View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9246_low_11 (Length: 558)
Name: NF9246_low_11
Description: NF9246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9246_low_11 |
 |  |
|
| [»] scaffold0070 (4 HSPs) |
 |  |  |
|
| [»] scaffold1335 (1 HSPs) |
 |  |  |
|
| [»] scaffold0590 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 15 - 320
Target Start/End: Complemental strand, 25390118 - 25389825
Alignment:
| Q |
15 |
agagggagcaggaacaacagcccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtcttgtatttaaa |
114 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25390118 |
agagggagcaggaacaacaacccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtctt--------- |
25390028 |
T |
 |
| Q |
115 |
ttttgtggcaaataggttttttgtcaaataggttgttaacttacacattcatgattttgaattggtgtaaattagctgccgttaagagaatgactatttc |
214 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25390027 |
-tttgt--caaataggttttttgtcaaataggttgttaacttacacattcatgattttgaattggtgtaaattagctgccgttaagagaatgactatttc |
25389931 |
T |
 |
| Q |
215 |
tatttctttaaagggtgctttgatttcatattagcttgctttttacttacttgacttacaaattacatgatctaccaaaggagagttttacatagataat |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25389930 |
tatttctttaaagggtgctttgatttcatattagcttgctttttacttacttgacttacaaattacatgatctaccaaaggagagttttacatagataat |
25389831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 25344634 - 25344498
Alignment:
| Q |
35 |
cccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtcttgtatttaaattttgtggcaaataggtttt |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25344634 |
cccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtcttgtatttaaattttgtgtcaaataggtttt |
25344535 |
T |
 |
| Q |
135 |
ttgtcaaataggttgttaacttacacattcatgattt |
171 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25344534 |
ttgtcaaataggttgttaacttacacattcatgattt |
25344498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 216 - 471
Target Start/End: Complemental strand, 25344501 - 25344230
Alignment:
| Q |
216 |
atttctttaaagggtgctttgatttcatattagcttgctttttacttacttgacttacaaattacatgatctacc---------------aaaggagagt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
25344501 |
atttctttaaagggtgctttgatttcatattagcttgctttttacttacttgacttacaaattacatgatctacccatttaataagctccaaaggagagt |
25344402 |
T |
 |
| Q |
301 |
tttacatagataatattctacacatttctcttgttnnnnnnnnnnnnnn-ttctacacattactggtgagagttaacatttaatactatatccttatgtt |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
25344401 |
tttacatagataatattctacacatttctcttgttaaaaaaaataaaaaattctacacatttctggtgagagttaacatttaatactatgtccttatgtt |
25344302 |
T |
 |
| Q |
400 |
aattaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaatgta |
471 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| ||| ||||||| ||||| ||| |||||| |||||||| |
|
|
| T |
25344301 |
aattagcggtgtaagcggttcggataaaaccaataaaattgaaagttcaaattgaatcaaaccaaaaatgta |
25344230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 25676425 - 25676333
Alignment:
| Q |
15 |
agagggagcaggaacaacagcccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtcttgt |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25676425 |
agagggagcaggaacaacaacccacgaaaaggggaatttaaaaacatgatattttttaaattaattaaagtaaacttacaaaactagtcttgt |
25676333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 471 - 539
Target Start/End: Complemental strand, 25344154 - 25344086
Alignment:
| Q |
471 |
aacaaatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
25344154 |
aacagatgaatctaaccgatgctaacctcactcctcattttactactattatccctcttcacacacaca |
25344086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 476 - 538
Target Start/End: Complemental strand, 25456149 - 25456087
Alignment:
| Q |
476 |
atgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25456149 |
atgaatcgaactgatgctaacctcactccccattttactattattatccctcttcacacacac |
25456087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 476 - 538
Target Start/End: Complemental strand, 25808302 - 25808240
Alignment:
| Q |
476 |
atgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
25808302 |
atgaatcgaaccgatgctaacctcactcctcattttaatattattatccctcttcacacacac |
25808240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 484 - 537
Target Start/End: Complemental strand, 16570871 - 16570818
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacaca |
537 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
16570871 |
aaccgatgctaacttcactccccattttagtattattatccctcctcacacaca |
16570818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 3767665 - 3767611
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
3767665 |
aaccgatgctaacctcactccccattttagtaatattatcccttctcacacacac |
3767611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 538
Target Start/End: Original strand, 9040593 - 9040643
Alignment:
| Q |
488 |
gatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
9040593 |
gatgctaaccccacttcccattttactattattatccctcctcacacacac |
9040643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 9505193 - 9505248
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
||||||||| ||||||||||||||||||| || |||||||| || ||||||||||| |
|
|
| T |
9505193 |
aaccgatgccaacctcactccccattttagtaatattatccttcctcacacacaca |
9505248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 455
Target Start/End: Original strand, 9040427 - 9040479
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaa |
455 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
9040427 |
taggggtataagcggttcggataaaaccgatgaaatcgaaagtccaaaccgaa |
9040479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Complemental strand, 17722596 - 17722549
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaa |
450 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17722596 |
taggggtgtaaatggttcggataaaaccaatgaaaccgaaagtccaaa |
17722549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 538
Target Start/End: Complemental strand, 20860420 - 20860361
Alignment:
| Q |
479 |
aatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||| |||||||||||| |||||||| ||||||| || ||||||| ||| |||||||||| |
|
|
| T |
20860420 |
aatcaaaccgatgctaatctcactcctcattttagtaatattatcactcctcacacacac |
20860361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 32321976 - 32322030
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||| ||||||||||||||| |||||||| || ||||||| ||| |||||||||| |
|
|
| T |
32321976 |
aaccaatgctaacctcactctccattttagtaatattatctctcctcacacacac |
32322030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 7956516 - 7956464
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaa |
455 |
Q |
| |
|
||||||| |||| |||||||| |||||||| ||||| ||||||||||| |||| |
|
|
| T |
7956516 |
taggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaa |
7956464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 44223503 - 44223451
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaa |
455 |
Q |
| |
|
||||||| |||| |||||||| |||||||| ||||| ||||||||||| |||| |
|
|
| T |
44223503 |
taggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaa |
44223451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 61; Significance: 6e-26; HSPs: 4)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 399 - 471
Target Start/End: Original strand, 33725 - 33797
Alignment:
| Q |
399 |
taattaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaatgta |
471 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33725 |
taattaggggtgtaagtggttcggataaaaccaatgaaactgaaagtccaaattgaaccaaaccgaaaatgta |
33797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 13915 - 13977
Alignment:
| Q |
476 |
atgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13915 |
atgaatcgaaccgatgctaacctcactccccattttactattattatacctcttcacacacac |
13977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 471 - 539
Target Start/End: Original strand, 33873 - 33941
Alignment:
| Q |
471 |
aacaaatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
|||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
33873 |
aacagatgaatctaactgatggtaacctcactccccattttactattattatccctcttcaaacacaca |
33941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 13752 - 13803
Alignment:
| Q |
399 |
taattaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaa |
450 |
Q |
| |
|
||||||||||| ||||||||||||| |||| |||||||||| |||||||||| |
|
|
| T |
13752 |
taattaggggtgtaagcggttcggacaaaatcaatgaaactaaaagtccaaa |
13803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 11503335 - 11503280
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11503335 |
aacccatgctaacctcactccccattttactattattatccctcctcacacacaca |
11503280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 11503512 - 11503444
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaatgta |
471 |
Q |
| |
|
||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
11503512 |
taggggtgtaagcggttaagataaaaccgatgaaactgaaagtccaaaccgaaccaaaccaaaaatgta |
11503444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 538
Target Start/End: Original strand, 46892754 - 46892817
Alignment:
| Q |
475 |
aatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||| | ||||||||||||||||||||| ||||||| || ||||||||||| |||||||||| |
|
|
| T |
46892754 |
aatgaaccaaaccgatgctaacctcactcctcattttagtaatattatccctcatcacacacac |
46892817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 23659561 - 23659616
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
||||||||||||| |||||| |||||||| || ||||||||||| ||||||||||| |
|
|
| T |
23659561 |
aaccgatgctaacatcactctccattttagtaatattatccctcctcacacacaca |
23659616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 471
Target Start/End: Original strand, 44471020 - 44471085
Alignment:
| Q |
406 |
gggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaatgta |
471 |
Q |
| |
|
|||| |||| |||||||| |||||| |||||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
44471020 |
gggtgtaagtggttcggacaaaaccgatgaaatcgaaaatccaaaccgaaccaaaccgaaaatgta |
44471085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 536
Target Start/End: Original strand, 27524194 - 27524246
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
|||| ||| ||||| ||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
27524194 |
aaccaatggtaaccccactccccattttactattattatctctcctcacacac |
27524246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 35847300 - 35847356
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacacat |
540 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||||| ||| || ||||||||| |
|
|
| T |
35847300 |
aaccgatgctaacctcactctccattttattaatattatctctcatctcacacacat |
35847356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 527
Target Start/End: Complemental strand, 33231519 - 33231476
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctc |
527 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||| |||| |
|
|
| T |
33231519 |
aaccgatgctaacctcactccccattttagtaatattatacctc |
33231476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 26918459 - 26918399
Alignment:
| Q |
476 |
atgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
||||||| ||| |||||||||| |||||| |||||| || ||||||||||| |||||||| |
|
|
| T |
26918459 |
atgaatcgaactgatgctaaccctactccctattttagtaatattatccctcctcacacac |
26918399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 3997130 - 3997066
Alignment:
| Q |
401 |
attaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaa |
465 |
Q |
| |
|
||||||||| |||| |||||||| |||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
3997130 |
attaggggtgtaagtggttcggacaaaaccaatgaaaccgaaagtccaaaccgtaccaaaccgaa |
3997066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 2197679 - 2197625
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||| || || ||||||| |
|
|
| T |
2197679 |
aaccgatgctaacttcactccccattttactaatattatccttcctcgcacacac |
2197625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 25545225 - 25545176
Alignment:
| Q |
475 |
aatgaatctaaccgatgctaacctcactccccattttactattattatcc |
524 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
25545225 |
aatgaatcgaaccaatgctaacctcactccccattttagtaatattatcc |
25545176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 12470228 - 12470180
Alignment:
| Q |
488 |
gatgctaacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
|||||||| |||| ||||||||||| || |||||||||||||||||||| |
|
|
| T |
12470228 |
gatgctaatctcagtccccattttagtaatattatccctcttcacacac |
12470180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 32971401 - 32971456
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||||| ||||||||||| |
|
|
| T |
32971401 |
aaccgatgctaacctcactctccatttttgaaatattatccctcctcacacacaca |
32971456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 536
Target Start/End: Complemental strand, 35738133 - 35738090
Alignment:
| Q |
493 |
taacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
35738133 |
taaccccactccccattttactaatattatccctcatcacacac |
35738090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 12471740 - 12471690
Alignment:
| Q |
487 |
cgatgctaacctcactccccattttactattattatccctcttcacacaca |
537 |
Q |
| |
|
||||| |||||||||||| ||||||| || ||||||||||||||| ||||| |
|
|
| T |
12471740 |
cgatgttaacctcactcctcattttagtaatattatccctcttcatacaca |
12471690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 48070791 - 48070845
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||||| ||||||||||| |||||| | || || ||||||||||||||||||| |
|
|
| T |
48070791 |
aaccgatgttaacctcactcaccatttcagtaataatatccctcttcacacacac |
48070845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 7352556 - 7352491
Alignment:
| Q |
402 |
ttaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
|||||||| ||| ||||| || |||||||| ||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
7352556 |
ttaggggtgtaattggttcagacaaaaccaacgaaaccgaaagtccaaatcaaaccgaaccgaaaa |
7352491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 12471911 - 12471855
Alignment:
| Q |
411 |
taagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||| |||||| ||||| |||| ||||| |
|
|
| T |
12471911 |
taagtggttcggataaaaccgatgaaattgaaaatccaaaccgaacaaaactgaaaa |
12471855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 536
Target Start/End: Complemental strand, 27226920 - 27226868
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||| ||||||||||| | |||||| |
|
|
| T |
27226920 |
aaccgatggtaatctcactctccattttactaatattatccctcctaacacac |
27226868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 538
Target Start/End: Original strand, 5526380 - 5526447
Alignment:
| Q |
471 |
aacaaatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||| ||||| | |||||||||||| |||||||||||||||| |||||||||||||| | |||||||| |
|
|
| T |
5526380 |
aacagatgaaccgaaccgatgctaatctcactccccattttagtattattatccctccttacacacac |
5526447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 3690114 - 3690059
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
||||||||||||||| ||||||||||||| || ||||||||||| || |||||||| |
|
|
| T |
3690114 |
aaccgatgctaaccttactccccattttagtaatattatccctcctcgcacacaca |
3690059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 29109348 - 29109284
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
||||||| |||| |||||||| ||||| |||||||||||| |||||| |||||||||| ||||| |
|
|
| T |
29109348 |
taggggtgtaagtggttcggacaaaactgatgaaactgaaaatccaaaccgaaccaaactgaaaa |
29109284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 33037043 - 33036993
Alignment:
| Q |
487 |
cgatgctaacctcactccccattttactattattatccctcttcacacaca |
537 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| ||||||||| |
|
|
| T |
33037043 |
cgatgctaacttcactctccattttagtaatattatccctcctcacacaca |
33036993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 37630511 - 37630559
Alignment:
| Q |
488 |
gatgctaacctcactccccattttactattattatccctcttcacacac |
536 |
Q |
| |
|
||||||||| |||||||||| |||| || ||||||||||| |||||||| |
|
|
| T |
37630511 |
gatgctaacatcactccccactttagtaatattatccctcctcacacac |
37630559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 53393164 - 53393110
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||||||||| |||||||| || |||||||||||||||||||||| |
|
|
| T |
53393164 |
aaccgatgctaacctcactttccattttagtaatattatccctcttcacacacac |
53393110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 8056888 - 8056943
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacaca |
539 |
Q |
| |
|
||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
8056888 |
aaccgatcctaaccccactccccattttactaatattatccttcctcacacacaca |
8056943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 23108097 - 23108039
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaac |
461 |
Q |
| |
|
||||||| |||| |||||||| |||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
23108097 |
taggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaccaaac |
23108039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 42141417 - 42141471
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||||||||| |||||||| ||||||| || |||||| |||| |||||||||| |
|
|
| T |
42141417 |
aaccgatgctaaactcactcctcattttagtaatattatacctcctcacacacac |
42141471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 8606150 - 8606110
Alignment:
| Q |
475 |
aatgaatctaaccgatgctaacctcactccccattttacta |
515 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||||||||||| |
|
|
| T |
8606150 |
aatgaatcgaaccgatggtaaccacactccccattttacta |
8606110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 53393333 - 53393277
Alignment:
| Q |
411 |
taagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
|||| |||||||| |||||| ||||||| |||| |||||| ||||||||||| |||| |
|
|
| T |
53393333 |
taagtggttcggacaaaaccgatgaaaccgaaaatccaaaccgaaccaaaccaaaaa |
53393277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 538
Target Start/End: Complemental strand, 32678473 - 32678411
Alignment:
| Q |
476 |
atgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||| || ||||||||||| | |||||||| |
|
|
| T |
32678473 |
atgaatcgaactgatgctaacctcactccccattttagtaatattatccctcataacacacac |
32678411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 16585050 - 16584986
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
||||||| |||| |||||||| |||||||| ||||| ||||||||||| ||||||||| |||||| |
|
|
| T |
16585050 |
taggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaccaaaacgaaaa |
16584986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 17530781 - 17530835
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||| |||||| |||||||| || |||||||| ||||||||||||| |
|
|
| T |
17530781 |
aaccgatgctaacttcactctccattttagtaatattatccttcttcacacacac |
17530835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 42010155 - 42010091
Alignment:
| Q |
403 |
taggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
||||||| |||||||||||||| ||||||| ||||| || |||||||| | ||||||||||||| |
|
|
| T |
42010155 |
taggggtgtaagcggttcggattaaaccaacgaaaccgatagtccaaactggaccaaaccgaaaa |
42010091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 8414765 - 8414700
Alignment:
| Q |
402 |
ttaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
|||||| | |||| |||||||| |||||| |||||||||||| |||||| |||| |||||||||| |
|
|
| T |
8414765 |
ttagggatgtaagtggttcggacaaaaccgatgaaactgaaaatccaaactgaacaaaaccgaaaa |
8414700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 538
Target Start/End: Original strand, 11971578 - 11971641
Alignment:
| Q |
475 |
aatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||| | ||| ||||||| ||||||||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
11971578 |
aatgaaccaaactgatgctatcctcactccccattttagtaatattatccctcctcacacacac |
11971641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 538
Target Start/End: Original strand, 11846421 - 11846471
Alignment:
| Q |
488 |
gatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
11846421 |
gatgctatcctcactccccattttagtaatattatccctcctcacacacac |
11846471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 538
Target Start/End: Complemental strand, 7176505 - 7176442
Alignment:
| Q |
475 |
aatgaatctaaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
|||||| | ||| ||||||||||||||||||||||||| || ||||||| ||| ||||| |||| |
|
|
| T |
7176505 |
aatgaaccgaacagatgctaacctcactccccattttagtaatattatctctcctcacaaacac |
7176442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 527
Target Start/End: Original strand, 20722413 - 20722456
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctc |
527 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
20722413 |
aaccgatgctaaccccactccccattttactaacattatccctc |
20722456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 23300594 - 23300648
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||| |||||| |||||||| || ||||||||||| ||| |||||| |
|
|
| T |
23300594 |
aaccgatgctaacttcactctccattttagtaatattatccctcctcatacacac |
23300648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1335 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1335
Description:
Target: scaffold1335; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 963 - 907
Alignment:
| Q |
484 |
aaccgatgctaacctcactccccattttactattattatccctcttcacacacacat |
540 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||||| ||| || ||||||||| |
|
|
| T |
963 |
aaccgatgctaacctcactctccattttattaatattatctctcatctcacacacat |
907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 31895892 - 31895960
Alignment:
| Q |
399 |
taattaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
||||||||||| |||| |||||||| |||||||| ||| ||||||||||| ||||||||||||||| |
|
|
| T |
31895892 |
taattaggggtgtaagtggttcggacaaaaccaacaaaatcgaaagtccaaactgaaccaaaccgaaaa |
31895960 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 6829495 - 6829529
Alignment:
| Q |
66 |
ttttttaaattaattaaagtaaacttacaaaacta |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6829495 |
ttttttaaattaattaaaggaaacttacaaaacta |
6829529 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 7239293 - 7239239
Alignment:
| Q |
479 |
aatctaaccgatgctaacctcactccccattttactattattatccctcttcaca |
533 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| || ||||||| ||| ||||| |
|
|
| T |
7239293 |
aatcgaaccgatgctaacctcacttcccattttagtaatattatctctcctcaca |
7239239 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 7244469 - 7244415
Alignment:
| Q |
479 |
aatctaaccgatgctaacctcactccccattttactattattatccctcttcaca |
533 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| || ||||||| ||| ||||| |
|
|
| T |
7244469 |
aatcgaaccgatgctaacctcacttcccattttagtaatattatctctcctcaca |
7244415 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 19947706 - 19947772
Alignment:
| Q |
401 |
attaggggtttaagcggttcggataaaaccaatgaaactgaaagtccaaatcgaaccaaaccgaaaa |
467 |
Q |
| |
|
|||| |||| |||| |||||||| |||| ||| ||| | ||||||||||| |||||||||||||||| |
|
|
| T |
19947706 |
attacgggtgtaagtggttcggacaaaatcaacgaatccgaaagtccaaaccgaaccaaaccgaaaa |
19947772 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0590 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0590
Description:
Target: scaffold0590; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 538
Target Start/End: Original strand, 8350 - 8398
Alignment:
| Q |
490 |
tgctaacctcactccccattttactattattatccctcttcacacacac |
538 |
Q |
| |
|
||||||||||||||| |||||| || ||||||||||| |||||||||| |
|
|
| T |
8350 |
tgctaacctcactccgcattttggtaatattatccctcctcacacacac |
8398 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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