| |  ||||||||| |||||||     
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaa-tttcggtcccctaagatttagccca 1823649  T
Q  480 tttgca 485  Q
    ||||||    
T  1823650 tttgca 1823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 1857996 - 1858100
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||  || | ||||||||||||| ||| |  ||||||||| |||||||     
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaa-tttcggtcccctaagatttagccca 1858094  T
Q  480 tttgca 485  Q
    ||||||    
T  1858095 tttgca 1858100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 381 - 521
Target Start/End: Complemental strand, 11283310 - 11283171
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||  |||| |||| | |||||  |||||||| |  ||||||| | |||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaatttt-ggtcccctaaaatttagcccct 11283212  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaac 521  Q
    |||||||  || |||||||   ||||||||||  |||||||    
T  11283211 ttgcaattttgatcattttagtcaattttgacaaagtcaac 11283171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 372 - 485
Target Start/End: Complemental strand, 24124005 - 24123896
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    |||||||||||||||||| |||||   ||||| ||||||||||||| ||||||||||| || | || | || |||| ||||||||||| || |||||||     
T  24124005 taaaatttaggctaaagtacactt---cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttag-cctcctaagat 24123910  T
Q  472 ttagcccctttgca 485  Q
    ||||||||||||||    
T  24123909 ttagcccctttgca 24123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 486
Target Start/End: Complemental strand, 29968434 - 29968334
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||| |||| || | ||||||||||||||| | |  ||||||||| |||||||| |||    
T  29968434 taaagtgcacttttccccc-ttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattct-ggtcccctaagatttagccccattg 29968337  T
Q  484 caa 486  Q
    |||    
T  29968336 caa 29968334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 18979220 - 18979139
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||| |||| ||   | ||||||||||||||| |||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggcccc 18979139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 32968448 - 32968509
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||    
T  32968448 aaaaattaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggcccc 32968509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 11456633 - 11456697
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatga 440  Q
    ||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||| |||| |||||    
T  11456633 atttaggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggccccctatga 11456697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 18978029 - 18978123
Alignment:
Q  390 gcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaa 486  Q
    ||||||||||||||| |||||||||||  || |||||||| |||| || | ||||||||||||||||| | |||| ||||| |||||||||||||||    
T  18978029 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt-ggccccttaagatttagcccctttgcaa 18978123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 30568883 - 30568989
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||||||| |||| || || |||||||||||| ||||||||| | | || | |||||||||| |||||| |  ||||||||| |||||    
T  30568883 tttaggctaaagtgcactttccccctct-aagtttcaaaaagttacaattttgatctcttaggtacaaaaactataatttt-gatcccctaagatttagc 30568980  T
Q  477 ccctttgca 485  Q
    |||||||||    
T  30568981 ccctttgca 30568989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 38980146 - 38980062
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 38980062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 39011243 - 39011159
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 39011159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 1824174 - 1824084
Alignment:
Q  386 aagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||| |||||||||  ||||||||||||| |||||||||||  ||| || | ||||||||||||||||| | |||||||||| ||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaatttt-ggccccctaagatttagcc 1824084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 386 - 477
Target Start/End: Complemental strand, 1858619 - 1858529
Alignment:
Q  386 aagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||| |||||||||  ||||||||||||| |||||||||||  ||| || | ||||||||||||||||| | |||||||||| ||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaatttt-ggccccctaagatttagcc 1858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 38974795 - 38974878
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 38974878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 39005893 - 39005976
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 39005976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 656 - 749
Target Start/End: Complemental strand, 24361030 - 24360938
Alignment:
Q  656 tctccttcatcttctccttcattttcttaacagctttattttcttctcaaccaaaatccagaaaat-attacatgaatcttttcaacaacaacaa 749  Q
    |||||||||| |||||| |||||||||||||| ||| || |||||||||||||| | ||||||||| |  ||| |||||||||||||||||||||    
T  24361030 tctccttcat-ttctccgtcattttcttaacaacttcatcttcttctcaaccaaca-ccagaaaataacaacacgaatcttttcaacaacaacaa 24360938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 32207425 - 32207350
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    ||||||||||||||||| |||||  |||| |||||||| ||||||||||||| || || | |||||||||||||||||    
T  32207425 aggctaaagtgcactttcccccc--taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaatttt 32207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 550
Target Start/End: Complemental strand, 2380024 - 2379857
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    ||||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||| |||| ||  ||||||||||||| | |||| ||||| |||||     
T  2380024 ttaggctaaagtttacttttccccc--taactttcaaaaagttgtaattttggcccc-tatgtac-gaaactacaatttt-ggccccttaagatttagct 2379930  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    | ||||||    ||||  ||||   ||||||||||| ||||||| || ||||| ||||||| |||||||||||    
T  2379929 catttgcatctttggttcttttggtcaattttgaccaagtcaacgcttatttgacatgccatgtgtgtaatta 2379857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 36337678 - 36337621
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||| || |||||||||||| | |||| ||||||||||||||||||||||||||    
T  36337678 tttaggcttaaatgcacttttccctctttaagtttcaaaaagttgcaattttgacccc 36337621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 514
Target Start/End: Original strand, 18970920 - 18971042
Alignment:
Q  390 gcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttgcaatag 489  Q
    ||||||||||||||| |||||||||||  || |||||||| |||| || | ||||||||||||||||| | ||||  |||| ||| |||||||||||       
T  18970920 gcacttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt-gacccctgaagatttaacccctttgcaactt 18971017  T
Q  490 tggtcatttttagcaattttgaccg 514  Q
    ||||| |||||  ||||||||||||    
T  18971018 tggtcctttttgccaattttgaccg 18971042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 520
Target Start/End: Complemental strand, 40471244 - 40471110
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    ||||||||||||||||||| |||||||| ||||| || ||||||||   |||||   ||||||||||||||||||| |||| ||||| ||| || |||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttg-gtccataaatacaaaaactacaattttag-ccccttaagatttaacctctttg 40471147  T
Q  484 caatagtggtcatttttagcaattttgaccgagtcaa 520  Q
     |    ||||||||||   ||||||||||||||||||    
T  40471146 tatctttggtcattttggtcaattttgaccgagtcaa 40471110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 7117428 - 7117366
Alignment:
Q  370 tataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacc 432  Q
    |||||| ||||||||||| ||||||| || || ||||| |||||||||||||| |||||||||    
T  7117428 tataaattttaggctaaactgcacttatcaccacttaagtttcaaaaagttgcgattttgacc 7117366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 11288963 - 11288914
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaatttt 428  Q
    ||||||||||||||||||| | ||| ||||||||||||| ||||||||||    
T  11288963 taggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 24483143 - 24483196
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||||||| | ||| ||||||||| ||||||||||| ||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 32974037 - 32973984
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    ||||||||||||||||| ||||| |||||||||||| ||||| |||||| ||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggcccc 32973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 45114618 - 45114569
Alignment:
Q  380 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||| |||||||||||||| ||| ||||||||||||| |||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttg 45114569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 2379321 - 2379416
Alignment:
Q  667 ttctccttcattttcttaacagctttattttcttctcaacc--------aaaatccagaaaatattacatgaatcttttcaacaacaacaacaatct 755  Q
    ||||||||||||||||||||| ||| || ||||||||||||        ||||| | |||||||  |||| ||||||||||||||||||||||||||    
T  2379321 ttctccttcattttcttaacaacttcatcttcttctcaaccaacactaaaaaattctgaaaataaaacat-aatcttttcaacaacaacaacaatct 2379416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 34625303 - 34625218
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc--atatgaacaaaaactacaattttagccccc 464  Q
    |||||| ||||||||||  |||  ||| ||| ||||||||||||||||   | |  ||||||||||||||||||||||||||||||    
T  34625303 ggctaaggtgcacttttatccctctaagtttgaaaaagttgcaattttagtctcttatatgaacaaaaactacaattttagccccc 34625218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 462 - 512
Target Start/End: Original strand, 45112949 - 45112999
Alignment:
Q  462 cccctaagaattagcccctttgcaatagtggtcatttttagcaattttgac 512  Q
    ||||||||||||||||||||||||||  || || |||||| ||||||||||    
T  45112949 cccctaagaattagcccctttgcaattttgatcttttttatcaattttgac 45112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||| ||||||||| |||| |||||||| |||||||||||| ||||    
T  3819489 ggctaaagtgcatttttccccc-ttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 30336602 - 30336525
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttta 458  Q
    ||||||||||||||| | ||||| ||||||||||||| ||  ||||||  || | || | ||||||||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttta 30336525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 30570353 - 30570254
Alignment:
Q  384 taaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctttg 483  Q
    |||||||||| ||| ||||  ||| ||| ||||||||||||||||||  || |||| ||||||| || |||||| | |||||||||| ||||||| ||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttga-tccttatgtacaaaaattagaatttt-ggccccctaagatttagcccttttg 30570256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 36250959 - 36250906
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgacc 432  Q
    ||||||||||| ||||||| | ||||||| ||| ||||||||| ||||||||||    
T  36250959 taggctaaagtacactttttctcccttaagttttaaaaagttgtaattttgacc 36250906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 379 - 556
Target Start/End: Original strand, 1437 - 1613
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    |||||||||||| |||||||||||  ||||||| ||||| |||||||||||||||| |||| | |||||||| |||||| | |||||||||| |||||||    
T  1437 taggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataatttt-gaccccctaagatttagccc 1535  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
     ||||||    ||||| ||||   ||||||||||| ||||||  ||||||||||||||||| |||||||||| |||||    
T  1536 atttgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacatgtgtaattaaccatt 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 69; Significance: 2e-30; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 378 - 514
Target Start/End: Original strand, 17467 - 17602
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||| || | ||||||||||||||||| ||||||| |||||||| ||    
T  17467 ttaggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggcccccc-aagaattatcc 17565  T
Q  478 cctttgcaatagtggtcatttttagcaattttgaccg 514  Q
    ||||||||||   | || |||||| ||||||||||||    
T  17566 cctttgcaatttcgatcttttttaccaattttgaccg 17602  T

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Target: scaffold0302; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 18877 - 18795
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    ||||||||||||||||| ||| | ||||||| ||||| |||||||||||  ||| || | |||||||||| |||||| |||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggcccc 18795  T

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Target: scaffold0632 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 377 - 486
Target Start/End: Complemental strand, 3412 - 3305
Alignment:
Q  377 tttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagc 476  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| | |||||||||| |||||| |  ||||||||| |||||    
T  3412 tttaggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataatttt-ggtcccctaagatttagc 3315  T
Q  477 ccctttgcaa 486  Q
    ||||||||||    
T  3314 ccctttgcaa 3305  T

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Target: scaffold0294 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 378 - 479
Target Start/End: Complemental strand, 5542 - 5442
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcc 477  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| || | ||||||||||||||||| |||||| ||||| ||||||    
T  5542 ttaggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaatttt-gcccccttaagatttagcc 5444  T
Q  478 cc 479  Q
    ||    
T  5443 cc 5442  T

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Target: scaffold0294; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 520
Target Start/End: Original strand, 4440 - 4580
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagccc 478  Q
    ||||||||||||||| ||| ||||| ||| ||||||||| || |||||||  |||| || | ||||||| |||||||||| ||||||||| | |||||||    
T  4440 taggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaatttta-cccccctaaaatttagccc 4538  T
Q  479 ctttgcaatagtggtcatttttagcaattttgaccgagtcaa 520  Q
    | || |||   ||||||||||   | ||||||||| ||||||    
T  4539 cattacaaatttggtcattttggtcgattttgaccaagtcaa 4580  T

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Target: scaffold0019 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 381 - 550
Target Start/End: Original strand, 60090 - 60258
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccct 480  Q
    ||||||||||||||||||| ||  ||||||| ||||| |||||||||||||||| |||| | ||||||||||||||| | ||||||| || |||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaatttt-gaccccctatgatttagcccct 60188  T
Q  481 ttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    |||||    ||||| ||||   ||||||||||| ||||||  ||||||   ||||||||| |||||||||    
T  60189 ttgcatctttggtctttttggtcaattttgaccaagtcaatgctgattgaacatgccacgcgtgtaatta 60258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 382 - 550
Target Start/End: Complemental strand, 61559 - 61392
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccctt 481  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||  |||| || | |||||||||| |||||| | ||||||| || ||||||| ||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataatttt-ggccccctatgatttagcccttt 61461  T
Q  482 tgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 550  Q
    ||||    ||||| ||||   ||||||||||| ||||||  |||| | | ||||||||  |||||||||    
T  61460 tgcatctttggtccttttggtcaattttgaccaagtcaatgctgactggacatgccacacgtgtaatta 61392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 372 - 485
Target Start/End: Original strand, 19479 - 19591
Alignment:
Q  372 taaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaa 471  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||| |||| || | | ||||||||||||||| |  |||||||||     
T  19479 taaaatttaggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaatttt-gatcccctaagat 19577  T
Q  472 ttagcccctttgca 485  Q
    ||| ||||||||||    
T  19578 ttaacccctttgca 19591  T

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Target: scaffold0049 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 371 - 486
Target Start/End: Complemental strand, 7526 - 7412
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    |||||||  |||||||||||||||| ||||||  ||| ||| |||||||| | ||||||||||| |||| ||| ||||||||||||| | ||||||||||    
T  7526 ataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaatttt-gaccccctaaga 7428  T
Q  471 attagcccctttgcaa 486  Q
     |||||||||||||||    
T  7427 tttagcccctttgcaa 7412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 381 - 460
Target Start/End: Original strand, 7538 - 7616
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagc 460  Q
    |||||||||||||||| |||||  ||| ||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  7538 ggctaaagtgcacttt-ccccctataagtttgaaaaagttgtaaatttgaccccctatgaacaaaaactacaattttagc 7616  T

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Target: scaffold0586 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 376 - 477
Target Start/End: Original strand, 6338 - 6438
Alignment:
Q  376 atttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattag 475  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||| | |||||  |||| |||| ||||||||||||||||| | |||||||||| ||||    
T  6338 atttaggttaaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaatttt-gaccccctaagatttag 6436  T
Q  476 cc 477  Q
    ||    
T  6437 cc 6438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 379 - 463
Target Start/End: Complemental strand, 9128 - 9045
Alignment:
Q  379 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccc 463  Q
    ||||||||||||||||||| || |||||| |||||||||||||  |||||  || | |||| ||||||||||||||||| |||||    
T  9128 taggctaaagtgcactttttcctccttaa-tttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggcccc 9045  T

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Target: scaffold0227 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 226 - 137
Alignment:
Q  375 aatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||  ||| |  ||||| |||||||| ||||||    
T  226 aattttggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 137  T

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Target: scaffold0369 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 371 - 457
Target Start/End: Original strand, 13183 - 13267
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaatttt 457  Q
    |||||||  |||||||||||||||||||||||  ||||||| |||||||||  ||||||||| | |||| || ||||||||||||||    
T  13183 ataaaataaaggctaaagtgcacttttccccc--taactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttt 13267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 486
Target Start/End: Original strand, 23071 - 23183
Alignment:
Q  371 ataaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatgaacaaaaactacaattttagcccccctaaga 470  Q
    ||||| ||| ||||||||||||||||||||||  ||||||||||||| ||||||||||| |||  || | || ||||| ||||| || || ||||||||     
T  23071 ataaatttttggctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatctt-gctcccctaagc 23167  T
Q  471 attagcccctttgcaa 486  Q
     |||||||| ||||||    
T  23168 tttagccccattgcaa 23183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 23999 - 23943
Alignment:
Q  373 aaaatttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    |||||||||||||||||||||||||  | || ||||||||||||| |||||||||||    
T  23999 aaaatttaggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttg 23943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 2564 - 2483
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaag-ttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||| || | |||||||| || ||||| ||||||    
T  2564 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccc 2483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 7187 - 7106
Alignment:
Q  382 gctaaagtgcacttttccccccttaactttcaaaaag-ttgcaattttgaccccatatgaacaaaaactacaattttagccccc 464  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||| || | |||||||| || ||||| ||||||    
T  7187 gctaaagtgcacttttccccc--taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccc 7106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 381 - 533
Target Start/End: Original strand, 37148 - 37298
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagtt-gcaattttgaccccatatgaacaaaaactacaattttagcccccctaagaattagcccc 479  Q
    ||||||||||||||||||||||  || |||| ||||| || |||||||||||||| || | |||||||| |||||||| | ||||||| || ||||||||    
T  37148 ggctaaagtgcacttttccccc--tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaatttt-ggccccctacgatttagcccc 37244  T
Q  480 tttgcaatagtggtcatttttagcaattttgaccgagtcaacactgatttggca 533  Q
     ||| ||   |  |||||||   ||||||||||| |||||||  ||||||||||    
T  37245 attgaaaatttcatcattttggtcaattttgacctagtcaacgatgatttggca 37298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000006; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 49185 - 49137
Alignment:
Q  381 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttg 429  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttg 49137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 49038 - 49000
Alignment:
Q  518 caacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  49038 caacacttatttggcatgccacgtgtgtaattaaccatt 49000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 48427 - 48480
Alignment:
Q  503 caattttgaccgagtcaacactgatttggcatgccacgtgtgtaattagccatt 556  Q
    ||||||||||| ||||||   |||||| |||||||||||||||||||| |||||    
T  48427 caattttgaccaagtcaatgttgatttagcatgccacgtgtgtaattaaccatt 48480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000009; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 15740 - 15706
Alignment:
Q  400 ccccttaactttcaaaaagttgcaattttgacccc 434  Q
    |||||||||||| ||||||||||||||||||||||    
T  15740 ccccttaacttttaaaaagttgcaattttgacccc 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 454926 - 454987
Alignment:
Q  378 ttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttgaccccatatg 439  Q
    ||||||||||||||||||||| ||| |||| ||| |||||||||  |||||| |||| ||||    
T  454926 ttaggctaaagtgcacttttcacccattaagttttaaaaagttgtgattttggccccctatg 454987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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