View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9247_low_10 (Length: 517)

Name: NF9247_low_10
Description: NF9247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9247_low_10
NF9247_low_10
[»] chr8 (28 HSPs)
chr8 (11-497)||(19784994-19785502)
chr8 (38-158)||(30117899-30118017)
chr8 (34-160)||(24381563-24381689)
chr8 (17-121)||(14271614-14271719)
chr8 (39-151)||(24380595-24380707)
chr8 (17-119)||(22501609-22501712)
chr8 (52-158)||(7984851-7984957)
chr8 (41-115)||(15176676-15176750)
chr8 (39-116)||(15058745-15058822)
chr8 (51-184)||(24518841-24518974)
chr8 (17-143)||(2638470-2638597)
chr8 (40-121)||(6886442-6886523)
chr8 (39-160)||(30487580-30487701)
chr8 (41-89)||(13313492-13313540)
chr8 (31-158)||(24091551-24091678)
chr8 (41-160)||(24851178-24851296)
chr8 (41-100)||(28858630-28858689)
chr8 (49-122)||(17100450-17100523)
chr8 (41-122)||(37527268-37527349)
chr8 (52-88)||(4007407-4007443)
chr8 (52-160)||(5856515-5856622)
chr8 (52-100)||(19791188-19791236)
chr8 (44-84)||(21230735-21230775)
chr8 (41-88)||(23868074-23868121)
chr8 (49-84)||(24091128-24091163)
chr8 (44-114)||(24389536-24389606)
chr8 (51-140)||(14076876-14076965)
chr8 (57-89)||(13833863-13833895)
[»] chr2 (43 HSPs)
chr2 (17-174)||(17891450-17891608)
chr2 (40-160)||(27420806-27420926)
chr2 (39-122)||(11464557-11464640)
chr2 (41-122)||(28930045-28930126)
chr2 (323-402)||(9962102-9962182)
chr2 (31-158)||(25883575-25883702)
chr2 (71-158)||(45572641-45572727)
chr2 (71-158)||(45576308-45576394)
chr2 (71-158)||(45579975-45580061)
chr2 (71-158)||(45583642-45583728)
chr2 (71-158)||(45587309-45587395)
chr2 (71-158)||(45590976-45591062)
chr2 (71-158)||(45594643-45594729)
chr2 (71-158)||(45598310-45598396)
chr2 (71-158)||(45601977-45602063)
chr2 (71-158)||(45605644-45605730)
chr2 (71-158)||(45609311-45609397)
chr2 (71-158)||(45612978-45613064)
chr2 (71-158)||(45616645-45616731)
chr2 (55-158)||(36191325-36191428)
chr2 (39-115)||(22378071-22378147)
chr2 (41-88)||(21905531-21905578)
chr2 (52-122)||(29834638-29834708)
chr2 (39-109)||(34580016-34580086)
chr2 (39-109)||(34585765-34585835)
chr2 (17-121)||(18553070-18553175)
chr2 (40-121)||(24346309-24346390)
chr2 (41-122)||(28766635-28766716)
chr2 (52-160)||(22627120-22627228)
chr2 (55-127)||(32086794-32086866)
chr2 (50-112)||(18120801-18120863)
chr2 (41-103)||(27907767-27907829)
chr2 (41-86)||(29144441-29144486)
chr2 (41-89)||(18758105-18758153)
chr2 (45-121)||(32438928-32439004)
chr2 (34-121)||(19198714-19198800)
chr2 (31-86)||(23010278-23010333)
chr2 (39-118)||(29850795-29850874)
chr2 (39-88)||(20175618-20175667)
chr2 (41-113)||(17674235-17674306)
chr2 (52-84)||(25537368-25537400)
chr2 (37-81)||(26651875-26651919)
chr2 (31-127)||(29032648-29032744)
[»] chr7 (50 HSPs)
chr7 (35-158)||(15171001-15171124)
chr7 (17-160)||(144709-144854)
chr7 (37-163)||(9501743-9501869)
chr7 (313-401)||(9260103-9260192)
chr7 (313-401)||(9310102-9310191)
chr7 (41-117)||(24751441-24751517)
chr7 (31-158)||(1588973-1589100)
chr7 (421-503)||(20931544-20931626)
chr7 (52-160)||(21233837-21233945)
chr7 (17-174)||(3736057-3736216)
chr7 (17-127)||(8309956-8310067)
chr7 (31-158)||(9767520-9767647)
chr7 (17-158)||(10418292-10418435)
chr7 (41-167)||(20175821-20175947)
chr7 (329-402)||(20931473-20931547)
chr7 (41-121)||(9917939-9918020)
chr7 (41-121)||(9925851-9925932)
chr7 (40-121)||(13281971-13282052)
chr7 (17-160)||(7399072-7399215)
chr7 (52-119)||(8317335-8317402)
chr7 (39-122)||(10585428-10585511)
chr7 (41-160)||(15611282-15611401)
chr7 (31-142)||(19154588-19154699)
chr7 (31-142)||(20753987-20754098)
chr7 (41-115)||(25692567-25692641)
chr7 (52-121)||(21428569-21428638)
chr7 (37-160)||(6039537-6039660)
chr7 (41-115)||(3585768-3585842)
chr7 (41-110)||(10611495-10611564)
chr7 (41-114)||(11804478-11804551)
chr7 (313-394)||(20466416-20466497)
chr7 (37-160)||(5485360-5485482)
chr7 (51-121)||(1810677-1810747)
chr7 (63-117)||(23897039-23897093)
chr7 (31-83)||(6018168-6018220)
chr7 (41-89)||(26249320-26249368)
chr7 (52-126)||(3134887-3134962)
chr7 (41-88)||(8052674-8052721)
chr7 (39-142)||(9288662-9288764)
chr7 (41-88)||(17831048-17831095)
chr7 (313-402)||(22748815-22748906)
chr7 (53-159)||(5221224-5221330)
chr7 (39-109)||(9298486-9298556)
chr7 (41-103)||(10332195-10332257)
chr7 (41-74)||(1254644-1254677)
chr7 (17-121)||(3189557-3189662)
chr7 (43-84)||(23298162-23298203)
chr7 (41-77)||(4450487-4450522)
chr7 (41-89)||(14968855-14968903)
chr7 (41-89)||(15398331-15398379)
[»] chr4 (34 HSPs)
chr4 (19-159)||(9849929-9850070)
chr4 (18-158)||(25024843-25024983)
chr4 (19-155)||(26114422-26114559)
chr4 (39-159)||(16669963-16670083)
chr4 (45-121)||(17277619-17277695)
chr4 (37-161)||(23083434-23083558)
chr4 (17-143)||(5691506-5691633)
chr4 (22-122)||(22350464-22350563)
chr4 (31-158)||(10236325-10236452)
chr4 (17-121)||(19094019-19094124)
chr4 (41-115)||(8968316-8968390)
chr4 (41-115)||(16928702-16928776)
chr4 (41-142)||(15047525-15047626)
chr4 (41-142)||(15106798-15106899)
chr4 (56-119)||(22345852-22345915)
chr4 (17-102)||(5685430-5685516)
chr4 (313-402)||(15849073-15849163)
chr4 (41-121)||(19883722-19883802)
chr4 (41-88)||(11252372-11252419)
chr4 (51-106)||(22527733-22527788)
chr4 (39-100)||(19927067-19927128)
chr4 (55-115)||(11782258-11782318)
chr4 (41-100)||(9263562-9263621)
chr4 (41-88)||(15166273-15166320)
chr4 (44-115)||(17711084-17711155)
chr4 (41-160)||(18447683-18447802)
chr4 (54-121)||(19547308-19547375)
chr4 (94-160)||(12836304-12836370)
chr4 (17-142)||(20828358-20828483)
chr4 (39-108)||(37741385-37741453)
chr4 (39-76)||(25096118-25096154)
chr4 (41-121)||(10108020-10108100)
chr4 (45-89)||(16714457-16714501)
chr4 (54-122)||(22217250-22217318)
[»] chr3 (29 HSPs)
chr3 (17-158)||(22470624-22470766)
chr3 (17-158)||(18735489-18735631)
chr3 (34-175)||(8448520-8448661)
chr3 (40-141)||(22246750-22246851)
chr3 (31-121)||(20891877-20891967)
chr3 (31-119)||(5509844-5509932)
chr3 (31-114)||(13906817-13906900)
chr3 (31-129)||(3114943-3115041)
chr3 (38-142)||(820086-820190)
chr3 (31-143)||(19388084-19388196)
chr3 (39-158)||(20886605-20886724)
chr3 (31-168)||(17134818-17134954)
chr3 (42-142)||(23054821-23054921)
chr3 (42-122)||(34276685-34276765)
chr3 (39-110)||(3429465-3429536)
chr3 (39-158)||(28326375-28326494)
chr3 (39-122)||(31284538-31284621)
chr3 (39-88)||(11636217-11636265)
chr3 (41-110)||(16242436-16242505)
chr3 (41-142)||(18466941-18467042)
chr3 (41-113)||(18747602-18747673)
chr3 (45-117)||(19912355-19912427)
chr3 (41-121)||(23637386-23637465)
chr3 (49-84)||(18457362-18457397)
chr3 (51-158)||(27853169-27853276)
chr3 (41-115)||(2166280-2166354)
chr3 (31-121)||(16223264-16223354)
chr3 (40-76)||(6075789-6075825)
chr3 (58-126)||(20431238-20431306)
[»] chr5 (32 HSPs)
chr5 (40-160)||(26314955-26315075)
chr5 (20-158)||(17469780-17469918)
chr5 (56-175)||(24261791-24261910)
chr5 (37-167)||(24188615-24188745)
chr5 (17-120)||(18939294-18939398)
chr5 (52-160)||(26122142-26122250)
chr5 (11-160)||(24162224-24162374)
chr5 (31-121)||(24265513-24265603)
chr5 (31-121)||(24342144-24342234)
chr5 (41-121)||(18227385-18227465)
chr5 (19-142)||(18831974-18832098)
chr5 (44-88)||(24658547-24658591)
chr5 (37-160)||(19761820-19761943)
chr5 (53-160)||(23266560-23266667)
chr5 (41-103)||(23338731-23338793)
chr5 (54-167)||(28254628-28254741)
chr5 (41-89)||(23387791-23387839)
chr5 (91-159)||(24849782-24849850)
chr5 (31-143)||(34488607-34488719)
chr5 (51-174)||(26253190-26253313)
chr5 (44-86)||(20860147-20860189)
chr5 (31-81)||(24263985-24264035)
chr5 (31-81)||(24340615-24340665)
chr5 (39-133)||(25572704-25572798)
chr5 (39-109)||(25920617-25920687)
chr5 (44-76)||(19052919-19052951)
chr5 (64-112)||(20532752-20532800)
chr5 (313-394)||(18767859-18767942)
chr5 (41-88)||(28666297-28666344)
chr5 (41-115)||(29987734-29987808)
chr5 (41-74)||(24320768-24320801)
chr5 (41-89)||(23032482-23032530)
[»] chr6 (29 HSPs)
chr6 (31-169)||(23644552-23644690)
chr6 (31-158)||(9898102-9898229)
chr6 (31-143)||(8246377-8246489)
chr6 (17-179)||(22564769-22564928)
chr6 (31-158)||(19246012-19246139)
chr6 (51-121)||(3357915-3357985)
chr6 (41-118)||(22404498-22404575)
chr6 (42-121)||(6629219-6629298)
chr6 (39-122)||(8038293-8038376)
chr6 (313-432)||(16449519-16449644)
chr6 (17-143)||(22569607-22569733)
chr6 (39-173)||(32759690-32759824)
chr6 (54-121)||(10822010-10822077)
chr6 (55-114)||(23005521-23005580)
chr6 (55-114)||(23782786-23782845)
chr6 (58-112)||(21547028-21547082)
chr6 (31-121)||(21687363-21687453)
chr6 (39-100)||(13216548-13216609)
chr6 (43-100)||(17295932-17295989)
chr6 (44-75)||(14639109-14639140)
chr6 (41-88)||(21845942-21845989)
chr6 (39-121)||(2588069-2588150)
chr6 (41-95)||(8066450-8066504)
chr6 (39-112)||(12991473-12991545)
chr6 (40-114)||(34479905-34479979)
chr6 (51-84)||(13022128-13022161)
chr6 (52-145)||(21060658-21060751)
chr6 (52-145)||(21079975-21080068)
chr6 (41-89)||(9387422-9387470)
[»] chr1 (35 HSPs)
chr1 (17-127)||(9783199-9783310)
chr1 (38-160)||(16114534-16114656)
chr1 (56-168)||(21848358-21848470)
chr1 (17-113)||(24282782-24282879)
chr1 (17-117)||(26647575-26647676)
chr1 (31-142)||(23035153-23035264)
chr1 (313-390)||(10785844-10785922)
chr1 (52-158)||(15571944-15572050)
chr1 (34-142)||(15811682-15811790)
chr1 (11-100)||(7881587-7881678)
chr1 (39-142)||(12011426-12011529)
chr1 (41-160)||(20033362-20033481)
chr1 (17-142)||(15527015-15527141)
chr1 (44-118)||(15542556-15542630)
chr1 (31-121)||(44796890-44796980)
chr1 (31-143)||(25959692-25959803)
chr1 (41-115)||(13267623-13267697)
chr1 (41-115)||(21663335-21663409)
chr1 (51-140)||(17543369-17543458)
chr1 (31-158)||(16363358-16363485)
chr1 (52-158)||(16113267-16113373)
chr1 (52-158)||(18100031-18100137)
chr1 (40-110)||(27911848-27911918)
chr1 (52-121)||(33192124-33192193)
chr1 (49-109)||(15159041-15159101)
chr1 (31-75)||(22626388-22626432)
chr1 (33-121)||(35133657-35133745)
chr1 (52-122)||(16180490-16180560)
chr1 (41-115)||(21333312-21333386)
chr1 (39-121)||(26101632-26101714)
chr1 (41-86)||(14782337-14782382)
chr1 (39-100)||(16786336-16786397)
chr1 (41-113)||(9403120-9403192)
chr1 (44-76)||(9666869-9666901)
chr1 (54-121)||(17017090-17017155)
[»] scaffold0015 (1 HSPs)
scaffold0015 (31-121)||(202066-202156)
[»] scaffold0043 (1 HSPs)
scaffold0043 (31-158)||(88670-88797)
[»] scaffold1339 (1 HSPs)
scaffold1339 (92-254)||(927-1089)
[»] scaffold0451 (1 HSPs)
scaffold0451 (31-142)||(10326-10437)
[»] scaffold0062 (1 HSPs)
scaffold0062 (40-122)||(41778-41860)
[»] scaffold0024 (1 HSPs)
scaffold0024 (31-143)||(41089-41201)
[»] scaffold0386 (3 HSPs)
scaffold0386 (33-158)||(5071-5196)
scaffold0386 (17-117)||(9329-9431)
scaffold0386 (31-145)||(13709-13822)
[»] scaffold0111 (1 HSPs)
scaffold0111 (41-114)||(21256-21329)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-89)||(4629-4677)
[»] scaffold0360 (1 HSPs)
scaffold0360 (52-142)||(16721-16811)
[»] scaffold0086 (2 HSPs)
scaffold0086 (52-100)||(11887-11935)
scaffold0086 (41-160)||(13037-13156)
[»] scaffold0136 (1 HSPs)
scaffold0136 (52-158)||(14042-14148)
[»] scaffold0085 (1 HSPs)
scaffold0085 (41-74)||(23822-23855)
[»] scaffold0072 (1 HSPs)
scaffold0072 (41-165)||(38020-38144)
[»] scaffold0001 (1 HSPs)
scaffold0001 (126-182)||(392941-392997)


Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-171; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 11 - 497
Target Start/End: Original strand, 19784994 - 19785502
Alignment:
Q  11 aagcagagacatccgaagaatatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 110  Q
    ||||| ||||||  ||||| ||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  19784994 aagcaaagacatgtgaagattatgtggtcattgggaagatgaagaatgaagattcaagaggcctcataagactttacgacgggagaaattttgttcccaa 19785093  T
Q  111 gttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaattcgcactcatgcgccctggggatgaaacca 210  Q
     ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  19785094 attccaaggcaatttacatagaagcaaacacctaacaaggggaagaaacagacatttcggcacccggaattcgcactcatgcgccttggggatgaaacca 19785193  T
Q  211 cgtgct-ggaccatggagcaaccaggcacatgtgcctggcgcatgta---------------------ggcggtgtaagttgcaaggcacatgctcctcg 288  Q
     | ||| |||||||||||||||||||||||||| ||||||||||| |                     |||||||||||||||||||||||||| |||||    
T  19785194 tgcgcttggaccatggagcaaccaggcacatgtacctggcgcatggaaaggtgctccaggcgcatggaggcggtgtaagttgcaaggcacatgcgcctcg 19785293  T
Q  289 gggatgttctatgtaacaatccaatttaggattatatttatttaattgctttattaactatttaattgttggcgtgttatatttgttagttaattgggtt 388  Q
     ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  19785294 aggatgttctatgtaacaatccaatttaagattttatttatttaattgctttattaattatttaattgttggtgtgttatatttgttagttaattgggtt 19785393  T
Q  389 ttagagtaattaagtattttggtgtcgaggagtaagggtaatttagtcatttttgtgtgaagggtatttgaggagtttttcgtatggagagtaattaaga 488  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||     
T  19785394 ttagagtaattaagtattttggtatcgaggagtaagggtaatttagttatttttgtgtgaagggtatttgaggaatttttggtatggaaagtaattaagg 19785493  T
Q  489 aaattggta 497  Q
    |||||||||    
T  19785494 aaattggta 19785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 38 - 158
Target Start/End: Original strand, 30117899 - 30118017
Alignment:
Q  38 tccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaa 137  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||| |||||  ||| || || ||||||||||||||  |||||| ||| |||    
T  30117899 tccttgggaagatgaagaatgaagattcaagaggcctcaaaagactttgcaaagggag--attctgttctcaagttccaagacatcttacattgaagcaa 30117996  T
Q  138 acacctaacaaggcgaagaaa 158  Q
    |||||||| ||||| ||||||    
T  30117997 acacctaaaaaggcaaagaaa 30118017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 24381563 - 24381689
Alignment:
Q  34 gtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaa 133  Q
    |||||||||| |||||  ||||||||||||||||||| ||||| ||||| |||||| || || ||||||| |||||||||||||||||  ||||||| ||    
T  24381563 gtggtccttgcgaagatgaagaatgaagattcaagagtcctcagaagacattacaaaggaaggaattttgttcccaagttccaagacatcttacatataa 24381662  T
Q  134 tcaaacacctaacaaggcgaagaaaca 160  Q
      ||||||| || ||| | ||||||||    
T  24381663 gaaaacacccaaaaagacaaagaaaca 24381689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 14271719 - 14271614
Alignment:
Q  17 agacatccgaagaata-tgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| || |||||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||  ||||| |||| || || ||||||||    
T  14271719 agacatccgaagattaatgtggtccttggcaagacaaagattgaagattcaataggcctcagaagacgttacatagggaggaattatgttctcaagttcc 14271620  T
Q  116 aagaca 121  Q
    ||||||    
T  14271619 aagaca 14271614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 24380595 - 24380707
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||| |||| |  || |||| || |||||||||| ||||||  |||||||||| ||||    
T  24380595 ccttggtaagatgaagaatgaagattcaagaggcctcagaagacttcacaaagcaaggaattatgttcccaagttcaaagacatcttacatagaagcaaa 24380694  T
Q  139 cacctaacaaggc 151  Q
    ||||||| |||||    
T  24380695 cacctaaaaaggc 24380707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 22501712 - 22501609
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | |||| |||||||||||||| || | |||||||||||||||||||| ||||| |||||  ||||| |||| || |||||||||||    
T  22501712 agacatccgaagatttatgttgtccttgggaagacgaatattgaagattcaagaggcctcagaagacattacagagggaggaattctgttcccaagttcc 22501613  T
Q  116 aaga 119  Q
    ||||    
T  22501612 aaga 22501609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 7984957 - 7984851
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||| |||| || ||| |||||||||||||  |||||| |||  ||||| ||||  ||||    
T  7984957 aagaatgaagattcaagaggcatcataagactttacaatgggaggaattatgttccaaagttccaagacatcttacattgaagaaaacatctaaataggc 7984858  T
Q  152 gaagaaa 158  Q
    |||||||    
T  7984857 gaagaaa 7984851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 15176676 - 15176750
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||||    
T  15176676 ttgggaagacaaagaatgaagattcaagaggcctcaggagactttacatagggaggaattctgttcccaagttcc 15176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 15058745 - 15058822
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcca 116  Q
    ||||||||| |  |||||||||||||||||||| |||| ||||| ||||||  |||||||||||| ||||||||||||    
T  15058745 ccttgggaaaatgaagaatgaagattcaagaggtctcagaagacgttacaaatggagaaattttgttcccaagttcca 15058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 24518841 - 24518974
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 150  Q
    |||||||||||||| ||||||||||| ||||| |||||  | ||| ||||| | |||||||||||||||||  ||| || ||| |||||||| || |||     
T  24518841 aaagaatgaagatttaagaggcctcagaagacattacagagagaggaatttagttcccaagttccaagacatcttatatggaagcaaacacccaaaaaga 24518940  T
Q  151 cgaagaaacagacatttcggcacccgaaattcgc 184  Q
    |||| |||||  |||||| |||||| || |||||    
T  24518941 cgaaaaaacaagcatttcagcacccaaacttcgc 24518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 2638597 - 2638470
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | | |||| ||||||||| |  |||| ||||||||||||||||||||||||| |||||||  ||| ||||| || || ||||||||    
T  2638597 agacatccgaagatttacgtggaccttgggaatatgaagagtgaagattcaagaggcctcaaaagaatttacaaatggataaattctgttctcaagttcc 2638498  T
Q  116 aagacaatttacatagaatcaaacacct 143  Q
    || |||  |||||| |||  ||||||||    
T  2638497 aatacatcttacattgaagaaaacacct 2638470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 6886523 - 6886442
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||||| |||| | |||||||||||||| ||| ||||| ||| |  |||||||||| || |||||||||||||||||    
T  6886523 cttgggaagacgaagattaaagattcaagaggcatcataagacgttatagagggagaaattctgttcccaagttccaagaca 6886442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 30487701 - 30487580
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||||||||  ||||||||||||||||||||||||||||||  || ||  ||||  |||| |  |||||||||||||||||  ||| | | || ||||    
T  30487701 ccttgggaagatgaagaatgaagattcaagaggcctcaaaagatgttgcagagggatgaattctattcccaagttccaagacatcttatagataagcaaa 30487602  T
Q  139 cacctaacaaggcgaagaaaca 160  Q
    |||| || ||||| ||||||||    
T  30487601 cacccaaaaaggcaaagaaaca 30487580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 13313492 - 13313540
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  13313492 ttgggaagaccaagaatgaatattcaagagacctcaaaagactttacaa 13313540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 24091678 - 24091551
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||  |||||||||   |||||| |||||||||||||||| | | |||||||||| ||||| || | || |||| |||||||||||| ||||| |     
T  24091678 tatgtggatcttgggaagttgaagaataaagattcaagaggccttagatgactttacaaagggaggaactctgttccctagttccaagacattttacttt 24091579  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||| |  |||||||||||    
T  24091578 gaagaaaacacctcatcaggcgaagaaa 24091551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 24851178 - 24851296
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  | ||||||||||||||||| ||||| ||||| ||||||  ||| |||||||| ||||  || ||||||||  |||||| ||| ||||||    
T  24851178 ttgggaagatcatgaatgaagattcaagagacctcagaagacattacaaaaggataaattttgttcccgggtcccaagacatcttacatggaagcaaaca 24851277  T
Q  141 cctaacaaggcgaagaaaca 160  Q
    | ||| ||| ||||||||||    
T  24851278 cttaa-aagacgaagaaaca 24851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 28858689 - 28858630
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    |||||||||  ||||||||| |||||||||||||||||||| ||||| | ||||||||||    
T  28858689 ttgggaagatcaagaatgaatattcaagaggcctcaaaagattttacgaagggagaaatt 28858630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 17100450 - 17100523
Alignment:
Q  49 acaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    ||||||||||||||||||||||||||||  ||||||   || ||||| |||| |  ||||||||||||||||||    
T  17100450 acaaagaatgaagattcaagaggcctcacgagacttacaaatgggaggaattctattcccaagttccaagacaa 17100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 37527268 - 37527349
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||  ||||||||||||||||||||||| | ||||||||||    |||| ||||||| ||||||  ||||||||||    
T  37527268 ttgggaagatgaagaatgaagattcaagaggcctaagaagactttactcatggaggaattttgttcccaatgtccaagacaa 37527349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 4007407 - 4007443
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4007407 aagaatgaagattcaaggggcctcaaaagactttaca 4007443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 5856622 - 5856515
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||||||||||||||||||  || |  |||||  ||||||| | ||| |||||||||||||| ||  ||||||| || |||||||| || |||||    
T  5856622 aagaatgaagattcaagaggcctcggaacatgttacagagggagaattcttgttcccaagttccaagtcatcttacataaaagcaaacacccaa-aaggc 5856524  T
Q  152 gaagaaaca 160  Q
    |||| ||||    
T  5856523 gaagcaaca 5856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 19791236 - 19791188
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||| ||||    
T  19791236 aagaatgaagattcaataggcctcaaaagattttgcaacgggaggaatt 19791188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 21230775 - 21230735
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagactt 84  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  21230775 ggaagaccaagaatgaagattcaagaggcctcaagagactt 21230735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 23868074 - 23868121
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  23868074 ttgggaagaccaagaatgaagattcaagagggctcaggagactttaca 23868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 24091128 - 24091163
Alignment:
Q  49 acaaagaatgaagattcaagaggcctcaaaagactt 84  Q
    |||||||||||||||||||||||||||| |||||||    
T  24091128 acaaagaatgaagattcaagaggcctcagaagactt 24091163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 24389606 - 24389536
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctcccaagttc 114  Q
    ||||||| |||||||||||||||||||||||||  |||| ||||||| ||||| ||||||| | ||||||||    
T  24389606 ggaagaccaagaatgaagattcaagaggcctcaggagac-ttacaacagggagtaattttgtttccaagttc 24389536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 14076965 - 14076876
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||||||||||||||||| | || |  |||||| ||||| ||||| | | |||| ||||||||||  ||| |||||| ||||||    
T  14076965 aaagaatgaagattcaagaggccttagaaaatattacaaagggaggaatttcgttaccaaattccaagacatcttatatagaagcaaaca 14076876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 13833863 - 13833895
Alignment:
Q  57 tgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||||||||||||| ||||||||||||    
T  13833863 tgaagattcaagaggcctcataagactttacaa 13833895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 17891608 - 17891450
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||  |||| |||| || || ||||||||    
T  17891608 agacatccgaagatttatgtggtccttgggaagatgaagaatgaagattcaagaggcctcataagaatttacaaaaggaggaattatgttctcaagttcc 17891509  T
Q  116 aagacaatttacatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacc 174  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||  ||||| ||||||    
T  17891508 aagacaacttacatagaagcaaacacctaaaaaggcgaagaaacatgcattttggcacc 17891450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 27420926 - 27420806
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 139  Q
    ||||||||||  ||||||||||||||||| ||||||| ||||| |||||| || || || | || | |||||||||||||||  |||||||||| |||||    
T  27420926 cttgggaagatgaagaatgaagattcaagtggcctcagaagacattacaagggaaggaagtatgtttccaagttccaagacatcttacatagaagcaaac 27420827  T
Q  140 acctaacaaggcgaagaaaca 160  Q
    ||| || ||||||||||||||    
T  27420826 acccaaaaaggcgaagaaaca 27420806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 11464557 - 11464640
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||| |||| |  ||||||||||||||||||    
T  11464557 ccttgggaagatgaagaatgaagattcaagaggcctcaaaagacttaacaaagggaggaattctattcccaagttccaagacaa 11464640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 28930126 - 28930045
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||   |||| ||||||| ||||||||||||||||||    
T  28930126 ttgggaagaccaagaatgaatattcaagaggcctcagaagactttacagttggaggaattttgttcccaagttccaagacaa 28930045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 9962182 - 9962102
Alignment:
Q  323 tatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaag 402  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||| || ||||||||| |||||||| |||||||    
T  9962182 tatttatttaattgctttattaattatttaattgtttggcatgttatatttattggttaattggattttagagaaattaag 9962102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 25883575 - 25883702
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  |||||||| ||||||| || ||| |||||||||| ||  ||||| |||| || |||||||||||||||||  ||||||     
T  25883575 tatgtggtccttgggaagatgaagaatgacgattcaaaagacctaaaaagactttgcagagggaggaattatgttcccaagttccaagacatcttacatt 25883674  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||| | | ||||||||||    
T  25883675 gaagtaaacacctcaaagggcgaagaaa 25883702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45572641 - 45572727
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45572641 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45576308 - 45576394
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45576308 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45576394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45579975 - 45580061
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45579975 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45583642 - 45583728
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45583642 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45583728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45587309 - 45587395
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45587309 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45587395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45590976 - 45591062
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45590976 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45594643 - 45594729
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45594643 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45594729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45598310 - 45598396
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45598310 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45598396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45601977 - 45602063
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45601977 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45602063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45605644 - 45605730
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45605644 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45605730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45609311 - 45609397
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45609311 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45609397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45612978 - 45613064
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45612978 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45613064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 45616645 - 45616731
Alignment:
Q  71 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45616645 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 36191325 - 36191428
Alignment:
Q  55 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaa 154  Q
    ||||||||||||| |||| ||| |||||||||||| ||||| |||| || |  |||||||||||| || |||||| ||| ||||||||||| ||||| ||    
T  36191325 aatgaagattcaataggcttcataagactttacaaggggaggaattatgttttcaagttccaagataacttacattgaagcaaacacctaaaaaggcaaa 36191424  T
Q  155 gaaa 158  Q
    ||||    
T  36191425 gaaa 36191428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 22378071 - 22378147
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||  || || ||||||| | |||||||||    
T  22378071 ccttgggaagacaaagaatgaagattcaagaggcctcaggagaccttacataggaaggaattttgtttccaagttcc 22378147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 21905578 - 21905531
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21905578 ttgggaagacaaagaatgaagattcaagaggcctcaggagactttaca 21905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 29834708 - 29834638
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||||||| ||||||||||||||| |||||  |||| ||||||| |||||| |||||| ||||    
T  29834708 aagaatgaagattcaacaggcctcaaaagactctacaaatggaggaattttgttcccaaattccaacacaa 29834638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 34580016 - 34580086
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 109  Q
    |||||||||||  |||||||||||||||||| || ||| ||||||||||||||||| ||| |||| |||||    
T  34580016 ccttgggaagattaagaatgaagattcaagatgcatcataagactttacaacgggaaaaaatttggtccca 34580086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 34585765 - 34585835
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 109  Q
    |||||||||||  |||||||||||||||||| || ||| ||||||||||||||||| ||| |||| |||||    
T  34585765 ccttgggaagattaagaatgaagattcaagatgcatcataagactttacaacgggaaaaaatttggtccca 34585835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 18553175 - 18553070
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||| ||  |||||||||||||||||| || ||| |||||||||||  ||||  | || |  |||||||||||    
T  18553175 agacatccgaagatttatgtggtccttgggatgatgaagaatgaagattcaagaagcttcagaagactttacagagggatgacttctattcccaagttcc 18553076  T
Q  116 aagaca 121  Q
    ||||||    
T  18553075 aagaca 18553070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 24346309 - 24346390
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||| |||||||||||||||||| ||| ||||||||| ||||| ||||||  ||||||||| |  |||||||| ||||||||    
T  24346309 cttgagaagacaaagaatgaagactcatgaggcctcagaagacattacaaatggagaaattatattcccaagtcccaagaca 24346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 28766716 - 28766635
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||  || ||||||||||||||| | |||| |||||||||||| |||||||||| || ||||||  ||||||||||    
T  28766716 ttgggaagatgaacaatgaagattcaagatgtctcagaagactttacaatgggagaaattatgttcccaatatccaagacaa 28766635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 22627228 - 22627120
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    |||||||||||||||| |||||||| ||||  ||| |  ||||| ||||||  ||||||||||||||| |  ||||||||||  ||||||||||  ||||    
T  22627228 aagaatgaagattcaataggcctcataagatgttagagagggaggaatttttttcccaagttccaagatatcttacatagaagaaaacacctaaagaggc 22627129  T
Q  152 gaagaaaca 160  Q
     ||||||||    
T  22627128 aaagaaaca 22627120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 32086866 - 32086794
Alignment:
Q  55 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttac 127  Q
    |||||||||||||||||| | |  ||||||||||| ||||| |||| || ||||||||||||||||| |||||    
T  32086866 aatgaagattcaagaggctttaggagactttacaaagggaggaattatgttcccaagttccaagacattttac 32086794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 18120801 - 18120863
Alignment:
Q  50 caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 112  Q
    ||||||||||||||||||||||||||| |||||||   || ||||| ||||||| ||||||||    
T  18120801 caaagaatgaagattcaagaggcctcagaagacttacaaatgggaggaattttgttcccaagt 18120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 27907767 - 27907829
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 103  Q
    |||||||||| ||| |||||||||||||||||||||  ||||||||||  ||||| |||||||    
T  27907767 ttgggaagaccaaggatgaagattcaagaggcctcaggagactttacatagggaggaattttg 27907829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 29144486 - 29144441
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagacttta 86  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||    
T  29144486 ttgggaagacaaagaatgaagattcaagaggcatcaggagacttta 29144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 18758153 - 18758105
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||  |||||||||||||||||||||||||  |||||||||||    
T  18758153 ttgggaagaacaagaatgaagattcaagaggcctcaggagactttacaa 18758105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 32438928 - 32439004
Alignment:
Q  45 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||| | |||||||||||||||||||||||||| || |||||| ||||| |||| || || ||||| | ||||||    
T  32438928 gaagaccatgaatgaagattcaagaggcctcaaaaaacattacaaagggaggaattctgttcacaagtcctaagaca 32439004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 19198714 - 19198800
Alignment:
Q  34 gtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||||||||| |||||| |||||||||||||||||| |  |||| |||||  | ||| |||| || || ||||||||||||||    
T  19198714 gtggtccttgggaag-caaagattgaagattcaagaggccttacgagacgttacagagagaggaattatgttctcaagttccaagaca 19198800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 23010278 - 23010333
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagacttta 86  Q
    ||||| ||||||||||| |  || |||||||||||||||| |||||||||||||||    
T  23010278 tatgtagtccttgggaaaatgaaaaatgaagattcaagagtcctcaaaagacttta 23010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 29850874 - 29850795
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 118  Q
    |||||||||||   |||||||| |||||| |||| |   |||||||||||| ||||| ||||||| ||||||||||||||    
T  29850874 ccttgggaagatgtagaatgaaaattcaaaaggcatgtgaagactttacaaagggaggaattttgttcccaagttccaag 29850795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 20175667 - 20175618
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||| ||||||  |||||||| |||||||||||||||| |||||||||||    
T  20175667 ccttaggaagatcaagaatgatgattcaagaggcctcataagactttaca 20175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 17674235 - 17674306
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 113  Q
    ||||||| || |||||||||| |||||||||||| |  ||||||||||  ||||| ||||||| |||||||||    
T  17674235 ttgggaataccaagaatgaaggttcaagaggcct-atgagactttacatagggaggaattttgttcccaagtt 17674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 25537400 - 25537368
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactt 84  Q
    |||||| ||||||||||||||||||||||||||    
T  25537400 aagaataaagattcaagaggcctcaaaagactt 25537368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 26651875 - 26651919
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaaga 81  Q
    ||||||||||||| |||||||||| |||| |||||||||| ||||    
T  26651875 gtccttgggaagataaagaatgaatattctagaggcctcagaaga 26651919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 29032744 - 29032648
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttac 127  Q
    ||||||||| ||||||| |  ||||||||||||||||||||||  |  | ||||||||| ||||| |||| || ||  ||| ||||||||| |||||    
T  29032744 tatgtggtcattgggaaaatgaagaatgaagattcaagaggccaaaggacactttacaaagggaggaattctgttctgaagatccaagacattttac 29032648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 15171001 - 15171124
Alignment:
Q  35 tggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaat 134  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||||  |||||||||      
T  15171001 tggtccttgggaagatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattttgttcctaagttccaagacatcttacatagagg 15171100  T
Q  135 caaacacctaacaaggcgaagaaa 158  Q
    ||||||||||| ||||||||||||    
T  15171101 caaacacctaaaaaggcgaagaaa 15171124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 144854 - 144709
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagagg-cctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||| | ||||||||||||| ||||  ||||| |||||||||||| | ||||  |||||||| |||  |||| |||| || ||||||||||    
T  144854 agacatccgaagattcatgtggtccttggtaagatgaagaaagaagattcaagaagacctcggaagacttttcaaatggaggaattatgttcccaagttc 144755  T
Q  115 caagacaatttacatagaatcaaacacctaacaaggcgaagaaaca 160  Q
    ||||||||||||||||||| |||| |||||| ||||| ||||||||    
T  144754 caagacaatttacatagaagcaaatacctaaaaaggcaaagaaaca 144709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 163
Target Start/End: Complemental strand, 9501869 - 9501743
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |  |||||  ||||| |||| || | |||||| ||||||||  |||||||||| ||    
T  9501869 gtccttgggaagataaagaatgaagattcaagaggcctcaaaatatgttacagagggaggaattatgtttccaagtgccaagacatcttacatagaagca 9501770  T
Q  137 aacacctaacaaggcgaagaaacagac 163  Q
    ||||||||| |||| ||| ||| ||||    
T  9501769 aacacctaaaaaggtgaataaatagac 9501743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 401
Target Start/End: Complemental strand, 9260192 - 9260103
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaa 401  Q
    |||| |||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||||    
T  9260192 tttaagattttatttatttaattgctttattaattatttaattgtttggtgtgttatatttgttggttaattggattttagagaaattaa 9260103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 9310102 - 9310191
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaa 401  Q
    |||| |||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||||    
T  9310102 tttaagattttatttatttaattgctttattaattatttaattgtttggtgtgttatatttgttggttaattggattttagagaaattaa 9310191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 24751441 - 24751517
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 117  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| ||||||    
T  24751441 ttgggaagacaatgaatgaagattcaagaggcctcagaagacattacaaagggagaaattttgttcccaatttccaa 24751517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 1589100 - 1588973
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  |||||||||||||||| | |||||| |||||||||||   |||| |||| || |||||||||||||||||  ||||||     
T  1589100 tatgtggtccttgggaagatgaagaatgaagattcaacatgcctcagaagactttacagaaggaggaattatgttcccaagttccaagacatcttacatt 1589001  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||||  || |||||||||    
T  1589000 gaagaaaacacctataaaagcgaagaaa 1588973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 421 - 503
Target Start/End: Original strand, 20931544 - 20931626
Alignment:
Q  421 taagggtaatttagtcatttttgtgtgaagggtatttgaggagtttttcgtatggagagtaattaagaaaattggtaataact 503  Q
    ||||||||||||||||||||| ||||||| |||||||||| | ||||  |||||||||||||||||| ||||||||| |||||    
T  20931544 taagggtaatttagtcattttagtgtgaatggtatttgagtaattttgggtatggagagtaattaaggaaattggtagtaact 20931626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 21233945 - 21233837
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    |||||||||||||||||||| || |||||||||||||| | ||| | || || ||| |||||||||||||  || ||||||| ||||||||| | |||||    
T  21233945 aagaatgaagattcaagaggtcttaaaagactttacaaagcgaggagttatgttcctaagttccaagacatcttgcatagaagcaaacaccttagaaggc 21233846  T
Q  152 gaagaaaca 160  Q
    |||||||||    
T  21233845 gaagaaaca 21233837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 3736216 - 3736057
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||| ||||||  |||||||||||||||||||||||||  ||||| ||||  ||||| |||| || || ||| ||||    
T  3736216 agacatccgaagatttatgtggtccttaggaagatgaagaatgaagattcaagaggcctcaggagactatacagagggaggaattctgttctcaatttcc 3736117  T
Q  116 aagacaatttacatagaatcaaacacctaacaaggcgaag-aaacagacatttcggcacc 174  Q
    ||||||  |||||| |||  |||||||| |  |||| ||| ||||||||||||| |||||    
T  3736116 aagacatcttacattgaagaaaacacctcaacaggcaaagaaaacagacatttcagcacc 3736057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 8309956 - 8310067
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | |||||| |||||||||||  ||||||||||||||||||||||||| ||||||||| |  || || |||| || ||||| |||||    
T  8309956 agacatccgaagatttatgtggaccttgggaagatgaagaatgaagattcaagaggcctcataagactttagagaggaaggaattctgttcccatgttcc 8310055  T
Q  116 aagacaatttac 127  Q
    |||||| |||||    
T  8310056 aagacattttac 8310067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 9767647 - 9767520
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||| || ||||||  ||||||||||||||||||||| ||| |||||||||||  ||||| |||| || ||| |||||||||||||  |||||      
T  9767647 tatgtggtcattaggaagatgaagaatgaagattcaagaggcatcagaagactttacagggggaggaattatgttcctaagttccaagacatcttacaat 9767548  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||||| |||| |||||||    
T  9767547 gaacaaaacacctaaaaaggtgaagaaa 9767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 10418435 - 10418292
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaa-gacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||| | ||||||||||| |||| ||  |||| | |||||||||||| ||||| ||||||||||||  ||||||||| || ||||||||||    
T  10418435 agacatccgaagatttatgtggtcctttggaaagatgaagattcaagattcaagagacctcagaagactttacaaaaggagaaattatgttcccaagttc 10418336  T
Q  115 caagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||||  |||||  ||| ||||||| ||| ||| ||||||||    
T  10418335 caagacatcttacactgaagcaaacacttaaaaagacgaagaaa 10418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 20175947 - 20175821
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  | ||||||||||||||||||||||  |||||  ||||| ||||| |||| || ||||||||| |||||||  |||||| ||| ||||||    
T  20175947 ttgggaagatcatgaatgaagattcaagaggcctcggaagacaatacaaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 20175848  T
Q  141 cctaacaaggcgaagaaacagacattt 167  Q
    ||||| |||  ||||||||| ||||||    
T  20175847 cctaaaaagatgaagaaacatacattt 20175821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 20931473 - 20931547
Alignment:
Q  329 tttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagttaattgggttttagagtaattaag 402  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||| |||| |||||||||||| ||||||||    
T  20931473 tttaattgctttattaattatttaattgtttggtgtgttatatttgttggttagttgggttttagaataattaag 20931547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 9918020 - 9917939
Alignment:
Q  41 ttgggaaga-caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||| | |||| ||||||    
T  9918020 ttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagaca 9917939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 9925932 - 9925851
Alignment:
Q  41 ttgggaaga-caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||| | |||| ||||||    
T  9925932 ttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagaca 9925851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 13281971 - 13282052
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||| || | ||||||||||||||||||||||||||||  |||||| ||||| ||||||| |||||||| ||||||||    
T  13281971 cttgggaaaaccatgaatgaagattcaagaggcctcaaaagatattacaaagggaggaattttgttcccaagtcccaagaca 13282052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 7399215 - 7399072
Alignment:
Q  17 agacatccgaagaatatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcca 116  Q
    ||||||| ||||| || ||||||| || ||| || |||||| ||||||||||||||||   |||||||||| | ||||| |||| || ||||| ||||||    
T  7399215 agacatcagaagattacgtggtccatgagaaaacgaagaataaagattcaagaggcctatgaagactttacgaagggaggaattgtgttcccatgttcca 7399116  T
Q  117 agacaatttacatagaatcaaacacctaacaaggcgaagaaaca 160  Q
    ||| || |||||||||| || | |||  | ||||||||||||||    
T  7399115 agaaaacttacatagaagcagataccggaaaaggcgaagaaaca 7399072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 8317335 - 8317402
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 119  Q
    ||||||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||||||||||    
T  8317335 aagaatgaaaattcaagaggcctcaaaagactttatagagggataaattttgttcccaagttccaaga 8317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 10585428 - 10585511
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||  |||||||||||||||| ||| |||| |||||||||||| ||||| ||||||| ||| ||||| ||||||||    
T  10585428 ccttgggaagatgaagaatgaagattcaaaaggtctcagaagactttacaaagggaggaattttgttcctaagtttcaagacaa 10585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 15611282 - 15611401
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  || |||| || |||||||||||| ||||||| |||||  |||||||||| || |||||| ||||||||||  ||| |||||| ||||||    
T  15611282 ttgggaagatgaataatgtaggttcaagaggcctaaaaagacgttacagagggagaaattatgttcccaaattccaagacatcttatatagaagcaaaca 15611381  T
Q  141 cctaacaaggcgaagaaaca 160  Q
    || || |||| |||||||||    
T  15611382 cccaaaaaggtgaagaaaca 15611401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 19154699 - 19154588
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||| |||| | ||||||||| |||||||| ||||| |||||   ||||||||| || |||||||||| ||||||  ||||||     
T  19154699 tatgtggtccttgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacatt 19154600  T
Q  131 gaatcaaacacc 142  Q
    |||  |||||||    
T  19154599 gaagaaaacacc 19154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 20754098 - 20753987
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||| |||| | ||||||||| |||||||| ||||| |||||   ||||||||| || |||||||||| ||||||  ||||||     
T  20754098 tatgtggtccttgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacatt 20753999  T
Q  131 gaatcaaacacc 142  Q
    |||  |||||||    
T  20753998 gaagaaaacacc 20753987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 25692641 - 25692567
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||||  || |||||||||||||||||||||| |||||||||||| ||||| |||| || |||||||||||    
T  25692641 ttgggaagatcaaaaatgaagattcaagaggcctcagaagactttacaatgggaggaattatgttcccaagttcc 25692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 21428638 - 21428569
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||||||||||||||||||||||||||   |||| |||| |  |||||||||||||||||    
T  21428638 aagaatgaagattcaagaggcctcaaaagactttacagatggaggaattctattcccaagttccaagaca 21428569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 6039537 - 6039660
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    ||||||||||||| |||||||||||||||||||||||||| || || |||||  ||||  || | || |||| ||||| ||||||  |||||| ||| ||    
T  6039537 gtccttgggaagataaagaatgaagattcaagaggcctcataataccttacagagggacgaactatgttcccgagttctaagacatcttacattgaaaca 6039636  T
Q  137 aacacctaacaaggcgaagaaaca 160  Q
    ||||||| |  ||| |||||||||    
T  6039637 aacaccttaacaggtgaagaaaca 6039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 3585768 - 3585842
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||||| ||||| |||| || ||||| |||||    
T  3585768 ttgggaagaataagaatgaagattcaagaggtctcagaagactttacaatgggaggaattatgttcccatgttcc 3585842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 10611564 - 10611495
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 110  Q
    |||||||||| |||||| ||||||||||||| ||||  ||||||||||  ||||||||||||| ||||||    
T  10611564 ttgggaagactaagaataaagattcaagaggtctcatgagactttacatagggagaaattttgttcccaa 10611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 11804551 - 11804478
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||  || |||||||||| | ||||||||    
T  11804551 ttgggaagacaaagaatgaagattcaaaaggacttagaagactttacataggaagaaattttgtttccaagttc 11804478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 394
Target Start/End: Complemental strand, 20466497 - 20466416
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattgttggcgtgttatatttgttagttaattgggttttagag 394  Q
    ||||||||| |||||||||||||| |||||| |  |||| ||| |||| ||||||||||||||||||| |||| || |||||    
T  20466497 tttaggattttatttatttaattgttttatttaaaattttatttttggtgtgttatatttgttagttatttggattatagag 20466416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 5485482 - 5485360
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    |||||||| ||||  ||||||||||||| ||  || |||||||||| |||||  ||||  ||||||  |||||||||||||||||  |||||| ||| ||    
T  5485482 gtccttggaaagatgaagaatgaagatttaaatggtctcaaaagacgttacagagggaagaattttattcccaagttccaagacatcttacatggaagca 5485383  T
Q  137 aacacctaacaaggcgaagaaaca 160  Q
    |||||| || ||| ||||||||||    
T  5485382 aacacccaa-aagacgaagaaaca 5485360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 1810747 - 1810677
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||| ||||||||| |||||| || | ||||||| | |||||||| || |||||||||||||||||    
T  1810747 aaagaatgaggattcaagaagcctcataataatttacaaagagagaaattatgttcccaagttccaagaca 1810677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 23897093 - 23897039
Alignment:
Q  63 ttcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 117  Q
    |||||||||||||||||||||||| || ||||| |||| || |||||||||||||    
T  23897093 ttcaagaggcctcaaaagactttataaagggaggaattctgttcccaagttccaa 23897039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 6018220 - 6018168
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagact 83  Q
    |||||||||||| |||| |  ||||||||||| ||||||||||||||||||||    
T  6018220 tatgtggtccttaggaaaatgaagaatgaagagtcaagaggcctcaaaagact 6018168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 26249320 - 26249368
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||| ||||||||||||||||||||| |||  |||||||||||    
T  26249320 ttgggaagaccaagaatgaagattcaagaggcttcaggagactttacaa 26249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 3134887 - 3134962
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccc-aagttccaagacaattta 126  Q
    ||||||||||||||| ||||||||| ||||||| | || ||||| ||||||| |||| ||||||| || |||||||    
T  3134887 aagaatgaagattcaggaggcctcataagacttaataatgggaggaattttgttcccaaagttccgaggcaattta 3134962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 8052674 - 8052721
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||| || ||||||||||||| ||||||||| ||||||||||    
T  8052674 ttgggaagaccaaaaatgaagattcaacaggcctcaagagactttaca 8052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 9288764 - 9288662
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    ||||| |||||  |||||||||| |||||||||||||| |||||||||||  |||| || ||||| |||| || |||||||||  ||| || ||| ||||    
T  9288764 ccttgagaagatcaagaatgaaggttcaagaggcctcataagactttacagagggataagttttgttccc-aggtccaagacatcttatatggaagcaaa 9288666  T
Q  139 cacc 142  Q
    ||||    
T  9288665 cacc 9288662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 17831095 - 17831048
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  17831095 ttgggaagatcaagaatgaagattcaagaggcttcagaagactttaca 17831048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22748815 - 22748906
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgtt-agttaattgggttttagagtaattaag 402  Q
    ||||||||  ||||||||||||||||||||||  |||||||||| |||  ||||| || |||||  | |||||||||||||||| |||||||    
T  22748815 tttaggatattatttatttaattgctttattatttatttaattgtttgatgtgttttaattgttgggctaattgggttttagagaaattaag 22748906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 5221224 - 5221330
Alignment:
Q  53 agaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcg 152  Q
    |||||||||||||||||    ||| ||||| ||||||  |||| |||| || |||||||||||| | || ||||||||||| ||||||||  | |||||     
T  5221224 agaatgaagattcaagaaaattcataagacgttacaaatggaggaattctgttcccaagttccaggtcactttacatagaagcaaacacccgaaaaggca 5221323  T
Q  153 aagaaac 159  Q
    |||||||    
T  5221324 aagaaac 5221330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 9298556 - 9298486
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 109  Q
    ||||| |||||  |||||||||| |||||||||||||| |||||||||||  |||| || ||||| |||||    
T  9298556 ccttgagaagatcaagaatgaaggttcaagaggcctcataagactttacagagggataagttttgttccca 9298486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 10332257 - 10332195
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 103  Q
    |||||||||  ||||||||||||||||||||||| | || || |||||  |||||||||||||    
T  10332257 ttgggaagatcaagaatgaagattcaagaggccttagaacacgttacagagggagaaattttg 10332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 1254677 - 1254644
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcct 74  Q
    ||||||||||| ||||||||||||||||||||||    
T  1254677 ttgggaagacacagaatgaagattcaagaggcct 1254644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 3189557 - 3189662
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||| ||||||  |||| ||||   |||||||| || | |||||||||||  ||||  |||| || |||||||||||    
T  3189557 agacatccgaagatttatgtggtccttcggaagatgaagagtgaaaggtcaagaggtcttagaagactttacagagggatgaattatgttcccaagttcc 3189656  T
Q  116 aagaca 121  Q
    ||||||    
T  3189657 aagaca 3189662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 23298203 - 23298162
Alignment:
Q  43 gggaagacaaagaatgaagattcaagaggcctcaaaagactt 84  Q
    ||||||| ||| |||||||||||||||||||||| |||||||    
T  23298203 gggaagaaaaataatgaagattcaagaggcctcagaagactt 23298162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 4450522 - 4450487
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaa 77  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4450522 ttgggaagacaaa-aatgaagattcaagaggcctcaa 4450487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 14968855 - 14968903
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||||| | |||| ||||||||||||||| |||||| ||||||    
T  14968855 ttgggaagacaacggatgatgattcaagaggcctccaaagacattacaa 14968903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 15398331 - 15398379
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||||| | |||| ||||||||||||||| |||||| ||||||    
T  15398331 ttgggaagacaacggatgatgattcaagaggcctccaaagacattacaa 15398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 9849929 - 9850070
Alignment:
Q  19 acatccgaagaatatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccc-aagttccaa 117  Q
    |||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||| ||||| |||| || |||| |||||||||    
T  9849929 acatccaaagattatgtggtccttgggaagataaagaatgaaaattcaagaggtctcagaagactttacaaagggaggaattctgttcccaaagttccaa 9850028  T
Q  118 gacaatttacatagaatcaaacacctaacaaggcgaagaaac 159  Q
    ||||| |||||||||| ||||||||||| ||| | |||||||    
T  9850029 gacaacttacatagaaacaaacacctaaaaagacaaagaaac 9850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 25024983 - 25024843
Alignment:
Q  18 gacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcca 116  Q
    |||||||||||| | |||||||  | |||||||  |||||||||||||||||||||||||||||||||||||| ||||  || | || ||| ||||||||    
T  25024983 gacatccgaagatttatgtggttttcgggaagatgaagaatgaagattcaagaggcctcaaaagactttacaaagggaagaaatatgttccgaagttcca 25024884  T
Q  117 agacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||||| ||| |||||| ||||||||||| ||| ||||||||    
T  25024883 agacaacttatatagaagcaaacacctaa-aagacgaagaaa 25024843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 26114422 - 26114559
Alignment:
Q  19 acatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 117  Q
    ||||||||||| | |||||||||||   ||||  ||||||||||||||||||||||||||||||||||||||  |||  ||||||| |||||||||||||    
T  26114422 acatccgaagatttatgtggtccttaaaaagatgaagaatgaagattcaagaggcctcaaaagactttacaaatggatgaattttgttcccaagttccaa 26114521  T
Q  118 gacaatttacatagaatcaaacacctaacaaggcgaag 155  Q
    ||||  ||||| | || ||||||| ||| | |||||||    
T  26114522 gacatattacacaaaaacaaacacttaaaacggcgaag 26114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 16669963 - 16670083
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||||||||  |||||| ||||||||| |||||||| ||||| |||||| ||||| ||||||| |||||||||||| ||||  |||||||||| ||||    
T  16669963 ccttgggaagatgaagaattaagattcaaaaggcctcagaagacgttacaaagggaggaattttgttcccaagttccatgacatcttacatagaagcaaa 16670062  T
Q  139 cacctaacaaggcgaagaaac 159  Q
    ||||  | || ||||||||||    
T  16670063 cacccgaaaaagcgaagaaac 16670083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 17277695 - 17277619
Alignment:
Q  45 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||||||    
T  17277695 gaagataaagaatgaagactcaagaggcctcataagactttacaaagggaggaattttgttcccaagttccaagaca 17277619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 23083558 - 23083434
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    |||||||||||||  ||||||||||||||||||||||||  ||||| |||||  ||| ||||||||| | |||||||||||||||  ||||||| || ||    
T  23083558 gtccttgggaagatgaagaatgaagattcaagaggcctcggaagacgttacagagggtgaaattttgtttccaagttccaagacatcttacataaaaaca 23083459  T
Q  137 aacacctaacaaggcgaagaaacag 161  Q
    |||| | || ||||| |||||||||    
T  23083458 aacatccaaaaaggcaaagaaacag 23083434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 5691633 - 5691506
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||||||  | ||||||||||||||||||||  ||| ||||||||| ||| |||||||    
T  5691633 agacatccgaagatttatgtggtccttgggaagatgaagaatgaagatttgataggcctcaaaagactttacagagggggaaattttgttccaaagttcc 5691534  T
Q  116 aagacaatttacatagaatcaaacacct 143  Q
    || |||  |||||| |||  ||||||||    
T  5691533 aatacatcttacattgaagaaaacacct 5691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 22350464 - 22350563
Alignment:
Q  22 tccgaagaatatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||| ||| ||| |||||||||||| |||||||||  |||||||||||||| || ||||||||| ||||| || |||| |||||||||||||||||    
T  22350464 tccgaagattat-tgggccttgggaagacgaagaatgaacgttcaagaggcctcataatactttacaaagggaggaactttgttcccaagttccaagaca 22350562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 10236452 - 10236325
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||| |||||||||||  || ||||||||||||||| |||||| ||| |||||||| || || ||||||| || ||||||||||||||  ||||||     
T  10236452 tatgtggaccttgggaagatgaataatgaagattcaagatgcctcagaagtctttacaaaggaaggaattttgttctcaagttccaagacatcttacatt 10236353  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||| | ||||| ||||||    
T  10236352 gaagaaaacacctcaaaaggcaaagaaa 10236325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 19094124 - 19094019
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||| ||| ||||||  ||||||||||||||||||||||||| |||||||||||  ||||| ||||||  |  ||||||||    
T  19094124 agacatccgaagatttatgtggttcttaggaagatgaagaatgaagattcaagaggcctcataagactttacagagggaggaattttattaacaagttcc 19094025  T
Q  116 aagaca 121  Q
    ||||||    
T  19094024 aagaca 19094019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 8968316 - 8968390
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||  ||||| |||| || |||||||||||    
T  8968316 ttgggaagaccaagaatgaagattcaagagacctcagaagactttacagtgggaggaattatgttcccaagttcc 8968390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 16928776 - 16928702
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||||| || || | || ||||||||||||||    
T  16928776 ttggcaagaccaagaatgaagattcaagaggcctcagaagactttacaatggcaggagttatgctcccaagttcc 16928702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 15047626 - 15047525
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | ||||||| ||  | |||||||| ||||||||  ||| || ||| ||||||    
T  15047626 ttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaaca 15047527  T
Q  141 cc 142  Q
    ||    
T  15047526 cc 15047525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 15106798 - 15106899
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | ||||||| ||  | |||||||| ||||||||  ||| || ||| ||||||    
T  15106798 ttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaaca 15106897  T
Q  141 cc 142  Q
    ||    
T  15106898 cc 15106899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 22345915 - 22345852
Alignment:
Q  56 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 119  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||| ||||| |||||||||    
T  22345915 atgaagattcaagaggcctcataagacattacaaagggaggaattttgttcccatgttccaaga 22345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5685516 - 5685430
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatttt 102  Q
    ||||||||||||| | ||||||||||||| ||||  ||||| ||||||||||||| ||||| |||||||||||  ||||| ||||||    
T  5685516 agacatccgaagatttatgtggtccttggaaagatgaagaaagaagattcaagagacctcagaagactttacagagggagtaatttt 5685430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 15849073 - 15849163
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagttaattgggttttagagtaattaag 402  Q
    ||||||||| |||||||||||||| |||||  | |||||| ||||| || |||||||||||||| ||||||||| | |||||| |||||||    
T  15849073 tttaggattttatttatttaattggtttatgtattatttatttgtttggtgtgttatatttgttggttaattggatgttagagaaattaag 15849163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 19883722 - 19883802
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||  ||||||||| |||||| |||||| | |||||||||||  ||||||||||||| ||||| || ||||||||    
T  19883722 ttgggaagatcaagaatgaaaattcaacaggccttagaagactttacagagggagaaattttgttcccaggtcccaagaca 19883802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 11252372 - 11252419
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||    
T  11252372 ttgggaagacaaagaatgaatatacaagaggcctcaagagactttaca 11252419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 22527788 - 22527733
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctc 106  Q
    ||||||||||||||||||||||||||||| || |||||| ||||  ||||||||||    
T  22527788 aaagaatgaagattcaagaggcctcaaaatacgttacaaagggaagaattttgctc 22527733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 19927067 - 19927128
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    |||||||||||  ||||||||||||| ||||||||||| |||| ||||||| ||||| ||||    
T  19927067 ccttgggaagatgaagaatgaagatttaagaggcctcagaagattttacaaagggaggaatt 19927128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 11782318 - 11782258
Alignment:
Q  55 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||||||||||||  |||||||||| | |||| |||| || |||||||||||    
T  11782318 aatgaagattcaagaggcctcaggagactttacagctggaggaattatgttcccaagttcc 11782258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 9263562 - 9263621
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    |||||||||  ||||||||||||||||||| | ||| |||||||||||  ||||||||||    
T  9263562 ttgggaagatcaagaatgaagattcaagagtcatcataagactttacagagggagaaatt 9263621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 15166320 - 15166273
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  15166320 ttgggaagaccaagaatgaagattcaaaaggccccaatagactttaca 15166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 17711155 - 17711084
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||| |||||||||||||||||||||| ||  |||| |||||  ||||| |||| || |||||||||||    
T  17711155 ggaagaccaagaatgaagattcaagaggccccatgagacattacatagggaggaattatgttcccaagttcc 17711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 18447683 - 18447802
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  ||||| ||||||||||||||||| | || || |||||  |||||||||| || ||| | || ||||||||  ||| || ||| | ||||    
T  18447683 ttgggaagatcaagaaggaagattcaagaggccttagaaaacattacagagggagaaattatgttcctaggtcccaagacatcttatatggaagctaaca 18447782  T
Q  141 cctaacaaggcgaagaaaca 160  Q
    || |||||| ||||||||||    
T  18447783 cccaacaagacgaagaaaca 18447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 19547308 - 19547375
Alignment:
Q  54 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||||||||||||| ||  ||||| |||||| |||||||||| || || |||||| |||||||    
T  19547308 gaatgaagattcaagaggcgtcggaagacattacaaagggagaaattatgttctcaagtttcaagaca 19547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 12836304 - 12836370
Alignment:
Q  94 agaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaaca 160  Q
    |||||||||| ||||||||||| |||||  ||| |||||| |||||||| || ||| ||||||||||    
T  12836304 agaaattttgttcccaagttcctagacatcttatatagaagcaaacacccaaaaagacgaagaaaca 12836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 20828358 - 20828483
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||| ||||||||| ||||| |||| |||||||||||||||||||| || |  |||||  ||||| | || || |||||||||||    
T  20828358 agacatccgaagatttatgcggtccttgg-aagacgaagattgaagattcaagaggcctcataatatgttacagagggaggagttctgttcccaagttcc 20828456  T
Q  116 aagacaatttacatagaatcaaacacc 142  Q
    || |||  |||||| |||  |||||||    
T  20828457 aaaacatcttacattgaagaaaacacc 20828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 37741453 - 37741385
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctccc 108  Q
    |||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||| ||||||| ||||    
T  37741453 ccttgggaagacaa-gaatgaagattcaagaggccttagaagac-ttacaacagggaggaattttgttccc 37741385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 25096154 - 25096118
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctca 76  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25096154 ccttgggaagacaa-gaatgaagattcaagaggcctca 25096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 10108100 - 10108020
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||| | ||||||| || |||||||||||| || || |||||| ||||| |||| |  |||||||| ||||||||    
T  10108100 ttgggaagaccatgaatgaatatgcaagaggcctcagaaaacattacaaagggaggaattattttcccaagtcccaagaca 10108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 16714501 - 16714457
Alignment:
Q  45 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||| ||||||||||||||||||||||  ||||| ||||||    
T  16714501 gaagacaatgaatgaagattcaagaggcctctgaagacattacaa 16714457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 22217250 - 22217318
Alignment:
Q  54 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||||| |||||||  ||||| |||||| || || ||||||  |||||||| |||||||||    
T  22217250 gaatgaagattcaataggcctcgtaagacattacaaaggaaggaatttttttcccaagtcccaagacaa 22217318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 22470624 - 22470766
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||| ||||||||||  |||||||||||||||| |||||||| ||||||| |||| ||||| ||||||| ||||||||||     
T  22470624 agacatccgaagatttatgtggttcttgggaagatgaagaatgaagattcaataggcctcagaagacttcacaaagggaggaattttgttcccaagttcg 22470723  T
Q  116 aagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    ||||||  ||||| |||| ||||||||||| ||||||||||||    
T  22470724 aagacatcttacaaagaagcaaacacctaaaaaggcgaagaaa 22470766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 18735489 - 18735631
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||| ||||  ||||||||||||||||||| ||||| |||||||||||  ||||| |||| || |||||||||||    
T  18735489 agacatccgaagatttatgtggtccttggaaagaagaagaatgaagattcaagagccctcagaagactttacagagggaggaattctgttcccaagttcc 18735588  T
Q  116 aagacaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    ||||||  |||||| ||| |||||  ||||  |||||||||||    
T  18735589 aagacatcttacattgaagcaaaccactaaacaggcgaagaaa 18735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 8448661 - 8448520
Alignment:
Q  34 gtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaa 133  Q
    |||||| || |||||||||| |||||||||| ||||||||||||||||||||||||  | || |||| |  ||||||||||||||||||  |||  | ||    
T  8448661 gtggtcattaggaagacaaataatgaagatttaagaggcctcaaaagactttacaaacgaaggaattcttttcccaagttccaagacaacatacgcaaaa 8448562  T
Q  134 tcaaacacctaacaaggcgaagaaacagacatttcggcaccc 175  Q
     ||||||||||| ||||| ||||||||  |||||| ||||||    
T  8448561 gcaaacacctaaaaaggcaaagaaacaagcatttcagcaccc 8448520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 22246851 - 22246750
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 139  Q
    ||||||||||  ||||||||||||| ||||| ||||||||||||||||||  |||| |||| ||||||||| ||||||||||  |||||||||| |||||    
T  22246851 cttgggaagatgaagaatgaagatttaagagacctcaaaagactttacaaaaggaggaattctgctcccaaattccaagacatcttacatagaagcaaac 22246752  T
Q  140 ac 141  Q
    ||    
T  22246751 ac 22246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 20891877 - 20891967
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||| ||||| |||||  ||||||||||||||||||||||||| |||||||||||  || |||||||||| ||||||||| |||||||    
T  20891877 tatgtggaccttgtgaagatgaagaatgaagattcaagaggcctcagaagactttacagaggaagaaattttgttcccaagtttcaagaca 20891967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 5509932 - 5509844
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 119  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||  ||||| ||||||| || |||||| |||||    
T  5509932 tatgtggtccttgggaagacaaagattgacgattcaagaggcctcataagacgttacagagggaggaattttgttctcaagtttcaaga 5509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 13906817 - 13906900
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||| | ||||| |||| || ||||||||||    
T  13906817 tatgaggtccttgggaagataaagaatggagattcaagaggcctcataagactttactaagggaggaattatgttcccaagttc 13906900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 3114943 - 3115041
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacat 129  Q
    ||||| ||| |||||||||||||||   |||||||||||||||||| ||||| |||||  ||||| |||| || ||||||||||||||||| |||||||    
T  3114943 tatgttgtcattgggaagacaaagatataagattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacattttacat 3115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 820086 - 820190
Alignment:
Q  38 tccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaa 137  Q
    ||||||| ||||  |||||| |||||||||||||||||||||||| |||||  ||||| ||||||| ||| |||||||| ||||  ||||| |||| |||    
T  820086 tccttggaaagatgaagaattaagattcaagaggcctcaaaagacgttacagagggaggaattttgttccaaagttccatgacatcttacagagaagcaa 820185  T
Q  138 acacc 142  Q
    |||||    
T  820186 acacc 820190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 19388084 - 19388196
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||| ||||||||||  |||||||||| ||||| |||||||| |||||||||||   ||||||||| || ||||| |||||||||||  | ||||     
T  19388084 tatgtggtgcttgggaagattaagaatgaagcttcaataggcctcagaagactttacagaaggagaaattatgttcccatgttccaagacatctaacatt 19388183  T
Q  131 gaatcaaacacct 143  Q
    ||| |||||||||    
T  19388184 gaagcaaacacct 19388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 20886724 - 20886605
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    ||||| |||||  |||||||||||| |||||||||||| ||||| |||||| ||||  ||||||  |||||||||||||||||  ||| || ||| ||||    
T  20886724 ccttgagaagatgaagaatgaagatccaagaggcctcataagacattacaaagggattaattttattcccaagttccaagacatcttatatggaagcaaa 20886625  T
Q  139 cacctaacaaggcgaagaaa 158  Q
    ||||||| ||| | ||||||    
T  20886624 cacctaaaaagacaaagaaa 20886605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 17134954 - 17134818
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||| |   |||| |||| || ||||||| |||||||||  ||||||     
T  17134954 tatgtggtctttgggaagatgaagaatgaagattcaagaggcctcataagactttagagatggaggaattctgttcccaag-tccaagacatcttacatt 17134856  T
Q  131 gaatcaaacacctaacaaggcgaagaaacagacatttc 168  Q
    |||  |||||| |||  ||| |||||||| | ||||||    
T  17134855 gaagaaaacacttaaacaggggaagaaacgggcatttc 17134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 23054821 - 23054921
Alignment:
Q  42 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacac 141  Q
    ||||||||  ||||||||||||||||||||||||||||||  |||||| ||||| |||| || ||| |||| ||||||||  ||| || ||| |||||||    
T  23054821 tgggaagatcaagaatgaagattcaagaggcctcaaaagaaattacaaagggaggaattatgttcctaagtcccaagacatcttatatggaagcaaacac 23054920  T
Q  142 c 142  Q
    |    
T  23054921 c 23054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 34276685 - 34276765
Alignment:
Q  42 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||||  ||||| |||| || ||||||||||| ||||||    
T  34276685 tgggaagaccaagaatgaagagtcaagaggcctcaggagactttacagtgggaggaattctgttcccaagttccgagacaa 34276765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 3429465 - 3429536
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 110  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||||||||| ||||| ||| ||| ||||||    
T  3429465 ccttaggaagatgaagaatgaagattcaagagacctcaaaagactttacaaagggaggaatgttgttcccaa 3429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 28326375 - 28326494
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||||||||  ||||||||| |||||||| |||||| ||| |||||||  | ||| ||||||  |||||||||||||||||  ||| || ||| ||||    
T  28326375 ccttgggaagatgaagaatgaatattcaagatgcctcataaggctttacagagagaggaattttattcccaagttccaagacatcttatatggaagcaaa 28326474  T
Q  139 cacctaacaaggcgaagaaa 158  Q
    |||| || ||| ||||||||    
T  28326475 cacccaaaaagacgaagaaa 28326494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 31284538 - 31284621
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    ||||||||| |  ||||||||||||||||||||  ||||||||||||| |  |||||||||| || ||||| || |||||||||    
T  31284538 ccttgggaatatcaagaatgaagattcaagaggtttcaaaagactttaaagagggagaaattatgttcccaggtcccaagacaa 31284621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 11636217 - 11636265
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  11636217 ccttaggaagacaa-gaatgaagattcaagaggcctcagaagactttaca 11636265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 16242436 - 16242505
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 110  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||  ||||| |||| || ||||||    
T  16242436 ttgggaagaccaagaattaagattcaagaggcctcatgagactttacagtgggaggaattctgttcccaa 16242505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 18466941 - 18467042
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||| | |||  ||||||||||||| |||| ||||||||| || ||||| ||||||| |||||||| |||| |||  ||| || ||| ||||||    
T  18466941 ttgggaagactatgaacaaagattcaagaggactcagaagactttaaaaagggagtaattttgttcccaagtaccaaaacatcttatatggaagcaaaca 18467040  T
Q  141 cc 142  Q
    ||    
T  18467041 cc 18467042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 18747673 - 18747602
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 113  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||    
T  18747673 ttgggaagataaa-aatgaagattcaagaggcctcatgagactttacatggggaggaattctgttcccaagtt 18747602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 19912427 - 19912355
Alignment:
Q  45 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 117  Q
    |||||| ||||| ||||||||||||||||||  |||||||||||  ||||  ||||||| |||||| ||||||    
T  19912427 gaagaccaagaacgaagattcaagaggcctctgaagactttacatagggaagaattttgttcccaaattccaa 19912355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 23637465 - 23637386
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||  ||||||||||||||||| ||||||| ||||| ||| || ||||||||||||| ||||  || ||||||||    
T  23637465 ttgggaagatcaagaatgaagattcaagtggcctcataagacattagaa-gggagaaattttgttcccgggtcccaagaca 23637386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 18457362 - 18457397
Alignment:
Q  49 acaaagaatgaagattcaagaggcctcaaaagactt 84  Q
    |||||||||||||||||||||||| |||||||||||    
T  18457362 acaaagaatgaagattcaagaggcatcaaaagactt 18457397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 27853169 - 27853276
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 150  Q
    |||||||||||||||||||||||||| || || |||||  || || || | || || ||||||||||||||  ||| || ||| |||||||| || |||     
T  27853169 aaagaatgaagattcaagaggcctcagaatacgttacagaggtaggaaatatgttctcaagttccaagacatcttatatggaagcaaacacccaaaaaga 27853268  T
Q  151 cgaagaaa 158  Q
    ||||||||    
T  27853269 cgaagaaa 27853276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 2166280 - 2166354
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||  ||| ||||||||||||||||||||  || ||||||| ||| || |||| || |||||||||||    
T  2166280 ttgggaagaccgagagtgaagattcaagaggcctcatgagcctttacagcggaaggaattctgttcccaagttcc 2166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 16223354 - 16223264
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||| ||||| |||||||| |||| | |||||| ||||||||| | ||| | ||| |  | ||||||||||| |||||||||||||||||    
T  16223354 tatgttgtcctagggaagacgaagattaaagattaaagaggccttagaaggcgttatagagagagaaattttgttcccaagttccaagaca 16223264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 6075825 - 6075789
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctca 76  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6075825 cttgggaagatgaagaatgaagattcaagaggcctca 6075789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 20431306 - 20431238
Alignment:
Q  58 gaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaattta 126  Q
    ||||||||||||||| |||  ||||||||||  ||||| |||| || ||||||||||| || |||||||    
T  20431306 gaagattcaagaggcgtcatgagactttacagtgggaggaattatgttcccaagttccgagtcaattta 20431238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 26315075 - 26314955
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 139  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||| || ||||||||||| || ||    
T  26315075 cttgggaagatgaagaatgaagattcaagaggcctcataagactttacaaagggagaaattttgttcctaagttccaaggcattttacatagaagcagac 26314976  T
Q  140 acctaacaaggcgaagaaaca 160  Q
    |||||| ||  ||||||||||    
T  26314975 acctaaaaaaacgaagaaaca 26314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 17469780 - 17469918
Alignment:
Q  20 catccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 118  Q
    |||||||||||| |||||||||||| |||||  || |||||||||||||||||||||| |||||||||||| ||||| |||| || ||||||| ||||||    
T  17469780 catccgaagaattatgtggtccttgagaagatgaaaaatgaagattcaagaggcctcataagactttacaaagggaggaattatgttcccaag-tccaag 17469878  T
Q  119 acaatttacatagaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  || || | || ||||||||||| ||||||||||||    
T  17469879 acatcttgcagaaaaacaaacacctaaaaaggcgaagaaa 17469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 24261910 - 24261791
Alignment:
Q  56 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaag 155  Q
    ||||||||||||||||||||| |||||||||||| |||||  ||| |  ||||||||| ||||| || |||||||||| ||||||||||| |||||||||    
T  24261910 atgaagattcaagaggcctcataagactttacaaagggaggtattctaatcccaagtttcaagaaaacttacatagaagcaaacacctaaaaaggcgaag 24261811  T
Q  156 aaacagacatttcggcaccc 175  Q
    |||||  |||||| ||||||    
T  24261810 aaacaagcatttcagcaccc 24261791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 24188745 - 24188615
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    |||| ||||||||  ||||||||||||||||||||| ||| ||||| |||||   ||||||||| || |||||||||| || |||  ||||||| || ||    
T  24188745 gtccatgggaagatgaagaatgaagattcaagaggcttcagaagacgttacatatggagaaattatgttcccaagttcgaacacatcttacatataagca 24188646  T
Q  137 aacacctaacaaggcgaagaaacagacattt 167  Q
    ||||||||| |||||||||||||| ||||||    
T  24188645 aacacctaaaaaggcgaagaaacatacattt 24188615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 18939398 - 18939294
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||| |||||||||| |||| |||||||||||| || |||||||||||| |||| |||||||  ||||||||| |    
T  18939398 agacatccgaagatttatgtggtccttggaaagacaaagattgaatattcaagaggccccagaagactttacaaagggacaaattttattcccaagtttc 18939299  T
Q  116 aagac 120  Q
    |||||    
T  18939298 aagac 18939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 26122250 - 26122142
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||||||||||||||  ||| |||||||||  | || || |||| || ||||||||||||||| || |||||||||| ||||||||||| |||||    
T  26122250 aagaatgaagattcaagaggtgtcagaagactttatgaaggaaggaattatgttcccaagttccaagaaaaattacatagaaacaaacacctaaaaaggc 26122151  T
Q  152 gaagaaaca 160  Q
    |||||||||    
T  26122150 gaagaaaca 26122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 24162224 - 24162374
Alignment:
Q  11 aagcagagacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaaga-ggcctcaaaagactttacaacgggagaaattttgctccc 108  Q
    ||||| ||||||||||||| | | |||||| |||  ||||  |||||||||||||||||| ||||||| || |||||| || ||||| ||||| | ||||    
T  24162224 aagcaaagacatccgaagatttacgtggtcattgtaaagatgaagaatgaagattcaagaaggcctcagaaaactttaaaa-gggaggaatttcgttccc 24162322  T
Q  109 aagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaaca 160  Q
    |||||||||||||| |||||||| | ||||||||||| |||| |||||||||    
T  24162323 aagttccaagacaacttacataggagcaaacacctaaaaaggtgaagaaaca 24162374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 24265513 - 24265603
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||| |  |||||  ||||||||||| |||| |||||||| |||||||||||| ||||| ||||||| || ||||||||||||||    
T  24265513 tatgtggtccatatgaagatgaagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagaca 24265603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 24342144 - 24342234
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||| |  |||||  ||||||||||| |||| |||||||| |||||||||||| ||||| ||||||| || ||||||||||||||    
T  24342144 tatgtggtccatatgaagatgaagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagaca 24342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 18227465 - 18227385
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||  ||||||||||||||||||| ||||| ||| | |||||  |||||||||| || |||||||||||||||||    
T  18227465 ttgggaagattaagaatgaagattcaagagacctcataaggcattacagagggagaaattatgttcccaagttccaagaca 18227385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 18832098 - 18831974
Alignment:
Q  19 acatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 117  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||||||| ||||| ||||   ||||| |||| || |  ||||||||||    
T  18832098 acatccgaagatttatgtcgtccttgggaagacgaagattgaagattcaagaggcctcagaagacgttacggagggaggaattatgttatcaagttccaa 18831999  T
Q  118 gacaatttacatagaatcaaacacc 142  Q
    ||||  |||||| |||  |||||||    
T  18831998 gacatcttacattgaagaaaacacc 18831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 24658547 - 24658591
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  24658547 ggaagacaaagaatgaagattcaagaggcctcaagagactttaca 24658591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 19761820 - 19761943
Alignment:
Q  37 gtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatca 136  Q
    |||||||||||||  ||||| ||| ||||||||||||||| ||||| |||||  ||||| |||| || ||||||||||||| |||   ||| ||||| ||    
T  19761820 gtccttgggaagatgaagaaagaatattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaaaacatcatacttagaagca 19761919  T
Q  137 aacacctaacaaggcgaagaaaca 160  Q
    |||||| || ||||| || |||||    
T  19761920 aacacccaaaaaggcaaataaaca 19761943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 23266667 - 23266560
Alignment:
Q  53 agaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcg 152  Q
    ||||||||||||||||| |||| | ||||| |||||| ||||  |||| || |||||||||||||||||  ||| |||||| |||||||| || |||  |    
T  23266667 agaatgaagattcaagatgccttagaagaccttacaaggggaagaattatgttcccaagttccaagacatcttatatagaaacaaacacccaaaaagatg 23266568  T
Q  153 aagaaaca 160  Q
    ||||||||    
T  23266567 aagaaaca 23266560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 23338793 - 23338731
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 103  Q
    |||||||||| ||||||||||||||||||| |||||  ||||||||||| ||||| |||||||    
T  23338793 ttgggaagaccaagaatgaagattcaagagtcctcaggagactttacaatgggaggaattttg 23338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 28254741 - 28254628
Alignment:
Q  54 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcga 153  Q
    |||||||||||||| |||||||| ||||| ||||||  |||| |||| || ||  |||||||||||||  |||||| ||| |||||||| || |||  ||    
T  28254741 gaatgaagattcaaaaggcctcataagacattacaaatggaggaattatgttcagaagttccaagacatcttacatggaagcaaacaccaaaaaagatga 28254642  T
Q  154 agaaacagacattt 167  Q
    ||||||| ||||||    
T  28254641 agaaacaaacattt 28254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 23387791 - 23387839
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  23387791 ttgggaagacaaagagtgaagattcaagaggcctcaatagacttaacaa 23387839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 24849782 - 24849850
Alignment:
Q  91 gggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaac 159  Q
    ||||| |||| || ||||||||| |||||||  |||||||||| ||||||||||| |||||||||||||    
T  24849782 gggaggaattatgttcccaagtttcaagacatcttacatagaagcaaacacctaaaaaggcgaagaaac 24849850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 34488719 - 34488607
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  || ||||||||||||  ||||| || || |||||| |  || ||||||| || |||||||||||||||||  ||||||     
T  34488719 tatgtggtccttgggaagatgaataatgaagattcacaaggccacataaaactttatagaggcagaaattatgttcccaagttccaagacatcttacatt 34488620  T
Q  131 gaatcaaacacct 143  Q
    ||  |||||||||    
T  34488619 gacgcaaacacct 34488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 26253313 - 26253190
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 150  Q
    |||||||||||||||||||| ||||| ||||  |||||  ||||| |||  || |||||||||  ||||||  ||| || |||  |||||||||| |||     
T  26253313 aaagaatgaagattcaagagccctcagaagatattacagagggaggaatgatgttcccaagttataagacatcttatatggaagtaaacacctaaaaaga 26253214  T
Q  151 cgaagaaacagacatttcggcacc 174  Q
    |||||||||| ||||||| |||||    
T  26253213 cgaagaaacatacatttcagcacc 26253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 20860189 - 20860147
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagacttta 86  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20860189 ggaagacaaagaatgaagattcaagaggcctcaggagacttta 20860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 24263985 - 24264035
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaaga 81  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  24263985 tatgtggtccttgggaagatgaagaatgaagatttaagaggcctcagaaga 24264035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 24340615 - 24340665
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaaga 81  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  24340615 tatgtggtccttgggaagatgaagaatgaagatttaagaggcctcagaaga 24340665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 25572704 - 25572798
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaa 133  Q
    |||||||||||  ||||| |||||||||||||| |||  ||||| |||||| ||||| |||| || ||||||||  ||||||| ||||| |||||    
T  25572704 ccttgggaagatgaagaaggaagattcaagaggtctcggaagacattacaaagggaggaattatgttcccaagtctcaagacactttacgtagaa 25572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 25920687 - 25920617
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 109  Q
    |||||||| ||  ||||||||||||||||||| ||||| |||||||||||  |||||||||| || |||||    
T  25920687 ccttgggatgatcaagaatgaagattcaagagacctcataagactttacagagggagaaattatgttccca 25920617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 19052951 - 19052919
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctca 76  Q
    |||||||||||||||||||||||||||||||||    
T  19052951 ggaagacaaagaatgaagattcaagaggcctca 19052919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 20532752 - 20532800
Alignment:
Q  64 tcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 112  Q
    ||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  20532752 tcaagaggcctcacaagacattacaaagggagaaattttgttcccaagt 20532800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 394
Target Start/End: Complemental strand, 18767942 - 18767859
Alignment:
Q  313 tttaggattatatttatttaattg-ctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagag 394  Q
    ||||||||| ||||||||||||||  |||||||| |||||||||| |||| |||| ||||||||| |||| |||  ||||||||    
T  18767942 tttaggattttatttatttaattgtttttattaattatttaattgtttggtgtgtaatatttgttggttatttgaattttagag 18767859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 28666344 - 28666297
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    |||||||||||||||||||| ||||||||||||||   ||||||||||    
T  28666344 ttgggaagacaaagaatgaacattcaagaggcctcgggagactttaca 28666297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 29987808 - 29987734
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||||| || |||||||||||||||| |||||  ||||||||||  ||||| |||| || ||| |||||||    
T  29987808 ttgggaagaccaaaaatgaagattcaagagacctcatgagactttacagtgggaggaattatgttcctaagttcc 29987734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 24320768 - 24320801
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcct 74  Q
    |||||||||| |||||||||||||||||||||||    
T  24320768 ttgggaagaccaagaatgaagattcaagaggcct 24320801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 23032530 - 23032482
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||||||||| ||||||||||||||||| ||||  ||||| ||||||    
T  23032530 ttgggaagacaacgaatgaagattcaagagacctctgaagacattacaa 23032482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 23644552 - 23644690
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||| ||||||  ||||| ||||||||||||||| ||| |||||||||  | || || |||| || ||||||||||||||| || |||||||    
T  23644552 tatgtggtccttaggaagatgaagaaggaagattcaagaggcatcataagactttaagaaggtaggaattctgttcccaagttccaagaaaacttacata 23644651  T
Q  131 gaatcaaacacctaacaaggcgaagaaacagacatttcg 169  Q
    ||| ||||||||||| ||| ||||||||||| |||||||    
T  23644652 gaagcaaacacctaaaaagacgaagaaacaggcatttcg 23644690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 9898102 - 9898229
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| |||| ||||||| || || ||||||  || ||||||||||||||  ||||||     
T  9898102 tatgtggtccttgggaagatgaagaataaagattcaagaggcctcagaagaatttacaaaggaaggaattttattctcaagttccaagacatcttacatt 9898201  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    ||| ||||||||||  ||||||||||||    
T  9898202 gaagcaaacacctataaaggcgaagaaa 9898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 8246489 - 8246377
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||  |||| ||||| || ||||||||||||||||| || ||||     
T  8246489 tatgtggtccttgggaagatgaagaatgaagattcaagaggcctcggaagactttacagagggacaaattatgttcccaagttccaagacatttcacatt 8246390  T
Q  131 gaatcaaacacct 143  Q
    |||  ||||||||    
T  8246389 gaaaaaaacacct 8246377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 22564769 - 22564928
Alignment:
Q  17 agacatccgaagaatatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcca 116  Q
    ||||||| || || |||||||||||||||||    ||||||||||||||||||||||    || ||||||  | ||||||||| ||| || |||||||||    
T  22564769 agacatctgaggattatgtggtccttgggaaag--aagaatgaagattcaagaggccaaggaacactttatgaagggagaaatattgttcacaagttcca 22564866  T
Q  117 agacaatttacatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaa 179  Q
    |||||| |||||||||| |||||| || |||||| |||||||||| |||||| ||||||||||    
T  22564867 agacaacttacatagaagcaaacatct-acaaggtgaagaaacaggcatttcagcacccgaaa 22564928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 19246139 - 19246012
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||||||||  |||||||||||||||||||| |||  || ||||||||| | ||||||||||| |||| |||| |||||||  |||||      
T  19246139 tatgtggtccttgggaagatgaagaatgaagattcaagaggtctcggaaaactttacaaagagagaaattttgttccctagtttcaagacatcttacaat 19246040  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    |||  |||||||| |  |||||||||||    
T  19246039 gaagaaaacacctcaataggcgaagaaa 19246012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 3357985 - 3357915
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||    
T  3357985 aaagaatgaagattcaaagggcctcaaaagacattacaaagggaggaattttgttcccaagttccaagaca 3357915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 22404498 - 22404575
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 118  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||  ||||| ||||||| ||||||||| ||||    
T  22404498 ttgggaagaccaagaatgaagattcaagaggcctcaggagactttacagtgggaggaattttgttcccaagtttcaag 22404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 6629219 - 6629298
Alignment:
Q  42 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||| ||||| |||| |  ||||||  |||||||||    
T  6629219 tgggaagatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattatattcccaatgtccaagaca 6629298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 8038293 - 8038376
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||  ||||||||||||||||||||||||| |||| ||||||  |||||||| | || ||||| ||| ||||||||    
T  8038293 ccttgggaagatcaagaatgaagattcaagaggcctcataagattttacagagggagaaaatatgttcccaggtttcaagacaa 8038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 16449644 - 16449519
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagtta-attgggttttagagtaattaag--tatttt 408  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||| ||||| || | || |||||||||||||| || ||||  ||||||    
T  16449644 tttaggattttatttatttaattgctttattaattatttaattgtttggtatgttttatttattgggtagattgggttttagagaaaataagggtatttt 16449545  T
Q  409 ggtg--tcgaggagtaagggtaattt 432  Q
    |||   | ||||||||||||||||||    
T  16449544 ggtaatttgaggagtaagggtaattt 16449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 22569733 - 22569607
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | |||||| |||||||||||  ||||| ||||||||||||||||| |||| |||||| ||    ||||||| || |||||||||||    
T  22569733 agacatccgaagatttatgtggaccttgggaagatgaagaacgaagattcaagaggcct-aaaaaactttaaaaatttagaaattatgttcccaagttcc 22569635  T
Q  116 aagacaatttacatagaatcaaacacct 143  Q
    ||||||  |||||| |||  ||||||||    
T  22569634 aagacatcttacattgaagaaaacacct 22569607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 32759824 - 32759690
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||||||||  | || |||||||||||||||||||  ||||| |||||| ||||| ||||||| ||||| || ||||||||  ||| || ||| ||||    
T  32759824 ccttgggaagatcatgagtgaagattcaagaggcctcggaagacgttacaaagggaggaattttgttcccaggtcccaagacatcttatatggaagcaaa 32759725  T
Q  139 cacctaacaaggcgaagaaacagacatttcggcac 173  Q
    |||| || ||  ||||||||||  ||||| |||||    
T  32759724 cacccaagaaaacgaagaaacatgcatttaggcac 32759690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 10822077 - 10822010
Alignment:
Q  54 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||| |||||||||||||| |||||| || || |||| || |||||||| ||||||||    
T  10822077 gaatgaagattcaaaaggcctcaaaagacattacaaaggaaggaattatgttcccaagtcccaagaca 10822010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 23005521 - 23005580
Alignment:
Q  55 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||||||||||||||||||||   || ||||| ||||||| ||||||||||    
T  23005521 aatgaagattcaagaggcctcaaaagacttacaaatgggaggaattttgttcccaagttc 23005580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 23782845 - 23782786
Alignment:
Q  55 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||||||||||||||||||||   || ||||| ||||||| ||||||||||    
T  23782845 aatgaagattcaagaggcctcaaaagacttacaaatgggaggaattttgttcccaagttc 23782786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 21547028 - 21547082
Alignment:
Q  58 gaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 112  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||    
T  21547028 gaagattcaagaggcctcaaaagacattacaaagggaggaattttgttcgcaagt 21547082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21687363 - 21687453
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||||||||  |||||||||||| ||||| |||| |  ||||| ||||  ||||| |||| || |||||| ||||||||||    
T  21687363 tatgtggtccttgggaagatgaagaatgaagatacaagatgccttaggagactctacagagggaggaattatgttcccaatttccaagaca 21687453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 13216548 - 13216609
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    ||||||||||   ||||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  13216548 ccttgggaaggtcaagaatgaagattcaagaggcatcataaaactttacaaagggagaaatt 13216609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 17295932 - 17295989
Alignment:
Q  43 gggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    |||||||  ||||||||||||||||||||||||| ||||||||| |  ||||||||||    
T  17295932 gggaagattaagaatgaagattcaagaggcctcataagactttaaagtgggagaaatt 17295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 75
Target Start/End: Complemental strand, 14639140 - 14639109
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctc 75  Q
    ||||||||||||||||||||||||||||||||    
T  14639140 ggaagacaaagaatgaagattcaagaggcctc 14639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 21845942 - 21845989
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 88  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||||||    
T  21845942 ttgggaagacaaagaataaagattcaagaggccttaggagactttaca 21845989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 2588150 - 2588069
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||| ||||||  ||||||||||||||||||||||||| || |||||| ||  |||||||||||  ||||| || ||||||||    
T  2588150 ccttaggaagatcaagaatgaagattcaagaggcctcagaaaactttataa-aggagaaattttattcccatgtcccaagaca 2588069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 8066504 - 8066450
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggag 95  Q
    |||||||||| ||||||||||||||||||| ||||   ||||||||||| |||||    
T  8066504 ttgggaagaccaagaatgaagattcaagagacctcgtgagactttacaatgggag 8066450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 12991545 - 12991473
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctcccaagt 112  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||| |||| || ||||||||    
T  12991545 ccttaggaagacaa-gaatgaagattcaagaggcctcagaagac-ttacaacagggaggaattatgttcccaagt 12991473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 34479979 - 34479905
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||| | ||||||| ||||||||||||||||| ||  |||||| ||||| |||| || ||||| ||||    
T  34479979 cttgggaagaccatgaatgaatattcaagaggcctcaaacgatattacaaagggaggaattatgttcccatgttc 34479905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 13022161 - 13022128
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactt 84  Q
    |||||||||||||||||||||||||| |||||||    
T  13022161 aaagaatgaagattcaagaggcctcagaagactt 13022128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 21060658 - 21060751
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaa 145  Q
    ||||||||||||||||||||||||| ||||  |||||   ||||||||| |  |||||||  ||||||||  ||| || ||| |||||||||||    
T  21060658 aagaatgaagattcaagaggcctcagaagatgttacagaaggagaaattattttcccaagggccaagacatcttatatggaagcaaacacctaa 21060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 21079975 - 21080068
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaa 145  Q
    ||||||||||||||||||||||| | ||||  |||||   ||||||||| |  |||||||| ||||||||  ||| || ||| |||||||||||    
T  21079975 aagaatgaagattcaagaggcctaagaagatgttacagaaggagaaattattttcccaagtgccaagacatcttatatggaagcaaacacctaa 21080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 9387470 - 9387422
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    |||||| ||||| ||||| ||||||||||||||||| ||||| ||||||    
T  9387470 ttgggatgacaatgaatgtagattcaagaggcctcagaagacattacaa 9387422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 9783199 - 9783310
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||||||  || ||||||| |||||||||||||| |||||||||||  ||||| ||||||| |||||||||||    
T  9783199 agacatccgaagatttatgtggtccttgggaagatgaaaaatgaaggttcaagaggcctcataagactttacagagggaggaattttgttcccaagttcc 9783298  T
Q  116 aagacaatttac 127  Q
    |||||| |||||    
T  9783299 aagacattttac 9783310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 16114656 - 16114534
Alignment:
Q  38 tccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaa 137  Q
    ||||||||||||  ||||||||||||||||||||||| | |||||||||||| ||||| | ||||| |||||||||||||||||  |||||| |||  ||    
T  16114656 tccttgggaagatgaagaatgaagattcaagaggccttagaagactttacaaagggagtatttttgttcccaagttccaagacatcttacattgaagtaa 16114557  T
Q  138 acacctaacaaggcgaagaaaca 160  Q
    |||| ||| |||| |||||||||    
T  16114556 acacttaaaaaggtgaagaaaca 16114534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 21848470 - 21848358
Alignment:
Q  56 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaag 155  Q
    |||||||||||||| ||||||||||||||||||| ||| | ||||||| |||||||||||||| ||| ||||| | || |||| || | | |||||||||    
T  21848470 atgaagattcaagatgcctcaaaagactttacaaagggtggaattttgttcccaagttccaaggcaacttacacataagcaaatacttgaaaaggcgaag 21848371  T
Q  156 aaacagacatttc 168  Q
    |||||||||||||    
T  21848370 aaacagacatttc 21848358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 24282879 - 24282782
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 113  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||| ||||| |||| || |||||||||    
T  24282879 agacatccgaagatttatgtggtccttgggaagatgaagaatgaatattcaagaggcctcataagactttacaaagggaggaattatgttcccaagtt 24282782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 26647575 - 26647676
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||||||| |||| | |||||||||||||||||| ||||| |||||  ||||| ||||||| ||||| |||||    
T  26647575 agacatccgaagatttatgtggtccttgggaagacgaagattcaagattcaagaggcctcataagacgttacagagggaggaattttgttcccatgttcc 26647674  T
Q  116 aa 117  Q
    ||    
T  26647675 aa 26647676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 23035153 - 23035264
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||| |||||||||||| | ||||||||||| |||||| ||||| ||||||  |||| |||| || |||||||||||||||||  ||||||     
T  23035153 tatgtggtccttaggaagacaaagattcaagattcaagatgcctcataagacgttacaaaaggaggaattatgttcccaagttccaagacatcttacatt 23035252  T
Q  131 gaatcaaacacc 142  Q
    |||  |||||||    
T  23035253 gaagaaaacacc 23035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 10785844 - 10785922
Alignment:
Q  313 tttaggattatatttatttaattgctttattaactatttaattgt-tggcgtgttatatttgttagttaattgggtttt 390  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||| |||||||    
T  10785844 tttagaattttatttatttaattgctttattaattatttaattgtatggtgtgttatatttgttggttaatggggtttt 10785922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 15571944 - 15572050
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||||||||||||||| |||||||| ||||||  ||||| |||| || |||||||||| ||||||  |||||| |||  |||||||| || ||||    
T  15571944 aagaatgaagattcaagaggcatcaaaagagtttacacagggaggaattctgttcccaagttcgaagacatcttacattgaagaaaacacctcaccaggc 15572043  T
Q  152 gaagaaa 158  Q
    |||||||    
T  15572044 gaagaaa 15572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 15811682 - 15811790
Alignment:
Q  34 gtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaa 133  Q
    ||||||||||||||||| |||| |||||||| ||||||||||| ||||| |||||  ||| | |||| || |||||||||||||||||  |||||| |||    
T  15811682 gtggtccttgggaagacgaagattgaagatttaagaggcctcataagacgttacagagggtggaattatgttcccaagttccaagacatcttacattgaa 15811781  T
Q  134 tcaaacacc 142  Q
      |||||||    
T  15811782 ggaaacacc 15811790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 7881678 - 7881587
Alignment:
Q  11 aagcagagacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaag-aggcctcaaaagactttacaacgggagaaatt 100  Q
    ||||| ||||||| ||||| | |||||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||| ||||| ||||    
T  7881678 aagcaaagacatctgaagatttatgtggtccttgagaagataaagaatgaagattcaagaaggcctcataagactttacaaagggaggaatt 7881587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 12011426 - 12011529
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaa 138  Q
    |||||||||||  |||||||||||||||| ||||||||||||||||||||  || || ||||||| || || || ||||||||| ||| || ||| ||||    
T  12011426 ccttgggaagatcaagaatgaagattcaataggcctcaaaagactttacagaggaaggaattttgttctcaggtcccaagacaacttatatggaagcaaa 12011525  T
Q  139 cacc 142  Q
    ||||    
T  12011526 cacc 12011529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 20033362 - 20033481
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||| | ||||||||||||||||||||||| ||||| || ||| |||||||||| || || ||||| ||||||||  ||| ||  || ||||||    
T  20033362 ttgggaagaccatgaatgaagattcaagaggcctcagaagacatttcaaagggagaaattatgttctcaagtcccaagacatcttatattaaagcaaaca 20033461  T
Q  141 cctaacaaggcgaagaaaca 160  Q
    || || ||| ||||||||||    
T  20033462 cccaaaaagacgaagaaaca 20033481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 15527015 - 15527141
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    ||||||||||||| | ||||||||||||||||||| |||| | |||| |||||||| ||||  |||| |||||  ||||| |||| || |||||||||||    
T  15527015 agacatccgaagatttatgtggtccttgggaagacgaagattaaagactcaagaggtctcagcagacgttacagagggaggaattatgttcccaagttcc 15527114  T
Q  116 aagacaatttacatagaatcaaacacc 142  Q
    ||| || ||||||| |||  |||||||    
T  15527115 aagtcattttacattgaagaaaacacc 15527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 15542556 - 15542630
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 118  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||  ||||| | || || ||||||||||||||    
T  15542556 ggaagaccaagaatgaagattcaagaggcctcaagagactttacatagggaggacttatgttcccaagttccaag 15542630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 44796980 - 44796890
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||||||||| ||||   | |||||||||||||||| ||||| |||||  ||||| |||| || |||||||||||||||||    
T  44796980 tatgtggtccttgggaagacgaagatcaatgattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagaca 44796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 25959692 - 25959803
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||| || ||||| |||| |  || |||||| |||||||  ||||||     
T  25959692 tatgtggtcattgggaagatgaagaatgaagattcaagaggcct-aaaagactttataaagggaggaattcttttctcaagtttcaagacatcttacatt 25959790  T
Q  131 gaatcaaacacct 143  Q
    |||  ||||||||    
T  25959791 gaagaaaacacct 25959803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 13267697 - 13267623
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||  ||||  ||||||| |||||||||||    
T  13267697 ttgggaagaccaagaataaagattcaagaggcctcatgagactttacagtgggaagaattttgttcccaagttcc 13267623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 21663335 - 21663409
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||| ||||| |||||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||||    
T  21663335 ttggcaagaccaagaatgaagattcaagaggcctcacgagactttacatagggaggaattctgttcccaagttcc 21663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 17543369 - 17543458
Alignment:
Q  51 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    ||||||||||||||||| ||| |||| | ||| |||||  ||||  ||||||| |||||||||||||||||  |||||||||| ||||||    
T  17543369 aaagaatgaagattcaataggtctcagacgacgttacagagggatgaattttgttcccaagttccaagacatcttacatagaaacaaaca 17543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 16363485 - 16363358
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||| | |||||||  |||||||||||||| | |||||| | |||||||||||  |||||||||| |  ||||||||||||| |||  |||||      
T  16363485 tatgtggtcatagggaagattaagaatgaagattctataggccttagaagactttacagagggagaaattcttttcccaagttccaatacatcttacaat 16363386  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    ||| ||||||| | | ||||||| ||||    
T  16363385 gaagcaaacacattaaaaggcgaggaaa 16363358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 16113373 - 16113267
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||| |||||| |||||||| |||| ||||||| ||||| ||||||| || |||||||||  ||| ||||| | |||  |||||||| |  ||||    
T  16113373 aagaatgaatattcaataggcctcagaagaatttacaaagggaggaattttgttctcaagttccagtacattttactttgaagaaaacacctcaacaggc 16113274  T
Q  152 gaagaaa 158  Q
    |||||||    
T  16113273 gaagaaa 16113267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 18100031 - 18100137
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    ||||||||||||||||||| |||    ||||||||||| ||||  |||| | |||||||||||||||||| ||||| | |||  |||||||| |  ||||    
T  18100031 aagaatgaagattcaagagccctatgtagactttacaaagggaagaattctcctcccaagttccaagacattttactttgaagaaaacacctcaacaggc 18100130  T
Q  152 gaagaaa 158  Q
    |||||||    
T  18100131 gaagaaa 18100137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 27911918 - 27911848
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 110  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||||   ||| ||||||| ||||||    
T  27911918 cttgggaagaccatgaatgaagattcaagaggcctcagaagacattacaaacagaggaattttgttcccaa 27911848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 33192193 - 33192124
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||| | ||||||  ||||||||||||||||||| ||||| |||| || |||||||||| ||||||    
T  33192193 aagaatgagggttcaagtcgcctcaaaagactttacaaagggaggaattctgttcccaagttctaagaca 33192124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 15159041 - 15159101
Alignment:
Q  49 acaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 109  Q
    ||||||||||||||||||||| ||||||||||||||   || ||||| ||||||| |||||    
T  15159041 acaaagaatgaagattcaagaagcctcaaaagacttacaaatgggaggaattttgttccca 15159101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 22626388 - 22626432
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctc 75  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||    
T  22626388 tatgtggtccttgggaagacgaagattgaagattcaaggggcctc 22626432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 35133745 - 35133657
Alignment:
Q  33 tgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||  ||||  |||| |||| ||||||||||||||| ||||| |||||| |||   |||| || |||||||||||||||||    
T  35133745 tgtggtccttgaaaagaagaagattgaatattcaagaggcctcagaagacgttacaaagggtagaattatgttcccaagttccaagaca 35133657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 16180560 - 16180490
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||||||||| |||| |||| ||||||||||  ||||| ||||||| || |||||| | ||||||    
T  16180560 aagaatgaagattcaaaaggcatcaagagactttacatagggaggaattttgttctcaagtttcgagacaa 16180490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 21333312 - 21333386
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 115  Q
    |||||||| | ||||||| ||||||||||||||||   |||||||||| | |||| |||| || |||||||||||    
T  21333312 ttgggaaggccaagaatggagattcaagaggcctcgtgagactttacatcaggaggaattctgttcccaagttcc 21333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 26101714 - 26101632
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||| |  |||||||||||||||||||| |||| |||| ||||||  |||||||||| || || || || ||||||||    
T  26101714 ccttgggaatatcaagaatgaagattcaagaggtctcataagaatttacagagggagaaattctgttcacaggtcccaagaca 26101632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 14782382 - 14782337
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagacttta 86  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  14782382 ttgggaagaccaagaatgaagattcaaaaggcctcaggagacttta 14782337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 16786336 - 16786397
Alignment:
Q  39 ccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    ||||||||| |  |||||||||||||||| || ||||| |||||||||||  ||||||||||    
T  16786336 ccttgggaatatcaagaatgaagattcaaaagacctcataagactttacagagggagaaatt 16786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 9403192 - 9403120
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 113  Q
    |||||||||| |||||| ||||||||||||| ||||  ||||||||||  ||||| |||| || ||| |||||    
T  9403192 ttgggaagaccaagaattaagattcaagaggtctcaggagactttacagtgggaggaattatgttccaaagtt 9403120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 9666869 - 9666901
Alignment:
Q  44 ggaagacaaagaatgaagattcaagaggcctca 76  Q
    |||||| ||||||||||||||||||||||||||    
T  9666869 ggaagataaagaatgaagattcaagaggcctca 9666901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 17017090 - 17017155
Alignment:
Q  54 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    |||||||||||||||||| ||  |||||| |||||| ||||| ||||||  |||||||| ||||||||    
T  17017090 gaatgaagattcaagaggtcttgaaagacattacaaagggaggaatttt--tcccaagtcccaagaca 17017155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 202066 - 202156
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 121  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||  ||||| ||||||| |||||||||||||||||    
T  202066 tatgtggtccttgggaagacaaagattgaagattcaataggcctccaaagacattacagagggaggaattttgttcccaagttccaagaca 202156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 88670 - 88797
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    |||||||||||||| || |  |||||||||||||||| || ||||| |||||||||||  |||||||||| || |||||||||||||||||  ||||||     
T  88670 tatgtggtccttggaaataagaagaatgaagattcaaaagccctcagaagactttacagagggagaaattatgttcccaagttccaagacatcttacatt 88769  T
Q  131 gaatcaaacacctaacaaggcgaagaaa 158  Q
    ||| |||||| ||||  |||||||||||    
T  88770 gaagcaaacaactaaacaggcgaagaaa 88797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 1089 - 927
Alignment:
Q  92 ggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaattcgcactcatg 191  Q
    ||||||||| || ||||||||| |||||||| |||||||||| ||||| ||||| || ||||||||| || | |||| |||||||||| ||   | ||||    
T  1089 ggagaaattatgttcccaagtttcaagacaacttacatagaaacaaacgcctaaaaatgcgaagaaa-aggcgtttcagcacccgaaagtcaggcccatg 991  T
Q  192 cgccctggggatgaaaccacgtgc-tggaccatggagcaaccaggcacatgtgcctggcgcatg 254  Q
    | ||| |||||| |||||| |||| | || ||||||||||||||||||||| ||||| ||||||    
T  990 caccccggggattaaaccaagtgcctcgagcatggagcaaccaggcacatgcgcctgacgcatg 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 10326 - 10437
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||||||| |||| ||||| |||| |  ||||||||||||| |||  ||||||     
T  10326 tatgtggtcctcgggaagatgaagaatgaagattcaagaggcctcaaaagacttcacaaagggaggaattatattcccaagttccaaaacatcttacatt 10425  T
Q  131 gaatcaaacacc 142  Q
    |||  |||||||    
T  10426 gaagaaaacacc 10437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 41778 - 41860
Alignment:
Q  40 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 122  Q
    |||||||||| |||||||||||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||  ||||||||||    
T  41778 cttgggaagataaagaatgaagattcaagaggcctaataagaatttacaaagggaggaattttgttcccaatgtccaagacaa 41860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 41201 - 41089
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||| |||||||||||  ||||||| ||||||||||||||||| ||||||||||||  |||| ||||||| ||  ||||| |||||||  ||||||     
T  41201 tatgtggaccttgggaagatgaagaatggagattcaagaggcctcataagactttacaaaaggaggaattttgttctaaagtttcaagacatcttacatt 41102  T
Q  131 gaatcaaacacct 143  Q
    |||  ||||||||    
T  41101 gaagaaaacacct 41089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 5071 - 5196
Alignment:
Q  33 tgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacataga 132  Q
    |||||||||||||||||  |||||  || ||||||||||||||| |||||||||||  ||||| ||||||  |||| |||||||| |||  |||||| ||    
T  5071 tgtggtccttgggaagatgaagaagcaaaattcaagaggcctcagaagactttacagagggaggaatttttttccctagttccaatacatcttacattga 5170  T
Q  133 atcaaacacctaacaaggcgaagaaa 158  Q
    |  |||||||| |  |||||||||||    
T  5171 agaaaacacctcaagaggcgaagaaa 5196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 9329 - 9431
Alignment:
Q  17 agacatccgaagaat-atgtggtccttgggaagacaaagaatgaagattc-aagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    ||||||||||||| | ||||| ||||||||||||  || || ||| |||  |||||||||||||||| ||||||  ||||||||||||| ||||||||||    
T  9329 agacatccgaagatttatgtgttccttgggaagaagaaaaaggaaaattttaagaggcctcaaaagattttacagagggagaaattttgttcccaagttc 9428  T
Q  115 caa 117  Q
    |||    
T  9429 caa 9431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 13709 - 13822
Alignment:
Q  31 tatgtggtccttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacata 130  Q
    ||||||||||||| |||||  ||||| ||| ||||||||||| ||| ||||||||||||  |||| || |||| ||||||||| ||| |||  ||||||     
T  13709 tatgtggtccttgagaagatgaagaaggaaaattcaagaggcatcagaagactttacaaatggaggaa-tttgttcccaagtttcaatacatcttacatt 13807  T
Q  131 gaatcaaacacctaa 145  Q
    |||  ||||||||||    
T  13808 gaagaaaacacctaa 13822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 21329 - 21256
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 114  Q
    |||| ||||| |||||||||||| ||||||||||||  ||||||||||  ||||| ||||||| ||||||||||    
T  21329 ttggaaagaccaagaatgaagatacaagaggcctcaggagactttacagtgggaggaattttgttcccaagttc 21256  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 4677 - 4629
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 89  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  4677 ttgggaagacaaagagtgaagattcaagaggcctcaatagacttaacaa 4629  T

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Target: scaffold0360 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 16721 - 16811
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 142  Q
    ||||||||||||||||||||||||| || |  |||||  ||||||| | ||| |||||||||||||| ||  ||||||| || ||||||||    
T  16721 aagaatgaagattcaagaggcctcagaacatgttacagagggagaattcttgttcccaagttccaagtcatcttacataaaagcaaacacc 16811  T

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Target: scaffold0086 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 11935 - 11887
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 100  Q
    ||||||||||||||||||||| ||||||||| |||||  ||||||||||    
T  11935 aagaatgaagattcaagaggcatcaaaagacgttacagagggagaaatt 11887  T

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Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 13037 - 13156
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  | ||||||||||||||||||||||  |||   |||||| |||||||||| || || ||||| | ||||||  ||| || ||| ||||||    
T  13037 ttgggaagatcatgaatgaagattcaagaggcctcggaaggaattacaaagggagaaattatgttctcaagtcctaagacaccttatatggaagcaaaca 13136  T
Q  141 cctaacaaggcgaagaaaca 160  Q
    || || ||| ||||||||||    
T  13137 cccaaaaagacgaagaaaca 13156  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 14042 - 14148
Alignment:
Q  52 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 151  Q
    |||||| ||||||||||||||||||||| || |||||| ||||  |||| |  || ||||||||||||||  ||| ||  || |||||||| || ||| |    
T  14042 aagaatcaagattcaagaggcctcaaaatacgttacaaagggattaattctcttctcaagttccaagacatcttatatgaaagcaaacacccaaaaagac 14141  T
Q  152 gaagaaa 158  Q
    |||||||    
T  14142 gaagaaa 14148  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 23855 - 23822
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcct 74  Q
    |||||||||||| |||||||||||||||||||||    
T  23855 ttgggaagacaatgaatgaagattcaagaggcct 23822  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 38144 - 38020
Alignment:
Q  41 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 140  Q
    |||||||||  | ||||||||| | ||||||||||||||||  ||| |  ||||||||||||| ||||| || ||||||||  ||| || | | ||||||    
T  38144 ttgggaagatcatgaatgaagaattaagaggcctcaaaagatattatagagggagaaattttggtcccaggtcccaagacatcttatatggtagcaaaca 38045  T
Q  141 cctaacaaggcgaagaaacagacat 165  Q
    || || | | ||| |||||||||||    
T  38044 cccaaaaggacgaggaaacagacat 38020  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 392997 - 392941
Alignment:
Q  126 acatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaattc 182  Q
    |||||||| ||||||||||| ||||| ||||||||| | ||| |||||||| |||||    
T  392997 acatagaagcaaacacctaaaaaggcaaagaaacaggcgttttggcacccggaattc 392941  T

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