View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9246_low_43 (Length: 201)
Name: NF9246_low_43
Description: NF9246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9246_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 2427181 - 2427009
Alignment:
| Q |
13 |
cacagattttggaacaactacagatttcgatacattgggaaacaatgaagaagaaaatgtagaagatttggactttaaggatgaggaaagcatagaaagt |
112 |
Q |
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| T |
2427181 |
cacagattttggaacaactacagatttcgatacattgggaaacaatgaagaagaaaatgtagaagatttggactttaaggatgaggagagcatagaaagt |
2427082 |
T |
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| Q |
113 |
ttggattttggttatgagccggatgattttggcgaagaagacgaagatataatgaatgagcttggaaaattag |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2427081 |
ttggattttggttatgagccggatgattttggcgaagaagacgaagatataatgaatgagcttggaaaattag |
2427009 |
T |
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